Citrus Sinensis ID: 024572

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MQLGVSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSVS
Secondary Structure (PSIPRED)
cccccccHHHHHHHcccccHHHHHHHHHHHcccccccccccccccccccccccEEcccccccccccccccccccccccccccHHcccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHcEEEEccccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccccEEEEEcccEEEEccccccccccccHHHHcHHHHHcccccccccEEEHHHHEEHHHHccccccccccccHHHHHHHHHHHEEEccccccccccHHHHHHHHHHHHccccccccHHHHHccccEccccccccccccHHHHHHHccccHccccHHHHHHHHHHHccccccccccccEcHHHHHcccccccccccHHHHHHHHHHHHccccccEEcc
Coil and Loop (DISEMBL)
MQLGVSSLSEFVMlegsvkmkpdiffSSLSQQICHRDLKLentlldgspaprlkicdfgyskssllhsrpkstvgtpayiapevlsrreydgkladVWSCGVTLYVMLVgaypfedqedpknFRKTISRIMAVQykipdyvhiSQDCRNLLSRIfvanpsrritikeikshpwflknlpRELTETAQAIYYrkenptfslqSVEEITKIVEeakvpppvsrsiggfgwggeedgdekeeetdadeedEYEKTVKEAQQSGEVSVS
Flexible Loop (DISEMBL)
MQLGVSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSsllhsrpkstvgtpayiapevlSRREYDGKLADVWSCGVTLYVMLVGAypfedqedpkNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIfvanpsrritikeikshpwflknlPRELTETAQAIYYRKENPTFSLQSVEEITKIveeakvpppvsrsiggfgwggeedgdEKEEEtdadeedeyeKTVKeaqqsgevsvs
Low Complexity Region (SEG)
MQLGVSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSIggfgwggeedgdekeeetdadeedeyeKTVKEAQQSGEVSVS
Disordered region (IsUnstruct)
**********FVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH*****TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVE******************************************************
Disordered Region (DISOPRED)
MQLGVSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE******************VEEIT**********************************************************
Disordered Region (DISEMBL)
MQLGVSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSIGGFGWG************************************
Disordered Region (DISPRO)
****VSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENP***LQSVEEITKIVEEAKVP********GFGW**EEDGDEKEEETDADEEDEYEKTVKEAQQSGEVS**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQLGVSSLSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q9C958	361	Serine/threonine-protein	yes	no	0.890	0.653	0.796	1e-107
P43291	363	Serine/threonine-protein	no	no	0.890	0.650	0.810	1e-106
Q7XQP4	359	Serine/threonine-protein	yes	no	0.883	0.651	0.743	1e-101
Q6ZI44	365	Serine/threonine-protein	no	no	0.773	0.561	0.806	1e-99
Q9FFP9	360	Serine/threonine-protein	no	no	0.743	0.547	0.822	3e-95
Q5N942	360	Serine/threonine-protein	no	no	0.867	0.638	0.732	5e-95
Q7XKA8	370	Serine/threonine-protein	no	no	0.890	0.637	0.692	6e-95
P43292	353	Serine/threonine-protein	no	no	0.871	0.654	0.748	9e-93
O64812	339	Serine/threonine-protein	no	no	0.818	0.640	0.714	1e-87
P0C5D6	334	Serine/threonine-protein	no	no	0.822	0.652	0.677	1e-81

>sp|Q9C958|SRK2B_ARATH Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1

 Score =  387 bits (993), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/246 (79%), Positives = 211/246 (85%), Gaps = 10/246 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS PKSTVGTPAYIAPEVLSR E
Sbjct: 116 AMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSMPKSTVGTPAYIAPEVLSRGE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFEDQEDPKNF+KTI RIMAV+YKIPDYVHISQDC++
Sbjct: 176 YDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFKKTIQRIMAVKYKIPDYVHISQDCKH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFV N ++RITI +IK HPWFLKNLPRELTE AQA Y+RKENPTFSLQSVEEI KI
Sbjct: 236 LLSRIFVTNSNKRITIGDIKKHPWFLKNLPRELTEIAQAAYFRKENPTFSLQSVEEIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDG---------DEKEEETDADEEDEYEKTVKEAQQS- 259
           VEEAK P  VSRSIG FGWGG ED          + +E E + DEEDEY+KTVK+   S 
Sbjct: 296 VEEAKTPARVSRSIGAFGWGGGEDAEGKEEDAEEEVEEVEEEEDEEDEYDKTVKQVHASM 355

Query: 260 GEVSVS 265
           GEV VS
Sbjct: 356 GEVRVS 361

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|P43291|SRK2A_ARATH Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1

 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/248 (81%), Positives = 214/248 (86%), Gaps = 12/248 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 AMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI +IMAVQYKIPDYVHISQDC+N
Sbjct: 176 YDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIQKIMAVQYKIPDYVHISQDCKN 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVAN  +RITI EIK H WFLKNLPRELTETAQA Y++KENPTFSLQ+VEEI KI
Sbjct: 236 LLSRIFVANSLKRITIAEIKKHSWFLKNLPRELTETAQAAYFKKENPTFSLQTVEEIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEK------------EEETDADEEDEYEKTVKEAQ 257
           V +AK PPPVSRSIGGFGWGG  D D K            E E + D+EDEY+KTVKE  
Sbjct: 296 VADAKTPPPVSRSIGGFGWGGNGDADGKEEDAEDVEEEEEEVEEEEDDEDEYDKTVKEVH 355

Query: 258 QSGEVSVS 265
            SGEV +S
Sbjct: 356 ASGEVRIS 363

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7XQP4|SAPK7_ORYSJ Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/242 (74%), Positives = 208/242 (85%), Gaps = 8/242 (3%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS+PKSTVGTPAYIAPEVLSRREYD
Sbjct: 118 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSKPKSTVGTPAYIAPEVLSRREYD 177

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           GK ADVWSCGVTLYVMLVGAYPFED +DPKNFRKTI RIM++QYKIP+YVH+SQDCR LL
Sbjct: 178 GKTADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIMSIQYKIPEYVHVSQDCRQLL 237

Query: 152 SRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKEN--PTFSLQSVEEITKI 209
           SRIFVANP++RITI+EI++HPWFLKNLPRELTE AQA+YY+K+N  PT+S+QSVEEI KI
Sbjct: 238 SRIFVANPAKRITIREIRNHPWFLKNLPRELTEAAQAMYYKKDNSAPTYSVQSVEEIMKI 297

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEE------TDADEEDEYEKTVKEAQQSGEVS 263
           VEEA+ PP  S  + GFGW  E++ ++  ++       + D EDEY+K VK+   SGE  
Sbjct: 298 VEEARTPPRSSTPVAGFGWQEEDEQEDNSKKPEEEQEEEEDAEDEYDKQVKQVHASGEFQ 357

Query: 264 VS 265
           +S
Sbjct: 358 LS 359

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6ZI44|SAPK6_ORYSJ Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1

 Score =  362 bits (929), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 167/207 (80%), Positives = 189/207 (91%), Gaps = 2/207 (0%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS+PKSTVGTPAYIAPEVLSRREYD
Sbjct: 118 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSKPKSTVGTPAYIAPEVLSRREYD 177

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           GK+ADVWSCGVTLYVMLVGAYPFED +DPKNFRKTI RI+++QYKIP+YVHISQDCR LL
Sbjct: 178 GKMADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIVSIQYKIPEYVHISQDCRQLL 237

Query: 152 SRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENP--TFSLQSVEEITKI 209
           SRIFVANP++RITI+EI++HPWF+KNLPRELTE AQA YY+K+N   TFS Q+V+EI KI
Sbjct: 238 SRIFVANPAKRITIREIRNHPWFMKNLPRELTEAAQAKYYKKDNSARTFSDQTVDEIMKI 297

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDE 236
           V+EAK PPP S  + GFGW  EE+ ++
Sbjct: 298 VQEAKTPPPSSTPVAGFGWTEEEEQED 324

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FFP9|SRK2H_ARATH Serine/threonine-protein kinase SRK2H OS=Arabidopsis thaliana GN=SRK2H PE=1 SV=1

 Score =  348 bits (893), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 162/197 (82%), Positives = 178/197 (90%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAP LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK ADVWSCGVTLYVMLVG YPFED +DP+NFRKTI RIMAVQYKIPDYVHISQ+CR+
Sbjct: 176 YDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFV N ++RIT+KEIK HPW+LKNLP+ELTE AQA YY++E P+FSLQSVE+I KI
Sbjct: 236 LLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGF 226
           V EA+ P P S ++ GF
Sbjct: 296 VGEARNPAPSSNAVKGF 312

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5N942|SAPK4_ORYSJ Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2

 Score =  347 bits (890), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 178/243 (73%), Positives = 202/243 (83%), Gaps = 13/243 (5%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           QICHRDLKLEN LLDGSPAPRLKICDFGYSKSS+LHSRPKS VGTPAYIAPEVLSRREYD
Sbjct: 118 QICHRDLKLENVLLDGSPAPRLKICDFGYSKSSVLHSRPKSAVGTPAYIAPEVLSRREYD 177

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           GKLADVWSCGVTLYVMLVGAYPFEDQ+DPKN RKTI RIM+VQYKIPDYVHIS +C+ L+
Sbjct: 178 GKLADVWSCGVTLYVMLVGAYPFEDQDDPKNIRKTIQRIMSVQYKIPDYVHISAECKQLI 237

Query: 152 SRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKEN--PTFSLQSVEEITKI 209
           +RIFV NP RRIT+KEIKSHPWFLKNLPRELTETAQA+YYR++N  P+FS Q+ EEI KI
Sbjct: 238 ARIFVNNPLRRITMKEIKSHPWFLKNLPRELTETAQAMYYRRDNSVPSFSDQTSEEIMKI 297

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGD-------EKEEETDADEEDEYEKTVKEAQQSGEV 262
           V+EA+  P  SR+    G+  +   D       E+ EE + +EEDEY+K VKE   SGE+
Sbjct: 298 VQEARTMPKSSRT----GYWSDAGSDEEEKEEEERPEENEEEEEDEYDKRVKEVHASGEL 353

Query: 263 SVS 265
            +S
Sbjct: 354 RMS 356

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7XKA8|SAPK5_ORYSJ Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1

 Score =  347 bits (890), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 173/250 (69%), Positives = 204/250 (81%), Gaps = 14/250 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 AMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFED +DPKNFRKTISRIM+VQYKIP+YVH+SQ CR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDPKDPKNFRKTISRIMSVQYKIPEYVHVSQPCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENP------------- 196
           LLSRIFVANP +RI++ EIKSHPWFLKNLPREL E AQA+YY +                
Sbjct: 236 LLSRIFVANPYKRISMGEIKSHPWFLKNLPRELKEEAQAVYYNRRGADHAASSASSAAAA 295

Query: 197 -TFSLQSVEEITKIVEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKTVKE 255
             FS QSVE+I +IV+EA+  P   + + G+GWG ++D D+++   + DEED+Y++TV+E
Sbjct: 296 AAFSPQSVEDIMRIVQEAQTVPKPDKPVSGYGWGTDDDDDDQQPAEEEDEEDDYDRTVRE 355

Query: 256 AQQSGEVSVS 265
              S ++ +S
Sbjct: 356 VHASVDLDMS 365

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43292|SRK2G_ARATH Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2

 Score =  340 bits (871), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 176/235 (74%), Positives = 199/235 (84%), Gaps = 4/235 (1%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAP LKICDFGYSKSS+LHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSILHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK ADVWSCGVTLYVMLVGAYPFED  DPKNFRKTI RIMAVQYKIPDYVHISQ+C++
Sbjct: 176 YDGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRKTIQRIMAVQYKIPDYVHISQECKH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFV N ++RIT+KEIK+HPW+LKNLP+EL E+AQA YY+++  +FSLQSVE+I KI
Sbjct: 236 LLSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDT-SFSLQSVEDIMKI 294

Query: 210 VEEAKVPPPVSRSIGGFGWG---GEEDGDEKEEETDADEEDEYEKTVKEAQQSGE 261
           V EA+ P P + ++   G G    EE+  E E E + D+EDEYEK VKEAQ   E
Sbjct: 295 VGEARNPAPSTSAVKSSGSGADEEEEEDVEAEVEEEEDDEDEYEKHVKEAQSCQE 349

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64812|SRK2J_ARATH Serine/threonine-protein kinase SRK2J OS=Arabidopsis thaliana GN=SRK2J PE=1 SV=1

 Score =  323 bits (827), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 158/221 (71%), Positives = 178/221 (80%), Gaps = 4/221 (1%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS PKSTVGTPAYIAPEV  R EYD
Sbjct: 118 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSNPKSTVGTPAYIAPEVFCRSEYD 177

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           GK  DVWSCGV LYVMLVGAYPFED +DP+NFRKT+ +IMAV YKIP YVHIS+DCR LL
Sbjct: 178 GKSVDVWSCGVALYVMLVGAYPFEDPKDPRNFRKTVQKIMAVNYKIPGYVHISEDCRKLL 237

Query: 152 SRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENP--TFSLQSVEEITKI 209
           SRIFVANP  R T+KEIKSH WFLKNLPREL E AQAIYY++      FS Q VEEI KI
Sbjct: 238 SRIFVANPLHRSTLKEIKSHAWFLKNLPRELKEPAQAIYYQRNVNLINFSPQRVEEIMKI 297

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYE 250
           V EA+  P +SR +     G ++  D++EE  DA++E+ Y+
Sbjct: 298 VGEARTIPNLSRPVESL--GSDKKDDDEEEYLDANDEEWYD 336

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0C5D6|SAPK3_ORYSJ Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1

 Score =  303 bits (775), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/220 (67%), Positives = 176/220 (80%), Gaps = 2/220 (0%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S +ICHRDLKLENTLLDGSP PR+KICDFGYSKS+LLHS+PKSTVGTPAYIAPEVLSR+E
Sbjct: 117 SLEICHRDLKLENTLLDGSPTPRVKICDFGYSKSALLHSKPKSTVGTPAYIAPEVLSRKE 176

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVG+YPFED  DP+NFRKTISRI+ VQY IPDYV +S DCR 
Sbjct: 177 YDGKVADVWSCGVTLYVMLVGSYPFEDPGDPRNFRKTISRILGVQYSIPDYVRVSSDCRR 236

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLS+IFVA+PS+RITI EIK H WFLKNLP+E++E  +A  Y+  +     Q+VEEI +I
Sbjct: 237 LLSQIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKAD-YKDTDAAPPTQAVEEIMRI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEY 249
           ++EAKVP  ++ +         E   + EEE  ADE D Y
Sbjct: 296 IQEAKVPGDMAAADPALLAELAELKSDDEEEA-ADEYDTY 334

May play a role in signal transduction of hyperosmotic response.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
356543422	359	PREDICTED: serine/threonine-protein kina	0.886	0.654	0.869	1e-116
357445405	351	Serine/threonine protein kinase [Medicag	0.890	0.672	0.872	1e-115
388490962	351	unknown [Medicago truncatula]	0.890	0.672	0.868	1e-115
357445407	275	Serine/threonine protein kinase [Medicag	0.890	0.858	0.872	1e-114
224118462	353	predicted protein [Populus trichocarpa]	0.890	0.668	0.894	1e-114
225448215	356	PREDICTED: serine/threonine-protein kina	0.890	0.662	0.871	1e-113
147864363	357	hypothetical protein VITISV_028464 [Viti	0.890	0.661	0.851	1e-112
297739581	335	unnamed protein product [Vitis vinifera]	0.758	0.6	0.930	1e-111
356525969	352	PREDICTED: serine/threonine-protein kina	0.890	0.670	0.881	1e-111
441433481	352	sucrose non-fermenting-1-related protein	0.886	0.667	0.848	1e-111

>gi|356543422|ref|XP_003540159.1| PREDICTED: serine/threonine-protein kinase SRK2B-like [Glycine max]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/245 (86%), Positives = 221/245 (90%), Gaps = 10/245 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQ+DPKNFRKTI+RIMAVQYKIPDYVHISQDCR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQDCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVANP+RRITIKEIKSHPWFLKNLPRELTE AQA YYRKENPTFSLQS+E I  I
Sbjct: 236 LLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEGIMNI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEE---------TDADEEDEYEKTVKEAQQSG 260
           VEEAK PPP SRSIGGFGWGGEE+ DE +EE         T+A EEDEYEK VKEAQ SG
Sbjct: 296 VEEAKTPPPASRSIGGFGWGGEEEEDETKEEEDETKEEAVTEA-EEDEYEKRVKEAQASG 354

Query: 261 EVSVS 265
           E  VS
Sbjct: 355 EFHVS 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445405|ref|XP_003592980.1| Serine/threonine protein kinase [Medicago truncatula] gi|55140609|gb|AAV41842.1| stress kinase [Medicago truncatula] gi|55140611|gb|AAV41843.1| stress kinase [Medicago truncatula] gi|355482028|gb|AES63231.1| Serine/threonine protein kinase [Medicago truncatula]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/236 (87%), Positives = 220/236 (93%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQ+DPKNFRKTI+RIMAVQYKIPDYVHISQ+CR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQECRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVA+P+RRITIKEIKSHPWFLKNLPRELTE AQA+YYRKENPT+SLQS+E+I KI
Sbjct: 236 LLSRIFVASPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTYSLQSIEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSVS 265
           VEEAK PP  SRS+GGFGWGGEED DE  E     EEDEYEK VKEAQ+SGE+ V+
Sbjct: 296 VEEAKNPPQASRSVGGFGWGGEEDDDEINEAEAELEEDEYEKRVKEAQESGEIHVN 351

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490962|gb|AFK33547.1| unknown [Medicago truncatula]

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/236 (86%), Positives = 219/236 (92%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQ+DPKNFRKTI+RIMAVQYKIPDYVHISQ+CR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQECRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVA+P+RRITIKEIKSHPWFLKNLPRELTE AQA+YYRKENPT+SLQS+E+I KI
Sbjct: 236 LLSRIFVASPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTYSLQSIEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSVS 265
           VEEAK PP  SRS+GGFGWGGEED DE  E     EEDEYEK VKEAQ+SGE+  +
Sbjct: 296 VEEAKNPPQASRSVGGFGWGGEEDDDEINEAEAELEEDEYEKRVKEAQESGEIHAN 351

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445407|ref|XP_003592981.1| Serine/threonine protein kinase [Medicago truncatula] gi|355482029|gb|AES63232.1| Serine/threonine protein kinase [Medicago truncatula]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/236 (87%), Positives = 220/236 (93%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 40  SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 99

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQ+DPKNFRKTI+RIMAVQYKIPDYVHISQ+CR+
Sbjct: 100 YDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQECRH 159

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVA+P+RRITIKEIKSHPWFLKNLPRELTE AQA+YYRKENPT+SLQS+E+I KI
Sbjct: 160 LLSRIFVASPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTYSLQSIEDIMKI 219

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSVS 265
           VEEAK PP  SRS+GGFGWGGEED DE  E     EEDEYEK VKEAQ+SGE+ V+
Sbjct: 220 VEEAKNPPQASRSVGGFGWGGEEDDDEINEAEAELEEDEYEKRVKEAQESGEIHVN 275

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118462|ref|XP_002331488.1| predicted protein [Populus trichocarpa] gi|222873566|gb|EEF10697.1| predicted protein [Populus trichocarpa]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 222/238 (93%), Gaps = 2/238 (0%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI+RIMAVQYKIPDYVHISQDCR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVANP RRITIKEIKSHPWFLKNLPRELTE AQA+YYRKENPTFSLQSVEEI KI
Sbjct: 236 LLSRIFVANPIRRITIKEIKSHPWFLKNLPRELTEAAQAMYYRKENPTFSLQSVEEIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGG--EEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSVS 265
           VEEAK+PPPVSRSIGGFGW G  ++D  E + E + +EEDEYEK VKEAQ SGEV VS
Sbjct: 296 VEEAKIPPPVSRSIGGFGWVGEEDDDVKEDDAEEEEEEEDEYEKRVKEAQASGEVHVS 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448215|ref|XP_002269221.1| PREDICTED: serine/threonine-protein kinase SRK2B isoform 1 [Vitis vinifera]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/241 (87%), Positives = 224/241 (92%), Gaps = 5/241 (2%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LL+RIFVANPSRR+TIK+IK+HPWFLKNLPRELTE AQA+YYR+ENPTFSLQS+E+I KI
Sbjct: 236 LLARIFVANPSRRVTIKDIKNHPWFLKNLPRELTEAAQALYYRRENPTFSLQSIEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGG-----EEDGDEKEEETDADEEDEYEKTVKEAQQSGEVSV 264
           V+EAK PPPVSRSIGGFGWGG     EE+  E+E ET+ +EEDEYEK VKEA  SGEV V
Sbjct: 296 VDEAKTPPPVSRSIGGFGWGGEEEEEEEEEKEEEVETEEEEEDEYEKQVKEAHASGEVHV 355

Query: 265 S 265
           S
Sbjct: 356 S 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864363|emb|CAN78793.1| hypothetical protein VITISV_028464 [Vitis vinifera]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/242 (85%), Positives = 221/242 (91%), Gaps = 6/242 (2%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LL+RIFVANPSRR+TIK+IK+HPWFLKNLPRELTE AQA+YYR+ENPTFSLQS+E+I KI
Sbjct: 236 LLARIFVANPSRRVTIKDIKNHPWFLKNLPRELTEAAQALYYRRENPTFSLQSIEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEEDEYEKT------VKEAQQSGEVS 263
           V+EAK PPPVSRSIGGFGWGGEE  +E+EEE + + E E E+       VKEA  SGEV 
Sbjct: 296 VDEAKTPPPVSRSIGGFGWGGEEKKEEEEEEKEEEVETEEEEEDEYEKQVKEAHASGEVH 355

Query: 264 VS 265
           VS
Sbjct: 356 VS 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739581|emb|CBI29763.3| unnamed protein product [Vitis vinifera]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/201 (93%), Positives = 197/201 (98%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LL+RIFVANPSRR+TIK+IK+HPWFLKNLPRELTE AQA+YYR+ENPTFSLQS+E+I KI
Sbjct: 236 LLARIFVANPSRRVTIKDIKNHPWFLKNLPRELTEAAQALYYRRENPTFSLQSIEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGG 230
           V+EAK PPPVSRSIGGFGWGG
Sbjct: 296 VDEAKTPPPVSRSIGGFGWGG 316

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525969|ref|XP_003531593.1| PREDICTED: serine/threonine-protein kinase SRK2B-like [Glycine max]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/237 (88%), Positives = 221/237 (93%), Gaps = 1/237 (0%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI+RIMAVQYKIPDYVHISQDCR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVANP+RRITIKEIKSHPWF+KNLPRELTE AQA YYRKENPTFSLQS+E+I  I
Sbjct: 236 LLSRIFVANPARRITIKEIKSHPWFVKNLPRELTEVAQAAYYRKENPTFSLQSIEDIMNI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDAD-EEDEYEKTVKEAQQSGEVSVS 265
           VEEAK PPP SRSIGGFGWGGEE+ +++ +E  A+ EEDEYEK VKEAQ SGE  VS
Sbjct: 296 VEEAKAPPPASRSIGGFGWGGEEEEEDETKEAVAETEEDEYEKRVKEAQASGEFHVS 352

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|441433481|gb|AGC31662.1| sucrose non-fermenting-1-related protein kinase [Malus x domestica]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/238 (84%), Positives = 216/238 (90%), Gaps = 3/238 (1%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGS APRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct: 116 SLQICHRDLKLENTLLDGSAAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKT+ +IM V YKIPD+VH+SQ+CR+
Sbjct: 176 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTMKKIMGVHYKIPDHVHMSQECRH 235

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           LLSRIFVANP+RRITIK+IK+HPWFLKNLPRELTE AQ IYYRKENPTFS Q+VE+I KI
Sbjct: 236 LLSRIFVANPARRITIKDIKNHPWFLKNLPRELTEAAQIIYYRKENPTFSPQTVEDIMKI 295

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEK--EEETDADEEDEYEKTVKEAQQSGEVSVS 265
           VEEAK+PPPVSRSIGGF W GEEDGD K   E  + +EEDEY KTVKE   SGEVSVS
Sbjct: 296 VEEAKIPPPVSRSIGGFSW-GEEDGDTKEEVEGEEEEEEDEYVKTVKEVHASGEVSVS 352

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2206046	361	SNRK2.10 "SNF1-related protein	0.732	0.537	0.876	8.3e-90
TAIR|locus:2160559	360	SNRK2.5 "SNF1-related protein	0.732	0.538	0.824	1.4e-85
TAIR|locus:2159597	353	SNRK2.1 "SNF1-related protein	0.728	0.546	0.804	8.2e-83
TAIR|locus:2045319	339	SNRK2.9 "SNF1-related protein	0.724	0.566	0.778	2.1e-77
TAIR|locus:2118929	362	OST1 "OPEN STOMATA 1" [Arabido	0.720	0.527	0.698	5.3e-72
TAIR|locus:2032075	343	SNRK2-8 "SNF1-RELATED PROTEIN	0.709	0.548	0.706	7e-70
TAIR|locus:2174999	361	SNRK2.3 "sucrose nonfermenting	0.728	0.534	0.670	9.2e-68
TAIR|locus:2140104	350	SNRK2.7 "SNF1-related protein	0.698	0.528	0.686	1.2e-67
DICTYBASE|DDB_G0277165	833	DDB_G0277165 "BRSK subfamily p	0.513	0.163	0.460	1.4e-30
TAIR|locus:2183720	445	CIPK5 "CBL-interacting protein	0.513	0.305	0.438	2.5e-28

TAIR|locus:2206046 SNRK2.10 "SNF1-related protein kinase 2.10" [Arabidopsis thaliana (taxid:3702)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 170/194 (87%), Positives = 180/194 (92%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             + QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS PKSTVGTPAYIAPEVLSR E
Sbjct:   116 AMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSMPKSTVGTPAYIAPEVLSRGE 175

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             YDGK+ADVWSCGVTLYVMLVGAYPFEDQEDPKNF+KTI RIMAV+YKIPDYVHISQDC++
Sbjct:   176 YDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFKKTIQRIMAVKYKIPDYVHISQDCKH 235

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
             LLSRIFV N ++RITI +IK HPWFLKNLPRELTE AQA Y+RKENPTFSLQSVEEI KI
Sbjct:   236 LLSRIFVTNSNKRITIGDIKKHPWFLKNLPRELTEIAQAAYFRKENPTFSLQSVEEIMKI 295

Query:   210 VEEAKVPPPVSRSI 223
             VEEAK P  VSRSI
Sbjct:   296 VEEAKTPARVSRSI 309

GO:0005886 "plasma membrane" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;RCA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0048527 "lateral root development" evidence=IMP

GO:0070300 "phosphatidic acid binding" evidence=IDA

TAIR|locus:2160559 SNRK2.5 "SNF1-related protein kinase 2.5" [Arabidopsis thaliana (taxid:3702)]

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 160/194 (82%), Positives = 176/194 (90%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             S QICHRDLKLENTLLDGSPAP LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE
Sbjct:   116 SLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 175

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             YDGK ADVWSCGVTLYVMLVG YPFED +DP+NFRKTI RIMAVQYKIPDYVHISQ+CR+
Sbjct:   176 YDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRH 235

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
             LLSRIFV N ++RIT+KEIK HPW+LKNLP+ELTE AQA YY++E P+FSLQSVE+I KI
Sbjct:   236 LLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKI 295

Query:   210 VEEAKVPPPVSRSI 223
             V EA+ P P S ++
Sbjct:   296 VGEARNPAPSSNAV 309

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

TAIR|locus:2159597 SNRK2.1 "SNF1-related protein kinase 2.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
 Identities = 156/194 (80%), Positives = 176/194 (90%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             S QICHRDLKLENTLLDGSPAP LKICDFGYSKSS+LHSRPKSTVGTPAYIAPEVLSRRE
Sbjct:   116 SLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSILHSRPKSTVGTPAYIAPEVLSRRE 175

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             YDGK ADVWSCGVTLYVMLVGAYPFED  DPKNFRKTI RIMAVQYKIPDYVHISQ+C++
Sbjct:   176 YDGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRKTIQRIMAVQYKIPDYVHISQECKH 235

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
             LLSRIFV N ++RIT+KEIK+HPW+LKNLP+EL E+AQA YY+++  +FSLQSVE+I KI
Sbjct:   236 LLSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDT-SFSLQSVEDIMKI 294

Query:   210 VEEAKVPPPVSRSI 223
             V EA+ P P + ++
Sbjct:   295 VGEARNPAPSTSAV 308

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;TAS

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

TAIR|locus:2045319 SNRK2.9 "SNF1-related protein kinase 2.9" [Arabidopsis thaliana (taxid:3702)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 151/194 (77%), Positives = 163/194 (84%)

Query:    32 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
             QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS PKSTVGTPAYIAPEV  R EYD
Sbjct:   118 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSNPKSTVGTPAYIAPEVFCRSEYD 177

Query:    92 GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
             GK  DVWSCGV LYVMLVGAYPFED +DP+NFRKT+ +IMAV YKIP YVHIS+DCR LL
Sbjct:   178 GKSVDVWSCGVALYVMLVGAYPFEDPKDPRNFRKTVQKIMAVNYKIPGYVHISEDCRKLL 237

Query:   152 SRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKE-NP-TFSLQSVEEITKI 209
             SRIFVANP  R T+KEIKSH WFLKNLPREL E AQAIYY++  N   FS Q VEEI KI
Sbjct:   238 SRIFVANPLHRSTLKEIKSHAWFLKNLPRELKEPAQAIYYQRNVNLINFSPQRVEEIMKI 297

Query:   210 VEEAKVPPPVSRSI 223
             V EA+  P +SR +
Sbjct:   298 VGEARTIPNLSRPV 311

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2118929 OST1 "OPEN STOMATA 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 137/196 (69%), Positives = 165/196 (84%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             + Q+CHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL ++E
Sbjct:   133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             YDGK+ADVWSCGVTLYVMLVGAYPFED E+PKNFRKTI RI+ VQY IPDYVHIS +CR+
Sbjct:   193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE--TAQAIYYRKENPTFSLQSVEEIT 207
             L+SRIFVA+P++RI+I EI++H WFLKNLP +L    T    +   + P    QS+EEI 
Sbjct:   253 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG---QSIEEIM 309

Query:   208 KIVEEAKVPPPVSRSI 223
             +I+ EA VPP  ++++
Sbjct:   310 QIIAEATVPPAGTQNL 325

GO:0004672 "protein kinase activity" evidence=IEA;IDA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009414 "response to water deprivation" evidence=IGI;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IDA;IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0009931 "calcium-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010118 "stomatal movement" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0005829 "cytosol" evidence=RCA;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005985 "sucrose metabolic process" evidence=IMP

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IMP

GO:0019432 "triglyceride biosynthetic process" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0048366 "leaf development" evidence=IMP

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

TAIR|locus:2032075 SNRK2-8 "SNF1-RELATED PROTEIN KINASE 2-8" [Arabidopsis thaliana (taxid:3702)]

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 137/194 (70%), Positives = 159/194 (81%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             S QICHRDLKLENTLLDGS APR+KICDFGYSKS +LHS+PK+TVGTPAYIAPEVLS +E
Sbjct:   116 SLQICHRDLKLENTLLDGSEAPRVKICDFGYSKSGVLHSQPKTTVGTPAYIAPEVLSTKE 175

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             YDGK+ADVWSCGVTLYVMLVGAYPFED  DPK+FRKTI RI+  QY IPDYV +S +CR+
Sbjct:   176 YDGKIADVWSCGVTLYVMLVGAYPFEDPSDPKDFRKTIGRILKAQYAIPDYVRVSDECRH 235

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
             LLSRIFVANP +RITI+EIK+H WFLKNLP E+ E +  +      P  S Q+VEEI  I
Sbjct:   236 LLSRIFVANPEKRITIEEIKNHSWFLKNLPVEMYEGSLMM----NGP--STQTVEEIVWI 289

Query:   210 VEEAKVPPPVSRSI 223
             +EEA+ P  V+  +
Sbjct:   290 IEEARKPITVATGL 303

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=IGI

TAIR|locus:2174999 SNRK2.3 "sucrose nonfermenting 1(SNF1)-related protein kinase 2.3" [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 130/194 (67%), Positives = 160/194 (82%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL R+E
Sbjct:   134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             YDGK+ADVWSCGVTLYVMLVGAYPFED E+P+++RKTI RI++V+Y IPD + IS +C +
Sbjct:   194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
             L+SRIFVA+P+ RI+I EIK+H WFLKNLP +L   +      +E P   +QS++ I +I
Sbjct:   254 LISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQE-PEQPMQSLDTIMQI 312

Query:   210 VEEAKVPPPVSRSI 223
             + EA +P   +R +
Sbjct:   313 ISEATIPAVRNRCL 326

GO:0004672 "protein kinase activity" evidence=IEA;IDA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IGI

GO:0005829 "cytosol" evidence=RCA;IDA

GO:0009739 "response to gibberellin stimulus" evidence=IGI

GO:0010029 "regulation of seed germination" evidence=IGI;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IGI

TAIR|locus:2140104 SNRK2.7 "SNF1-related protein kinase 2.7" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 129/188 (68%), Positives = 153/188 (81%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             + QICHRDLKLENTLLDGSP+  LKICDFGYSKSS+LHS+PKSTVGTPAY+APEVLSR+E
Sbjct:   116 AMQICHRDLKLENTLLDGSPSSHLKICDFGYSKSSVLHSQPKSTVGTPAYVAPEVLSRKE 175

Query:    90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             Y+GK+ADVWSCGVTLYVMLVGAYPFED EDP+N R TI RI++V Y IPDYV IS +C++
Sbjct:   176 YNGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNIRNTIQRILSVHYTIPDYVRISSECKH 235

Query:   150 LLSRIFVANPSRRITIKEIKSHPWFLKN---LPRELTETAQAIYYRKENPTFSLQSVEEI 206
             LLSRIFVA+P +RIT+ EI+ HPWFLK    +P E  +    +   +E      QSVEEI
Sbjct:   236 LLSRIFVADPDKRITVPEIEKHPWFLKGPLVVPPEEEKCDNGVEEEEEEEEKCRQSVEEI 295

Query:   207 TKIVEEAK 214
              KI+EEA+
Sbjct:   296 VKIIEEAR 303

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI;IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

DICTYBASE|DDB_G0277165 DDB_G0277165 "BRSK subfamily protein kinase DDB_G0277165" [Dictyostelium discoideum (taxid:44689)]

 Score = 347 (127.2 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 70/152 (46%), Positives = 100/152 (65%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPEVL 85
             S+ ICHRDLK EN LL G    R+KI DFG      K  LLH+    + G+P Y +PEV+
Sbjct:   126 SRNICHRDLKPENLLLSGDK--RIKIADFGMGSIVRKDMLLHT----SCGSPHYASPEVV 179

Query:    86 SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
             S  +YDG+ ADVWSCGV LY +L G  PF+D+    N R+ ++++    + +P Y+H  +
Sbjct:   180 SGIDYDGQKADVWSCGVILYALLTGKLPFDDE----NIRRLLNKVKNGAFSMPPYIH--K 233

Query:   146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
             D ++LL+++   +PS+RI+IKEIK HPWF+ N
Sbjct:   234 DAQDLLTKMLTVDPSKRISIKEIKEHPWFVSN 265

GO:0030587 "sorocarp development" evidence=IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TAIR|locus:2183720 CIPK5 "CBL-interacting protein kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 68/155 (43%), Positives = 91/155 (58%)

Query:    30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSLLHSRPKSTVGTPAYIAP 82
             S+ + HRDLK EN LLD +    LKI DFG S       +  LLH++     GTPAY+AP
Sbjct:   128 SRGVSHRDLKPENLLLDENGD--LKISDFGLSALPEQILQDGLLHTQ----CGTPAYVAP 181

Query:    83 EVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH 142
             EVL ++ YDG  AD+WSCGV LYV+L G  PF+D+     +RK    I    ++ P +  
Sbjct:   182 EVLKKKGYDGAKADIWSCGVVLYVLLAGCLPFQDENLMNMYRK----IFRADFEFPPW-- 235

Query:   143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
              S + R L+S++ V +P RRI+I  I   PW  KN
Sbjct:   236 FSPEARRLISKLLVVDPDRRISIPAIMRTPWLRKN 270

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C958	SRK2B_ARATH	2, ., 7, ., 1, 1, ., 1	0.7967	0.8905	0.6537	yes	no
Q7XQP4	SAPK7_ORYSJ	2, ., 7, ., 1, 1, ., 1	0.7438	0.8830	0.6518	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.946
3rd Layer	2.7.11	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-50
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-41
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-35
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-32
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-30
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-30
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-30
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-30
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-28
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	9e-28
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-26
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-25
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-25
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-24
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-24
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-23
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-23
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-23
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	8e-23
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-22
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-22
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-22
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-22
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-22
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	5e-22
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-22
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-22
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-21
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-21
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-21
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-20
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-20
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-20
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-19
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-19
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-19
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-19
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-19
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-19
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-19
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-19
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-19
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-18
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-18
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-18
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-17
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-17
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-17
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-17
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-17
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-17
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-17
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-17
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-17
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-17
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	6e-17
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	7e-17
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-16
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-16
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-16
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-16
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-16
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-16
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	7e-16
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	7e-16
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	9e-16
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-15
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-15
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-15
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-15
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-15
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-14
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-14
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-14
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-14
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-14
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-14
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-14
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-14
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-14
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-14
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	5e-14
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-13
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-13
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-13
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-13
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-13
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-13
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-13
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-13
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-13
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-13
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-13
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-13
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-13
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	9e-13
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	9e-13
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-12
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-12
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-12
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-12
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-12
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-12
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-12
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-12
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-12
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-12
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-12
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	5e-12
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-11
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-11
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-11
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-11
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	4e-11
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-11
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	5e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	5e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-11
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	7e-11
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-11
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-10
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-10
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	4e-10
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-10
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-10
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	7e-10
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	7e-10
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	8e-10
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	9e-10
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-09
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-09
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-09
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-09
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	8e-09
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	9e-09
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-08
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-08
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-08
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-08
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-08
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-08
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	9e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-07
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-07
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-07
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-07
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	7e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-06
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-06
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	8e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	9e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	1e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	1e-05
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-05
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-05
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	4e-05
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	4e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	7e-05
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	5e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	0.001
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.001
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.001
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.002
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	0.002
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	0.004
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  164 bits (417), Expect = 7e-50
 Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 7/146 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+ I HRDLK EN LLD      +K+ DFG ++      +  + VGTP Y+APEVL  + 
Sbjct: 115 SKGIVHRDLKPENILLDEDG--HVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKG 172

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-DYVHISQDCR 148
           Y     D+WS GV LY +L G  PF   +      +   +I   +   P     IS + +
Sbjct: 173 YGKA-VDIWSLGVILYELLTGKPPFPGDDQLL---ELFKKIGKPKPPFPPPEWDISPEAK 228

Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
           +L+ ++ V +P +R+T +E   HP+F
Sbjct: 229 DLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  142 bits (361), Expect = 1e-41
 Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 6/148 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  I HRDLK EN LLD +    +KI DFG +K  L  S   +T VGTP Y+APEVL   
Sbjct: 116 SNGIIHRDLKPENILLDENG--VVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGG 173

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH--ISQD 146
              G   DVWS GV LY +L G  PF   E+  +  + I RI+    +  +      S++
Sbjct: 174 NGYGPKVDVWSLGVILYELLTGKPPFSG-ENILDQLQLIRRILGPPLEFDEPKWSSGSEE 232

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++L+ +    +PS+R T +EI  HPWF
Sbjct: 233 AKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  127 bits (321), Expect = 1e-35
 Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 17/151 (11%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLH-SRPKSTVGTPAYIAPEVLS 86
           S  I +RDLK EN LLD  G     +K+ DFG +K      SR  +  GTP Y+APEVL 
Sbjct: 111 SLGIIYRDLKPENILLDADG----HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLL 166

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            + Y GK  D WS GV LY ML G  PF   ED K   +   +I+    + P+++  S +
Sbjct: 167 GKGY-GKAVDWWSLGVLLYEMLTGKPPFYA-EDRK---EIYEKILKDPLRFPEFL--SPE 219

Query: 147 CRNLLSRIFVANPSRRIT---IKEIKSHPWF 174
            R+L+S +   +P++R+     +EIK+HP+F
Sbjct: 220 ARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  119 bits (300), Expect = 4e-32
 Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 20/152 (13%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S  I +RDLK EN LLD  G     +KI DFG++K   +  R  +  GTP Y+APE++  
Sbjct: 119 SLDIVYRDLKPENLLLDSDGY----IKITDFGFAK--RVKGRTYTLCGTPEYLAPEIILS 172

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           + Y GK  D W+ G+ +Y ML G  PF D    + + K    I+  + + P     S D 
Sbjct: 173 KGY-GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK----ILEGKVRFP--SFFSPDA 225

Query: 148 RNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           ++L+  +   + ++R+      + +IK+HPWF
Sbjct: 226 KDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  114 bits (289), Expect = 1e-30
 Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 34/170 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---------------------SSLLHS 68
           S+ I HRDLK EN LLD      +KI DFG +K                           
Sbjct: 120 SKGIIHRDLKPENILLDKDM--HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177

Query: 69  RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS 128
           R  S VGT  Y++PE+L+ +   GK +D+W+ G  +Y ML G  PF    +   F+K   
Sbjct: 178 RFASFVGTAEYVSPELLNEKPA-GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQK--- 233

Query: 129 RIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIK----EIKSHPWF 174
            I+ ++Y  P   +   D ++L+ ++ V +P  R+ +     E+K+HP+F
Sbjct: 234 -ILKLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  113 bits (286), Expect = 2e-30
 Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 19/154 (12%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL------LHSRPKST---VGTPAYIAPE 83
           I HRDLK +N L+D +    LK+ DFG SK  L      L+   K     VGTP YIAPE
Sbjct: 114 IIHRDLKPDNILIDSNG--HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPE 171

Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           V+  + +  K  D WS G  LY  LVG  PF      +   +    I+  + + P+ V +
Sbjct: 172 VILGQGH-SKTVDWWSLGCILYEFLVGIPPFHG----ETPEEIFQNILNGKIEWPEDVEV 226

Query: 144 SQDCRNLLSRIFVANPSRRI---TIKEIKSHPWF 174
           S +  +L+S++ V +P +R+   +I+EIK+HP+F
Sbjct: 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  113 bits (285), Expect = 3e-30
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 27/157 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
           S  I HRD+K  N L+D      +K+ DFG +K            S  GTP ++APEV+ 
Sbjct: 119 SNGIVHRDIKGANILVDSDG--VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI- 175

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--------- 137
           R E  G+ AD+WS G T+  M  G  P+ +  +P          MA  YKI         
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP----------MAALYKIGSSGEPPEI 225

Query: 138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           P+  H+S++ ++ L +    +P +R T  E+  HP+ 
Sbjct: 226 PE--HLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  111 bits (281), Expect = 4e-30
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 39/144 (27%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRDLK EN LLD S   ++K+ DFG SK  +   S  K+ VGTPAY+APEVL  +
Sbjct: 110 SNGIIHRDLKPENILLD-SDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK 168

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  + +D+WS GV LY +                                      + +
Sbjct: 169 GYYSEKSDIWSLGVILYEL-------------------------------------PELK 191

Query: 149 NLLSRIFVANPSRRITIKEIKSHP 172
           +L+ ++   +P +R + KEI  H 
Sbjct: 192 DLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  108 bits (271), Expect = 3e-28
 Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 16/153 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           ++ I +RDLK EN LLD +    +K+ DFG++K      +  +  GTP Y+APE++  + 
Sbjct: 111 NRGIIYRDLKPENLLLDSNG--YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKG 168

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFRKTISRIMAVQYKI--PDYVHISQD 146
           YD    D WS G+ LY +L G  PF ED EDP    +  + I+    K+  P+Y  I + 
Sbjct: 169 YD-FSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGNGKLEFPNY--IDKA 222

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            ++L+ ++   NP  R+      IK+IK H WF
Sbjct: 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWF 255

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  108 bits (273), Expect = 9e-28
 Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 41/173 (23%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSK----------------------SSLLHSRPK- 71
           HRD+K +N L+D      +K+ DFG  K                      + L+  R   
Sbjct: 124 HRDIKPDNILIDADG--HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK 181

Query: 72  -------STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFR 124
                  STVGTP YIAPEVL    Y G   D WS GV LY ML G  PF         +
Sbjct: 182 QRRVRANSTVGTPDYIAPEVLRGTPY-GLECDWWSLGVILYEMLYGFPPFYSD----TLQ 236

Query: 125 KTISRIMAVQ--YKIPDYVHISQDCRNLLSRIFVANPSRRIT-IKEIKSHPWF 174
           +T ++I+  +   + P    +S +  +L+ R  + +P  R+   +EIKSHP+F
Sbjct: 237 ETYNKIINWKESLRFPPDPPVSPEAIDLICR-LLCDPEDRLGSFEEIKSHPFF 288

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  103 bits (259), Expect = 2e-26
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 13/142 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP--KSTVGTPAYIAPEVLSR 87
           S++I HRD+K +N  L       +K+ DFG SK  L  +    K+ VGTP Y++PE+   
Sbjct: 121 SRKILHRDIKPQNIFLT--SNGLVKLGDFGISKV-LSSTVDLAKTVVGTPYYLSPELCQN 177

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYVHISQD 146
           + Y+ K +D+WS G  LY +    +PFE +    N  +   +I+  QY  IP     S +
Sbjct: 178 KPYNYK-SDIWSLGCVLYELCTLKHPFEGE----NLLELALKILKGQYPPIPS--QYSSE 230

Query: 147 CRNLLSRIFVANPSRRITIKEI 168
            RNL+S +   +P  R +I +I
Sbjct: 231 LRNLVSSLLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  100 bits (252), Expect = 2e-25
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 27/159 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTPAYIAPEV 84
           S  I HRD+K  N  LD +    +K+ DFG +      ++ +    +S  GTPAY+APEV
Sbjct: 117 SHGIVHRDIKPANIFLDHNGV--IKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV 174

Query: 85  LSRREYDGKL--ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK------ 136
           ++  +  G    AD+WS G  +  M  G  P+ + ++   F         + +       
Sbjct: 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EF--------QIMFHVGAGHK 224

Query: 137 --IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
             IPD + +S + ++ L R   ++P +R T  E+  HP+
Sbjct: 225 PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =   99 bits (250), Expect = 3e-25
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S  I HRD+K  N LL  DG     +K+ DFG S          + VGTP ++APEV++ 
Sbjct: 116 SNGIIHRDIKAANILLTSDGE----VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVING 171

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-QYKIPDYVHISQD 146
           + YD K AD+WS G+T   +  G  P+ +        K + +I       + +    S +
Sbjct: 172 KPYDYK-ADIWSLGITAIELAEGKPPYSEL----PPMKALFKIATNGPPGLRNPEKWSDE 226

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPW 173
            ++ L +    NP +R T +++  HP+
Sbjct: 227 FKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 98.6 bits (246), Expect = 3e-24
 Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 15/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            + I +RDLKL+N LLD      +KI DFG  K  +L     ST  GTP YIAPE+LS +
Sbjct: 114 ERGIIYRDLKLDNVLLDSEG--HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQ 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y G   D W+ GV LY ML G  PFE  ++ + F+     I+  + + P    +S++ +
Sbjct: 172 PY-GPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS----ILEDEVRYP--RWLSKEAK 224

Query: 149 NLLSRIFVANPSRRITI-----KEIKSHPWF 174
           ++L      NP +R+       ++IK HP+F
Sbjct: 225 SILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 96.2 bits (240), Expect = 8e-24
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 16/151 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S+ I HRD+K +N LLD      + I DF  +  + +     +T   GTP Y+APEVL R
Sbjct: 118 SKGIIHRDIKPDNILLDEQG--HVHITDFNIA--TKVTPDTLTTSTSGTPGYMAPEVLCR 173

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKIPDY-VHISQ 145
           + Y     D WS GVT Y  L G  P+       + R    +I A Q      Y    S 
Sbjct: 174 QGY-SVAVDWWSLGVTAYECLRGKRPYR-----GHSRTIRDQIRAKQETADVLYPATWST 227

Query: 146 DCRNLLSRIFVANPSRRI--TIKEIKSHPWF 174
           +  + ++++   +P +R+   +K++K+HP+F
Sbjct: 228 EAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 97.2 bits (242), Expect = 1e-23
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 22/182 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  + +RDLKLEN +LD      +KI DFG  K  +       T  GTP Y+APEVL   
Sbjct: 113 SCDVVYRDLKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 170

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +S + +
Sbjct: 171 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLSPEAK 223

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSV 203
           +LL+ +   +P +R+       KEI  H +F        +   Q +  +K  P F  Q  
Sbjct: 224 SLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF-------ASINWQDVVQKKLEPPFKPQVT 276

Query: 204 EE 205
            E
Sbjct: 277 SE 278

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 95.8 bits (238), Expect = 4e-23
 Identities = 54/148 (36%), Positives = 88/148 (59%), Gaps = 13/148 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKSTVGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N LLD      +KI DFG  K ++L  ++  +  GTP YIAPE+L  +
Sbjct: 114 SKGIVYRDLKLDNILLDTDG--HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQ 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH-ISQDC 147
           +Y     D WS GV LY ML+G  PF   ++ + F+       +++   P Y   ++++ 
Sbjct: 172 KY-NTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQ-------SIRMDNPCYPRWLTREA 223

Query: 148 RNLLSRIFVANPSRRITIK-EIKSHPWF 174
           +++L ++FV  P RR+ +K +I+ HP+F
Sbjct: 224 KDILVKLFVREPERRLGVKGDIRQHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 96.0 bits (237), Expect = 7e-23
 Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSLLHSRPKSTVGTPAYIAP 82
           S+ I HRD+K EN LLD      +K+ DFG +K       +S + + P ++VGTP Y+AP
Sbjct: 119 SKGIIHRDIKPENILLD-RDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177

Query: 83  EVLS--RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI-------MAV 133
           EVL      Y    +D+WS G+TLY +L G  PFE +++     +T+  I       +A 
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237

Query: 134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
                +   IS+   +LL ++   +P  R++     SH        +        +    
Sbjct: 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL--AHLKLKESDLSDLLKPD 295

Query: 194 ENPTFSLQSVEEITKIVEEAKVPPPVSRSI 223
           ++    L     +  ++            +
Sbjct: 296 DSAPLRLSLPPSLEALISSLNSLAISGSDL 325

Length = 384

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 93.7 bits (233), Expect = 8e-23
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 11/145 (7%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRD+K EN L+D      LK+ DFG S++ L     K  VGTP Y+APE +     D 
Sbjct: 118 IIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVG-DD 171

Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           K++D WS G  ++  L G  PF  +     F   +SR   + +        S +  +L++
Sbjct: 172 KMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR--INWPEEVKEFCSPEAVDLIN 229

Query: 153 RIFVANPSRRI---TIKEIKSHPWF 174
           R+   +P++R+     +EIKSHP+F
Sbjct: 230 RLLCMDPAKRLGANGYQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 94.1 bits (234), Expect = 1e-22
 Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 15/148 (10%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRPKSTVGTPAYIAPEVLSRREYD 91
           I +RDLK EN LLD      +K+ DFG SK S+ H  +  S  GT  Y+APEV++RR + 
Sbjct: 119 IIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 176

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
            + AD WS GV ++ ML G+ PF+     K+ ++T++ I+  +  +P +  +S + ++LL
Sbjct: 177 -QSADWWSFGVLMFEMLTGSLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQSLL 229

Query: 152 SRIFVANPSRRI-----TIKEIKSHPWF 174
             +F  NP+ R+      ++EIK HP+F
Sbjct: 230 RALFKRNPANRLGAGPDGVEEIKRHPFF 257

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 94.1 bits (234), Expect = 1e-22
 Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 13/148 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            + I +RDLKL+N LLD      +KI DFG  K ++      ST  GTP YIAPE+L  +
Sbjct: 114 KKGIIYRDLKLDNVLLDKDG--HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQ 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY-VHISQDC 147
           +Y+  + D WS GV LY ML+G  PF  +++ + F        ++    P +   IS++ 
Sbjct: 172 KYNESV-DWWSFGVLLYEMLIGQSPFHGEDEDELFD-------SILNDRPHFPRWISKEA 223

Query: 148 RNLLSRIFVANPSRRITIK-EIKSHPWF 174
           ++ LS++F  +P++R+ +  +I+ HP+F
Sbjct: 224 KDCLSKLFERDPTKRLGVDGDIRQHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 94.4 bits (235), Expect = 2e-22
 Identities = 59/184 (32%), Positives = 82/184 (44%), Gaps = 52/184 (28%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKS-----------SLLHSRPK------------ 71
           HRD+K +N LLD      +K+ DFG                L H+ P             
Sbjct: 124 HRDIKPDNLLLDAKG--HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSS 181

Query: 72  ----------------STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFE 115
                           STVGTP YIAPEV  +  Y  K  D WS GV +Y MLVG  PF 
Sbjct: 182 KRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGY-NKECDWWSLGVIMYEMLVGYPPFC 240

Query: 116 DQEDPKNFRKTISRIMAVQ--YKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKS 170
             ++P   ++T  +I+  +   + PD V +S + ++L+ R       RR+    + EIKS
Sbjct: 241 -SDNP---QETYRKIINWKETLQFPDEVPLSPEAKDLIKR-LCCEAERRLGNNGVNEIKS 295

Query: 171 HPWF 174
           HP+F
Sbjct: 296 HPFF 299

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 93.1 bits (231), Expect = 3e-22
 Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 13/148 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKSTVGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N +LD      +KI DFG  K ++   +R  +  GTP YIAPE+L   
Sbjct: 114 SKGIIYRDLKLDNVMLDRDG--HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGL 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH-ISQDC 147
           +Y   + D WS GV LY ML+G  PF   ++ + F        +++   P Y   I+++ 
Sbjct: 172 KYTFSV-DWWSFGVLLYEMLIGQSPFHGDDEDELFE-------SIRVDTPHYPRWITKES 223

Query: 148 RNLLSRIFVANPSRRITIK-EIKSHPWF 174
           +++L ++F  +P+RR+ +   I+ HP+F
Sbjct: 224 KDILEKLFERDPTRRLGVVGNIRGHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 93.7 bits (233), Expect = 4e-22
 Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 19/151 (12%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           HRD+K +N LLD S    LK+ DFG       + ++     + VGTP YI+PEVL  +  
Sbjct: 165 HRDVKPDNMLLDKSG--HLKLADFGTCMKMDANGMVRC--DTAVGTPDYISPEVLKSQGG 220

Query: 91  D---GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM--AVQYKIPDYVHISQ 145
           D   G+  D WS GV LY MLVG  PF       +   T S+IM        PD + IS+
Sbjct: 221 DGYYGRECDWWSVGVFLYEMLVGDTPFYAD----SLVGTYSKIMDHKNSLTFPDDIEISK 276

Query: 146 DCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             ++L+         R  R  + EIKSHP+F
Sbjct: 277 QAKDLICAFLTDREVRLGRNGVDEIKSHPFF 307

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 92.2 bits (229), Expect = 5e-22
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--RPKSTVGTPAYIAPEVLSRREY 90
           I +RD+KLEN LLD      + + DFG SK  L     R  S  GT  Y+APEV+     
Sbjct: 126 IIYRDIKLENILLDSEG--HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSG 183

Query: 91  D-GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS-RIMAVQYKIPDYVHISQDCR 148
              K  D WS GV  + +L GA PF   +  +N +  IS RI+  +   P    +S + R
Sbjct: 184 GHDKAVDWWSLGVLTFELLTGASPFT-VDGEQNSQSEISRRILKSKPPFPK--TMSAEAR 240

Query: 149 NLLSRIFVANPSRRI---TIKEIKSHPWF 174
           + + ++   +P +R+      EIK+HP+F
Sbjct: 241 DFIQKLLEKDPKKRLGANGADEIKNHPFF 269

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 92.3 bits (229), Expect = 5e-22
 Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 21/208 (10%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           + +RDLK EN LLD      + +CDFG  K ++      +T  GTP Y+APE+L    Y 
Sbjct: 114 VIYRDLKPENILLD--YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYT 171

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
            K  D W+ GV LY ML G  PF D+   + +RK    I+    + PD     +D ++LL
Sbjct: 172 -KAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK----ILQEPLRFPD--GFDRDAKDLL 224

Query: 152 SRIFVANPSRRITI---KEIKSHPWFLK-NLPRELTETAQ-----AIYYRKENPTFSLQS 202
             +   +P+RR+     +EIK+HP+F + +  + L +  Q     A+    +   F  + 
Sbjct: 225 IGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEF 284

Query: 203 VEE--ITKIVEEAKVPPPVSRSIGGFGW 228
             E  I  +V+++ +   V +  GG+ +
Sbjct: 285 TREKPIDSVVDDSHLSETVQQQFGGWSY 312

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 92.3 bits (230), Expect = 7e-22
 Identities = 57/174 (32%), Positives = 78/174 (44%), Gaps = 37/174 (21%)

Query: 33  ICHRDLKLENTLLDGS-----------------PAPRLKICDFGYSKSSLLHS------- 68
           I +RDLK EN LL  S                 P P  K    G  +SS+          
Sbjct: 124 IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSE 183

Query: 69  ----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFR 124
               R  S VGT  YIAPEV+S   +   + D W+ G+ LY ML G  PF+      N  
Sbjct: 184 EPSFRSNSFVGTEEYIAPEVISGDGHGSAV-DWWTLGILLYEMLYGTTPFKG----SNRD 238

Query: 125 KTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIK----EIKSHPWF 174
           +T S I+  +   P    +S   R+L+ ++ V +PS+R+  K    EIK HP+F
Sbjct: 239 ETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 91.3 bits (227), Expect = 2e-21
 Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 26/158 (16%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
             HRDLK EN L+D S    +K+ DFG SK  +  +   S VG+P Y+APEVL  + YD 
Sbjct: 122 YIHRDLKPENFLIDASG--HIKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGYDF 177

Query: 93  KLADVWSCGVTLYVMLVGAYPF------EDQEDPKNFRKTISRIMAVQYKIPDYV----H 142
            + D WS G  LY  L G  PF      E  E+ K +++T+ R        P Y     +
Sbjct: 178 TV-DYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR--------PVYDDPRFN 228

Query: 143 ISQDCRNLLSRIFVANPSRRI-TIKEIKSHPWFLKNLP 179
           +S +  +L++++ + +PSRR  ++++IK+HP+F K + 
Sbjct: 229 LSDEAWDLITKL-INDPSRRFGSLEDIKNHPFF-KEVD 264

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 91.0 bits (226), Expect = 2e-21
 Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 15/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            Q I +RDLK EN LLD      +K+ DFG  K S+       T  GT  Y+APE+L R 
Sbjct: 118 QQGIIYRDLKPENILLDAQG--HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRS 175

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            + GK  D WS G  +Y ML GA PF  +    N +KTI +I+  +  +P Y  ++ + R
Sbjct: 176 GH-GKAVDWWSLGALMYDMLTGAPPFTAE----NRKKTIDKILKGKLNLPPY--LTPEAR 228

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +LL ++   NPS R+        E++SHP+F
Sbjct: 229 DLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF 259

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 88.3 bits (219), Expect = 7e-21
 Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-PKSTVGTPAYIAPEVLSRR 88
            Q+I HRDLK  N LL       +KI D G SK  +L     K+ +GTP Y+APEV   R
Sbjct: 121 EQKILHRDLKSANILL--VANDLVKIGDLGISK--VLKKNMAKTQIGTPHYMAPEVWKGR 176

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE--DQEDPKNFRKTISRIMAVQY-KIPDYVHISQ 145
            Y  K +D+WS G  LY M   A PFE    +D +       ++   +Y  IP     SQ
Sbjct: 177 PYSYK-SDIWSLGCLLYEMATFAPPFEARSMQDLRY------KVQRGKYPPIPP--IYSQ 227

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHP 172
           D +N +  +    P  R    +I + P
Sbjct: 228 DLQNFIRSMLQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 88.3 bits (219), Expect = 2e-20
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 16/149 (10%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           HRD+K EN L+D +    +K+ DFG +   ++      K  VGTP YIAPEVL+    DG
Sbjct: 125 HRDIKPENVLIDRTG--HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDG 182

Query: 93  KLA-----DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--YKIPDYVHISQ 145
           K       D WS GV  Y M+ G  PF   E      KT + IM  Q   K P+   +S 
Sbjct: 183 KGTYGVECDWWSLGVIAYEMIYGRSPFH--EG--TSAKTYNNIMNFQRFLKFPEDPKVSS 238

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           D  +L+  + +     R+  + +  HP+F
Sbjct: 239 DFLDLIQSL-LCGQKERLGYEGLCCHPFF 266

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 87.8 bits (218), Expect = 3e-20
 Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 24/195 (12%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           I +RDLKL+N LLD      +KI DFG  K  +      ST  GTP ++APEVL+   Y 
Sbjct: 122 IVYRDLKLDNLLLD--TEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSY- 178

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
            +  D W  GV +Y MLVG  PF   ++ + F   ++    V+Y       +S++  +++
Sbjct: 179 TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN--DEVRYPR----FLSREAISIM 232

Query: 152 SRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF--SLQSVE 204
            R+   NP RR+       +++K  P+F +++          +  RK  P F  +++  E
Sbjct: 233 RRLLRRNPERRLGSGEKDAEDVKKQPFF-RDI------NWDDLLARKIKPPFVPTIKGPE 285

Query: 205 EITKIVEEAKVPPPV 219
           +++   EE     PV
Sbjct: 286 DVSNFDEEFTSEAPV 300

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 19/166 (11%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLS 86
           SQ + HRD+K +N LL  DGS    +K+ DFG++ + +   S+  S VGTP ++APEV+ 
Sbjct: 134 SQNVIHRDIKSDNILLSKDGS----VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIK 189

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI--- 143
           R++Y  K  D+WS G+    M  G  P+   E P      I+        IP   +    
Sbjct: 190 RKDYGPK-VDIWSLGIMCIEMAEGEPPYLR-EPPLRALFLIT-----TKGIPPLKNPEKW 242

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAI 189
           S + ++ L++  V +P +R + +E+  HP FLK       E A  I
Sbjct: 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHP-FLKK-ACPKEEFAPLI 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 86.0 bits (213), Expect = 6e-20
 Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 25/156 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSR---PKSTVGTPAYIAPEVL 85
           S  I HRD+K  N L D   A  +K+ DFG SK    + S     KS  GTP +++PEV+
Sbjct: 122 SNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI 179

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI----PDYV 141
           S   Y G+ ADVWS G T+  ML    P+ + E            MA  +KI     +  
Sbjct: 180 SGEGY-GRKADVWSVGCTVVEMLTEKPPWAEFEA-----------MAAIFKIATQPTNPQ 227

Query: 142 ---HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              H+S D RN L R FV N  +R + +E+  H + 
Sbjct: 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 86.2 bits (213), Expect = 1e-19
 Identities = 69/216 (31%), Positives = 104/216 (48%), Gaps = 32/216 (14%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--RPKSTVGTPAYIAPEVLSRREY 90
           I +RD+KLEN LLD      + + DFG SK  L     R  S  GT  Y+APE++  +  
Sbjct: 126 IVYRDIKLENILLDSEG--HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGG 183

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS-RIMAVQYKIPDYVHISQDCRN 149
            GK  D WS G+ ++ +L GA PF   E  +N +  +S RI+      P +  I  + ++
Sbjct: 184 HGKAVDWWSLGILIFELLTGASPFT-LEGERNTQSEVSRRILKCDPPFPSF--IGPEAQD 240

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF--SLQS 202
           LL ++   +P +R+        EIK HP+F K L  E      A+  RK NP F  S+++
Sbjct: 241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFF-KGLDWE------ALALRKVNPPFRPSIRN 293

Query: 203 VEEITKIVEE----------AKVPPPVSRSIGGFGW 228
             ++    EE          A  PP  +R   G+ +
Sbjct: 294 ELDVGNFAEEFTNLEPVYSPAGTPPSGARVFQGYSF 329

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 84.8 bits (210), Expect = 2e-19
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 6/143 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +   HRD+K  N L+D +    +K+ DFG +K  +  S  KS  G+P ++APEV++++ 
Sbjct: 120 DRNTVHRDIKGANILVDTNGV--VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
             G  AD+WS G T+  M  G  P+   E      K I R   +   IPD  H+S + ++
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK-IGRSKELP-PIPD--HLSDEAKD 233

Query: 150 LLSRIFVANPSRRITIKEIKSHP 172
            + +    +PS R T  E+  HP
Sbjct: 234 FILKCLQRDPSLRPTAAELLEHP 256

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 29/155 (18%)

Query: 31  QQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSR 87
           Q + HRD+K  N L   DG     +K+ DFG + K + +     S VGTP ++APEV+  
Sbjct: 118 QGVIHRDIKAANILTTKDGV----VKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM 173

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--------PD 139
                  +D+WS G T+  +L G  P+ D              MA  ++I        P+
Sbjct: 174 SGASTA-SDIWSLGCTVIELLTGNPPYYDLNP-----------MAALFRIVQDDHPPLPE 221

Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              IS + ++ L + F  +P+ R T K++  HPW 
Sbjct: 222 --GISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 84.9 bits (210), Expect = 2e-19
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 10/147 (6%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I +RDLK EN LLD     R  I D G +       + K   GTP Y+APEVL    YD 
Sbjct: 116 IVYRDLKPENVLLDDHGNVR--ISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDF 173

Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              D ++ G TLY M+ G  PF  +++     +   R + +  + PD    S + ++L  
Sbjct: 174 S-VDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPD--KFSPEAKDLCE 230

Query: 153 RIFVANPSRRI-----TIKEIKSHPWF 174
            +   +P +R+     +  E++ HP F
Sbjct: 231 ALLQKDPEKRLGCRGGSADEVREHPLF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 84.2 bits (209), Expect = 3e-19
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLS 86
              + HRDLK  N  LD +    +K+ DFG +K  +L       K+ VGTP Y++PE L+
Sbjct: 128 GNTVLHRDLKPANIFLDANNN--VKLGDFGLAK--ILGHDSSFAKTYVGTPYYMSPEQLN 183

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIPDYVHISQ 145
              YD K +D+WS G  +Y +   + PF      +N  +  S+I   ++ +IP     S 
Sbjct: 184 HMSYDEK-SDIWSLGCLIYELCALSPPFT----ARNQLQLASKIKEGKFRRIPY--RYSS 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHP 172
           +   ++  +   +P +R + +E+   P
Sbjct: 237 ELNEVIKSMLNVDPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 84.9 bits (210), Expect = 4e-19
 Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 16/150 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+ I +RDLK EN LLD      +K+ DFG++K   +  R  +  GTP Y+APEV+  + 
Sbjct: 136 SKDIIYRDLKPENLLLDNKG--HVKVTDFGFAKK--VPDRTFTLCGTPEYLAPEVIQSKG 191

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           + GK  D W+ GV LY  + G  PF D + P  FR    +I+A + K P++       R+
Sbjct: 192 H-GKAVDWWTMGVLLYEFIAGYPPFFD-DTP--FR-IYEKILAGRLKFPNWF--DGRARD 244

Query: 150 LLSRIFVANPSRRI-TIK----EIKSHPWF 174
           L+  +   + ++R+ T+K    ++K+HP+F
Sbjct: 245 LVKGLLQTDHTKRLGTLKGGVADVKNHPYF 274

Length = 329

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 84.7 bits (209), Expect = 4e-19
 Identities = 63/182 (34%), Positives = 90/182 (49%), Gaps = 22/182 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S +I +RDLKLEN +LD      +KI DFG  K  +  +   K+  GTP Y+APEVL   
Sbjct: 113 SGKIVYRDLKLENLMLDKDG--HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDN 170

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+    K P    +S D +
Sbjct: 171 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEDIKFPRT--LSADAK 223

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSV 203
           +LLS + + +P++R+       KEI  H +F            Q +Y +K  P F  Q  
Sbjct: 224 SLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG-------VNWQDVYDKKLVPPFKPQVT 276

Query: 204 EE 205
            E
Sbjct: 277 SE 278

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 83.0 bits (206), Expect = 7e-19
 Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 33  ICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRRE 89
           I HRD+K  N L+   G      KI DFG SK         +T VGT  Y++PE + + E
Sbjct: 121 IIHRDIKPSNLLINSKGEV----KIADFGISKVLENTLDQCNTFVGTVTYMSPERI-QGE 175

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
                AD+WS G+TL    +G +PF     P +F + +  I             S + R+
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQP-SFFELMQAICDGPPPSLPAEEFSPEFRD 234

Query: 150 LLSRIFVANPSRRITIKEIKSHPW 173
            +S     +P +R +  E+  HP+
Sbjct: 235 FISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 83.3 bits (206), Expect = 8e-19
 Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 16/150 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S++I +RDLK EN LLD      +K+ DFG++K   L  R  +  GTP Y+APEV+  + 
Sbjct: 119 SKEIVYRDLKPENILLDKEG--HIKLTDFGFAKK--LRDRTWTLCGTPEYLAPEVIQSKG 174

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  K  D W+ G+ +Y MLVG  PF D     N      +I+A + + P   H+    ++
Sbjct: 175 H-NKAVDWWALGILIYEMLVGYPPFFD----DNPFGIYEKILAGKLEFPR--HLDLYAKD 227

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWF 174
           L+ ++ V + +RR+        ++K+H WF
Sbjct: 228 LIKKLLVVDRTRRLGNMKNGADDVKNHRWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 83.3 bits (206), Expect = 1e-18
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 14/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      L   DFG  K  + HS+  ST  GTP Y+APEVL ++
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLT--DFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQ 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            YD +  D W  G  LY ML G  PF  ++  + +   +++ + ++       +IS   R
Sbjct: 172 PYD-RTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP------NISVSAR 224

Query: 149 NLLSRIFVANPSRRI----TIKEIKSHPWFL 175
           +LL  +   + ++R+       EIK+H +F 
Sbjct: 225 HLLEGLLQKDRTKRLGAKDDFLEIKNHVFFS 255

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 82.1 bits (203), Expect = 2e-18
 Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 11/150 (7%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R KS VGTP ++APEV+S
Sbjct: 133 AQGVIHRDIKSDSILLTSDG----RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVIS 188

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 189 RLPY-GTEVDIWSLGIMVIEMVDGEPPYFN-EPPLQAMKRIRDNLPPKLK--NLHKVSPR 244

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L R+ V +P++R T  E+ +HP+  K
Sbjct: 245 LRSFLDRMLVRDPAQRATAAELLNHPFLAK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 7/143 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           ++ I HRDLK +N LLD      +KI DFG SK     S+  + VGTP YI+PE+   + 
Sbjct: 119 TKLILHRDLKTQNILLDKHKMV-VKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKP 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K +D+W+ G  LY +      FE    P    K +S   A     P     S D R 
Sbjct: 178 YNQK-SDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-----PISDRYSPDLRQ 231

Query: 150 LLSRIFVANPSRRITIKEIKSHP 172
           L+  +   +PS+R  + +I + P
Sbjct: 232 LILSMLNLDPSKRPQLSQIMAQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 81.4 bits (201), Expect = 1e-17
 Identities = 60/193 (31%), Positives = 78/193 (40%), Gaps = 65/193 (33%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFG-------------YSK---------------SSLL 66
           HRD+K +N L+D      +K+ DFG             Y K               S + 
Sbjct: 124 HRDIKPDNILIDRDG--HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID 181

Query: 67  HSRPK----------------STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG 110
             R K                S VGTP YIAPEVL R  Y  +L D WS GV LY MLVG
Sbjct: 182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVG 240

Query: 111 AYPF------EDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI- 163
             PF      E Q    N+  T+         IP    +S++  +L+ R+       R+ 
Sbjct: 241 QPPFLADTPAETQLKVINWETTL--------HIPSQAKLSREASDLILRL-CCGAEDRLG 291

Query: 164 --TIKEIKSHPWF 174
                EIK+HP+F
Sbjct: 292 KNGADEIKAHPFF 304

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 80.6 bits (199), Expect = 1e-17
 Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 15/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N +LD      +KI DFG  K ++   +   T  GTP YIAPE+++ +
Sbjct: 119 SKGIIYRDLKLDNVMLDAEG--HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQ 176

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y GK  D W+ GV LY ML G  PF+ +++ + F+     IM      P    +S++  
Sbjct: 177 PY-GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS----IMEHNVSYPK--SLSKEAV 229

Query: 149 NLLSRIFVANPSRRITI-----KEIKSHPWF 174
           ++   +   +P++R+       ++I+ H +F
Sbjct: 230 SICKGLLTKHPAKRLGCGPTGERDIREHAFF 260

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 80.8 bits (199), Expect = 1e-17
 Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 16/156 (10%)

Query: 24  IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPE 83
           IF    S  I +RDLK EN LLD      +K+ DFG++K  ++ +R  +  GTP YIAPE
Sbjct: 143 IFEYLQSLNIVYRDLKPENLLLDKDGF--IKMTDFGFAK--VVDTRTYTLCGTPEYIAPE 198

Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +L    + GK AD W+ G+ +Y +LVG  PF   E    ++K +  I+      P +  +
Sbjct: 199 ILLNVGH-GKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY----FPKF--L 251

Query: 144 SQDCRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
             +C++L+ ++   + ++R        + +K HPWF
Sbjct: 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287

Length = 340

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 80.3 bits (198), Expect = 2e-17
 Identities = 61/175 (34%), Positives = 83/175 (47%), Gaps = 26/175 (14%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           + +RDLKL+N LLD       K+ DFG  K  +L+    +T  GTP YIAPE+L   EY 
Sbjct: 117 VIYRDLKLDNILLDAEG--HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEY- 173

Query: 92  GKLADVWSCGVTLYVMLVGAYPFE-DQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
           G   D W+ GV +Y M+ G  PFE D ED          I+      P  V +S++  ++
Sbjct: 174 GPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFESILHDDVLYP--VWLSKEAVSI 226

Query: 151 LSRIFVANPSRRI-------TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           L      NP++R+           IK HP+F K +   L E       RK  P F
Sbjct: 227 LKAFMTKNPNKRLGCVASQGGEDAIKQHPFF-KEIDWVLLEQ------RKIKPPF 274

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 79.9 bits (197), Expect = 2e-17
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 29/207 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            + I +RDLKL+N LLD       K+ DFG  K  + + +  ST  GTP YIAPE+L   
Sbjct: 114 DKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEM 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y G   D W+ GV LY ML G  PFE + +   F      I+  +   P ++   QD  
Sbjct: 172 LY-GPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILNDEVVYPTWLS--QDAV 224

Query: 149 NLLSRIFVANPSRRITI------KEIKSHPWFLKNLPRELTETAQAIYYRKENPTFS--L 200
           ++L      NP+ R+        + I  HP+F K L  E       +  R+  P F   +
Sbjct: 225 DILKAFMTKNPTMRLGSLTLGGEEAILRHPFF-KELDWEK------LNRRQIEPPFRPRI 277

Query: 201 QSVEEITK----IVEEAKVPPPVSRSI 223
           +S E+++      ++E  V  P+  S+
Sbjct: 278 KSREDVSNFDPDFIKEDPVLTPIEESL 304

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 11/149 (7%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           +I HRD+K  N L++     ++K+CDFG S   L++S  K+ VGT +Y+APE +   +Y 
Sbjct: 121 KIIHRDVKPSNILVNSRG--QIKLCDFGVSGQ-LVNSLAKTFVGTSSYMAPERIQGNDYS 177

Query: 92  GKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFRKTISRIMAVQY---KIPDYVHISQDC 147
            K +D+WS G++L  +  G +P+  + + P    + +  I  V     ++P     S D 
Sbjct: 178 VK-SDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI--VNEPPPRLPSGKF-SPDF 233

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           ++ ++   + +P  R + KE+  HP+  K
Sbjct: 234 QDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 79.7 bits (196), Expect = 3e-17
 Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 22/181 (12%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRPKSTVGTPAYIAPEVLSRRE 89
           + + +RDLKLEN +LD      +KI DFG  K  +   +  K+  GTP Y+APEVL   +
Sbjct: 115 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 172

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +S + ++
Sbjct: 173 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEEIRFPRT--LSPEAKS 225

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVE 204
           LLS +   +P +R+       KEI  H +F            Q +Y +K  P F  Q   
Sbjct: 226 LLSGLLKKDPKQRLGGGPDDAKEIMQHKFF-------AGIVWQDVYEKKLVPPFKPQVTS 278

Query: 205 E 205
           E
Sbjct: 279 E 279

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 79.7 bits (196), Expect = 3e-17
 Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           S    HRD+K +N LLD S    LK+ DFG     +K  ++  R  + VGTP YI+PEVL
Sbjct: 160 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVL 215

Query: 86  SRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH 142
             +    Y G+  D WS GV LY MLVG  PF        + K ++   ++ +  PD   
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF--PDDND 273

Query: 143 ISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
           IS++ +NL+         R  R  ++EIK H +F
Sbjct: 274 ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 79.3 bits (195), Expect = 4e-17
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 22/183 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRPKSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +   +  K+  GTP Y+APEVL   
Sbjct: 113 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 170

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 171 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPR--TLSPEAK 223

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSV 203
           +LL+ +   +P +R+       KE+  H +F       L+   Q +  +K  P F  Q  
Sbjct: 224 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF-------LSINWQDVVQKKLLPPFKPQVT 276

Query: 204 EEI 206
            E+
Sbjct: 277 SEV 279

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 78.0 bits (193), Expect = 5e-17
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 27/153 (17%)

Query: 35  HRDLKLENTLL--DGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           HRD+K  N LL  +G     +K+ DFG S   +   S+  + VGTP ++APEV+ +  YD
Sbjct: 121 HRDIKAANILLSEEGD----VKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYD 176

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-------DYVHIS 144
            K AD+WS G+T   +  G  P  D   P          M V + IP       +    S
Sbjct: 177 EK-ADIWSLGITAIELAKGEPPLSDL-HP----------MRVLFLIPKNNPPSLEGNKFS 224

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           +  ++ +S     +P  R + KE+  H  F+K 
Sbjct: 225 KPFKDFVSLCLNKDPKERPSAKELLKHK-FIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 78.3 bits (194), Expect = 5e-17
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 28/170 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
           S +I HRDLK +N L++      LK+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 116 SHRILHRDLKPQNILINRD--GVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS 173

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQ-------------EDPKNFRK--TI 127
           + Y   + D+WS G     M+ G   F      DQ             E      K    
Sbjct: 174 KHYSTAV-DIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232

Query: 128 SRIMAVQYKIPDYVHIS---QDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                          +     +  +LLS++   NP++RI+ KE   HP+F
Sbjct: 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 78.4 bits (193), Expect = 6e-17
 Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 16/171 (9%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
            I HRD+K  N L++G+   ++K+CDFG S  +L+ S  K+ +G  +Y+APE +     +
Sbjct: 123 NIIHRDVKPTNVLVNGNG--QVKLCDFGVS-GNLVASLAKTNIGCQSYMAPERIKSGGPN 179

Query: 92  GKL-----ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV--HIS 144
                   +DVWS G+++  M +G YP+     P+ +    +++ A+    P  +    S
Sbjct: 180 QNPTYTVQSDVWSLGLSILEMALGRYPYP----PETYANIFAQLSAIVDGDPPTLPSGYS 235

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLK--NLPRELTETAQAIYYRK 193
            D ++ +++     P+RR T  ++  HPW +K  N   ++ E       RK
Sbjct: 236 DDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNADVDMAEWVTGALKRK 286

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 78.3 bits (193), Expect = 7e-17
 Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 27/163 (16%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP----------------KSTVGT 76
           I HRDLK +N L+  +    +K+ DFG SK  L+                    K   GT
Sbjct: 122 IVHRDLKPDNLLI--TSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGT 179

Query: 77  PAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
           P YIAPEV+ R+ Y GK  D W+ G+ LY  LVG  PF      + F + IS       +
Sbjct: 180 PEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS----DDIE 234

Query: 137 IPDYVH-ISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWFL 175
            P+    +  D ++L+SR+   NP  R+      E+K H +FL
Sbjct: 235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 76.6 bits (189), Expect = 2e-16
 Identities = 55/159 (34%), Positives = 74/159 (46%), Gaps = 25/159 (15%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKS-----SLLHSRPKSTVGTPAYIAP 82
           S    HRD+K  N LL  DGS    +KI DFG S S            K+ VGTP ++AP
Sbjct: 120 SNGQIHRDIKAGNILLGEDGS----VKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAP 175

Query: 83  EVLS-RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--- 138
           EV+     YD K AD+WS G+T   +  GA P+      K    T+      Q   P   
Sbjct: 176 EVMEQVHGYDFK-ADIWSFGITAIELATGAAPYSKYPPMKVLMLTL------QNDPPSLE 228

Query: 139 ---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              DY   S+  R ++S     +PS+R T +E+  H +F
Sbjct: 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 9/143 (6%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSR-REY 90
           + HRD+K  N L+  +    +K+CDFG +     +S  +ST VGTP ++APEV++  + Y
Sbjct: 122 VIHRDIKAANILV--TNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
           D K AD+WS G+T+Y M  G  P+ D +    FR  +    +   ++ D    S+  R  
Sbjct: 180 DTK-ADIWSLGITIYEMATGNPPYSDVD---AFRAMMLIPKSKPPRLEDN-GYSKLLREF 234

Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           ++      P  R++ +E+    W
Sbjct: 235 VAACLDEEPKERLSAEELLKSKW 257

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 26/157 (16%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           QI HRD+K  N L+D S   RL+I DFG   ++ L ++           +GT A++APEV
Sbjct: 123 QIIHRDVKGANLLID-STGQRLRIADFG--AAARLAAKGTGAGEFQGQLLGTIAFMAPEV 179

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI------P 138
           L   +Y G+  DVWS G  +  M     P+  ++         S  +A+ +KI      P
Sbjct: 180 LRGEQY-GRSCDVWSVGCVIIEMATAKPPWNAEK--------HSNHLALIFKIASATTAP 230

Query: 139 DY-VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
               H+S   R++  R     P  R   +E+  HP F
Sbjct: 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF 267

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 77.3 bits (190), Expect = 2e-16
 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 12/147 (8%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           I +RDLK EN LLD +    + +CDFG SK++L  ++  +T  GT  Y+APEVL   +  
Sbjct: 117 IVYRDLKPENILLDATG--HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGY 174

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
            K  D WS GV ++ M  G  PF  ++  + +R     I   + + P  V +S + R  +
Sbjct: 175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN----IAFGKVRFPKNV-LSDEGRQFV 229

Query: 152 SRIFVANPSRRI----TIKEIKSHPWF 174
             +   NP  R+       E+K HP+F
Sbjct: 230 KGLLNRNPQHRLGAHRDAVELKEHPFF 256

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 76.2 bits (187), Expect = 3e-16
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 11/153 (7%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R KS VGTP ++APE++S
Sbjct: 134 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS 189

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 190 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPKLK--NLHKVSPS 245

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 76.6 bits (188), Expect = 3e-16
 Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 15/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKSTVGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N +LD      +KI DFG  K ++      K+  GTP YIAPE+++ +
Sbjct: 119 SKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQ 176

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y GK  D W+ GV LY ML G  PFE +++ + F+     IM      P    +S++  
Sbjct: 177 PY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHNVAYPK--SMSKEAV 229

Query: 149 NLLSRIFVANPSRRITI-----KEIKSHPWF 174
            +   +   +P +R+       ++IK H +F
Sbjct: 230 AICKGLMTKHPGKRLGCGPEGERDIKEHAFF 260

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 75.8 bits (186), Expect = 5e-16
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 14/150 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      + + DFG  K ++ H+   ST  GTP Y+APEVL ++
Sbjct: 114 SLNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQ 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            YD +  D W  G  LY ML G  PF  +   + +   +++ + ++   P+   I+   R
Sbjct: 172 PYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---PN---ITNSAR 224

Query: 149 NLLSRIFVANPSRRITIK----EIKSHPWF 174
           +LL  +   + ++R+  K    EIK+H +F
Sbjct: 225 HLLEGLLQKDRTKRLGAKDDFMEIKNHIFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 74.5 bits (183), Expect = 7e-16
 Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 13/145 (8%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSR 87
           ++I HRD+K +N  L       +K+ DFG ++  +L+S     ++ +GTP Y++PE+   
Sbjct: 120 RKILHRDIKSQNIFLTKDGT--IKLGDFGIAR--VLNSTVELARTCIGTPYYLSPEICEN 175

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           R Y+ K +D+W+ G  LY M    + FE      N +  + +I+   Y  P   H S D 
Sbjct: 176 RPYNNK-SDIWALGCVLYEMCTLKHAFE----AGNMKNLVLKIIRGSYP-PVSSHYSYDL 229

Query: 148 RNLLSRIFVANPSRRITIKEIKSHP 172
           RNL+S++F  NP  R ++  I    
Sbjct: 230 RNLVSQLFKRNPRDRPSVNSILEKN 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 75.4 bits (185), Expect = 7e-16
 Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           I +RDLKL+N +LD      +KI DFG  K  ++      T  GTP YIAPE+++ + Y 
Sbjct: 122 IIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPY- 178

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           GK  D W+ GV LY ML G  PF+ +++ + F+     IM      P    +S++  ++ 
Sbjct: 179 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS----IMEHNVSYPK--SLSKEAVSIC 232

Query: 152 SRIFVANPSRRITI-----KEIKSHPWF 174
             +   +PS+R+       ++I+ H +F
Sbjct: 233 KGLMTKHPSKRLGCGPEGERDIREHAFF 260

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 75.8 bits (186), Expect = 9e-16
 Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 19/156 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           S  + HRD+K +N LLD      LK+ DFG      ++ ++     + VGTP YI+PEVL
Sbjct: 160 SMGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDETGMVRC--DTAVGTPDYISPEVL 215

Query: 86  SRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDY 140
             +    Y G+  D WS GV L+ MLVG  PF       +   T S+IM  +  +  P+ 
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY----ADSLVGTYSKIMDHKNSLNFPED 271

Query: 141 VHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
           V IS+  +NL+         R  R  ++EIK HP+F
Sbjct: 272 VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF 307

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 27/170 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  I HRDLK EN L++      LK+ DFG ++S     RP +  V T  Y APE+L   
Sbjct: 116 SHGILHRDLKPENLLINTEGV--LKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD 173

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-----DQ----------EDPKNFRKTISRIMAV 133
           +      D+WS G     +L     F      DQ           DP+ + K  S     
Sbjct: 174 KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233

Query: 134 QYKIPDYVHI---------SQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           ++  P    +         S    +LLS++   +P +RIT ++  +HP+F
Sbjct: 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 17/154 (11%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           +I HRD+K  N L++     ++K+CDFG S   L++S   + VGT  Y++PE +   +Y 
Sbjct: 124 RIMHRDIKPSNILVNS--RGQIKLCDFGVS-GELINSIADTFVGTSTYMSPERIQGGKYT 180

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH--------- 142
            K +DVWS G+++  + +G +PF       + +     I+ +  +I   V          
Sbjct: 181 VK-SDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI---VQEPPPRLPSS 236

Query: 143 -ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
              +D R+ +    + +P+ R T +++ + P F+
Sbjct: 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 74.7 bits (183), Expect = 2e-15
 Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 45/179 (25%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKS-----------SLLHSRPK------------ 71
           HRD+K +N LLD      +K+ DFG               +L H+ P             
Sbjct: 124 HRDIKPDNLLLDAKG--HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK 181

Query: 72  -------------STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE 118
                        STVGTP YIAPEV  +  Y+ KL D WS GV +Y ML+G  PF  + 
Sbjct: 182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSET 240

Query: 119 DPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWF 174
             + +RK ++    + +  P  V IS+  ++L+ R F  +   RI    ++EIKSHP+F
Sbjct: 241 PQETYRKVMNWKETLVF--PPEVPISEKAKDLILR-FCTDSENRIGSNGVEEIKSHPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 72.8 bits (178), Expect = 6e-15
 Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 14/172 (8%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           SQ + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + KS VGTP ++APEV+S
Sbjct: 135 SQGVIHRDIKSDSILLTLDG----RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS 190

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+   + P    K +    +   K+ +   IS  
Sbjct: 191 RTPY-GTEVDIWSLGIMVIEMVDGEPPYF-SDSPVQAMKRLRD--SPPPKLKNAHKISPV 246

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK-NLPRELTETAQAIYYRKENPT 197
            R+ L R+    P  R T +E+  HP+ L+  LP  L    Q   YRK   T
Sbjct: 247 LRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLVPLIQQ--YRKRTST 296

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 72.8 bits (178), Expect = 6e-15
 Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + KS VGTP ++APEV+S
Sbjct: 136 NQGVIHRDIKSDSILLTSDG----RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVIS 191

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ ++   +  R+    +     ++ D   +S  
Sbjct: 192 RLPY-GTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP---RVKDSHKVSSV 247

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R  L  + V  PS+R T +E+  HP FLK
Sbjct: 248 LRGFLDLMLVREPSQRATAQELLQHP-FLK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 71.8 bits (176), Expect = 1e-14
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKSTVGTPAYIAPEVLSRRE 89
           ++I +RDLK EN LLD      ++I D G +       S+ K   GTP ++APE+L   E
Sbjct: 116 RRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE 173

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YD  + D ++ GVTLY M+    PF  + +    ++   RI+      PD    S   ++
Sbjct: 174 YDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPD--KFSPASKS 230

Query: 150 LLSRIFVANPSRRITIK-----EIKSHPWF 174
               +   +P +R+  +      +++HP F
Sbjct: 231 FCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 72.6 bits (178), Expect = 1e-14
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 5/105 (4%)

Query: 72  STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM 131
           STVGTP YIAPE+  ++ Y G+  D WS G  ++  L+G  PF  +   + +RK I+   
Sbjct: 207 STVGTPDYIAPEIFLQQGY-GQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRE 265

Query: 132 AVQYKIPDYVHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
            + +  PD +H+S +  +L+ R+     +R  R    EIKSHP+F
Sbjct: 266 TLYF--PDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFF 308

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 13/151 (8%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVL---- 85
             + HRD+K  N LLD S    +K+CDFG S   L+ S+ K+ + G  AY+APE +    
Sbjct: 134 HGVIHRDVKPSNILLDASG--NVKLCDFGIS-GRLVDSKAKTRSAGCAAYMAPERIDPPD 190

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY-VHIS 144
              +YD + ADVWS G++L  +  G +P+++ +    F + +++I+  +          S
Sbjct: 191 PNPKYDIR-ADVWSLGISLVELATGQFPYKNCK--TEF-EVLTKILQEEPPSLPPNEGFS 246

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
            D  + +      +  +R   +E+  HP+  
Sbjct: 247 PDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 72.7 bits (178), Expect = 1e-14
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 26/199 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAYIAPEVLS 86
           S+++ HRDLK  N  L   P   +K+ DFG+SK    S+      S  GTP Y+APE+  
Sbjct: 187 SRKMMHRDLKSANIFL--MPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWE 244

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y  K AD+WS GV LY +L    PF+        R+ + +++  +Y  P    +S  
Sbjct: 245 RKRYSKK-ADMWSLGVILYELLTLHRPFKGPSQ----REIMQQVLYGKYD-PFPCPVSSG 298

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK---NLPRELTETAQAIYYRKENPTFSLQSV 203
            + LL  +   NP+ R T +++  H  FLK   NL +++   ++ I         S    
Sbjct: 299 MKALLDPLLSKNPALRPTTQQL-LHTEFLKYVANLFQDIVRHSETI---------SPHDR 348

Query: 204 EEITKIVEE--AKVPPPVS 220
           EEI + ++E   + PPP S
Sbjct: 349 EEILRQLQESGERAPPPSS 367

Length = 478

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 71.7 bits (175), Expect = 1e-14
 Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 13/168 (7%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+  + VGTP ++APEV++
Sbjct: 133 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 188

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 189 RKAY-GPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPE--RLSAV 244

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKE 194
            R+ L+R    +  RR + KE+  HP FLK L + L+     I   KE
Sbjct: 245 FRDFLNRCLEMDVDRRGSAKELLQHP-FLK-LAKPLSSLTPLIIAAKE 290

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 38/178 (21%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y 
Sbjct: 120 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY- 175

Query: 92  GKLADVWSCGVTLYVMLVGAYP------------FEDQEDP---KNFRKTIS-------R 129
              +D+WS G++L  M +G YP            F         K   + +S       R
Sbjct: 176 TVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPR 235

Query: 130 IMAVQYKIPDYV-----------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            MA+ +++ DY+             S + ++ + +    NP  R  +KE+  HP+  +
Sbjct: 236 PMAI-FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 71.8 bits (176), Expect = 2e-14
 Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           I +RDLKL+N LLD      +K+ D+G  K  +      ST  GTP YIAPE+L   +Y 
Sbjct: 117 IIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYG 174

Query: 92  GKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
             + D W+ GV ++ M+ G  PF+     D  D          I+  Q +IP    +S  
Sbjct: 175 FSV-DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS--LSVK 231

Query: 147 CRNLLSRIFVANPSRRI------TIKEIKSHPWFLKNLPRELTETAQ 187
             ++L      +P  R+        ++IKSHP+F +N+  +L E  Q
Sbjct: 232 ASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF-RNIDWDLLEQKQ 277

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 70.8 bits (173), Expect = 2e-14
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 14/153 (9%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--RPKSTVGTPAYIAPEVLSRRE- 89
           I +RD+KLEN LLD +    + + DFG SK        R  S  GT  Y+AP+++   + 
Sbjct: 126 IIYRDIKLENILLDSNG--HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDG 183

Query: 90  -YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +D K  D WS GV +Y +L GA PF    +  +  +   RI+  +   P    +S   +
Sbjct: 184 GHD-KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ--EMSALAK 240

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLK 176
           +++ R+ + +P +R+        EIK HP+F K
Sbjct: 241 DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 17/161 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEV---- 84
            + I HRD+K  N L++   A  +KI DFG S+       P  S+VGT AY++PE     
Sbjct: 186 RRHIVHRDIKPSNLLINS--AKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTD 243

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFE--DQEDPKNFRKTISRIMAVQYKIPDY-- 140
           L+   YDG   D+WS GV++    +G +PF    Q D        S + A+    P    
Sbjct: 244 LNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD------WASLMCAICMSQPPEAP 297

Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
              S++ R+ +S      P++R +  ++  HP+ L+  P +
Sbjct: 298 ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQ 338

Length = 353

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
           S++I HRD+K  N  LD      +KI D G +K  S   +   + VGTP Y++PE+   +
Sbjct: 119 SKKILHRDIKSLNLFLDAYD--NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y+ K +DVW+ GV LY    G +PF    D  N    I +I+   +  P     SQ   
Sbjct: 177 PYNEK-SDVWALGVVLYECCTGKHPF----DANNQGALILKIIRGVFP-PVSQMYSQQLA 230

Query: 149 NLLSRIFVANPSRR 162
            L+ +    +  +R
Sbjct: 231 QLIDQCLTKDYRQR 244

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 12/151 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS---LLHSRPKSTVGTPAYIAPEV-- 84
           S+ I HRDLK +N L+D       KI DFG SK S     + +  S  G+  ++APEV  
Sbjct: 126 SKGILHRDLKADNLLVDADGI--CKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIH 183

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV--H 142
              + Y  K+ D+WS G  +  M  G  P+ D+E      K  ++  A    IP  V  +
Sbjct: 184 SYSQGYSAKV-DIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP--PIPPDVSMN 240

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
           +S    + L+  F  NP  R T +E+  HP+
Sbjct: 241 LSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 69.9 bits (172), Expect = 4e-14
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 12/146 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI---APEVLS 86
           S++  HRDL   N L+       +KI DFG S+        +   G    I   APE L 
Sbjct: 123 SKKFVHRDLAARNCLVGEDL--VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLK 180

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
              +  K +DVWS GV L+ +  +GA P+      +   + + +     Y++P   +   
Sbjct: 181 DGIFTSK-SDVWSFGVLLWEIFTLGATPYPGL-SNEEVLEYLRK----GYRLPKPEYCPD 234

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSH 171
           +   L+   +  +P  R T  E+   
Sbjct: 235 ELYELMLSCWQLDPEDRPTFSELVER 260

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 70.3 bits (172), Expect = 4e-14
 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 12/150 (8%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++
Sbjct: 133 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 188

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 189 RKAY-GPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 244

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  HP FLK
Sbjct: 245 FRDFLNRCLEMDVEKRGSAKELLQHP-FLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 70.6 bits (173), Expect = 5e-14
 Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 27/156 (17%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPEVLSRR 88
           HRD+K +N LLD +   RL   DFG    S L      TV      GTP YI+PE+L   
Sbjct: 125 HRDIKPDNVLLDKNGHIRL--ADFG----SCLRLLADGTVQSNVAVGTPDYISPEILQAM 178

Query: 89  EYDGK-----LADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI---PDY 140
           E DGK       D WS GV +Y ML G  PF  +    +  +T  +IM  +      PD 
Sbjct: 179 E-DGKGRYGPECDWWSLGVCMYEMLYGETPFYAE----SLVETYGKIMNHKEHFQFPPDV 233

Query: 141 VHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             +S++ ++L+ R+  +  +R  R  +++ K HP+F
Sbjct: 234 TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF 269

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 70.1 bits (171), Expect = 5e-14
 Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 24/178 (13%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV----GTPAYIAPEVLSRR 88
           I +RDLKL+N LLD      +K+ D+G  K  L   RP  T     GTP YIAPE+L   
Sbjct: 117 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGL---RPGDTTSTFCGTPNYIAPEILRGE 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +Y G   D W+ GV ++ M+ G  PF+     D  D          I+  Q +IP    +
Sbjct: 172 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SL 228

Query: 144 SQDCRNLLSRIFVANPSRRI------TIKEIKSHPWFLKNLPRELTETAQAIYYRKEN 195
           S    ++L      +P  R+         +I+ HP+F +N+  +L E  Q +   K N
Sbjct: 229 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDLMEQKQVVPPFKPN 285

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 36/160 (22%)

Query: 32  QICHRDLKLENTLL--DGSPAPRLKICDFGYS---KSSLLHSRPKSTVGTPAYIAPEVLS 86
           ++ HRD+K +N LL  +      +K+ DFG S    S+L   R  + +GTP ++APEV++
Sbjct: 133 KVIHRDIKGQNILLTKNA----EVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIA 186

Query: 87  -----RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
                   YD + +DVWS G+T   +  G  P  D   P          M   +KIP   
Sbjct: 187 CDEQPDASYDAR-SDVWSLGITAIELADGKPPLCDMH-P----------MRALFKIPRNP 234

Query: 142 --------HISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                   + S+   + +S   + N  +R  ++E+  HP+
Sbjct: 235 PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 68.4 bits (167), Expect = 2e-13
 Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 4/85 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S +I HRD+K  N L++     ++K+CDFG S + L++S  K+ VGT AY+APE +S  +
Sbjct: 113 SLKILHRDVKPSNMLVNTRG--QVKLCDFGVS-TQLVNSIAKTYVGTNAYMAPERISGEQ 169

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPF 114
           Y G  +DVWS G++   + +G +P+
Sbjct: 170 Y-GIHSDVWSLGISFMELALGRFPY 193

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 68.1 bits (166), Expect = 2e-13
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 14/148 (9%)

Query: 31  QQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSR--PKSTVGTPAYIAPEVLS 86
           ++I HRD+K +N  L  +G  A   K+ DFG ++  L  S     + VGTP Y++PE+  
Sbjct: 120 RKILHRDIKSQNIFLSKNGMVA---KLGDFGIARQ-LNDSMELAYTCVGTPYYLSPEICQ 175

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            R Y+ K  D+WS G  LY +    +PFE      N  + + +I    +  P   + S+D
Sbjct: 176 NRPYNNK-TDIWSLGCVLYELCTLKHPFEGN----NLHQLVLKICQGYFA-PISPNFSRD 229

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWF 174
            R+L+S++F  +P  R +I  I   P+ 
Sbjct: 230 LRSLISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 34/162 (20%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPK--STVGTPAYIAPEVL 85
           S ++ HRDLK  N LL  DG     +K+ DFG S +    +  K  + +GTP ++APEV+
Sbjct: 121 SHKVIHRDLKAGNILLTLDGD----VKLADFGVS-AKNKSTLQKRDTFIGTPYWMAPEVV 175

Query: 86  -----SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY 140
                    YD K AD+WS G+TL  +     P  +              M V  KI   
Sbjct: 176 ACETFKDNPYDYK-ADIWSLGITLIELAQMEPPHHELN-----------PMRVLLKILKS 223

Query: 141 --------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                      S    + L    V +P  R T  E+  HP+ 
Sbjct: 224 EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK--STVGTPAYIAPEVLSR 87
           S +  HRD+K  N LL+       K+ DFG S   L  +  K  + +GTP ++APEV+  
Sbjct: 117 SNKKIHRDIKAGNILLNEEGQA--KLADFGVS-GQLTDTMAKRNTVIGTPFWMAPEVIQE 173

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             Y+ K AD+WS G+T   M  G  P+ D   P      I          P+    S + 
Sbjct: 174 IGYNNK-ADIWSLGITAIEMAEGKPPYSDIH-PMRAIFMIPNKPPPTLSDPE--KWSPEF 229

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            + + +  V +P  R +  ++  HP+ 
Sbjct: 230 NDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 52/184 (28%), Positives = 71/184 (38%), Gaps = 52/184 (28%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK----STVGTPAYIAPEVLSRR 88
           I HRDLK  N L+       LK+ DFG ++S      P       V T  Y APE+L   
Sbjct: 123 ILHRDLKPNNLLIA--SDGVLKLADFGLARS---FGSPNRKMTHQVVTRWYRAPELLFGA 177

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF------EDQEDPKNFRKTISRIMAV--------- 133
            + G   D+WS G     +L+   PF       DQ         + +I            
Sbjct: 178 RHYGVGVDMWSVGCIFAELLLRV-PFLPGDSDIDQ---------LGKIFEALGTPTEENW 227

Query: 134 --QYKIPDYV---------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
                +PDYV                 S D  +LL R+   NP++RIT ++   HP+F  
Sbjct: 228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF-S 286

Query: 177 NLPR 180
           N P 
Sbjct: 287 NDPA 290

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 67.6 bits (165), Expect = 3e-13
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 19/153 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--------RPKSTVGTPAYIA 81
           ++ I HRD+K  N L+D      +KI DFG SK    +S        RP S  G+  ++A
Sbjct: 124 NRGIIHRDIKGANILVDNKGG--IKISDFGISKKLEANSLSTKTNGARP-SLQGSVFWMA 180

Query: 82  PEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA-VQYKIPDY 140
           PEV+ +  Y  K AD+WS G  +  ML G +PF D        + I +I      +IP  
Sbjct: 181 PEVVKQTSYTRK-ADIWSLGCLVVEMLTGKHPFPDC----TQLQAIFKIGENASPEIPS- 234

Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
            +IS +  + L + F  + ++R T  E+  HP+
Sbjct: 235 -NISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 67.4 bits (164), Expect = 3e-13
 Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 12/148 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SLLHSRPKSTVGTPAYIAPEVL 85
           S  I HRD+K  N L D   A  +K+ DFG SK      +  +  +S  GTP +++PEV+
Sbjct: 124 SNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVI 181

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           S   Y G+ ADVWS G T+  ML    P+ + E        I +I           HIS+
Sbjct: 182 SGEGY-GRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHISE 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             R+ L  IFV     R + +E+  HP+
Sbjct: 237 HARDFLGCIFV-EARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 37/176 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----VGTPAYIAPEV- 84
           S  + HRDLK  N LL+      LKICDFG ++ +             V T  Y APE+ 
Sbjct: 124 SANVLHRDLKPSNLLLNT--NCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM 181

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGA--YPFED----------------QEDPKNFRKT 126
           L+ + Y  K  D+WS G  L  ML     +P +D                QED       
Sbjct: 182 LNSKGYT-KAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240

Query: 127 ISR--IMAVQYKIPDYVHISQDCRN-------LLSRIFVANPSRRITIKEIKSHPW 173
            +R  I ++ +K    V  ++   N       LL ++   NP +RIT++E  +HP+
Sbjct: 241 RARNYIKSLPFK--PKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 67.2 bits (164), Expect = 4e-13
 Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 12/148 (8%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSR-- 87
            QI HRD+K +N L++ + +  +KI DFG SK  + ++   ++  GT  Y+APEV+ +  
Sbjct: 127 NQIVHRDIKGDNVLVN-TYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGP 185

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN--FRKTISRIMAVQYKIPDYVHISQ 145
           R Y G  AD+WS G T+  M  G  PF +  +P+   F+  + +I     +IP+   +S 
Sbjct: 186 RGY-GAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP---EIPE--SLSA 239

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
           + +N + R F  +P +R +  ++   P+
Sbjct: 240 EAKNFILRCFEPDPDKRASAHDLLQDPF 267

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 68.4 bits (167), Expect = 4e-13
 Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 26/192 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
           S+ + HRD+K  N LL  +    +K+ DFG+SK   +++     ++  GTP Y+APE+  
Sbjct: 161 SKHMIHRDIKSANILLCSNGL--VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWR 218

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYVHISQ 145
           R+ Y  K AD++S GV LY +L    PF    D +N  + + + +A +Y  +P    IS 
Sbjct: 219 RKPYSKK-ADMFSLGVLLYELLTLKRPF----DGENMEEVMHKTLAGRYDPLPP--SISP 271

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHP---WFLKNLPRELTETAQAIYYRKENPTFSLQS 202
           + + +++ +  ++P RR +  ++ + P    F+  L  E+ +T          P FS   
Sbjct: 272 EMQEIVTALLSSDPKRRPSSSKLLNMPICKLFISGL-LEIVQTQ---------PGFSGPL 321

Query: 203 VEEITKIVEEAK 214
            + I++ +++ K
Sbjct: 322 RDTISRQIQQTK 333

Length = 496

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 67.2 bits (164), Expect = 5e-13
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 10/150 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++I +RDLK EN LLD      ++I D G +         +  VGT  Y+APEV+    
Sbjct: 120 RERIVYRDLKPENILLDDY--GHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNER 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y     D W  G  +Y M+ G  PF  +++     +   R+   Q +  +    S+  R+
Sbjct: 178 Y-TFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSE--KFSEAARS 234

Query: 150 LLSRIFVANPSRRITIK-----EIKSHPWF 174
           +  ++   +P  R+  +     E+K+HP+F
Sbjct: 235 ICRQLLTKDPGFRLGCRGEGAEEVKAHPFF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 67.1 bits (163), Expect = 5e-13
 Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 13/168 (7%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           + Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+  + VGTP ++APEV++
Sbjct: 133 ANQVIHRDIKSDNVLLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 188

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 189 RKAY-GPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSPI 244

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKE 194
            R+ L+R    +  +R + KE+  HP FLK L + L+     I   KE
Sbjct: 245 FRDFLNRCLEMDVEKRGSAKELLQHP-FLK-LAKPLSSLTPLILAAKE 290

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 66.7 bits (163), Expect = 5e-13
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSLLHSRPKSTVGTPAYIAPEV 84
           S++I HRD+K  N  +  +    +K+ D G      SK++  HS     VGTP Y++PE 
Sbjct: 124 SKRIMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHSL----VGTPYYMSPER 177

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           +    Y+ K +D+WS G  LY M     PF    D  N      +I    Y      H S
Sbjct: 178 IHENGYNFK-SDIWSLGCLLYEMAALQSPFY--GDKMNLYSLCKKIEKCDYPPLPADHYS 234

Query: 145 QDCRNLLSRIFVANPSRRITIKEI 168
           ++ R+L+SR    +P +R  I  +
Sbjct: 235 EELRDLVSRCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 66.6 bits (162), Expect = 6e-13
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SLLHSRPKSTVGTPAYIAPEVL 85
           S  I HRD+K  N L D   A  +K+ DFG SK      +  +  KS  GTP +++PEV+
Sbjct: 124 SNMIVHRDIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVI 181

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           S   Y G+ ADVWS   T+  ML    P+ + E      K  ++    +  +PD   +S 
Sbjct: 182 SGEGY-GRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQ--PTKPMLPD--GVSD 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHP 172
            CR+ L +IFV    RR T + +  HP
Sbjct: 237 ACRDFLKQIFVEE-KRRPTAEFLLRHP 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 66.5 bits (163), Expect = 6e-13
 Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 38/173 (21%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVL-SRRE 89
           I HRDLK  N L+  S    LKI DFG ++  S          V T  Y APE+L   R+
Sbjct: 120 IMHRDLKPANLLI--SADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARK 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV----------QYK-IP 138
           YD    D+W+ G     +L G+  F  + D +     ++ +                 +P
Sbjct: 178 YDP-GVDLWAVGCIFAELLNGSPLFPGENDIEQ----LAIVFRTLGTPNEETWPGLTSLP 232

Query: 139 DYVHISQ-------------DCR----NLLSRIFVANPSRRITIKEIKSHPWF 174
           DY  I+              D      +LL  + V +PS+R++  E   HP+F
Sbjct: 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 66.1 bits (161), Expect = 7e-13
 Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 14/146 (9%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV--GTPAYIAPEVLSRR 88
           ++I HRDLK +N  L  +    LKI DFG S+  L+ S   +T   GTP Y++PE L  +
Sbjct: 125 RRILHRDLKAKNIFLKNN---LLKIGDFGVSRL-LMGSCDLATTFTGTPYYMSPEALKHQ 180

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIPDYVHISQDC 147
            YD K +D+WS G  LY M   A+ FE Q    NF   + RI+      +P+    S+  
Sbjct: 181 GYDSK-SDIWSLGCILYEMCCLAHAFEGQ----NFLSVVLRIVEGPTPSLPE--TYSRQL 233

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
            +++  +   +PS R +  EI  +P+
Sbjct: 234 NSIMQSMLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 66.6 bits (162), Expect = 9e-13
 Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 20/204 (9%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV--GTPAYIAPEVLSRR 88
               HRD+K +N LLD +   RL   DFG           +S+V  GTP YI+PE+L   
Sbjct: 121 LHYVHRDIKPDNVLLDMNGHIRL--ADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAM 178

Query: 89  EYD----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM--AVQYKIPDYV- 141
           E      G   D WS GV +Y ML G  PF  +    +  +T  +IM    +++ P ++ 
Sbjct: 179 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE----SLVETYGKIMNHEERFQFPSHIT 234

Query: 142 HISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
            +S++ ++L+ R+ + +  RR+    I++ K H +F + +  E     +A Y    +   
Sbjct: 235 DVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF-EGIDWENIRNLEAPYIPDVSSPS 292

Query: 199 SLQSVEEITKIVEEAKVPPPVSRS 222
              + +    ++   ++ PP S +
Sbjct: 293 DTSNFDVDDDVLRNPEIAPPSSHT 316

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 66.2 bits (161), Expect = 9e-13
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 11/136 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SLLHSRPKSTVGTPAYIAPEVL 85
           S  I HRD+K  N L D      +K+ DFG SK      L  +  KS  GTP +++PEV+
Sbjct: 124 SNMIVHRDIKGANILRDS--VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI 181

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           S   Y G+ AD+WS G T+  ML    P+ + E      K  ++       +P   H+S 
Sbjct: 182 SGEGY-GRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ--PTNPVLP--PHVSD 236

Query: 146 DCRNLLSRIFVANPSR 161
            CR+ L RIFV    R
Sbjct: 237 HCRDFLKRIFVEAKLR 252

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 66.6 bits (162), Expect = 1e-12
 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 45/179 (25%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKS-----------SLLHSRPK------------ 71
           HRD+K +N LLD      +K+ DFG               +L HS P             
Sbjct: 124 HRDIKPDNLLLDSKG--HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK 181

Query: 72  -------------STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE 118
                        STVGTP YIAPEV  +  Y+ KL D WS GV +Y ML+G  PF  + 
Sbjct: 182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSET 240

Query: 119 DPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWF 174
             + ++K ++    + +  P  V IS+  ++L+ R F      RI    ++EIK++P+F
Sbjct: 241 PQETYKKVMNWKETLIF--PPEVPISEKAKDLILR-FCCEWEHRIGAPGVEEIKTNPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 66.1 bits (161), Expect = 1e-12
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 21/152 (13%)

Query: 33  ICHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR- 87
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 170

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             YD   AD +S G  L+ +L G  PF  Q   K+  +     + +  ++PD    S + 
Sbjct: 171 VAYDSS-ADWFSLGCMLFKLLRGHSPFR-QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 226

Query: 148 RNLLSRIFVANPSRRITI-----KEIKSHPWF 174
           R+LL  +   + +RR+       +E+K HP+F
Sbjct: 227 RSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 65.6 bits (161), Expect = 1e-12
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 19/154 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
              I H D+KLEN L D +   R+ +CD+G  K         S   GT  Y +PE +   
Sbjct: 127 KHNIIHNDIKLENVLYDRA-KDRIYLCDYGLCK----IIGTPSCYDGTLDYFSPEKIKGH 181

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQED----PKNFRKTISRIMAVQYKIPDYVHIS 144
            YD    D W+ GV  Y +L G +PF++ ED     ++  K   +      K+P   ++S
Sbjct: 182 NYDVSF-DWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK------KLPFIKNVS 234

Query: 145 QDCRNLLSRIFVANPSRR-ITIKEIKSHPWFLKN 177
           ++  + +  +   N + R     EI  HP FLK 
Sbjct: 235 KNANDFVQSMLKYNINYRLTNYNEIIKHP-FLKI 267

Length = 267

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 66.2 bits (161), Expect = 1e-12
 Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 16/167 (9%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRREYD 91
           I +RDLKL+N LLD      +K+ D+G  K  L      ST  GTP YIAPE+L   EY 
Sbjct: 117 IIYRDLKLDNVLLDADG--HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEY- 173

Query: 92  GKLADVWSCGVTLYVMLVGAYPFE---DQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           G   D W+ GV ++ M+ G  PF+   D  D          I+    +IP +  +S    
Sbjct: 174 GFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF--LSVKAS 231

Query: 149 NLLSRIFVANPSRRITIK------EIKSHPWFLKNLPRELTETAQAI 189
           ++L      +P  R+  +      +IKSH +F +++  +L E  Q  
Sbjct: 232 HVLKGFLNKDPKERLGCQPQTGFSDIKSHTFF-RSIDWDLLEKKQVT 277

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRD+K  N  L  + A  +K+ DFG SK   S    +  ++ VGTP Y++PE+    +
Sbjct: 122 ILHRDIKTLNIFL--TKAGLIKLGDFGISKILGSEYSMA--ETVVGTPYYMSPELCQGVK 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K +D+W+ G  LY +L     F    D  N    + +I+   Y     V+ S +  +
Sbjct: 178 YNFK-SDIWALGCVLYELLTLKRTF----DATNPLNLVVKIVQGNYTPVVSVY-SSELIS 231

Query: 150 LLSRIFVANPSRRITIKEIKSHP 172
           L+  +   +P +R T  E+   P
Sbjct: 232 LVHSLLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 65.8 bits (160), Expect = 2e-12
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 14/150 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      + + DFG  K  +  S   +T  GTP Y+APEV+ ++
Sbjct: 114 SINIVYRDLKPENILLDSQG--HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQ 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            YD    D W  G  LY ML G  PF  ++  + +   + + + ++   P     S    
Sbjct: 172 PYD-NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR---PG---ASLTAW 224

Query: 149 NLLSRIFVANPSRRITIK----EIKSHPWF 174
           ++L  +   +  RR+  K    EI+ HP+F
Sbjct: 225 SILEELLEKDRQRRLGAKEDFLEIQEHPFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 65.8 bits (160), Expect = 2e-12
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 14/150 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      + + DFG  K  +      ST  GTP Y+APEVL + 
Sbjct: 114 SLNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKE 171

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            YD +  D W  G  LY ML G  PF  ++  + +   + + + +             C 
Sbjct: 172 PYD-RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAA-----C- 224

Query: 149 NLLSRIFVANPSRRITIK----EIKSHPWF 174
           +LL  +   +  RR+  K    EIK+H +F
Sbjct: 225 DLLVGLLHKDQRRRLGAKADFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 65.8 bits (160), Expect = 2e-12
 Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 17/111 (15%)

Query: 72  STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF------EDQEDPKNFRK 125
           S VGTP YIAPEVL R+ Y  +L D WS GV L+ MLVG  PF      E Q    N+  
Sbjct: 207 SLVGTPNYIAPEVLLRKGYT-QLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN 265

Query: 126 TISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
           T+         IP  V +S +  +L++++  +   R  R    +IK+HP+F
Sbjct: 266 TL--------HIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFF 308

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 65.1 bits (158), Expect = 3e-12
 Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 12/150 (8%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+  + VGTP ++APEV++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 189

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 190 RKAY-GPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 245

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  H  FLK
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQ-FLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 65.1 bits (158), Expect = 4e-12
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV--GTPAYIAPEVLSRREYDG 92
           HRD+K +N L+D +   RL   DFG     +     +S+V  GTP YI+PE+L   E DG
Sbjct: 125 HRDIKPDNILMDMNGHIRL--ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME-DG 181

Query: 93  K-----LADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           K       D WS GV +Y ML G  PF  +   + + K ++     Q+       +S+D 
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP-AQVTDVSEDA 240

Query: 148 RNLLSRIFVANPSR--RITIKEIKSHPWF 174
           ++L+ R+  +   R  +  I++ K HP+F
Sbjct: 241 KDLIRRLICSREHRLGQNGIEDFKQHPFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 64.7 bits (157), Expect = 4e-12
 Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 12/150 (8%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+    Y
Sbjct: 121 ERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 178

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA-VQYKIPDYVHISQDCRN 149
                D W+ G  LY M+ G  PF+ Q   K  R+ + R++  VQ +  +    S D R+
Sbjct: 179 TFS-PDWWALGCLLYEMIAGQSPFQ-QRKKKIKREEVERLVKEVQEEYSE--KFSPDARS 234

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWF 174
           L   +   +P  R+       +E+K HP F
Sbjct: 235 LCKMLLCKDPKERLGCQGGGAREVKEHPLF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 64.9 bits (159), Expect = 4e-12
 Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 39/175 (22%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----VGTPAYIAPEV-LSR 87
           + HRDLK  N L++ +    LKICDFG ++        K      V T  Y APE+ LS 
Sbjct: 124 VIHRDLKPSNILVNSNCD--LKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSS 181

Query: 88  REYDGKLADVWSCGVTLYVML---------------------VGAYPFED--QEDPKNFR 124
             Y  K  D+WS G     +L                     +G    ED      +  R
Sbjct: 182 SRYT-KAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKAR 240

Query: 125 KTISRIMAVQYK-----IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             +  +     K      P     S +  +LL ++ V +P +RIT  E  +HP+ 
Sbjct: 241 NYLKSLPKKPKKPLSKLFPG---ASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 64.5 bits (158), Expect = 4e-12
 Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 56/179 (31%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSRREYDG 92
           HRDLK EN L+  S    +KI DFG ++   + SRP  T  V T  Y APE+L R     
Sbjct: 122 HRDLKPENLLV--SGPEVVKIADFGLARE--IRSRPPYTDYVSTRWYRAPEILLRSTSYS 177

Query: 93  KLADVWSCGVTLYVMLVGAYPFE---------DQEDPKNFRKTISRIMAV---------- 133
              D+W+ G     ++   Y            DQ         + +I +V          
Sbjct: 178 SPVDIWALG----CIMAELYTLRPLFPGSSEIDQ---------LYKICSVLGTPTKQDWP 224

Query: 134 ---------QYKIPDYVHI---------SQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                     ++ P +            S +  +L+  +   +P +R T  +   HP+F
Sbjct: 225 EGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 64.4 bits (157), Expect = 5e-12
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 14/154 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S++I HRD+K  N LL       +K+CDFG S   L++S   +  GT  Y+APE +  + 
Sbjct: 123 SRKIIHRDIKPSNILLTRKGQ--VKLCDFGVS-GELVNSLAGTFTGTSFYMAPERIQGKP 179

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKNFRKTISRIMAVQYKIP-------DYV 141
           Y    +DVWS G+TL  +    +PF  + E P    + +S I  V    P       + +
Sbjct: 180 YSIT-SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYI--VNMPNPELKDEPGNGI 236

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
             S++ ++ + +    +P+RR T  ++  HPW  
Sbjct: 237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 9/141 (6%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I HRDL   N +L      ++ I DFG +K     S+  S VGT  Y  PE++    Y
Sbjct: 133 KRIVHRDLTPNNIML--GEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPY 190

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYVHISQDCRN 149
            G+ ADVW+ G  LY M     PF       N     ++I+   Y+ +P+ ++ S+D  +
Sbjct: 191 -GEKADVWAFGCILYQMCTLQPPFYST----NMLSLATKIVEAVYEPLPEGMY-SEDVTD 244

Query: 150 LLSRIFVANPSRRITIKEIKS 170
           +++     +   R  I ++ +
Sbjct: 245 VITSCLTPDAEARPDIIQVSA 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 38/173 (21%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S +I HRDLK +N L+  DG    ++KI DFG ++         S V T  Y APEVL +
Sbjct: 125 SHRIVHRDLKPQNILVTSDG----QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQ 180

Query: 88  REYDGKLADVWSCGVTLYVM--LVGAYP-----------FE-----DQED-PKN------ 122
             Y   + D+WS G     +      +            F+      +E+ P+N      
Sbjct: 181 SSYATPV-DMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239

Query: 123 -FRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            F     R       +P+   I ++  +LL ++   NP +RI+  E   HP+F
Sbjct: 240 SFPSYTPRSFKSF--VPE---ICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 8/87 (9%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL--SRR 88
           +I HRD+K  N LLD +    +K+CDFG S   L+ S  K+   G   Y+APE +  S R
Sbjct: 128 KIIHRDVKPSNILLDRNGN--IKLCDFGIS-GQLVDSIAKTRDAGCRPYMAPERIDPSAR 184

Query: 89  E-YDGKLADVWSCGVTLYVMLVGAYPF 114
           + YD + +DVWS G+TLY +  G +P+
Sbjct: 185 DGYDVR-SDVWSLGITLYEVATGKFPY 210

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 61.8 bits (151), Expect = 3e-11
 Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 17/145 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG-----YSKSSLLHSRPKSTVGTPAYIAPEV 84
           S+   HRDL   N L+  +    +KI DFG     Y          K  +    ++APE 
Sbjct: 121 SKNFIHRDLAARNCLVGEN--LVVKISDFGLSRDLYDDDYYKVKGGKLPI---RWMAPES 175

Query: 85  LSRREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L   ++  K +DVWS GV L+ +  +G  P+       +  + +  +    Y++P   + 
Sbjct: 176 LKEGKFTSK-SDVWSFGVLLWEIFTLGEEPYPG----MSNAEVLEYLKK-GYRLPKPPNC 229

Query: 144 SQDCRNLLSRIFVANPSRRITIKEI 168
             +   L+ + +  +P  R T  E+
Sbjct: 230 PPELYKLMLQCWAEDPEDRPTFSEL 254

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 34/169 (20%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSRREY 90
           I HRD+K EN L+       LK+ DFG  +   ++S+P  T  + T  Y APE L    Y
Sbjct: 121 IFHRDIKPENILIKDD---ILKLADFGSCRG--IYSKPPYTEYISTRWYRAPECLLTDGY 175

Query: 91  DGKLADVWSCGVTLYVM--LVGAYPFEDQED-----------PK---NFRKTISRIMAVQ 134
            G   D+W+ G   + +  L   +P  ++ D           P      +   SR M   
Sbjct: 176 YGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM--N 233

Query: 135 YKIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           Y  P            + S +  +LL ++   +P  RIT K+   HP+F
Sbjct: 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 61.5 bits (149), Expect = 4e-11
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 15/136 (11%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS----TVGTPAYIAPEVLS 86
           +++ HRD+K +N  L  +   ++K+ DFG   S+ L + P +     VGTP Y+ PE+  
Sbjct: 119 KRVLHRDIKSKNIFL--TQNGKVKLGDFG---SARLLTSPGAYACTYVGTPYYVPPEIWE 173

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
              Y+ K +D+WS G  LY +    +PF+      +++  I ++    YK P   H S +
Sbjct: 174 NMPYNNK-SDIWSLGCILYELCTLKHPFQ----ANSWKNLILKVCQGSYK-PLPSHYSYE 227

Query: 147 CRNLLSRIFVANPSRR 162
            R+L+ ++F  NP  R
Sbjct: 228 LRSLIKQMFKRNPRSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 12/145 (8%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPE----VLSRRE 89
           HRD+K  N L++     ++K+CDFG S   L+ S  K+   G   Y+APE     L+++ 
Sbjct: 127 HRDVKPSNVLIN--RNGQVKLCDFGIS-GYLVDSVAKTIDAGCKPYMAPERINPELNQKG 183

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YD K +DVWS G+T+  +  G +P++  + P  F++    +     ++P     S + ++
Sbjct: 184 YDVK-SDVWSLGITMIELATGRFPYDSWKTP--FQQLKQVVEEPSPQLPAE-KFSPEFQD 239

Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
            +++    N   R    E+  HP+F
Sbjct: 240 FVNKCLKKNYKERPNYPELLQHPFF 264

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVL-SRRE 89
           ++ HRDLK +N L++      LK+ DFG +++  +  +   + V T  Y AP+VL   R 
Sbjct: 120 RVLHRDLKPQNLLINKRG--ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRT 177

Query: 90  YDGKLADVWSCGVTLYVMLVGA--YPFEDQEDP--KNFR----------KTISRIMAVQY 135
           Y   + D+WS G  +  M+ G   +P  + ED   K FR            IS++   + 
Sbjct: 178 YSTSI-DIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236

Query: 136 KIPDYVHISQ---------DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             P Y                 +LL R+   NP  RI+  +   HPWF
Sbjct: 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 61.6 bits (150), Expect = 5e-11
 Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 32/173 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRPKSTVGTPAYIAPEV-LSR 87
           S  + HRDLK  N LL+ +    LKICDFG ++ +S         V T  Y APE+ L+ 
Sbjct: 126 SANVLHRDLKPSNLLLNANC--DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC 183

Query: 88  REYDGKLADVWSCG---------------------VTLYVMLVGAYPFEDQE--DPKNFR 124
            EY     DVWS G                     + L   L+G+   ED      +  R
Sbjct: 184 SEY-TTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR 242

Query: 125 KTISRIMAVQYKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           + I R +    +      + H +    +LL ++ V +PS+RIT++E  +HP+ 
Sbjct: 243 RYI-RSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 61.9 bits (150), Expect = 5e-11
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 72  STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM 131
           S VGTP YIAPEVL R  Y  +L D WS GV LY MLVG  PF  Q   +   K I+   
Sbjct: 207 SLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT 265

Query: 132 AVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWF 174
           ++   IP    +S +  +L+ ++    P  R+      EIK+HP+F
Sbjct: 266 SLH--IPPQAKLSPEASDLIIKL-CRGPEDRLGKNGADEIKAHPFF 308

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 61.0 bits (149), Expect = 5e-11
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 17/147 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG-----YSKSSLLHSRPKSTVGTPAYIAPEV 84
           S+   HRDL   N L+  +    +KI DFG     Y          K  +    ++APE 
Sbjct: 120 SKNFIHRDLAARNCLVGENL--VVKISDFGLSRDLYDDDYYRKRGGKLPI---RWMAPES 174

Query: 85  LSRREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L   ++  K +DVWS GV L+ +  +G  P+       +  + +  +    Y++P   + 
Sbjct: 175 LKEGKFTSK-SDVWSFGVLLWEIFTLGEQPYPG----MSNEEVLEYLKN-GYRLPQPPNC 228

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKS 170
             +  +L+ + +  +P  R T  E+  
Sbjct: 229 PPELYDLMLQCWAEDPEDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 60.8 bits (147), Expect = 7e-11
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I +RDLK EN LLD      ++I D G +         +  VGT  Y+APEV++  +Y
Sbjct: 121 ERIVYRDLKPENILLDDRG--HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKY 178

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
                D W  G  +Y M+ G  PF  +++     +   R+   Q +  +    S+D +++
Sbjct: 179 TFS-PDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSE--KFSEDAKSI 235

Query: 151 LSRIFVANPSRRITIK-----EIKSHPWF 174
              +   NP  R+  +      +K HP F
Sbjct: 236 CRMLLTKNPKERLGCRGNGAAGVKQHPIF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (148), Expect = 7e-11
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS---KSSLLHSRPKSTVGTPAYIAPEV 84
                HRD+K  N LL  DG     +K+ DFG S    +++  ++ KS +GTP ++APEV
Sbjct: 119 ETGKIHRDIKGANILLTEDGD----VKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEV 172

Query: 85  L---SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
                +  YDGK  D+W+ G+T   +     P  D   P      IS+      K+ D  
Sbjct: 173 AAVERKGGYDGK-CDIWALGITAIELAELQPPMFDL-HPMRALFLISKSNFPPPKLKDKE 230

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHP 172
             S    + + +    +P +R T  ++  HP
Sbjct: 231 KWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 37/178 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SLLHSRPKST--VGTPAYIAPE 83
           S  + HRDLK  N LL+     R+K+ DFG ++S          P  T  V T  Y APE
Sbjct: 125 SGNVIHRDLKPSNILLNS--DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE 182

Query: 84  VL--SRREYDGKLADVWSCGVTLYVMLVGAYPF---------------------EDQEDP 120
           +L  S R Y  K  D+WS G  L  ML+G   F                     ED E  
Sbjct: 183 ILLGSTR-YT-KGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESI 240

Query: 121 K-NFRKTISRIMAVQYK--IPDYV-HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           K  F  T+   +  + +  + + +   S D  +LL ++ V NP++R+T +E   HP+ 
Sbjct: 241 KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 32/173 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVL-S 86
           S  I HRD+K  N L++ +    LKICDFG ++          T  V T  Y APE+L  
Sbjct: 121 SAGILHRDIKPGNLLVNSNC--VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG 178

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-------------AV 133
            R Y   + D+WS G     +L     F+ Q   +        +              A 
Sbjct: 179 SRHYTSAV-DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237

Query: 134 QY------KIPD----YVHISQDCR---NLLSRIFVANPSRRITIKEIKSHPW 173
            +      K P     Y   SQ      +LL R+ V +P +RI+  +  +HP+
Sbjct: 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 59.3 bits (143), Expect = 2e-10
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 21/155 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S++  HRD+K  N LL  S    +K+ DFG + + +    +  + VGTP ++APEV+ + 
Sbjct: 119 SEKKIHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 176

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV------H 142
            YD K AD+WS G+T   +  G  P  D              M V + IP          
Sbjct: 177 AYDSK-ADIWSLGITAIELAKGEPPNSDMHP-----------MRVLFLIPKNNPPTLTGE 224

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            S+  +  +      +PS R T KE+  H + +KN
Sbjct: 225 FSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 59.3 bits (143), Expect = 3e-10
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            QI HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 123 HQIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 179

Query: 91  DGKLADVWSCGVTLYVMLVGAYP 113
             + +D+WS G++L  + +G YP
Sbjct: 180 SVQ-SDIWSMGLSLVELAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 58.5 bits (141), Expect = 4e-10
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 21/152 (13%)

Query: 33  ICHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR- 87
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 170

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             YD   AD +S G  L+ +L G  PF  Q   K+  +     + V  ++PD    S + 
Sbjct: 171 TAYDSS-ADWFSLGCMLFKLLRGHSPFR-QHKTKDKHEIDRMTLTVNVELPD--SFSPEL 226

Query: 148 RNLLSRIFVANPSRRITI-----KEIKSHPWF 174
           ++LL  +   + S+R+       +E+K H +F
Sbjct: 227 KSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 35/186 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSR-PKSTVGTPAYIAPEV 84
           S  + HRDLK  N L++      L+I DFG     S S   H       V T  Y APE+
Sbjct: 125 SANVIHRDLKPSNLLVNED--CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPEL 182

Query: 85  L-SRREYDGKLADVWSCGVTLYVMLVGA--YPFEDQED------------PKNFRKTIS- 128
           L S  EY   + D+WS G     ML     +P ++                +     I  
Sbjct: 183 LLSLPEYTTAI-DMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241

Query: 129 -RIMAVQYKIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL 178
            R+      +P          +   S +  +LLS++   +P  RIT+++   HP FL   
Sbjct: 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP-FLAQY 300

Query: 179 PRELTE 184
                E
Sbjct: 301 HDPDDE 306

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 58.7 bits (142), Expect = 5e-10
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 5/90 (5%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           Q+I HRD+K EN  ++     ++ I D G ++  ++        GT    APEVL+R +Y
Sbjct: 176 QRIIHRDVKTENIFIND--VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKY 233

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDP 120
           + K AD+WS G+ L+ ML  AYP    EDP
Sbjct: 234 NSK-ADIWSAGIVLFEML--AYPSTIFEDP 260

Length = 357

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 58.1 bits (141), Expect = 6e-10
 Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 53/180 (29%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVL-SRREY 90
           I HRDLK+ N LL       LKI DFG +++  L ++P +  V T  Y APE+L     Y
Sbjct: 129 IIHRDLKVSNLLLTDKGC--LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTY 186

Query: 91  DGKLADVWSCG---------------------VTLYVMLVGA-----YP----------F 114
                D+W+ G                     + L + L+G      +P          F
Sbjct: 187 T-TAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF 245

Query: 115 EDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              + P N  K              +  +S+    LL+ + + +P +R T +E     +F
Sbjct: 246 TLPKQPYNNLK------------HKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 58.1 bits (140), Expect = 7e-10
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           +   +RDLK EN LLD      ++I D G +         +  VGT  Y+APEVL+ + Y
Sbjct: 121 ENTVYRDLKPENILLDDYG--HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRY 178

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
                D W  G  +Y M+ G  PF  +++     +   R++  +         S++ +++
Sbjct: 179 -TLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYS--AKFSEEAKSI 235

Query: 151 LSRIFVANPSRRITIK-----EIKSHPWFLKNL 178
              +   +P +R+  +     E+K HP F +N+
Sbjct: 236 CKMLLTKDPKQRLGCQEEGAGEVKRHP-FFRNM 267

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 58.1 bits (140), Expect = 7e-10
 Identities = 56/168 (33%), Positives = 80/168 (47%), Gaps = 19/168 (11%)

Query: 32  QICHRDLKLENTL--LDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVL--- 85
           +I HRDLK  N L  LDG     +K+ DFG S K++    R  S +GTP ++APEV+   
Sbjct: 123 KIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 178

Query: 86  --SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
               R YD K ADVWS G+TL + +    P   + +P      I++        P     
Sbjct: 179 TSKDRPYDYK-ADVWSLGITL-IEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPS--RW 234

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFL--KNLP-RELTETAQA 188
           S + ++ L +    N   R T  ++  HP+     N P REL   A+A
Sbjct: 235 SSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKPIRELIAEAKA 282

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 57.7 bits (139), Expect = 7e-10
 Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 17/148 (11%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRRE 89
           + I HRDLK +N  L  +    +K+ D G ++         ST +GTP Y++PE+ S + 
Sbjct: 121 KHILHRDLKTQNVFLTRTNI--IKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKP 178

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP----DYVHISQ 145
           Y+ K +DVW+ G  +Y M    + F    + K+    + RI  ++ K+P    DY   S 
Sbjct: 179 YNYK-SDVWALGCCVYEMATLKHAF----NAKDMNSLVYRI--IEGKLPPMPKDY---SP 228

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
           +   L++ +    P +R ++K I   P+
Sbjct: 229 ELGELIATMLSKRPEKRPSVKSILRQPY 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 8e-10
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 36/176 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----VGTPAYIAPEVL 85
           S  I HRD+K EN L+  S +  LK+CDFG++++  L +RP S     V T  Y APE+L
Sbjct: 118 SHNIIHRDIKPENILV--SESGVLKLCDFGFARA--LRARPASPLTDYVATRWYRAPELL 173

Query: 86  -SRREYDGKLADVWSCGVTLYVMLVGA--YPFEDQEDP-----KNFRKTISRIMAVQY-- 135
                Y GK  DVW+ G  +  +L G   +P +   D      K           +    
Sbjct: 174 VGDTNY-GKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232

Query: 136 ------KIPDYVH---ISQDCRNLLSRI---FVAN-----PSRRITIKEIKSHPWF 174
                   P+      + +     +S     F+       P  R+T  E+  HP+F
Sbjct: 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 57.3 bits (138), Expect = 9e-10
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSLLHSRPKSTVGTPAYIAPEV 84
           S+++ HRD+K  N  +  +    +K+ D G      SK++  HS     VGTP Y++PE 
Sbjct: 124 SRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPER 177

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           +    Y+ K +D+WS G  LY M     PF    D  N      +I    Y      H S
Sbjct: 178 IHENGYNFK-SDIWSLGCLLYEMAALQSPF--YGDKMNLFSLCQKIEQCDYPPLPTEHYS 234

Query: 145 QDCRNLLSRIFVANPSRRITI 165
           +  R L+S     +P +R  I
Sbjct: 235 EKLRELVSMCIYPDPDQRPDI 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 57.3 bits (138), Expect = 1e-09
 Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 20/171 (11%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEV-- 84
           S +I HRDLK  N LL  DG     +K+ DFG S K+     R  S +GTP ++APEV  
Sbjct: 128 SMKIIHRDLKAGNVLLTLDGD----IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVM 183

Query: 85  ---LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
              +    YD K AD+WS G+TL + +    P   + +P      I++        P   
Sbjct: 184 CETMKDTPYDYK-ADIWSLGITL-IEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPS-- 239

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK---NLP-RELTETAQA 188
             S + R+ L      +P  R +  ++  HP+      N P REL   A+A
Sbjct: 240 KWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRPLRELVAEAKA 290

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 57.7 bits (139), Expect = 1e-09
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 123 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 179

Query: 91  DGKLADVWSCGVTLYVMLVGAYP 113
             + +D+WS G++L  M +G YP
Sbjct: 180 SVQ-SDIWSMGLSLVEMAIGRYP 201

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 31/170 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV-LSRR 88
           S  + HRDLK  N L++ +    LKICDFG ++  +   +    V T  Y APE+ L+ +
Sbjct: 126 SAGVVHRDLKPSNILINENC--DLKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQ 181

Query: 89  EYDGKLADVWSCGVTLYVMLVGA--YPFEDQED------------PKNFRKTISRIMAVQ 134
           +YD ++ D+WS G     ML G   +P +D  +            P +   TI     ++
Sbjct: 182 KYDVEV-DIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLR 240

Query: 135 Y--------KIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
           +         +P    + +      +LL ++ V +P +RI+  E  +HP+
Sbjct: 241 FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 56.8 bits (138), Expect = 2e-09
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 35/172 (20%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVL-SRRE 89
           I HRDLK  N LL  +    LKICDFG ++   S L    +  V T  Y APE+L   +E
Sbjct: 127 ILHRDLKTSNLLL--NNRGILKICDFGLAREYGSPLKPYTQLVV-TLWYRAPELLLGAKE 183

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFR-------------KTISRIM 131
           Y   + D+WS G     +L     F      DQ + K F+               +    
Sbjct: 184 YSTAI-DMWSVGCIFAELLTKKPLFPGKSEIDQLN-KIFKLLGTPTEKIWPGFSELPGAK 241

Query: 132 AVQYKIPDY---------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              +    Y         + +S +  +LL+R+   +P++RI+ ++   HP+F
Sbjct: 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 17/155 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLS-R 87
           + +I HRD+K  N LL       +K+ DFG S   +    R  ++VGTP ++APEV++  
Sbjct: 146 NNRIIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 203

Query: 88  REYDGKL---ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           ++YD       DVWS G+T   +  G  P  D    K   K I R        P  +H  
Sbjct: 204 QQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK-IPRNPP-----PTLLHPE 257

Query: 145 QDCR---NLLSRIFVANPSRRITIKEIKSHPWFLK 176
           + CR   + +S+  + +   R ++  +  HP F+K
Sbjct: 258 KWCRSFNHFISQCLIKDFEARPSVTHLLEHP-FIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 56.3 bits (135), Expect = 2e-09
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRD+K +N LL  +    +K+ DFG S        R  + +GTP ++APEV++  E
Sbjct: 130 HKVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 187

Query: 90  -----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
                YD K +D+WS G+T   M  GA P  D   P      I R  A + K   +   S
Sbjct: 188 NPDATYDFK-SDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKW---S 242

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPW 173
           +  ++ +    V N S+R T +++  HP+
Sbjct: 243 KKFQSFIESCLVKNHSQRPTTEQLMKHPF 271

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 31/173 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVL-S 86
           S  I HRD+K  N L++      LK+ DFG ++     +    T  V T  Y  PE+L  
Sbjct: 118 SNGILHRDIKGSNILINND--GVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG 175

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFE---DQE------------DPKNFRKTISRIM 131
              Y  ++ D+WS G  L  + +G   F+   + E              +N+        
Sbjct: 176 ATRYGPEV-DMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234

Query: 132 AVQYKIP--------DYVH--ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
               K          ++    I     +LL ++   +P +RI+  +   H +F
Sbjct: 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 56.2 bits (135), Expect = 3e-09
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 14/138 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSLLHSRPKSTVGTPAYIAPEV 84
           S+++ HRD+K  N  +  +    +K+ D G      SK++  HS     VGTP Y++PE 
Sbjct: 124 SRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPER 177

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           +    Y+ K +D+WS G  LY M     PF    D  N      +I    Y      H S
Sbjct: 178 IHENGYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYS 234

Query: 145 QDCRNLLSRIFVANPSRR 162
           ++ R L++     +P +R
Sbjct: 235 EELRQLVNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 56.6 bits (136), Expect = 3e-09
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 36/174 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR---LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV-L 85
           S+ ICHRDLK +N L+D    P    LK+CDFG +K+ L   R  S + +  Y APE+ L
Sbjct: 188 SKFICHRDLKPQNLLID----PNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELML 243

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS----------RIMAVQY 135
               Y   + D+WS G  +  M++G   F  Q       + I           + M   Y
Sbjct: 244 GATNYTTHI-DLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNY 302

Query: 136 ---KIPDYVHISQDCR------------NLLSRIFVANPSRRITIKEIKSHPWF 174
              K PD     +D +            N +S+     P +R+   E  + P+F
Sbjct: 303 ADIKFPDVK--PKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354

Length = 440

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 34/173 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVL-SR 87
           S ++ HRDLK +N L+D   A  LK+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 117 SHRVLHRDLKPQNLLIDREGA--LKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS 174

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKNFRKTISRIMA---------VQYKI 137
           R+Y   + D+WS G     M+     F  D E  + FR  I R +          V   +
Sbjct: 175 RQYSTPV-DIWSIGCIFAEMVNRRPLFPGDSEIDQLFR--IFRTLGTPDEDVWPGVTS-L 230

Query: 138 PDYV----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           PDY                 ++ +D  +LLS++ V +P++RI+ K    HP+F
Sbjct: 231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 55.2 bits (134), Expect = 5e-09
 Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 16/148 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S+   HRDL   N L+  +    +KI DFG S+   ++            +     APE 
Sbjct: 120 SKNFVHRDLAARNCLVTENL--VVKISDFGLSR--DIYEDDYYRKRGGGKLPIKWMAPES 175

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L   ++  K +DVWS GV L+ +  +G  P+    + +             Y++P   + 
Sbjct: 176 LKDGKFTSK-SDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDG-----YRLPRPENC 229

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSH 171
             +   L+ + +  +P  R T  E+   
Sbjct: 230 PDELYELMLQCWAYDPEDRPTFSELVED 257

Length = 258

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 55.1 bits (132), Expect = 6e-09
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 25/157 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K    VGTP ++APEV+ +
Sbjct: 119 SEKKIHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQ 175

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQED-------PKNFRKTISRIMAVQYKIPDY 140
             YD K AD+WS G+T   +  G  P  +          PKN   T+             
Sbjct: 176 SAYDSK-ADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEG----------- 223

Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            + S+  +  +       PS R T KE+  H + ++ 
Sbjct: 224 -NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 55.2 bits (133), Expect = 6e-09
 Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 36/169 (21%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKST-VGTPAYIAPEVLSRRE 89
           HRD+K  N LL+     ++K+ DFG    Y+      SRP +  V T  Y  PE+L   E
Sbjct: 139 HRDIKCSNILLNNKG--QIKLADFGLARLYNSEE---SRPYTNKVITLWYRPPELLLGEE 193

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI------------------- 130
             G   DVWSCG  L  +      F+  ++     + ISR+                   
Sbjct: 194 RYGPAIDVWSCGCILGELFTKKPIFQANQELAQL-ELISRLCGSPCPAVWPDVIKLPYFN 252

Query: 131 ---MAVQYK---IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                 QY+     ++  I     +LL  +   +PS+R T +E  + PW
Sbjct: 253 TMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 55.5 bits (133), Expect = 8e-09
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 21/117 (17%)

Query: 31  QQICHRDLKLENTLLDG---------------SPAPRLKICDFGYSKSSLLHSRPKSTVG 75
           +++ HRDLK +N  L                 +  P  KI DFG SK+  + S   S VG
Sbjct: 144 ERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVG 203

Query: 76  TPAYIAPEVL--SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI 130
           TP Y +PE+L    + YD K +D+W+ G  +Y +  G  PF       NF + IS +
Sbjct: 204 TPYYWSPELLLHETKSYDDK-SDMWALGCIIYELCSGKTPFHKA---NNFSQLISEL 256

Length = 1021

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 54.7 bits (132), Expect = 9e-09
 Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 44/180 (24%)

Query: 30  SQQICHRDLKLENTL--LDGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYI 80
           S  + HRDLK  N L   D      LKICDFG ++       P          V T  Y 
Sbjct: 123 SANVLHRDLKPGNLLVNADC----ELKICDFGLARG--FSENPGENAGFMTEYVATRWYR 176

Query: 81  APEV-LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED---------------PKNFR 124
           APE+ LS + Y  K  DVWS G  L   L+G  P    +D                +   
Sbjct: 177 APEIMLSFQSYT-KAIDVWSVGCIL-AELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234

Query: 125 KTISRIMAVQY--KIPDYVHI---------SQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
             I    A  Y   +P+             +    +LL ++   +P++RI+++E   HP+
Sbjct: 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 30/171 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 118 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 175

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKNFRKTISRIMAVQ--------YKIPD 139
           +Y     D+WS G     M+     F  D E  + FR  I R +             +PD
Sbjct: 176 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR--IFRTLGTPDEVVWPGVTSLPD 233

Query: 140 YV----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           Y                  + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 9/77 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV---LS 86
           S +  HRD+K  N LL  +    +K+ DFG   S+ L S   S VGTP ++APEV   + 
Sbjct: 133 SHERIHRDIKAGNILL--TEPGTVKLADFG---SASLVSPANSFVGTPYWMAPEVILAMD 187

Query: 87  RREYDGKLADVWSCGVT 103
             +YDGK  DVWS G+T
Sbjct: 188 EGQYDGK-VDVWSLGIT 203

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 22/112 (19%)

Query: 22  PDIFFSSLSQQI------------CHRDLKLENTLLDGSPAPRLKICDFGYSKS------ 63
           P+  F   ++QI             HRD+K  N +L   P   +K+ DFG ++       
Sbjct: 100 PEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML--MPNGIIKLIDFGCARRLAWVGL 157

Query: 64  SLLHSRP-KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
              HS   KS  GTP ++APEV++   Y G+ +D+WS G T++ M  G  P 
Sbjct: 158 HGTHSNMLKSMHGTPYWMAPEVINESGY-GRKSDIWSIGCTVFEMATGKPPL 208

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 47/179 (26%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE+ L+
Sbjct: 136 SAGIIHRDLKPSNIAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 189

Query: 87  RREYDGKLADVWSCGVTLYVMLVGA--YPFEDQEDPKNFRKTISRIMAV----------- 133
              Y+ +  D+WS G  +  +L G   +P  D  D       + RIM +           
Sbjct: 190 WMHYN-QTVDIWSVGCIMAELLTGKTLFPGSDHID------QLKRIMNLVGTPDEELLQK 242

Query: 134 --------------QYKIPDYVHI----SQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                         Q    D+  +    +    +LL ++ V +P +RIT  E  +HP+ 
Sbjct: 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S++  HRD+K  N LL  S    +K+ DFG +         ++T VGTP ++APEV+ + 
Sbjct: 119 SERKIHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 176

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQED-------PKNFRKTISRIMAVQYKIPDYV 141
            YD K AD+WS G+T   +  G  P  D          PKN   T+      QY  P + 
Sbjct: 177 AYDFK-ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEG----QYSKP-FK 230

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
              + C N        +P  R T KE+  H +  +
Sbjct: 231 EFVEACLN-------KDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 36/174 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVL--S 86
           S+++ HRDLK +N L+D      +K+ DFG +++  +  R  +  V T  Y APEVL  S
Sbjct: 119 SRRVLHRDLKPQNLLIDNKGV--IKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGS 176

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPF--EDQEDPKNFRKTISRIMAVQ--------YK 136
            R Y   + D+WS G T++  +    P    D E  + FR  I RI+             
Sbjct: 177 PR-YSTPV-DIWSIG-TIFAEMATKKPLFHGDSEIDQLFR--IFRILGTPTEDVWPGVTS 231

Query: 137 IPDY----------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           +PDY                 ++ +D  +LL ++ + +P++RI+ K+  +HP+F
Sbjct: 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
           + ++ HRD+K +N LL  +    +K+ DFG S        R  + +GTP ++APEV++  
Sbjct: 139 AHKVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 196

Query: 89  E-----YDGKLADVWSCGVTLYVMLVGAYPFED 116
           E     YD + +D+WS G+T   M  GA P  D
Sbjct: 197 ENPDATYDYR-SDIWSLGITAIEMAEGAPPLCD 228

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 52.6 bits (126), Expect = 4e-08
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 9/156 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I +RD+K EN LLD     RL   D G +             GT  Y+APE+L    
Sbjct: 113 SMDIVYRDMKPENVLLDDQGNCRLS--DLGLAVELKDGKTITQRAGTNGYMAPEILKEEP 170

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y   + D ++ G ++Y M+ G  PF+D ++     +   R +  + K  ++ + +++ ++
Sbjct: 171 YSYPV-DWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKD 228

Query: 150 LLSRIFVANPSRRITIKEIKSHP---WFLK--NLPR 180
           +        P  R+  +E    P    F K  N PR
Sbjct: 229 ICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 53.1 bits (127), Expect = 4e-08
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 39/180 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++  +      V T  Y APEV+    
Sbjct: 141 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG 198

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI------------------- 130
           Y   + D+WS G  +  ++ G+  F+  +    + K I ++                   
Sbjct: 199 YKENV-DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYV 257

Query: 131 --------MAVQYKIPDYVHISQD---------CRNLLSRIFVANPSRRITIKEIKSHPW 173
                   ++ +   PD++  S+           R+LLS++ V +P +RI++ E   HP+
Sbjct: 258 ENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 29/171 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
           S  + HRDLK +N L++ +    LK+ DFG +++  +  R  S  V T  Y  P+VL   
Sbjct: 117 SHNVLHRDLKPQNLLINKNG--ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 174

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------YKIPD 139
           + Y   + D+WS G     +     P     D  +  K I R++            K+PD
Sbjct: 175 KLYSTSI-DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233

Query: 140 YV----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           Y                  ++   R+LL  + V NP +RI+ +E   HP+F
Sbjct: 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA-----YIAPEV 84
           SQ+  HRDL   N L++      +KI DFG +K  L   +    V  P      + APE 
Sbjct: 127 SQRYIHRDLAARNILVESED--LVKISDFGLAKV-LPEDKDYYYVKEPGESPIFWYAPEC 183

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI 127
           L   ++    +DVWS GVTLY +    Y    Q  P  F + I
Sbjct: 184 LRTSKFSSA-SDVWSFGVTLYELF--TYGDPSQSPPAEFLRMI 223

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 51.9 bits (124), Expect = 7e-08
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 9/77 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV---LS 86
           S  + HRD+K  N LL  +   ++K+ DFG   S+   S   S VGTP ++APEV   + 
Sbjct: 139 SHNMIHRDIKAGNILL--TEPGQVKLADFG---SASKSSPANSFVGTPYWMAPEVILAMD 193

Query: 87  RREYDGKLADVWSCGVT 103
             +YDGK+ DVWS G+T
Sbjct: 194 EGQYDGKV-DVWSLGIT 209

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 51.6 bits (123), Expect = 9e-08
 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 9/77 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV---LS 86
           S  + HRD+K  N LL  +   ++K+ DFG   S+ + S   S VGTP ++APEV   + 
Sbjct: 143 SHNMIHRDIKAGNILL--TEPGQVKLADFG---SASIASPANSFVGTPYWMAPEVILAMD 197

Query: 87  RREYDGKLADVWSCGVT 103
             +YDGK+ DVWS G+T
Sbjct: 198 EGQYDGKV-DVWSLGIT 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 42/194 (21%), Positives = 67/194 (34%), Gaps = 52/194 (26%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKS------TVGTPAYIA 81
           S  + HRDLK  N L+  +G     +KI D G ++  L ++  K        V T  Y A
Sbjct: 126 SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR--LFNAPLKPLADLDPVVVTIWYRA 183

Query: 82  PEV-LSRREYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPK------------------ 121
           PE+ L  R Y  K  D+W+ G     +L     F+  +   K                  
Sbjct: 184 PELLLGARHYT-KAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLG 242

Query: 122 -----------------NFRKTISRIMAVQYKIPDYVHI----SQDCRNLLSRIFVANPS 160
                               K           +  ++           +LL ++   +P+
Sbjct: 243 TPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPT 302

Query: 161 RRITIKEIKSHPWF 174
           +RIT +E   HP+F
Sbjct: 303 KRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 74  VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +GTP Y+APE+L  + + G   D W+ GV L+  L G  PF D+   + F+  ++R    
Sbjct: 541 LGTPDYLAPELLLGKPH-GPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNR---- 595

Query: 134 QYKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              IP       +S + +N +  +   +P++R  +KE+K HP F
Sbjct: 596 --DIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLF 637

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 31/172 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L+D      LK+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS 178

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF--EDQEDPKNFRKTISRIMAVQYK--------IP 138
            +     D+WS G  ++  +V   P    D E  + F+  I RI+    +        +P
Sbjct: 179 RHYSTPVDIWSVGC-IFAEMVNQKPLFPGDSEIDELFK--IFRILGTPNEETWPGVTSLP 235

Query: 139 DYVH----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           DY                  +     +LLS++   +PS+RIT +    H +F
Sbjct: 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEV--LSRREYD 91
           HRD+K  N LL  +    +K+ DFG S   +   ++ KS +GTP ++APEV  + R+   
Sbjct: 129 HRDIKGANILL--TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGY 186

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKN-FRKTISRIMAVQYKIPDYVHISQDCRNL 150
            +L D+W+ G+T   +     P  D    +  F  T S       K+ D +  S    + 
Sbjct: 187 NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP--KLKDKMKWSNSFHHF 244

Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           +      NP +R T +++  HP+
Sbjct: 245 VKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 59/230 (25%), Positives = 90/230 (39%), Gaps = 64/230 (27%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S  I HRDLK  N ++  D +    LKI DFG ++++         V T  Y APEV+  
Sbjct: 136 SAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 191

Query: 88  REYDGKLADVWSCGVTLYVMLVGA--YPFEDQEDPKNFRKTISR--------IMAVQYKI 137
             Y   + D+WS G  +  M+ G   +P  D  D  N  K I +        +  +Q  +
Sbjct: 192 MGYKENV-DIWSVGCIMGEMIRGTVLFPGTDHIDQWN--KIIEQLGTPSDEFMSRLQPTV 248

Query: 138 PDYVH-----------------------------ISQDCRNLLSRIFVANPSRRITIKEI 168
            +YV                               +   R+LLS++ V +P +RI++ + 
Sbjct: 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA 308

Query: 169 KSHP----WFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAK 214
             HP    W+    P E+     A Y           S++E    VEE K
Sbjct: 309 LQHPYINVWY---DPSEVEAPPPAPYD---------HSIDEREHTVEEWK 346

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRD+K EN L+  S +  +K+CDFG+++ +L       T  V T  Y APE+L  
Sbjct: 118 SHNIIHRDIKPENILV--SQSGVVKLCDFGFAR-TLAAPGEVYTDYVATRWYRAPELLVG 174

Query: 88  REYDGKLADVWSCGVTLYVMLVG 110
               G+  D+W+ G  +  ML G
Sbjct: 175 DTKYGRAVDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 9/77 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV---LS 86
           S  + HRD+K  N LL  S    +K+ DFG   S+ + +     VGTP ++APEV   + 
Sbjct: 133 SHNMIHRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMD 187

Query: 87  RREYDGKLADVWSCGVT 103
             +YDGK+ DVWS G+T
Sbjct: 188 EGQYDGKV-DVWSLGIT 203

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 16/146 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPEVL 85
            Q   HRDL   N L+        K+ DFG ++       L S  K       + APE  
Sbjct: 122 EQNSIHRDLAARNILVGEDLV--CKVADFGLARLIKEDVYLSSDKKIPY---KWTAPEAA 176

Query: 86  SRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           S   +  K +DVWS G+ LY +   G  P+       N  +   +I A  Y++P      
Sbjct: 177 SHGTFSTK-SDVWSFGILLYEMFTYGQVPYPG----MNNHEVYDQITA-GYRMPCPAKCP 230

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKS 170
           Q+   ++   + A P  R + K ++ 
Sbjct: 231 QEIYKIMLECWAAEPEDRPSFKALRE 256

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 49.6 bits (118), Expect = 4e-07
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 6/140 (4%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSRREYDG- 92
           HRD+K  N LL  +    +K+ DFG + K +   ++ KS +GTP ++APEV +  +  G 
Sbjct: 129 HRDIKGANILL--TDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGY 186

Query: 93  -KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
            +L D+W+ G+T   +     P  D   P      +S+      K+ D    S    N +
Sbjct: 187 NQLCDIWAVGITAIELAELQPPMFDLH-PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV 245

Query: 152 SRIFVANPSRRITIKEIKSH 171
                 NP +R T + + +H
Sbjct: 246 KISLTKNPKKRPTAERLLTH 265

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 49.5 bits (118), Expect = 4e-07
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 17/153 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAY-IAPEVL 85
           S+Q  HRDL   N L++     ++KI DFG +K+      +   K  + +P +  APE L
Sbjct: 127 SRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL 184

Query: 86  SRREYDGKLADVWSCGVTLYVMLV----GAYP---FEDQEDPKNFRKTISRIMAV---QY 135
            + ++    +DVWS GVTLY +L      + P   F     P + + T++R++ V     
Sbjct: 185 IQSKF-YIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243

Query: 136 KIPDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
           ++P   +  ++   L+ + +   PS+R T + +
Sbjct: 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 34/174 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----VGTPAYIAPEVL 85
                HRD+K EN L+  +   ++K+CDFG+++   + + P       V T  Y APE+L
Sbjct: 118 KHNCIHRDVKPENILI--TKQGQIKLCDFGFAR---ILTGPGDDYTDYVATRWYRAPELL 172

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGA--YPFEDQEDP-----KNFRKTISRIMAV----Q 134
                 G   DVW+ G     +L G   +P +   D      K     I R   +    Q
Sbjct: 173 VGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232

Query: 135 Y----KIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           +     IP+          + +IS    + L      +P+ R++ +E+  HP+F
Sbjct: 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 49.2 bits (117), Expect = 7e-07
 Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 31/168 (18%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK  N  L  +    LKI DFG ++ +   S     V T  Y APEV+    +  
Sbjct: 139 IIHRDLKPGN--LAVNEDCELKILDFGLARQT--DSEMTGYVVTRWYRAPEVILNWMHYT 194

Query: 93  KLADVWSCGVTLYVMLVGAYPFE-----DQ---------------------EDPKNFRKT 126
           +  D+WS G  +  ML G   F+     DQ                     ED KN+ K 
Sbjct: 195 QTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKK 254

Query: 127 ISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           + R     ++     + +    N+L ++ V +   RIT  E  +HP+F
Sbjct: 255 LPRFRKKDFRSL-LPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 30/168 (17%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           + HRDLK +N L+D      LKI D G  ++ S+        + T  Y APEVL    + 
Sbjct: 131 VMHRDLKPQNLLVDKQKG-LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHY 189

Query: 92  GKLADVWSCGVTLYVMLVGAYPF----EDQEDPKNFR-------KTISRIMAVQ------ 134
               D+WS G     M      F    E Q+    F+       +    +  ++      
Sbjct: 190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFP 249

Query: 135 --------YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                     +PD   +S +  +LL ++   +P++RI+ K   +HP+F
Sbjct: 250 QWKPQDLSRAVPD---LSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 47/182 (25%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----------------YSKSSLLHSR---P 70
           S+ + HRDLK +N LL       + I D+G                  + ++ +S    P
Sbjct: 131 SKGVLHRDLKPDNILL--GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIP 188

Query: 71  KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI 130
              VGTP Y+APE L          D+++ GV LY ML  ++P+      K  RK     
Sbjct: 189 GKIVGTPDYMAPERLLGVPASES-TDIYALGVILYQMLTLSFPYRR----KKGRK----- 238

Query: 131 MAVQYKIPDYVHIS--QDCRNLLSRI----FVANPSRRIT-----IKEIKSH-----PWF 174
           ++ +  I   + ++  ++    LS+I       +P+ R +      ++++ H      W 
Sbjct: 239 ISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWT 298

Query: 175 LK 176
           +K
Sbjct: 299 VK 300

Length = 932

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL---HSRPKSTVGTP-AYIAPEVL 85
           S++  HRDL   N LL  +   ++KI DFG  ++      H   +  +  P A+ APE L
Sbjct: 115 SKRFIHRDLAARNILL--ASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL 172

Query: 86  SRREYDGKLADVWSCGVTLYVM 107
             R +    +DVW  GVTL+ M
Sbjct: 173 RTRTFS-HASDVWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA-----YIAPEVLSR 87
           + HRDL   N L+  +P   +KI DFG +K  LL    K            ++A E +  
Sbjct: 130 LVHRDLAARNVLVK-TPQ-HVKITDFGLAK--LLDVDEKEYHAEGGKVPIKWMALESILH 185

Query: 88  REYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           R Y  K +DVWS GVT++ +M  GA P+E 
Sbjct: 186 RIYTHK-SDVWSYGVTVWELMTFGAKPYEG 214

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 32/173 (18%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SRR 88
           Q I HRDLK +N L+  S    LK+ DFG +++  + S+  S+ V T  Y  P+VL    
Sbjct: 122 QHILHRDLKPQNLLI--SYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGAT 179

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--------KIPDY 140
           +Y   L D+W  G     ML G   F    D     + I  ++ V          K+P+Y
Sbjct: 180 DYSSAL-DIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNY 238

Query: 141 ------------VHISQD-------CRNLLSRIFVANPSRRITIKEIKSHPWF 174
                       + +            +L S++ +  P  RI+ ++   HP+F
Sbjct: 239 KPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 23/152 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP----KSTVGTP-AYIAPEV 84
           S++  HRDL   N LL  S    +KICDFG ++   ++  P    K     P  ++APE 
Sbjct: 191 SRKCIHRDLAARNILL--SENNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPES 246

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFE----DQEDPKNFRKTISRIMAVQYKIPD 139
           +  + Y  + +DVWS GV L+ +  +GA P+     D+E  +  ++  +R+ A +Y  P+
Sbjct: 247 IFDKVYTTQ-SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG-TRMRAPEYATPE 304

Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSH 171
              I  DC       +  NP  R T  E+   
Sbjct: 305 IYSIMLDC-------WHNNPEDRPTFSELVEI 329

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 32/174 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
            +++ HRDLK +N L+  S    LK+ DFG +++  + S+  S  V T  Y  P+VL   
Sbjct: 121 QRRVLHRDLKPQNLLI--SERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS 178

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------------- 132
            EY   L D+W  G   Y M  G   F    D ++    I R++                
Sbjct: 179 TEYSTSL-DMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237

Query: 133 -VQYKIPDY------VHISQ-----DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              Y  P Y       H  +         L  +     P +RI+  E   HP+F
Sbjct: 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 42/182 (23%), Positives = 65/182 (35%), Gaps = 47/182 (25%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG--------YSKSSLLHSRPKSTVGTPAYIA 81
           S  + HRDLK  N  ++ +    LKI DFG        YS    L       + T  Y +
Sbjct: 132 SANVLHRDLKPANVFIN-TEDLVLKIGDFGLARIVDPHYSHKGYL----SEGLVTKWYRS 186

Query: 82  PE-VLSRREYDGKLADVWSCGVTLYVMLVG------------------AYPFEDQEDPKN 122
           P  +LS   Y  K  D+W+ G     ML G                  + P   +ED   
Sbjct: 187 PRLLLSPNNYT-KAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREED--- 242

Query: 123 FRKTISRIMAVQYKIPD-YVH---------ISQDCRNLLSRIFVANPSRRITIKEIKSHP 172
            R  +  ++    +                ++ +  + L +I   NP  R+T +E   HP
Sbjct: 243 -RNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301

Query: 173 WF 174
           + 
Sbjct: 302 YM 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 45.7 bits (108), Expect = 8e-06
 Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 11/103 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAY-IAPEVL 85
           SQ   HRDL   N LLD      +KI DFG +K+      + R +    +P +  A E L
Sbjct: 125 SQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL 182

Query: 86  SRREYDGKLA-DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI 127
             +E     A DVWS GVTLY +L        Q  PK F + I
Sbjct: 183 --KENKFSYASDVWSFGVTLYELLTHCDSK--QSPPKKFEEMI 221

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 45.8 bits (108), Expect = 8e-06
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 35/174 (20%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SRR 88
           +++ HRDLK +N L++      LK+ DFG +++  + ++  S  V T  Y  P++L    
Sbjct: 123 RKVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST 180

Query: 89  EYDGKLADVWSCGVTLYVMLVGA--YPFEDQEDPKNFRKTISRIMA-------------- 132
           +Y  ++ D+W  G   Y M  G   +P    E+  +F   I RI+               
Sbjct: 181 DYSTQI-DMWGVGCIFYEMSTGRPLFPGSTVEEQLHF---IFRILGTPTEETWPGILSNE 236

Query: 133 --VQYKIPDY---------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
               Y  P Y           +  D   LLS++      +RI+ +E   HP+F 
Sbjct: 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSRRE--- 89
           HRD+K  N LL  +    +K+ DFG S   +S    R  ++VGTP ++APEV++  +   
Sbjct: 147 HRDVKGNNILL--TTEGGVKLVDFGVSAQLTSTRLRR-NTSVGTPFWMAPEVIACEQQLD 203

Query: 90  --YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             YD +  DVWS G+T   +  G  P  D    +   K I R        P+    S + 
Sbjct: 204 STYDAR-CDVWSLGITAIELGDGDPPLADLHPMRALFK-IPRNPPPTLHQPEL--WSNEF 259

Query: 148 RNLLSRIFVANPSRRITIKEIKSH 171
            + + +    +  +R T+ ++  H
Sbjct: 260 NDFIRKCLTKDYEKRPTVSDLLQH 283

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
            +++ HRD+KLEN  L+      L   DFG +              VGT A  +PE+L+ 
Sbjct: 285 DKKLIHRDIKLENIFLNCDGKIVLG--DFGTAMPFEKEREAFDYGWVGTVATNSPEILAG 342

Query: 88  REYDGKLADVWSCGVTLYVMLVGAY-PFED--QEDPKNFRKTISRIMAVQYKIPD 139
             Y  ++ D+WSCG+ L  ML   + P  D   +  K   K I  +     + PD
Sbjct: 343 DGY-CEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPD 396

Length = 501

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 16/128 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP----KSTVGTP-AYIAPEV 84
           S++  HRDL   N LL  S    +KICDFG ++   ++  P    K +   P  ++APE 
Sbjct: 192 SRKCIHRDLAARNILL--SENNVVKICDFGLARD--IYKDPDYVRKGSARLPLKWMAPES 247

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFE----DQEDPKNFRKTISRIMAVQYKIPD 139
           +  + Y  + +DVWS GV L+ +  +GA P+     ++E  +  +   +R+ A +   P+
Sbjct: 248 IFDKVYTTQ-SDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG-TRMRAPENATPE 305

Query: 140 YVHISQDC 147
              I   C
Sbjct: 306 IYRIMLAC 313

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 31/171 (18%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSRRE 89
            I HRD+K EN L+  S    LK+CDFG++++    S    T  V T  Y +PE+L    
Sbjct: 120 DIVHRDIKPENLLI--SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP 177

Query: 90  YDGKLADVWSCGVTLYVMLVGA--YPFEDQEDPK-NFRKTISRIMAVQYKI--------- 137
           Y GK  D+WS G  L  +  G   +P E + D     +K +  + A Q K+         
Sbjct: 178 Y-GKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236

Query: 138 ---PDYVH-----------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              P   H           +S    +L+  +   NP+ R   ++  +HP F
Sbjct: 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTP---AYIAPEVLS 86
           S+Q  HRDL   N L+D      +K+ DFG S+  +L     S+VG+     +  PEVL 
Sbjct: 118 SKQFIHRDLAARNCLVDDQGC--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLL 174

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFE 115
             ++  K +DVW+ GV ++ V  +G  P+E
Sbjct: 175 YSKFSSK-SDVWAFGVLMWEVYSLGKMPYE 203

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--PKSTVGTPA-YIAPEVLS 86
           S+   HRDL   N LL  +    +KICDFG ++  +  S    K     P  ++APE + 
Sbjct: 159 SKNCIHRDLAARNVLL--THGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 216

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
              Y    +DVWS G+ L+ +  +G+ P+        F K I       Y++    H   
Sbjct: 217 NCVYT-FESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE----GYRMAQPEHAPA 271

Query: 146 DCRNLLSRIFVANPSRRITIKEIKS 170
           +  +++   + A+P +R T K+I  
Sbjct: 272 EIYDIMKTCWDADPLKRPTFKQIVQ 296

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 33/172 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 138 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 191

Query: 88  REYDGKLADVWSCGVTLYVMLVGA--YPFEDQED------------PKNFRKTISRIMAV 133
             +  +  D+WS G  +  +L G   +P  D  D                 K IS   A 
Sbjct: 192 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 251

Query: 134 QY-----KIPD------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            Y     ++P       ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 39/183 (21%), Positives = 60/183 (32%), Gaps = 42/183 (22%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY------SKSSLLHSRPKST------VGTP 77
              I HRD+K  N L+D      LKI DFG          +        T      V T 
Sbjct: 133 ENHILHRDIKAANILIDNQGI--LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTR 190

Query: 78  AYIAPE-VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--- 133
            Y  PE +L  R Y     D+W  G     M       + + D       I ++      
Sbjct: 191 WYRPPELLLGERRY-TTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL-IFKLCGTPTE 248

Query: 134 --------------QYKIPDYV--------HISQDCRNLLSRIFVANPSRRITIKEIKSH 171
                          +   +Y          +  +  +LLS++   +P +R+T  +   H
Sbjct: 249 ETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308

Query: 172 PWF 174
           P+F
Sbjct: 309 PYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 20/147 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVG-TPA-YIAPEV 84
           S++  HRDL   N L+  +    +KI DFG ++   +H      K+T G  P  ++APE 
Sbjct: 150 SKKCIHRDLAARNVLV--TEDHVMKIADFGLARD--IHHIDYYRKTTNGRLPVKWMAPEA 205

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFR--KTISRIMAVQYKIPDYV 141
           L  R Y  + +DVWS GV L+ +  +G  P+      + F+  K   R+   Q    +  
Sbjct: 206 LFDRVYTHQ-SDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELY 264

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEI 168
           H+ +DC       +   PS+R T K++
Sbjct: 265 HLMRDC-------WHEVPSQRPTFKQL 284

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 39/180 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI--------MAVQYKIPDYV 141
           Y   + D+WS G  +  M+ G   F   +    + K I ++          +Q  +  YV
Sbjct: 202 YKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260

Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 53/186 (28%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKST-----VGTPAYIAP 82
             +I HRD+K  N L+  DG     LK+ DFG +++  L    K       V T  Y  P
Sbjct: 137 RNKILHRDMKAANILITKDGI----LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPP 192

Query: 83  EV-LSRREYDGKLADVWSCG---------------------VTLYVMLVGA-----YP-- 113
           E+ L  R+Y G   D+W  G                     +TL   L G+     +P  
Sbjct: 193 ELLLGERDY-GPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGV 251

Query: 114 -----FEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
                F+  E P+  ++       V+ ++  YV       +L+ ++ V +P++RI     
Sbjct: 252 DKLELFKKMELPQGQKR------KVKERLKPYVK-DPHALDLIDKLLVLDPAKRIDADTA 304

Query: 169 KSHPWF 174
            +H +F
Sbjct: 305 LNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 27/150 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRPKSTVGTPAYIAPEVLSRR 88
            +   HRDL   N L+        K+ DFG +K +S      K  V    + APE L  +
Sbjct: 120 EKNFVHRDLAARNVLVSEDLVA--KVSDFGLAKEASQGQDSGKLPV---KWTAPEALREK 174

Query: 89  EYDGKLADVWSCGVTLY-VMLVG--AYPFEDQED-----PKNFRKTISRIMAVQYKIPDY 140
           ++  K +DVWS G+ L+ +   G   YP    +D      K +R      M      P  
Sbjct: 175 KFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR------MEAPEGCPPE 227

Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKS 170
           V+       ++   +  +P++R T K+++ 
Sbjct: 228 VY------KVMKDCWELDPAKRPTFKQLRE 251

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 21/153 (13%)

Query: 28  SLSQQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +L ++ I  RDL   N LLD     +L      +S+ S +            Y APEV  
Sbjct: 100 ALHREGIVCRDLNPNNILLDDRGHIQLTY----FSRWSEVEDSCDGEAVENMYCAPEVGG 155

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
             E + +  D WS G  L+ +L G    E      N   T++        IP+   +S++
Sbjct: 156 ISE-ETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLN--------IPE--WVSEE 204

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            R+LL ++   NP+ R+      +++IKSHP+F
Sbjct: 205 ARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLS 86
           S+   HRDL   N L+       +KICDFG ++  +  S      ST     ++APE + 
Sbjct: 257 SKNCVHRDLAARNVLI--CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF 314

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
              Y   L+DVWS G+ L+ +  +G  P+ +    + F   I R     Y++    H S 
Sbjct: 315 NNLYT-TLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR----GYRMAKPAHASD 369

Query: 146 DCRNLLSR 153
           +   ++ +
Sbjct: 370 EIYEIMQK 377

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 43.9 bits (103), Expect = 4e-05
 Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 40/186 (21%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEV-LSRREY 90
           I HRDLK +N L+  S    LK+ DFG +++  + S   S  V T  Y  P+V L   EY
Sbjct: 124 ILHRDLKPQNLLI--SDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEY 181

Query: 91  DGKLADVWSCGVTLYVML--VGAYP----FEDQ------------ED------------P 120
              L D+W  G     M+  V A+P     +DQ            ED            P
Sbjct: 182 STCL-DMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP 240

Query: 121 KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           + F     + +   +    YV+ ++D   L S++    P  R++ +   SH +F    PR
Sbjct: 241 ERFTLYSPKNLRQAWNKLSYVNHAED---LASKLLQCFPKNRLSAQAALSHEYFSDLPPR 297

Query: 181 --ELTE 184
             ELT+
Sbjct: 298 LWELTD 303

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 43.9 bits (103), Expect = 4e-05
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTP----AYIAPEVL 85
           S+   HRDL   N LL  +    +KICDFG ++  ++H     + G+      ++APE +
Sbjct: 255 SKNCVHRDLAARNVLL--AQGKIVKICDFGLARD-IMHDSNYVSKGSTFLPVKWMAPESI 311

Query: 86  SRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
               Y   L+DVWS G+ L+ +  +G  P+        F   I       Y++    H +
Sbjct: 312 FDNLYT-TLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS----GYRMAKPDHAT 366

Query: 145 QDCRNLLSRIFVANPSRR 162
           Q+  +++ + + + P +R
Sbjct: 367 QEVYDIMVKCWNSEPEKR 384

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 51/191 (26%)

Query: 33  ICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKS------TVGTPAYIAPEV 84
           + HRDLK  N L+  +G    R+KI D G+++  L +S  K        V T  Y APE+
Sbjct: 129 VLHRDLKPANILVMGEGPERGRVKIADMGFAR--LFNSPLKPLADLDPVVVTFWYRAPEL 186

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKN----FRKTISRIMAVQ----- 134
           L    +  K  D+W+ G     +L     F   QED K         + RI +V      
Sbjct: 187 LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPAD 246

Query: 135 ------YKIPDYVHISQDCRN-------------------------LLSRIFVANPSRRI 163
                  K+P+Y  + +D R                          LL ++   +P++RI
Sbjct: 247 KDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRI 306

Query: 164 TIKEIKSHPWF 174
           T ++    P+F
Sbjct: 307 TSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 39/180 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI--------MAVQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 195 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253

Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ E   HP+
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 14/144 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--RPKSTVGTPA-YIAPEVLS 86
           +++  HRDL   N ++       +KI DFG ++        R       P  ++APE L 
Sbjct: 137 AKKFVHRDLAARNCMVAEDLT--VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK 194

Query: 87  RREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISR-IMAVQYKIPDYVHIS 144
              +  K +DVWS GV L+ M  +   P++   + +  +  I    + +    PD     
Sbjct: 195 DGVFTTK-SDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDK---- 249

Query: 145 QDCRNLLSRIFVANPSRRITIKEI 168
                L+   +  NP  R T  EI
Sbjct: 250 --LLELMRMCWQYNPKMRPTFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 46/185 (24%), Positives = 66/185 (35%), Gaps = 51/185 (27%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK-----------SSLLHSRPK----STVGTP 77
             HRDL   N  ++       KI DFG ++           S     + +    S V T 
Sbjct: 140 FMHRDLSPANIFINSKGI--CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTL 197

Query: 78  AYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA--YPFEDQEDPKNFRKTISRIMAV-- 133
            Y APE+L   E      D+WS G     +L G   +P E++ D       + RI  +  
Sbjct: 198 WYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID------QLGRIFELLG 251

Query: 134 ---------QYKIPDYV---------------HISQDCRNLLSRIFVANPSRRITIKEIK 169
                      K+P Y                + S D  +LL  +   NP  RI+ KE  
Sbjct: 252 TPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311

Query: 170 SHPWF 174
            H +F
Sbjct: 312 KHEYF 316

Length = 335

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 30/169 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  
Sbjct: 128 SHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 185

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI------------------- 130
           Y     D+WS G     M      F    D     K +  I                   
Sbjct: 186 Y-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 244

Query: 131 -----MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                  ++  + D   + +D   LL +    NP++RI+     SHP+F
Sbjct: 245 HSKSAQPIEKFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 37/184 (20%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKST--VGTPAYIAPEVLSRRE 89
           I HRD+K EN  LD      L   DFG + K       P+     GT    +PE+L+   
Sbjct: 206 IIHRDVKTENIFLDEPENAVLG--DFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDP 263

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------------- 134
           Y  K  D+WS G+ L+ M V       ++   +  +  S I  +Q               
Sbjct: 264 YCAK-TDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC 322

Query: 135 -------------YKIPDYVH---ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL 178
                        Y IP  +    +  D   L++++   +   R + ++I S P F K  
Sbjct: 323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382

Query: 179 PREL 182
              L
Sbjct: 383 INLL 386

Length = 392

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 26/148 (17%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGT-----PA-YIAPEVLSRR 88
           HRDL   N L++ +     K+ DFG S+        ++T  T     P  + APE ++ R
Sbjct: 129 HRDLAARNILVNSNL--VCKVSDFGLSR---RLEDSEATYTTKGGKIPIRWTAPEAIAYR 183

Query: 89  EYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           ++    +DVWS G+ ++ VM  G  P+ D  +    +  I  +    Y++P  +    DC
Sbjct: 184 KFTSA-SDVWSFGIVMWEVMSYGERPYWDMSN----QDVIKAVED-GYRLPPPM----DC 233

Query: 148 RNLLSRIFV----ANPSRRITIKEIKSH 171
            + L ++ +     + + R T  +I S 
Sbjct: 234 PSALYQLMLDCWQKDRNERPTFSQIVST 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKIC--DFGYS--KSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +I HRD+K EN  ++  P     +C  DFG +     +  ++     GT A  APE+L+R
Sbjct: 202 RIIHRDIKAENIFIN-HPG---DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR 257

Query: 88  REYDGKLADVWSCGVTLYVMLVG 110
             Y G   D+WS G+ L+ M   
Sbjct: 258 DPY-GPAVDIWSAGIVLFEMATC 279

Length = 391

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 31/204 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      L+I DFG ++ +         V T  Y APE++    
Sbjct: 136 SAGIIHRDLKPSNVAVNEDC--ELRILDFGLARQA--DDEMTGYVATRWYRAPEIMLNWM 191

Query: 90  YDGKLADVWSCGVTLYVMLVGA--YPFEDQED------------PKNFRKTISRIMAVQY 135
           +  +  D+WS G  +  +L G   +P  D  D                 K IS   A +Y
Sbjct: 192 HYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKY 251

Query: 136 KIPDYVHISQD------------CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT 183
            I    H+ Q               +LL ++ V +  +RI+  E  +HP+F +    E  
Sbjct: 252 -IQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPEDE 310

Query: 184 ETAQAIYYRKENPTFSLQSVEEIT 207
             A+      EN   +++  +E+T
Sbjct: 311 PEAEPYDESPENKERTIEEWKELT 334

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 16/96 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA--------YIA 81
           S+   HRDL   N LL      + KI DFG S++        S              + A
Sbjct: 113 SKHFVHRDLAARNVLLVNRH--QAKISDFGMSRAL----GAGSDYYRATTAGRWPLKWYA 166

Query: 82  PEVLSRREYDGKLADVWSCGVTLYVML-VGAYPFED 116
           PE ++  ++  K +DVWS GVTL+     GA P+ +
Sbjct: 167 PECINYGKFSSK-SDVWSYGVTLWEAFSYGAKPYGE 201

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 46/168 (27%), Positives = 64/168 (38%), Gaps = 34/168 (20%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN L+  +   ++K+ DFG ++           V T  Y APEVL +  Y  
Sbjct: 129 IVHRDLKPENILV--TSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTY-A 185

Query: 93  KLADVWSCGVTLYVML--------------------VGAYPFEDQ-----EDPK-NFRKT 126
              D+WS G     M                     +   P ED        P+  F   
Sbjct: 186 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPR 245

Query: 127 ISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             R   VQ  +P+   I +    LL  +   NP +RI+      HP+F
Sbjct: 246 GPR--PVQSVVPE---IEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 37/174 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  L  +    LKI DFG ++ +   +     V T  Y APEV+    
Sbjct: 135 SAGIIHRDLKPGN--LAVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILNWM 190

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKIPDYVH------ 142
           +  +  D+WS G  +  ML G   F+     K++   +++I+ V     P++V       
Sbjct: 191 HYNQTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVTGVPGPEFVQKLEDKA 246

Query: 143 ----------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                                  S    +LL ++   +  +R+T  E   HP+F
Sbjct: 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 42/190 (22%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK----STVGTPAYIAPEVLSRREY 90
           HRDLK +N L +     +LKICDFG ++ +   +         V T  Y APE+     +
Sbjct: 126 HRDLKPKNILANADC--KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG--SF 181

Query: 91  DGKLA---DVWSCGVTLYVMLVGAYPFEDQEDPKNFR-----------KTISRI------ 130
             K     D+WS G     +L G   F  +                  +TISR+      
Sbjct: 182 FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKAR 241

Query: 131 ---MAVQYKIPDYVHISQDCRN-------LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
               +++ K P  V  SQ   N       LL R+   +P  R T +E  + P+F K L +
Sbjct: 242 RYLSSMRKKQP--VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF-KGLAK 298

Query: 181 ELTE-TAQAI 189
              E +AQ I
Sbjct: 299 VEREPSAQPI 308

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--PKSTVGTPA-YIAPEVLS 86
           S+   HRDL   N LL  +     KICDFG ++     S    K     P  ++APE + 
Sbjct: 232 SKNCIHRDLAARNILL--THGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIF 289

Query: 87  RREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTIS---RIMAVQYKIPDYVH 142
              Y  + +DVWS G+ L+ +  +G+ P+        F K I    R+++ +    +   
Sbjct: 290 NCVYTFE-SDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYD 348

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEI 168
           I + C +       A+P +R T K+I
Sbjct: 349 IMKSCWD-------ADPLKRPTFKQI 367

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEV-LSRR 88
           ++I HRDLK +N L++      LK+ DFG +++  + ++  S  V T  Y  P+V L   
Sbjct: 122 RKILHRDLKPQNLLINEK--GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGST 179

Query: 89  EYDGKLADVWSCGVTLYVMLVG 110
           EY   + D+W  G  LY M  G
Sbjct: 180 EYSTPI-DMWGVGCILYEMATG 200

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 51/191 (26%)

Query: 33  ICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKS------TVGTPAYIAPEV 84
           + HRDLK  N L+  +G    R+KI D G+++  L +S  K        V T  Y APE+
Sbjct: 129 VLHRDLKPANILVMGEGPERGRVKIADMGFAR--LFNSPLKPLADLDPVVVTFWYRAPEL 186

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKN----FRKTISRIMAVQ----- 134
           L    +  K  D+W+ G     +L     F   QED K         + RI  V      
Sbjct: 187 LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPAD 246

Query: 135 ------YKIPDYVHISQDCR-------------------------NLLSRIFVANPSRRI 163
                  K+P++  + +D R                         +LL ++   +P +RI
Sbjct: 247 KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRI 306

Query: 164 TIKEIKSHPWF 174
           T ++    P+F
Sbjct: 307 TSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 18/160 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPA-YIAPEVLS 86
           SQ+  HRDL   N L+  +    +KI DFG ++  +++ + +  +    P  ++APE L 
Sbjct: 155 SQKCIHRDLAARNVLVTENNV--MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF 212

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
            R Y  + +DVWS GV ++ +  +G  P+     P    + + +++   +++    + + 
Sbjct: 213 DRVYTHQ-SDVWSFGVLMWEIFTLGGSPY-----PGIPVEELFKLLKEGHRMDKPANCTN 266

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTET 185
           +   ++   + A PS R T K++      +++L R LT T
Sbjct: 267 ELYMMMRDCWHAIPSHRPTFKQL------VEDLDRILTLT 300

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 14/91 (15%)

Query: 31  QQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH----------SRPKSTVGTPAY 79
           Q I HRDLK +N ++  +   P  K+ DFG    +LL           +R    +GTP Y
Sbjct: 98  QGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIG--TLLPGVRDADVATLTRTTEVLGTPTY 155

Query: 80  IAPEVLSRREYDGKLADVWSCGVTLYVMLVG 110
            APE L R E     +D+++ G+     L G
Sbjct: 156 CAPEQL-RGEPVTPNSDLYAWGLIFLECLTG 185

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 8   LSEFVMLEGSVKMKPDI-----FFSSLSQQICHRDLKLENTLLDGSPAPRLKIC--DFGY 60
           L E + L+  +K   DI     + S+  +   HRDL   N +L       + +C  DFG 
Sbjct: 106 LPEKLPLQTLLKFMVDIALGMEYLSN--RNFIHRDLAARNCMLRED----MTVCVADFGL 159

Query: 61  SKS--SLLHSRPKSTVGTPA-YIAPEVLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           SK   S  + R       P  +IA E L+ R Y  K +DVW+ GVT++ +   G  P+  
Sbjct: 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK-SDVWAFGVTMWEIATRGQTPYPG 218

Query: 117 QEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH 171
            E+ + +          + K P+      +  +L+   + A+P  R T  +++  
Sbjct: 219 VENHEIYDYLRH---GNRLKQPE--DCLDELYDLMYSCWRADPKDRPTFTKLREV 268

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 24/107 (22%)

Query: 19  KMKPDIFFSSL---SQQIC------------HRDLKLENTLLDGSPAPRLKICDFGYSKS 63
           K +  +    L   + QIC            HRDL   N L++     R+KI DFG +K 
Sbjct: 100 KHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RVKIGDFGLTKV 157

Query: 64  SLLHSRPKSTVGTPA-----YIAPEVLSRREYDGKLADVWSCGVTLY 105
            L   +    V  P      + APE L+  ++    +DVWS GV LY
Sbjct: 158 -LPQDKEYYKVREPGESPIFWYAPESLTESKFS-VASDVWSFGVVLY 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 24/151 (15%)

Query: 29  LSQQIC-HRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSR--PKSTVGTPA-YIAPE 83
           L+ + C HRD+   N LL DG  A   KICDFG ++  +  S    K     P  ++APE
Sbjct: 228 LASKNCIHRDVAARNVLLTDGRVA---KICDFGLARDIMNDSNYVVKGNARLPVKWMAPE 284

Query: 84  VLSRREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV- 141
            +    Y  + +DVWS G+ L+ +  +G  P+        F K + R    Q   PD+  
Sbjct: 285 SIFDCVYTVQ-SDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR--GYQMSRPDFAP 341

Query: 142 ----HISQDCRNLLSRIFVANPSRRITIKEI 168
                I + C NL        P+ R T  +I
Sbjct: 342 PEIYSIMKMCWNL-------EPTERPTFSQI 365

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 19/97 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHS------RPKSTVGTPAYI 80
            + + H+D+   N ++D     ++KI D   S+       H       RP        ++
Sbjct: 135 KRGVIHKDIAARNCVIDEEL--QVKITDNALSRDLFPMDYHCLGDNENRPVK------WM 186

Query: 81  APEVLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           A E L  +EY    +DVWS GV L+ +M +G  P+ +
Sbjct: 187 ALESLVNKEYSSA-SDVWSFGVLLWELMTLGQTPYVE 222

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 22/147 (14%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVG--TPAYI---APEVLSRRE 89
           HRDL   N L+       +KI DFG S++  L+S     V    P  I   A E +   +
Sbjct: 153 HRDLATRNCLVG--KNYTIKIADFGMSRN--LYSSDYYRVQGRAPLPIRWMAWESVLLGK 208

Query: 90  YDGKLADVWSCGVTLY--VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ-- 145
           +  K +DVW+ GVTL+  + L    P+E   D     + I             +++ +  
Sbjct: 209 FTTK-SDVWAFGVTLWEILTLCREQPYEHLTDQ----QVIENAGHFFRDDGRQIYLPRPP 263

Query: 146 ----DCRNLLSRIFVANPSRRITIKEI 168
               D   L+   +  +   R T +EI
Sbjct: 264 NCPKDIYELMLECWRRDEEDRPTFREI 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 15/96 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG-----YSK---SSLLHSRPKSTVGTPAYIA 81
           S++  HRDL   N +LD S    +K+ DFG     Y K   S   H+  K  V    ++A
Sbjct: 116 SKKFVHRDLAARNCMLDESFT--VKVADFGLARDIYDKEYYSVHNHTGAKLPV---KWMA 170

Query: 82  PEVLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            E L  +++  K +DVWS GV L+ +M  GA P+ D
Sbjct: 171 LESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPD 205

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 15/146 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTP-AYIAPEVL 85
           S+   HRDL   N L+  +     KI DFG ++  L+       +     P  + APE  
Sbjct: 121 SRNYIHRDLAARNILVGENLV--CKIADFGLAR--LIEDDEYTAREGAKFPIKWTAPEAA 176

Query: 86  SRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           +   +  K +DVWS G+ L  ++  G  P+         R+ + ++    Y++P   +  
Sbjct: 177 NYGRFTIK-SDVWSFGILLTEIVTYGRVPYPGM----TNREVLEQVER-GYRMPRPPNCP 230

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKS 170
           ++  +L+ + +  +P  R T + ++S
Sbjct: 231 EELYDLMLQCWDKDPEERPTFEYLQS 256

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 38.0 bits (88), Expect = 0.004
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 16/83 (19%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKIC--DFGY------SKSSLLHSRPKSTVGTPAYIAP 82
           + I HRD+K EN L++G       IC  DFG       S S+  H     TV T    AP
Sbjct: 279 EGIIHRDIKTENVLVNGPE----DICLGDFGAACFARGSWSTPFHYGIAGTVDTN---AP 331

Query: 83  EVLSRREYDGKLADVWSCGVTLY 105
           EVL+   Y   + D+WS G+ ++
Sbjct: 332 EVLAGDPYTPSV-DIWSAGLVIF 353

Length = 461

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 11/91 (12%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA-----YIAPEVL 85
           +++ HRDL   N L+       +KI DFG +K  LL +  K            ++A E +
Sbjct: 128 RRLVHRDLAARNVLVKTPQ--HVKITDFGLAK--LLGADEKEYHAEGGKVPIKWMALESI 183

Query: 86  SRREYDGKLADVWSCGVTLY-VMLVGAYPFE 115
             R Y  + +DVWS GVT++ +M  G+ P++
Sbjct: 184 LHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 213

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 27/152 (17%)

Query: 29  LSQQIC-HRDLKLENTLLDGSPAPRLKICDFG---------YSKSSLLHSRP-KSTVGTP 77
           L  + C HRDL   N L+  +    LKI DFG         Y+ S  L   P K T    
Sbjct: 109 LESKNCIHRDLAARNCLVGENNV--LKISDFGMSREEEGGIYTVSDGLKQIPIKWT---- 162

Query: 78  AYIAPEVLSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
              APE L+   Y  + +DVWS G+ L+    +G  P+    +    ++T  RI +  Y+
Sbjct: 163 ---APEALNYGRYTSE-SDVWSYGILLWETFSLGDTPYPGMSN----QQTRERIES-GYR 213

Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
           +P      ++   L+ + +  +P  R +  EI
Sbjct: 214 MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEI 245

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.98
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.98
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.98
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.98
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.98
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.98
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.98
PTZ00283	496	serine/threonine protein kinase; Provisional	99.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.98
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.98
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.98
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.97
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.97
KOG0589	426	consensus Serine/threonine protein kinase [General	99.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.97
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.97
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.97
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.97
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.97
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
PHA02988	283	hypothetical protein; Provisional	99.97
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.97
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.97
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.97
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.97
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.97
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.96
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.96
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.96
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.96
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.96
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.96
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.96
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.96
KOG0586	596	consensus Serine/threonine protein kinase [General	99.96
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.96
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.96
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.96
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.96
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.96
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.96
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.96
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.96
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.96
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.96
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.96
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.96
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.96
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.96
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.96
KOG0584	632	consensus Serine/threonine protein kinase [General	99.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.96
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.96
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.96
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.96
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.96
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.96
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.96
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.96
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.96
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.96
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.96
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.96
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.96
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.96
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.96
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.96
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.96
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.96
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.96
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.96
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.95
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.95
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.95
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.95
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.95
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.95
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.95
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.95
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.95
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.95
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.95
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.95
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.95
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.95
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.95
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.95
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.95
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.95
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.95
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.95
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.95
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.95
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.94
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.94
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.94
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.94
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.93
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.93
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.93
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.93
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.93
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.92
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.92
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.92
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.91
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.91
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.91
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.9
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.9
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.89
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.89
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.89
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.88
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.88
KOG3653	534	consensus Transforming growth factor beta/activin	99.87
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.87
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.86
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.85
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.85
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.84
KOG1152	772	consensus Signal transduction serine/threonine kin	99.83
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.82
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.79
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.78
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.78
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.77
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.76
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.72
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.7
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.65
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.64
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.62
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.55
PRK12274	218	serine/threonine protein kinase; Provisional	99.51
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.45
PRK09188	365	serine/threonine protein kinase; Provisional	99.44
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.39
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.28
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.27
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.19
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.17
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.17
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.15
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.11
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.03
PRK10345	210	hypothetical protein; Provisional	99.01
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.99
smart00090	237	RIO RIO-like kinase.	98.97
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.92
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.87
COG4248	637	Uncharacterized protein with protein kinase and he	98.87
PRK14879	211	serine/threonine protein kinase; Provisional	98.87
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.8
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.7
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.53
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.49
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.42
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.41
KOG1243	690	consensus Protein kinase [General function predict	98.36
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.36
KOG3087	229	consensus Serine/threonine protein kinase [General	98.36
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.31
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.27
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.24
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.07
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.92
PRK09902	216	hypothetical protein; Provisional	97.74
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.26
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.18
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.92
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.37
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.33
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.76
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.75
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.72
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.64
PRK05231	319	homoserine kinase; Provisional	95.55
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.38
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.26
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	95.19
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	94.88
KOG1235	538	consensus Predicted unusual protein kinase [Genera	94.79
PF01636	239	APH: Phosphotransferase enzyme family This family	94.66
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	94.64
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.6
PRK10271	188	thiK thiamine kinase; Provisional	94.38
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.22
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	93.91
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.84
KOG2268	465	consensus Serine/threonine protein kinase [Signal	93.81
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	93.73
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.3
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.21
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.19
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	92.91
PHA03111	444	Ser/Thr kinase; Provisional	92.87
COG2334	331	Putative homoserine kinase type II (protein kinase	92.83
PRK06148	1013	hypothetical protein; Provisional	92.82
PLN02236	344	choline kinase	92.82
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	92.5
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	92.5
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.36
PRK11768	325	serine/threonine protein kinase; Provisional	91.0
PRK09550	401	mtnK methylthioribose kinase; Reviewed	90.87
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	90.74
PRK12396	409	5-methylribose kinase; Reviewed	90.29
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	90.05
PRK06149	972	hypothetical protein; Provisional	90.01
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	89.98
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	89.57
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	89.26
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	89.18
PLN02876	822	acyl-CoA dehydrogenase	86.11
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	84.02
PLN02756	418	S-methyl-5-thioribose kinase	81.69

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4e-43  Score=292.14  Aligned_cols=175  Identities=32%  Similarity=0.467  Sum_probs=146.6

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCC-CCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |||.++ .|.+++..++.         .+|++.++.|||++||+||||||+|||+..+ ..-.+||+|||+|+.......
T Consensus       255 lE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf  334 (475)
T KOG0615|consen  255 LEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF  334 (475)
T ss_pred             EEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccccee
Confidence            677666 99999998876         6778999999999999999999999999766 223589999999998877778


Q ss_pred             CCCCcCCCCCcccccccCCcC--CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCH
Q 024572           70 PKSTVGTPAYIAPEVLSRREY--DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQ  145 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  145 (265)
                      ..+.|||+.|.|||++.+..+  +..++|+||+||++|-+++|.+||.+......+.+.   +....+  ..+.|..++.
T Consensus       335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQ---I~~G~y~f~p~~w~~Ise  411 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQ---ILKGRYAFGPLQWDRISE  411 (475)
T ss_pred             hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHH---HhcCcccccChhhhhhhH
Confidence            888999999999999987553  345689999999999999999999887665433333   333333  3456778999


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +.++||.+||..||++|||+.++|+||||+...
T Consensus       412 ea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  412 EALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            999999999999999999999999999998543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-41  Score=277.90  Aligned_cols=175  Identities=27%  Similarity=0.439  Sum_probs=146.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |||.++ ||.++....+         +..+++.+|.|||. ++||||||||+|||++.++.  |||||||.++..... .
T Consensus       157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe--VKicDFGVS~~lvnS-~  233 (364)
T KOG0581|consen  157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE--VKICDFGVSGILVNS-I  233 (364)
T ss_pred             hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC--EEeccccccHHhhhh-h
Confidence            889888 9999988533         36678999999995 99999999999999998877  999999999866554 6


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCC-CChHHHHHHHHHHhhh-cccCCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ-EDPKNFRKTISRIMAV-QYKIPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  147 (265)
                      ..+++||..|||||.+.+..|..+ +||||||+.++|+++|++||... .........+..+... ....|.. .+|+++
T Consensus       234 a~tfvGT~~YMsPERi~g~~Ys~~-sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~-~fS~ef  311 (364)
T KOG0581|consen  234 ANTFVGTSAYMSPERISGESYSVK-SDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG-EFSPEF  311 (364)
T ss_pred             cccccccccccChhhhcCCcCCcc-cceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc-cCCHHH
Confidence            678899999999999999998766 99999999999999999999875 2233445555555543 2333332 499999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ++||..||.+||.+|||+.++++|||+++....
T Consensus       312 ~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~  344 (364)
T KOG0581|consen  312 RSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDP  344 (364)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCHHHhhcccc
Confidence            999999999999999999999999999865543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-39  Score=282.54  Aligned_cols=167  Identities=34%  Similarity=0.578  Sum_probs=146.9

Q ss_pred             ccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCC
Q 024572            2 QLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRP   70 (265)
Q Consensus         2 e~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~   70 (265)
                      |||.. +|.++..+|+         .++||+.|+.|||+++|+|||||..|+|++.+..  |||+|||+|...... ...
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~--VKIgDFGLAt~le~~~Erk  175 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMN--VKIGDFGLATQLEYDGERK  175 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCc--EEecccceeeeecCccccc
Confidence            78877 8888888554         4899999999999999999999999999998876  999999999876644 666


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.|||+.|.|||++...+.. ..+||||+||++|.||.|++||...    .+...+.++....+.+|.  .++.++++|
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHs-fEvDiWSlGcvmYtLL~G~PPFetk----~vkety~~Ik~~~Y~~P~--~ls~~A~dL  248 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHS-FEVDIWSLGCVMYTLLVGRPPFETK----TVKETYNKIKLNEYSMPS--HLSAEAKDL  248 (592)
T ss_pred             ceecCCCcccChhHhccCCCC-CchhhhhhhhHHHhhhhCCCCcccc----hHHHHHHHHHhcCccccc--ccCHHHHHH
Confidence            788999999999999977765 4499999999999999999999764    456677777788888887  799999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|||+.+||.|+||++.
T Consensus       249 I~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  249 IRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             HHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            999999999999999999999999543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-39  Score=279.24  Aligned_cols=170  Identities=43%  Similarity=0.702  Sum_probs=149.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC-CCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS-LLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~-~~~~~   69 (265)
                      ||||.+ .|.+++..++         ..+|+.+++.|||++||+||||||+|||++.+. +++||+|||++... .....
T Consensus        99 mEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~~~~~~  177 (370)
T KOG0583|consen   99 MEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISPGEDGL  177 (370)
T ss_pred             EEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccCCCCCc
Confidence            899987 9999998855         377899999999999999999999999999883 34999999999877 45567


Q ss_pred             CCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ..+.+|++.|+|||++.+.. |.++++||||+|++||.|++|+.||.....    ......+....+.+|.+.. +++++
T Consensus       178 l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~----~~l~~ki~~~~~~~p~~~~-S~~~~  252 (370)
T KOG0583|consen  178 LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV----PNLYRKIRKGEFKIPSYLL-SPEAR  252 (370)
T ss_pred             ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH----HHHHHHHhcCCccCCCCcC-CHHHH
Confidence            78889999999999999988 998999999999999999999999988544    3344446677777777544 99999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .|+.+||..||.+|+|+.+++.||||+.
T Consensus       253 ~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  253 SLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999999999999997

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-39  Score=275.67  Aligned_cols=169  Identities=34%  Similarity=0.555  Sum_probs=141.7

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      |||+.. .|.++|.+.+.         ..+|+++|.|||++|||||||||+|||++.++.  +||+|||.|+.+....  
T Consensus       153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmh--ikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGH--IKITDFGSAKILSPSQKS  230 (604)
T ss_pred             EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCc--EEEeeccccccCChhhcc
Confidence            355555 78888887664         667899999999999999999999999998886  9999999998543221  


Q ss_pred             ------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           69 ------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        69 ------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                                  ...+++||..|.+||++...... +.+|+|+|||++|.|+.|.+||.+.+..    .+.++++...+.
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~-~~sDiWAlGCilyQmlaG~PPFra~Ney----liFqkI~~l~y~  305 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAG-PSSDLWALGCILYQMLAGQPPFRAANEY----LIFQKIQALDYE  305 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCCCCC-cccchHHHHHHHHHHhcCCCCCccccHH----HHHHHHHHhccc
Confidence                        12457899999999999887664 5599999999999999999999987664    455566667777


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +|.  .+++.+++||+++|..||.+|+|+.+|.+||||....
T Consensus       306 fp~--~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  306 FPE--GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             CCC--CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence            776  6889999999999999999999999999999997643

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-39  Score=271.66  Aligned_cols=175  Identities=23%  Similarity=0.351  Sum_probs=151.7

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+-+++|.+++..|.          ++.||+.+|.|+|.+|+.|||+||+|||+..+..  |||+|||+|+........
T Consensus        89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~--iKiaDFGLARev~SkpPY  166 (538)
T KOG0661|consen   89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDV--IKIADFGLAREVRSKPPY  166 (538)
T ss_pred             HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccce--eEecccccccccccCCCc
Confidence            7899999999998764          4888999999999999999999999999986655  999999999988888888


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh---------------hcc
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA---------------VQY  135 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------~~~  135 (265)
                      +.++.|.||+|||++....+++.+.|+||+||+++|+.+-++.|.+.+..+++.++..-+..               ..+
T Consensus       167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf  246 (538)
T KOG0661|consen  167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF  246 (538)
T ss_pred             chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence            88899999999999998888888899999999999999999999999888887777654322               122


Q ss_pred             cCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 ~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+|.         ...++.++.+||.+||.+||.+||||.++|+||||+..
T Consensus       247 ~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  247 RFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             CCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence            2332         12368899999999999999999999999999999854

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-38  Score=276.76  Aligned_cols=166  Identities=37%  Similarity=0.670  Sum_probs=152.8

Q ss_pred             ccchHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcC
Q 024572            5 VSSLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVG   75 (265)
Q Consensus         5 ~~sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~   75 (265)
                      ++-|++++.++|.         ..||+.++.|||..+|+||||||+|+|++..+.  |||+|||+|..........+.||
T Consensus        96 gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n--IKIADFGMAsLe~~gklLeTSCG  173 (786)
T KOG0588|consen   96 GGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN--IKIADFGMASLEVPGKLLETSCG  173 (786)
T ss_pred             CchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC--EeeeccceeecccCCccccccCC
Confidence            4489999998874         788999999999999999999999999998876  99999999988777888888999


Q ss_pred             CCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhc
Q 024572           76 TPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIF  155 (265)
Q Consensus        76 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  155 (265)
                      ++.|.|||++.|.+|++.++||||.|||||.||+|+.||.+    ++++.++.++....+.+|.  .++.++++||++||
T Consensus       174 SPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD----dNir~LLlKV~~G~f~MPs--~Is~eaQdLLr~ml  247 (786)
T KOG0588|consen  174 SPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD----DNIRVLLLKVQRGVFEMPS--NISSEAQDLLRRML  247 (786)
T ss_pred             CcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC----ccHHHHHHHHHcCcccCCC--cCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999975    5667888888889999986  79999999999999


Q ss_pred             ccCCCCCCCHHHHhcCcccCCCC
Q 024572          156 VANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       156 ~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ..||.+|+|.++|++|||+.+..
T Consensus       248 ~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  248 DVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             ccCccccccHHHHhhCchhhcCC
Confidence            99999999999999999998654

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-38  Score=245.85  Aligned_cols=166  Identities=33%  Similarity=0.612  Sum_probs=137.9

Q ss_pred             chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCCCCCCCcCC
Q 024572            7 SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHSRPKSTVGT   76 (265)
Q Consensus         7 sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~~~   76 (265)
                      .|...|..|.         .++||++++.|+|.+||||||+||+|+|+.+.. ..-+||+|||+|...........+.||
T Consensus        96 dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~Gt  175 (355)
T KOG0033|consen   96 ELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGT  175 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCC
Confidence            4555555543         388999999999999999999999999995432 235999999999877766666778899


Q ss_pred             CCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCHHHHHHHHHh
Q 024572           77 PAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQDCRNLLSRI  154 (265)
Q Consensus        77 ~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~  154 (265)
                      +.|||||+++..+|..+ +|||+.|++||-|+.|.+||.+.+....+    .++....+.  .|.+..+++++++|+++|
T Consensus       176 P~fmaPEvvrkdpy~kp-vDiW~cGViLfiLL~G~~PF~~~~~~rly----e~I~~g~yd~~~~~w~~is~~Ak~LvrrM  250 (355)
T KOG0033|consen  176 PGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLY----EQIKAGAYDYPSPEWDTVTPEAKSLIRRM  250 (355)
T ss_pred             CcccCHHHhhcCCCCCc-chhhhhhHHHHHHHhCCCCCCCccHHHHH----HHHhccccCCCCcccCcCCHHHHHHHHHH
Confidence            99999999998888654 99999999999999999999986654443    444444444  456788999999999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCCC
Q 024572          155 FVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       155 L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |..||.+|+|+.|+|+|||+.+.
T Consensus       251 L~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  251 LTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             hccChhhhccHHHHhCCchhcch
Confidence            99999999999999999999754

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-38  Score=263.16  Aligned_cols=173  Identities=29%  Similarity=0.424  Sum_probs=137.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLL--   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~--   66 (265)
                      |||+.+ ||.+++...+          ..+||+.+|.|||++|||||||||+|||++. ++.  +||+|||+++....  
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~--~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGD--VKLADFGLAKKLESKG  172 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCe--EEeccCcccccccccc
Confidence            788877 9999999876          2788999999999999999999999999998 455  99999999875543  


Q ss_pred             --CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCC-CChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           67 --HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ-EDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        67 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                        ........||+.|||||++.+.....+++|||||||++.+|+||+.||... ...    ..+-.+.........+..+
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~----~~~~~ig~~~~~P~ip~~l  248 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA----EALLLIGREDSLPEIPDSL  248 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH----HHHHHHhccCCCCCCCccc
Confidence              122334679999999999986433344699999999999999999999874 221    1112222222222344469


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      +.++++||.+||..+|.+||||.++|+|||.++..+
T Consensus       249 s~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  249 SDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             CHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            999999999999999999999999999999976544

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.4e-38  Score=253.12  Aligned_cols=174  Identities=22%  Similarity=0.359  Sum_probs=142.2

Q ss_pred             CcccccchHHHHHH----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC-CCCC
Q 024572            1 MQLGVSSLSEFVML----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL-LHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~-~~~~   69 (265)
                      +|||..++-+.+.+          +..+.|++.++.|||+++||||||||+||||+.++.  +||||||+|+... ....
T Consensus        80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gv--vKLCDFGFAR~L~~pgd~  157 (396)
T KOG0593|consen   80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGV--VKLCDFGFARTLSAPGDN  157 (396)
T ss_pred             eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCc--EEeccchhhHhhcCCcch
Confidence            47788776655553          345888999999999999999999999999998887  9999999999776 4445


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc---------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ---------------  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---------------  134 (265)
                      .+.++.|.||+|||++.+...+++++||||+||++.||++|.+.|.+.++.+++..+...+....               
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G  237 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG  237 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence            55678999999999999966667779999999999999999999999998888776655432110               


Q ss_pred             ccCCC----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ..+|.          +..++.-+.+|+++||..||.+|++.++++.|+||..
T Consensus       238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            11222          2346778899999999999999999999999999943

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-37  Score=252.93  Aligned_cols=166  Identities=34%  Similarity=0.528  Sum_probs=133.0

Q ss_pred             cchHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCCCCCcC
Q 024572            6 SSLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRPKSTVG   75 (265)
Q Consensus         6 ~sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~~   75 (265)
                      +.|.-.+...+.         +.-|+.||.|||++|||||||||+|||++..|.  ++|+|||+|+..... ....++||
T Consensus       110 GeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH--i~LtDFgL~k~~~~~~~~t~tfcG  187 (357)
T KOG0598|consen  110 GELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH--IKLTDFGLCKEDLKDGDATRTFCG  187 (357)
T ss_pred             ccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc--EEEeccccchhcccCCCccccccC
Confidence            366666664443         556788999999999999999999999998887  999999999854433 44556799


Q ss_pred             CCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhc
Q 024572           76 TPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIF  155 (265)
Q Consensus        76 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  155 (265)
                      |+.|||||++.+.+|+ +++|+||||+++|+|++|.+||.+.+......    .+.......+ +..++.+++++|+++|
T Consensus       188 T~eYmAPEil~~~gy~-~~vDWWsLGillYeML~G~pPF~~~~~~~~~~----~I~~~k~~~~-p~~ls~~ardll~~LL  261 (357)
T KOG0598|consen  188 TPEYMAPEILLGKGYD-KAVDWWSLGILLYEMLTGKPPFYAEDVKKMYD----KILKGKLPLP-PGYLSEEARDLLKKLL  261 (357)
T ss_pred             CccccChHHHhcCCCC-cccchHhHHHHHHHHhhCCCCCcCccHHHHHH----HHhcCcCCCC-CccCCHHHHHHHHHHh
Confidence            9999999999999886 45999999999999999999999876544333    3333332211 2248999999999999


Q ss_pred             ccCCCCCC----CHHHHhcCcccCCCCC
Q 024572          156 VANPSRRI----TIKEIKSHPWFLKNLP  179 (265)
Q Consensus       156 ~~dP~~R~----s~~ell~h~~f~~~~~  179 (265)
                      ..||.+|.    ++.++.+||||.....
T Consensus       262 ~rdp~~RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  262 KRDPRQRLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             ccCHHHhcCCCCChHHhhcCcccccCCH
Confidence            99999996    7899999999986543

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-37  Score=247.48  Aligned_cols=164  Identities=32%  Similarity=0.578  Sum_probs=138.0

Q ss_pred             chHHHHHH---------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCC
Q 024572            7 SLSEFVML---------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTP   77 (265)
Q Consensus         7 sL~~~~~~---------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~   77 (265)
                      -|.|++..         |.+.+++.+++.|||.++||||||||+|||++++..  +||+|||++.....+......|||+
T Consensus       109 ELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~--i~isDFGFa~~l~~GekLrelCGTP  186 (411)
T KOG0599|consen  109 ELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMN--IKISDFGFACQLEPGEKLRELCGTP  186 (411)
T ss_pred             hHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccc--eEEeccceeeccCCchhHHHhcCCC
Confidence            56666653         446889999999999999999999999999998876  9999999999888888888889999


Q ss_pred             CCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh--cccCCCCCCCCHHHHHH
Q 024572           78 AYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--QYKIPDYVHISQDCRNL  150 (265)
Q Consensus        78 ~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l  150 (265)
                      .|+|||.+..     .+-+++.+|+|++|+++|.|+.|.+||......    -++..++..  ++..|.|.+++...++|
T Consensus       187 gYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm----lMLR~ImeGkyqF~speWadis~~~KdL  262 (411)
T KOG0599|consen  187 GYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM----LMLRMIMEGKYQFRSPEWADISATVKDL  262 (411)
T ss_pred             cccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH----HHHHHHHhcccccCCcchhhccccHHHH
Confidence            9999999864     222356699999999999999999999874332    223334443  45567888999999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      |.+||..||.+|+|++++|+||||.+
T Consensus       263 IsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  263 ISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             HHHHHeeCchhcccHHHHhcChHHHH
Confidence            99999999999999999999999953

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-37  Score=254.43  Aligned_cols=179  Identities=27%  Similarity=0.345  Sum_probs=140.9

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC---CC
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL---HS   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~---~~   68 (265)
                      +||-+..|...+....         ++.|++.++.|+||.+|+||||||.|+|++.+..  +||+|||+|+....   ..
T Consensus       105 ~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~--lKI~DFGLAR~~~~~~~~~  182 (359)
T KOG0660|consen  105 FELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCD--LKICDFGLARYLDKFFEDG  182 (359)
T ss_pred             hhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCC--EEeccccceeeccccCccc
Confidence            3555666776666544         5889999999999999999999999999998876  99999999987653   33


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh-----------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-----------------  131 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------------  131 (265)
                      ..+..+.|.+|+|||++.....++++.||||+|||+.||++|++.|.+.+...++..++..+.                 
T Consensus       183 ~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~  262 (359)
T KOG0660|consen  183 FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARP  262 (359)
T ss_pred             chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHH
Confidence            335567899999999998766667789999999999999999999998766555444332111                 


Q ss_pred             --hhcccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCChh
Q 024572          132 --AVQYKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE  181 (265)
Q Consensus       132 --~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~~  181 (265)
                        ......|      .+.+.++.+.+|+.+||..||.+|+|++++|+||||.......
T Consensus       263 yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  263 YIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             HHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence              0001111      1346789999999999999999999999999999998655443

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-37  Score=263.63  Aligned_cols=173  Identities=26%  Similarity=0.430  Sum_probs=141.9

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      |||..+ +|.|.+...        .+.+.++.||.|||.+||+|||||.+|||+..++.  +||+|||+|....... ..
T Consensus       349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~--vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS--VKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc--EEEeeeeeeeccccccCcc
Confidence            777777 788876644        34666788999999999999999999999998887  9999999997665554 45


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.+||++|||||++....|..+ +||||||++++||+-|.+||........+..+   .......+..+..+|+.+++|
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~K-VDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI---a~ng~P~lk~~~klS~~~kdF  502 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPK-VDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNGTPKLKNPEKLSPELKDF  502 (550)
T ss_pred             ccccCCCCccchhhhhhcccCcc-ccchhhhhHHHHHhcCCCCccCCChHHHHHHH---hhcCCCCcCCccccCHHHHHH
Confidence            56689999999999999888655 99999999999999999999875543322221   223444455566899999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..|+.+|+++.+||+||||+...+
T Consensus       503 L~~cL~~dv~~RasA~eLL~HpFl~~a~p  531 (550)
T KOG0578|consen  503 LDRCLVVDVEQRASAKELLEHPFLKMAKP  531 (550)
T ss_pred             HHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence            99999999999999999999999976544

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-36  Score=241.26  Aligned_cols=166  Identities=33%  Similarity=0.544  Sum_probs=143.1

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+.++ -|+.++++.+.         ..+|..+|.|||+++|++|||||+|||+|.+|.  +||+|||+|+.....  .
T Consensus       123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~--iKitDFGFAK~v~~r--T  198 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH--IKITDFGFAKRVSGR--T  198 (355)
T ss_pred             EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc--EEEEeccceEEecCc--E
Confidence            677666 88888887553         667888999999999999999999999999887  999999999865433  5


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.|||+.|+|||++..+++. +++|.|||||++|||+.|.+||.....    ..+..++......+|.  .++.++++|
T Consensus       199 ~TlCGTPeYLAPEii~sk~yn-kavDWWalGVLIYEMlaG~pPF~~~~~----~~iY~KI~~~~v~fP~--~fs~~~kdL  271 (355)
T KOG0616|consen  199 WTLCGTPEYLAPEIIQSKGYN-KAVDWWALGVLIYEMLAGYPPFYDDNP----IQIYEKILEGKVKFPS--YFSSDAKDL  271 (355)
T ss_pred             EEecCCccccChHHhhcCCCC-cchhHHHHHHHHHHHHcCCCCCcCCCh----HHHHHHHHhCcccCCc--ccCHHHHHH
Confidence            677999999999999998875 669999999999999999999998766    4555666777777776  589999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |+++|+.|-.+|.     ...+|..||||+..
T Consensus       272 l~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  272 LKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             HHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence            9999999999994     57899999999854

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-36  Score=250.32  Aligned_cols=173  Identities=32%  Similarity=0.527  Sum_probs=145.2

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCC-CC---CcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PA---PRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~---~~vkl~Dfg~a~~~~~   66 (265)
                      ||||.+ +|++|++.++.         ++||+.++.+||+++||||||||+||||+.. ..   ..+||+|||+|+....
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~  167 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP  167 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence            899995 99999999853         8899999999999999999999999999764 22   4699999999998888


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-CCCCCH
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQ  145 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  145 (265)
                      .....+.||++.|||||++....|+.+ +|+||+|+++|++++|+.||......+.+.    .+.......|. ...++.
T Consensus       168 ~~~a~tlcGSplYMAPEV~~~~~YdAK-ADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~----~~~k~~~~~~~~~~~~s~  242 (429)
T KOG0595|consen  168 GSMAETLCGSPLYMAPEVIMSQQYDAK-ADLWSIGTILYQCLTGKPPFDAETPKELLL----YIKKGNEIVPVLPAELSN  242 (429)
T ss_pred             hhHHHHhhCCccccCHHHHHhccccch-hhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhccccccCchhhhccC
Confidence            877788899999999999998899876 899999999999999999998876544333    22222222222 234677


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .+.+|+...|..+|..|.+..+-+.|+++..+.
T Consensus       243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  243 PLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             chhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            788999999999999999999999999987654

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=9.3e-36  Score=264.76  Aligned_cols=175  Identities=26%  Similarity=0.360  Sum_probs=135.5

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.++|.+++..             +.++.+++.+|.|||++||+||||||+|||++.++. .+||+|||+|+.....
T Consensus       146 mE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~-~vkL~DFGla~~~~~~  224 (440)
T PTZ00036        146 MEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTH-TLKLCDFGSAKNLLAG  224 (440)
T ss_pred             EecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCC-ceeeeccccchhccCC
Confidence            78888888877653             123568899999999999999999999999986542 4999999999865544


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------c
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------Q  134 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------~  134 (265)
                      .......+++.|+|||++.+....+.++|||||||++|+|++|.+||.+......+..++......             .
T Consensus       225 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  304 (440)
T PTZ00036        225 QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD  304 (440)
T ss_pred             CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc
Confidence            444556789999999998775444566999999999999999999998876655554444321110             0


Q ss_pred             ccCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIP----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ..++          .+...+.++++||.+||.+||.+|||+.++++||||..
T Consensus       305 ~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        305 IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            0111          11246789999999999999999999999999999964

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-36  Score=241.52  Aligned_cols=176  Identities=32%  Similarity=0.512  Sum_probs=146.7

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||..++ .|..-+..++           +.++|..++.|||+.+|.||||||+|+|..... +..+||+|||+|+.....
T Consensus       138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~  217 (400)
T KOG0604|consen  138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP  217 (400)
T ss_pred             eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence            555555 6777776665           378899999999999999999999999996543 335899999999987777


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  145 (265)
                      ....+.+-|++|.|||++...+|+ +.+|+||+|+++|-|++|.+||.+......-..+..++....+.+|  .|..+|+
T Consensus       218 ~~L~TPc~TPyYvaPevlg~eKyd-kscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe  296 (400)
T KOG0604|consen  218 GDLMTPCFTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSE  296 (400)
T ss_pred             ccccCCcccccccCHHHhCchhcC-CCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHH
Confidence            777888999999999999888875 5599999999999999999999887654433444555666666555  6778999


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ..+++|+.+|..+|.+|.|+.++++|||+.+.
T Consensus       297 ~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  297 AAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             HHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence            99999999999999999999999999999754

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.2e-35  Score=254.81  Aligned_cols=173  Identities=34%  Similarity=0.529  Sum_probs=141.4

Q ss_pred             Cccccc-chHHHHHHhcccc---------chHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC----
Q 024572            1 MQLGVS-SLSEFVMLEGSVK---------MKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL----   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~~~---------~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~----   66 (265)
                      |||..+ .+..+++..+.+.         ..+-|+..+|+.|+|||||||+|+|||..|+  +||+|||+|.....    
T Consensus       220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH--iKLSDFGLs~gl~~~~~~  297 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH--IKLSDFGLSTGLDKKHRI  297 (550)
T ss_pred             EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC--Eeeccccccchhhhhhhh
Confidence            787766 9999999887633         3455688899999999999999999998887  99999999852110    


Q ss_pred             ------------------C--C-----C-------------------CCCCcCCCCCcccccccCCcCCCchHhHHHHHH
Q 024572           67 ------------------H--S-----R-------------------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGV  102 (265)
Q Consensus        67 ------------------~--~-----~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  102 (265)
                                        .  .     .                   ....+|||-|+|||++.+.+|. ..+|+|||||
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~-~~cDwWSLG~  376 (550)
T KOG0605|consen  298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYG-KECDWWSLGC  376 (550)
T ss_pred             hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCC-ccccHHHHHH
Confidence                              0  0     0                   0134699999999999999975 5599999999


Q ss_pred             HHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCCCCC
Q 024572          103 TLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWFLKNLP  179 (265)
Q Consensus       103 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---s~~ell~h~~f~~~~~  179 (265)
                      |+||||.|.+||.+......+++++...  ..+.+|....++.++++||.+||. ||.+|.   ++.||.+||||+..-.
T Consensus       377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr--~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W  453 (550)
T KOG0605|consen  377 IMYEMLVGYPPFCSETPQETYRKIVNWR--ETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW  453 (550)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHh--hhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence            9999999999999988877777766543  335567667889999999999999 999998   5999999999986543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6e-36  Score=246.47  Aligned_cols=176  Identities=26%  Similarity=0.358  Sum_probs=146.4

Q ss_pred             CcccccchHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      |||...+|.+++...             -..-||..++.|||+.||+||||||.|+|+|.+. +.+||||||.|+.....
T Consensus       101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t-g~LKicDFGSAK~L~~~  179 (364)
T KOG0658|consen  101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT-GVLKICDFGSAKVLVKG  179 (364)
T ss_pred             HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-CeEEeccCCcceeeccC
Confidence            677777888888831             1256799999999999999999999999999763 46999999999988888


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-------------
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-------------  134 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------------  134 (265)
                      ....+++.|..|+|||++.+...++.+.||||.||++.||+.|++.|.+.+..+++..+++-+..+.             
T Consensus       180 epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~  259 (364)
T KOG0658|consen  180 EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE  259 (364)
T ss_pred             CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc
Confidence            8888889999999999999977667779999999999999999999999888877777665332111             


Q ss_pred             ccCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 YKIP----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 ~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...|          .....++++.+|+.++|.++|.+|.++.+++.||||..-
T Consensus       260 ~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  260 FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence            1111          123468999999999999999999999999999999643

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.3e-35  Score=240.17  Aligned_cols=175  Identities=23%  Similarity=0.287  Sum_probs=144.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||+|+.+|..++....          +..|+++++.|||.+.|+||||||+|+|+...|.  +||+|||+|+....... 
T Consensus       156 Me~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~--lKiaDFGLAR~ygsp~k~  233 (419)
T KOG0663|consen  156 MEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGI--LKIADFGLAREYGSPLKP  233 (419)
T ss_pred             HHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCc--EEecccchhhhhcCCccc
Confidence            8899998888877544          3678899999999999999999999999998887  99999999997665533 


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cCCC---------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIPD---------  139 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~---------  139 (265)
                      .+..+-|.+|+|||++.+...++.+.|+||+|||+.+++++++.|.+.+..+++.++.+.+..+.- .+|.         
T Consensus       234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~  313 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK  313 (419)
T ss_pred             CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence            344568999999999999776677799999999999999999999999888887777665432211 0110         


Q ss_pred             --------------C--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          140 --------------Y--VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       140 --------------~--~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                    +  ..++....+|+..+|.+||.+|.||.+.|+|.||...
T Consensus       314 ~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  314 MTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             cccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence                          0  1145888999999999999999999999999999763

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2.5e-35  Score=233.21  Aligned_cols=173  Identities=27%  Similarity=0.349  Sum_probs=140.6

Q ss_pred             cccccchHHHHHH----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC
Q 024572            2 QLGVSSLSEFVML----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK   71 (265)
Q Consensus         2 e~~~~sL~~~~~~----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~   71 (265)
                      ||-..+|+..+..          +.++.|++.++.|||++.|+||||||.|+||++++.  +||+|||+|+.........
T Consensus        81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~--lKiADFGLAr~f~~p~~~~  158 (318)
T KOG0659|consen   81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQ--LKIADFGLARFFGSPNRIQ  158 (318)
T ss_pred             EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCc--EEeecccchhccCCCCccc
Confidence            5566667766664          345778999999999999999999999999998887  9999999999766544333


Q ss_pred             -CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cCC-----------
Q 024572           72 -STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIP-----------  138 (265)
Q Consensus        72 -~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~-----------  138 (265)
                       ..+-|.+|+|||++.|...++..+||||.||++.||+.|.+.|.+.++-+++..+...+..+.. .+|           
T Consensus       159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~  238 (318)
T KOG0659|consen  159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI  238 (318)
T ss_pred             ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence             3378999999999999776667799999999999999999999999988887777654432221 111           


Q ss_pred             ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          139 ----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       139 ----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                .+...+.++.+|+.+||.+||.+|+|+.|+++|+||+.
T Consensus       239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence                      12235678899999999999999999999999999986

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.4e-35  Score=241.83  Aligned_cols=175  Identities=24%  Similarity=0.320  Sum_probs=138.8

Q ss_pred             CcccccchHHHHHHhc-------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+....|.+++....             +..||+.++.|||+++|+||||||.||||+.++.  +||+|||+|+.....
T Consensus        96 fe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~--lKlaDFGlAra~~ip  173 (323)
T KOG0594|consen   96 FEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGV--LKLADFGLARAFSIP  173 (323)
T ss_pred             EEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCc--EeeeccchHHHhcCC
Confidence            4566666777666544             4678999999999999999999999999998776  999999999865533


Q ss_pred             C-CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-----------
Q 024572           68 S-RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-----------  135 (265)
Q Consensus        68 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------  135 (265)
                      . .....++|.+|+|||++.+...++...||||+||++++|++++..|.+..+.+++..+...+..+..           
T Consensus       174 ~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~  253 (323)
T KOG0594|consen  174 MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPD  253 (323)
T ss_pred             cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccc
Confidence            3 3455679999999999999865556699999999999999999999998887776666554322211           


Q ss_pred             ---cCCCC----------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 ---KIPDY----------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 ---~~~~~----------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                         .++.+          ...+++..+++.+||.++|.+|.|+..++.||||...
T Consensus       254 ~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  254 YKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             ccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence               11111          1123588999999999999999999999999999764

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.1e-35  Score=246.45  Aligned_cols=171  Identities=26%  Similarity=0.327  Sum_probs=134.1

Q ss_pred             CcccccchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.++|.+++...           .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        88 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  165 (290)
T cd07862          88 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMA  165 (290)
T ss_pred             EccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCC--EEEccccceEeccCCcc
Confidence            678888888887542           24678899999999999999999999999988775  99999999875544433


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cCC----------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIP----------  138 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~----------  138 (265)
                      .....+++.|+|||.+.+..+.. ++|||||||++|+|++|++||.+......+..+......... ..+          
T Consensus       166 ~~~~~~~~~y~aPE~~~~~~~~~-~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  244 (290)
T cd07862         166 LTSVVVTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF  244 (290)
T ss_pred             cccccccccccChHHHhCCCCCC-ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhc
Confidence            44556899999999998777654 499999999999999999999887665555444332110000 000          


Q ss_pred             ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          139 ----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       139 ----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                                ....++..+++||.+||..||++|||+.++++||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         245 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             cCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                      012467888999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-34  Score=249.09  Aligned_cols=205  Identities=26%  Similarity=0.323  Sum_probs=145.4

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||+|+..|..++..++          .++|++.++.++|.+||||.||||.|+|+-. |  ++||+|||+|........ 
T Consensus       439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G--~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-G--RLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-e--eEEeeeechhcccCccccc
Confidence            8999999999887665          3788999999999999999999999999863 3  499999999986554432 


Q ss_pred             --CCCCcCCCCCcccccccCCcCC----------CchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYD----------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI  137 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~----------~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  137 (265)
                        ....+||+.||+||.+....+.          ++++||||||||||+|+.|+.||...   .+....+..+......+
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---~n~~aKl~aI~~P~~~I  592 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---INQIAKLHAITDPNHEI  592 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH---HHHHHHHHhhcCCCccc
Confidence              2345899999999998653322          34599999999999999999999653   22334444455543322


Q ss_pred             CCCCCCC-HHHHHHHHHhcccCCCCCCCHHHHhcCcccCC-CCChhhHHHHHHHh-hhcCCCCCCCcCHHHHHHHHH
Q 024572          138 PDYVHIS-QDCRNLLSRIFVANPSRRITIKEIKSHPWFLK-NLPRELTETAQAIY-YRKENPTFSLQSVEEITKIVE  211 (265)
Q Consensus       138 ~~~~~~~-~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  211 (265)
                      +.+..-+ .++.++++.||.+||++|||+.++|+|||+.- .++.+......... .-...+.........+.+.++
T Consensus       593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~~~m~~~~~~~~k~~e~~~v~~d~~n~i~~ql~  669 (677)
T KOG0596|consen  593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPVEQMAKLTTNEMKYVEGQLVDLDSPNSILKQLK  669 (677)
T ss_pred             cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccccchHHHHHHHHHHHhcccCCCCcccHHHHHHHHH
Confidence            2221122 23899999999999999999999999999976 44433322221111 111334445555555544443

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.6e-34  Score=245.19  Aligned_cols=176  Identities=20%  Similarity=0.303  Sum_probs=131.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.++|.+++..+.          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~  159 (303)
T cd07869          82 FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE--LKLADFGLARAKSVPSHT  159 (303)
T ss_pred             EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEECCCCcceeccCCCcc
Confidence            7888888888876532          4678999999999999999999999999987765  999999998643222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc---------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ---------------  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---------------  134 (265)
                      .....+++.|+|||++.+....+.++||||+||++|+|++|..||.+..+.......+.......               
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (303)
T cd07869         160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK  239 (303)
T ss_pred             CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence            23456889999999987655445669999999999999999999987654322222111111000               


Q ss_pred             ---cc--CC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          135 ---YK--IP-------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       135 ---~~--~~-------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                         ..  .+       ....++..+.+||.+||..||.+|||+.++++||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence               00  00       0012456789999999999999999999999999997653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.3e-34  Score=244.01  Aligned_cols=172  Identities=23%  Similarity=0.325  Sum_probs=131.4

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++..++          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...... .
T Consensus        82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~--~kl~DfG~~~~~~~~~~~  159 (288)
T cd07871          82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGE--LKLADFGLARAKSVPTKT  159 (288)
T ss_pred             EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEECcCcceeeccCCCcc
Confidence            6888888888876543          3567899999999999999999999999988765  9999999987433222 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------c
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------Q  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------~  134 (265)
                      .....+++.|+|||++.+....+.++||||+||++|+|++|+.||.+......+..........               .
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS  239 (288)
T ss_pred             ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence            2344688999999998765444566999999999999999999998766544433332211100               0


Q ss_pred             ccCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...+.         ...++.++++||.+||.+||.+|||+.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            00111         12467889999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-35  Score=250.08  Aligned_cols=168  Identities=31%  Similarity=0.618  Sum_probs=149.9

Q ss_pred             ccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            2 QLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         2 e~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+.+ .|.||||.+.          ...||+.++.|||+..+|||||||+||++... .+-|||+|||++..+.+....
T Consensus        97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcchh
Confidence            77877 9999999764          36789999999999999999999999987643 235999999999988888888


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.||++.|.|||++.+..|+.+++||||||+|||.|++|++||...++.+.    +..++...+..|.  .++.+|++|
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET----LTmImDCKYtvPs--hvS~eCrdL  249 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET----LTMIMDCKYTVPS--HVSKECRDL  249 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh----hhhhhcccccCch--hhhHHHHHH
Confidence            9999999999999999999999999999999999999999999998877554    4445667777776  689999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      |..||..||.+|.+.++|..|+|++.
T Consensus       250 I~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  250 IQSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             HHHHHhcCchhhccHHHHhccccccC
Confidence            99999999999999999999999974

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-35  Score=251.58  Aligned_cols=174  Identities=31%  Similarity=0.537  Sum_probs=147.7

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCC--CcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA--PRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~--~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||||.+ .|.+.+..+        ..+++++.++.|||+.||+||||||+|+|+.....  +.+|++|||++........
T Consensus       115 mEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~  194 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGER  194 (382)
T ss_pred             EEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCce
Confidence            789986 899998876        35888999999999999999999999999976532  4699999999987766556


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++....|... +||||+|+++|.|++|.+||.+......+..+...  ...+..+.+..++..+++
T Consensus       195 ~~~~~Gtp~y~APEvl~~~~y~~~-~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~--~~~f~~~~w~~is~~akd  271 (382)
T KOG0032|consen  195 LHTIVGTPEYVAPEVLGGRPYGDE-VDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG--DFDFTSEPWDDISESAKD  271 (382)
T ss_pred             EeeecCCccccCchhhcCCCCCcc-cchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC--CCCCCCCCccccCHHHHH
Confidence            677789999999999998787655 99999999999999999999998765555533322  224456677789999999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ||++||..||.+|+|+.++|+|||++..
T Consensus       272 ~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  272 FIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHHhcccCcccCCCHHHHhcCccccCC
Confidence            9999999999999999999999999864

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.9e-34  Score=242.63  Aligned_cols=173  Identities=25%  Similarity=0.351  Sum_probs=133.9

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++||+||||||+|||++.++.  +||+|||++.......
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~--~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH--IRISDLGLAVQIPEGE  156 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC--EEEeeCCCcEEcCCCC
Confidence            566654 7877765322           3567899999999999999999999999987765  9999999987654333


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......|+..|+|||++.+..++. ++|||||||++|+|++|+.||...............+....  ......++..+.
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~-~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~  233 (285)
T cd05631         157 TVRGRVGTVGYMAPEVINNEKYTF-SPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ--EEYSEKFSEDAK  233 (285)
T ss_pred             eecCCCCCCCccCHhhhcCCCCCc-ccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--ccCCccCCHHHH
Confidence            334557899999999998877754 48999999999999999999987654332222222222222  223336889999


Q ss_pred             HHHHHhcccCCCCCCC-----HHHHhcCcccCCCC
Q 024572          149 NLLSRIFVANPSRRIT-----IKEIKSHPWFLKNL  178 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s-----~~ell~h~~f~~~~  178 (265)
                      +||.+||..||.+||+     +.++++||||....
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         234 SICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             HHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            9999999999999997     89999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=7.3e-35  Score=255.62  Aligned_cols=174  Identities=24%  Similarity=0.305  Sum_probs=139.7

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      .|+.+.+|.+|+..+.           +++||+.+|.+||+.||||+||||+||||...+...|||+|||.|......  
T Consensus       267 fELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~--  344 (586)
T KOG0667|consen  267 FELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR--  344 (586)
T ss_pred             ehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc--
Confidence            4788889999998654           488899999999999999999999999998776668999999998754333  


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh-----------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA-----------------  132 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-----------------  132 (265)
                      ..+++.+..|+|||++.|.+|+.. .||||||||++||++|.+.|.+.+..+++..++.-+..                 
T Consensus       345 vytYiQSRfYRAPEVILGlpY~~~-IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~  423 (586)
T KOG0667|consen  345 VYTYIQSRFYRAPEVILGLPYDTA-IDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFT  423 (586)
T ss_pred             ceeeeeccccccchhhccCCCCCc-cceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehh
Confidence            337889999999999999999766 99999999999999999999998877776655442210                 


Q ss_pred             h-------------------------------cccCC-CCC--------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          133 V-------------------------------QYKIP-DYV--------HISQDCRNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       133 ~-------------------------------~~~~~-~~~--------~~~~~~~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                      .                               ....| ...        .-...+.+||++||.+||.+|+|+.++|+||
T Consensus       424 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hp  503 (586)
T KOG0667|consen  424 SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHP  503 (586)
T ss_pred             ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCc
Confidence            0                               00011 000        0124578999999999999999999999999


Q ss_pred             ccCCC
Q 024572          173 WFLKN  177 (265)
Q Consensus       173 ~f~~~  177 (265)
                      ||...
T Consensus       504 fl~~~  508 (586)
T KOG0667|consen  504 FLTGT  508 (586)
T ss_pred             ccccc
Confidence            99843

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.3e-34  Score=248.01  Aligned_cols=168  Identities=32%  Similarity=0.503  Sum_probs=133.6

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~--~kl~DfG~a~~~~~~~~~  151 (323)
T cd05571          74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGH--IKITDFGLCKEGISDGAT  151 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC--EEEeeCCCCcccccCCCc
Confidence            677765 8888876543         3578999999999999999999999999988765  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..+. .++|||||||++|+|++|+.||........    ...+.......|  ..++.++.+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~Pf~~~~~~~~----~~~~~~~~~~~p--~~~~~~~~~  224 (323)
T cd05571         152 MKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILMEEIRFP--RTLSPEAKS  224 (323)
T ss_pred             ccceecCccccChhhhcCCCCC-ccccCcccchhhhhhhcCCCCCCCCCHHHH----HHHHHcCCCCCC--CCCCHHHHH
Confidence            3345699999999999887775 459999999999999999999977543222    222222233333  368999999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      ||.+||..||++||     ++.++++||||...
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         225 LLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             HHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999999999999     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-35  Score=246.34  Aligned_cols=164  Identities=34%  Similarity=0.518  Sum_probs=138.1

Q ss_pred             HHHHHHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC------CCCCCcCCCCCccc
Q 024572            9 SEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS------RPKSTVGTPAYIAP   82 (265)
Q Consensus         9 ~~~~~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~------~~~~~~~~~~y~aP   82 (265)
                      ..+...|..++-+..+|.|||.+|||||||||+|+||++++.  |||+|||.+.......      ......||+.|+||
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~--VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~AP  284 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT--VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAP  284 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc--EEeeccceeeecccCCccccHHHHhhcCCCccccch
Confidence            345666777888899999999999999999999999998876  9999999987542221      12235799999999


Q ss_pred             ccccC---CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCC
Q 024572           83 EVLSR---REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANP  159 (265)
Q Consensus        83 E~~~~---~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  159 (265)
                      |...+   ..+.+.+.||||+||+||.|+.|+.||.+...    .....++......+|....+.+.+++||.+||.+||
T Consensus       285 E~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP  360 (576)
T KOG0585|consen  285 ELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDP  360 (576)
T ss_pred             HhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcCh
Confidence            99877   55778889999999999999999999988544    455556667777888877889999999999999999


Q ss_pred             CCCCCHHHHhcCcccCCCC
Q 024572          160 SRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       160 ~~R~s~~ell~h~~f~~~~  178 (265)
                      .+|+++.+|..|||.....
T Consensus       361 ~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  361 EQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             hheeehhhheecceeccCC
Confidence            9999999999999987653

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.2e-34  Score=249.97  Aligned_cols=167  Identities=29%  Similarity=0.539  Sum_probs=140.1

Q ss_pred             cccccchHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC-
Q 024572            2 QLGVSSLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-   71 (265)
Q Consensus         2 e~~~~sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~-   71 (265)
                      |||.++|...+...         .+..++..+|+|||+++|+|||+||.|||++..+.  +|+||||+|+......... 
T Consensus        81 e~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~--~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   81 EYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGT--LKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             hhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCc--eeechhhhhhhcccCceeee
Confidence            78888888888754         45677899999999999999999999999998876  9999999998766544333 


Q ss_pred             CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 024572           72 STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL  151 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  151 (265)
                      ...||+.|||||++.+..|+.. +|+||+||++||+++|++||...    .+...++.+......+|.  ..+..+++|+
T Consensus       159 sikGtPlYmAPElv~e~pyd~~-sDlWslGcilYE~~~G~PPF~a~----si~~Lv~~I~~d~v~~p~--~~S~~f~nfl  231 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEEQPYDHT-SDLWSLGCILYELYVGQPPFYAR----SITQLVKSILKDPVKPPS--TASSSFVNFL  231 (808)
T ss_pred             eccCcccccCHHHHcCCCccch-hhHHHHHHHHHHHhcCCCCchHH----HHHHHHHHHhcCCCCCcc--cccHHHHHHH
Confidence            3459999999999999888765 99999999999999999999764    334555555554444444  7899999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          152 SRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       152 ~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ..+|.+||.+|.|..+++.|||+++.
T Consensus       232 ~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  232 QGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             HHHhhcChhhcccHHHHhcChHHhhh
Confidence            99999999999999999999998754

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.9e-34  Score=246.66  Aligned_cols=173  Identities=28%  Similarity=0.427  Sum_probs=134.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        84 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~--~kl~DfG~~~~~~~~~~~  161 (332)
T cd05614          84 LDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGH--VVLTDFGLSKEFLSEEKE  161 (332)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCC--EEEeeCcCCccccccCCC
Confidence            677765 8888876544         3557899999999999999999999999988775  9999999987543222  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......||+.|+|||++.+....+.++|||||||++|+|++|+.||...............+.....  +.+..++..+.
T Consensus       162 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  239 (332)
T cd05614         162 RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP--PFPSFIGPEAQ  239 (332)
T ss_pred             ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHH
Confidence            2223568999999999987654456699999999999999999999754332222233333333222  23346889999


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      +||.+||..||++||     ++.++++||||+..
T Consensus       240 ~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         240 DLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999999999999     88899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=7.1e-34  Score=246.79  Aligned_cols=174  Identities=26%  Similarity=0.384  Sum_probs=132.3

Q ss_pred             CcccccchHHHHHH-------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVML-------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~-------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||+++++|.+++..       ..++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...........
T Consensus       105 ~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~~~  182 (359)
T cd07876         105 MELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFMMTPY  182 (359)
T ss_pred             EeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEEecCCCccccccCccCCCC
Confidence            68888887776542       235778999999999999999999999999988775  999999998754444344455


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH------------------hhhcc
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI------------------MAVQY  135 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~------------------~~~~~  135 (265)
                      .+|+.|+|||++.+..+..+ +|||||||++|+|++|+.||.+......+.......                  .....
T Consensus       183 ~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (359)
T cd07876         183 VVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRP  261 (359)
T ss_pred             cccCCCCCchhccCCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCC
Confidence            78999999999988777654 999999999999999999998765433332222111                  00000


Q ss_pred             cCC------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 KIP------------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 ~~~------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ..+                  .....+..+++||.+||..||++|||+.++++||||...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         262 QYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW  321 (359)
T ss_pred             CCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence            000                  011245788999999999999999999999999999643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-34  Score=230.16  Aligned_cols=158  Identities=28%  Similarity=0.410  Sum_probs=130.9

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhh--cC--ceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLS--QQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~--~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||+|+. +|++++..-.             ..-|++.+|.+||+  ..  |+||||||.||+++.++.  |||+|||+++
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv--vKLGDfGL~r  176 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV--VKLGDFGLGR  176 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc--eeeccchhHh
Confidence            889987 9999987532             25678899999999  56  999999999999998887  9999999998


Q ss_pred             cCCCCCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC
Q 024572           63 SSLLHSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        63 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (265)
                      ....... ..+.+|||.||+||++...+|+.+ +||||+||++|||+.-++||.+.    ++.....++....+..-...
T Consensus       177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~k-SDiWslGCllyEMcaL~~PF~g~----n~~~L~~KI~qgd~~~~p~~  251 (375)
T KOG0591|consen  177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFK-SDIWSLGCLLYEMCALQSPFYGD----NLLSLCKKIEQGDYPPLPDE  251 (375)
T ss_pred             HhcchhHHHHhhcCCCcccCHHHHhcCCCCcc-hhHHHHHHHHHHHHhcCCCcccc----cHHHHHHHHHcCCCCCCcHH
Confidence            6654433 345689999999999999999755 99999999999999999999986    45566666666655422224


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCH
Q 024572          142 HISQDCRNLLSRIFVANPSRRITI  165 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~  165 (265)
                      .+|.++..||..|+..||.+||+.
T Consensus       252 ~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  252 HYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HhhhHHHHHHHHHccCCcccCCCc
Confidence            689999999999999999999984

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=8e-34  Score=238.82  Aligned_cols=171  Identities=25%  Similarity=0.305  Sum_probs=132.2

Q ss_pred             CcccccchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.++|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        86 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~--~kl~dfg~~~~~~~~~~  163 (288)
T cd07863          86 FEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ--VKLADFGLARIYSCQMA  163 (288)
T ss_pred             EcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEECccCccccccCccc
Confidence            677777888877642           23677899999999999999999999999988775  99999999875544433


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-------ccCC----
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-------YKIP----  138 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~----  138 (265)
                      .....++..|+|||++.+..++. ++||||+||++|+|++|++||........+.++........       ...+    
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~-~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07863         164 LTPVVVTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAF  242 (288)
T ss_pred             CCCccccccccCchHhhCCCCCC-cchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccccccc
Confidence            34456899999999998777654 59999999999999999999987665544444333211000       0000    


Q ss_pred             ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          139 ----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       139 ----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                                ....++..+.+||.+||..||.+|||+.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         243 SPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                      012467889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-34  Score=244.38  Aligned_cols=172  Identities=23%  Similarity=0.312  Sum_probs=138.9

Q ss_pred             cccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--C
Q 024572            2 QLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--R   69 (265)
Q Consensus         2 e~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--~   69 (265)
                      ||-..+|.-++..-          -..+||+.+|.|||++||+|||||.+|||||.++.  +||+|||+|+......  .
T Consensus       198 eYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~--LKiaDFGLAr~y~~~~~~~  275 (560)
T KOG0600|consen  198 EYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGV--LKIADFGLARFYTPSGSAP  275 (560)
T ss_pred             ecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCC--EEeccccceeeccCCCCcc
Confidence            44455555555433          23789999999999999999999999999998887  9999999998654443  3


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc------cCCC----
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY------KIPD----  139 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~----  139 (265)
                      .+..+.|+||+|||++.|...++.++|+||.||||.||++|++.|.+....+++..+.+.......      .+|.    
T Consensus       276 ~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~  355 (560)
T KOG0600|consen  276 YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIF  355 (560)
T ss_pred             cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccccc
Confidence            456679999999999999877778899999999999999999999998887777666554322111      1111    


Q ss_pred             -------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          140 -------------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       140 -------------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                                   +..++..+.+|+..||..||.+|.||.++|+|+||.
T Consensus       356 kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  356 KPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             CCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence                         123678899999999999999999999999999994

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=5.7e-34  Score=245.09  Aligned_cols=174  Identities=24%  Similarity=0.369  Sum_probs=130.4

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||+++++|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......  
T Consensus        83 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~~  160 (338)
T cd07859          83 FELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK--LKICDFGLARVAFNDTPTA  160 (338)
T ss_pred             EecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc--EEEccCccccccccccCcc
Confidence            7899999998876543         3678899999999999999999999999988776  99999999874322211  


Q ss_pred             --CCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-----------HH----
Q 024572           70 --PKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS-----------RI----  130 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~-----------~~----  130 (265)
                        .....+++.|+|||++.+  ..+ +.++|||||||++|+|++|+.||.+............           .+    
T Consensus       161 ~~~~~~~~t~~y~aPE~~~~~~~~~-~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  239 (338)
T cd07859         161 IFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK  239 (338)
T ss_pred             ccccCCCCCCCcCCHHHHhcccccc-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence              123468999999999865  344 4569999999999999999999977553322111100           00    


Q ss_pred             ----h---hhcccCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          131 ----M---AVQYKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       131 ----~---~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                          .   ......+   ....+++.+.++|.+||..||++|||+.++++||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence                0   0000000   122467889999999999999999999999999999754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=5.2e-34  Score=255.72  Aligned_cols=176  Identities=22%  Similarity=0.344  Sum_probs=129.7

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCC--------------CcEEEe
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPA--------------PRLKIC   56 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~--------------~~vkl~   56 (265)
                      ||+++++|.+++..++         ++.+++.+|.|||+ .|||||||||+|||++..+.              ..+||+
T Consensus       211 ~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~  290 (467)
T PTZ00284        211 MPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRIC  290 (467)
T ss_pred             EeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEEC
Confidence            6778888988887643         46788999999998 59999999999999976542              149999


Q ss_pred             ccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh----
Q 024572           57 DFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA----  132 (265)
Q Consensus        57 Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----  132 (265)
                      |||.+...  .......+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+......+..+......    
T Consensus       291 DfG~~~~~--~~~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~  367 (467)
T PTZ00284        291 DLGGCCDE--RHSRTAIVSTRHYRSPEVVLGLGWM-YSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSE  367 (467)
T ss_pred             CCCccccC--ccccccccCCccccCcHHhhcCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHH
Confidence            99987532  2233456799999999999987775 4599999999999999999999876543332221111000    


Q ss_pred             ---------------hccc-CCC----------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          133 ---------------VQYK-IPD----------------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       133 ---------------~~~~-~~~----------------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                                     .... .+.                .....+.+.+||.+||.+||.+|||+.++|+||||.+..+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        368 WAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             HHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence                           0000 000                0011356789999999999999999999999999986543

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=8.9e-34  Score=245.78  Aligned_cols=174  Identities=26%  Similarity=0.341  Sum_probs=132.8

Q ss_pred             CcccccchHHHHHH-------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVML-------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~-------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+++..       ..++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...........
T Consensus       101 ~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~~~~  178 (355)
T cd07874         101 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPY  178 (355)
T ss_pred             hhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCC--EEEeeCcccccCCCccccCCc
Confidence            78888888776643       234778899999999999999999999999988765  999999999765444444456


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh------------------hcc
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA------------------VQY  135 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------------~~~  135 (265)
                      .++..|+|||++.+..+.. ++|||||||++|+|++|+.||.+......+...+.....                  ...
T Consensus       179 ~~t~~y~aPE~~~~~~~~~-~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (355)
T cd07874         179 VVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP  257 (355)
T ss_pred             cccCCccCHHHHcCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCC
Confidence            7899999999998877754 499999999999999999999876544333322221100                  000


Q ss_pred             -----cCC-------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 -----KIP-------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 -----~~~-------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                           ..+             .....+..+++||.+||..||.+|||+.++++||||...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             ccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence                 000             011235678999999999999999999999999999644

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=8.9e-34  Score=246.61  Aligned_cols=173  Identities=27%  Similarity=0.356  Sum_probs=133.0

Q ss_pred             CcccccchHHHHHHh-------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE-------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~~-------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+++...       .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...........
T Consensus       108 ~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DfG~a~~~~~~~~~~~~  185 (364)
T cd07875         108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPY  185 (364)
T ss_pred             EeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCc--EEEEeCCCccccCCCCcccCC
Confidence            788888888766432       34778899999999999999999999999988775  999999999765444344456


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc---------------ccCC
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ---------------YKIP  138 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---------------~~~~  138 (265)
                      .++..|+|||++.+..+.. ++|||||||++|+|++|+.||.+......+...+.......               ...+
T Consensus       186 ~~t~~y~aPE~~~~~~~~~-~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (364)
T cd07875         186 VVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP  264 (364)
T ss_pred             cccCCcCCHHHHhCCCCCc-hhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCC
Confidence            7899999999998877654 59999999999999999999987665444433332111000               0000


Q ss_pred             ---------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          139 ---------------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       139 ---------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                           .....+..+++||.+||..||.+|||+.++++||||..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             CcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                                 00113467899999999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-34  Score=252.64  Aligned_cols=152  Identities=33%  Similarity=0.571  Sum_probs=129.3

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC-CCCCCCCCcCCCCCcccccccCCcCCCchHh
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL-LHSRPKSTVGTPAYIAPEVLSRREYDGKLAD   96 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D   96 (265)
                      ..-++.+|.|||++||||||||.+|||+|..|.  +||+|||+|+... ......++|||+.|+|||++.+..|+ .++|
T Consensus       474 aAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh--~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt-~aVD  550 (694)
T KOG0694|consen  474 AAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH--VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYT-RAVD  550 (694)
T ss_pred             HHHHHHHHHHHHhcCceeeecchhheEEcccCc--EEecccccccccCCCCCccccccCChhhcChhhhccCccc-chhh
Confidence            444677899999999999999999999998887  9999999998765 45566778999999999999998885 5599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcC
Q 024572           97 VWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT-----IKEIKSH  171 (265)
Q Consensus        97 iwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~ell~h  171 (265)
                      +|||||+||+|+.|..||.+.+..+.+..++    ......|.  .++.++.++|+++|.++|++|..     +.+|.+|
T Consensus       551 WW~lGVLlyeML~Gq~PF~gddEee~FdsI~----~d~~~yP~--~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h  624 (694)
T KOG0694|consen  551 WWGLGVLLYEMLVGESPFPGDDEEEVFDSIV----NDEVRYPR--FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH  624 (694)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh----cCCCCCCC--cccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence            9999999999999999999987765554443    33444444  68999999999999999999995     5889999


Q ss_pred             cccCCCC
Q 024572          172 PWFLKNL  178 (265)
Q Consensus       172 ~~f~~~~  178 (265)
                      |||+...
T Consensus       625 pFFr~i~  631 (694)
T KOG0694|consen  625 PFFRSID  631 (694)
T ss_pred             CccccCC
Confidence            9998654

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-34  Score=239.20  Aligned_cols=165  Identities=32%  Similarity=0.535  Sum_probs=131.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++..++         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ..
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~--~kl~Dfg~~~~~~~--~~  155 (291)
T cd05612          80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGH--IKLTDFGFAKKLRD--RT  155 (291)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--EEEEecCcchhccC--Cc
Confidence            676654 8998887544         3567899999999999999999999999987765  99999999875432  22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....|++.|+|||++.+..++ .++|||||||++|+|++|+.||.+.......    ..+......++  ..++..+++|
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~--~~~~~~~~~l  228 (291)
T cd05612         156 WTLCGTPEYLAPEVIQSKGHN-KAVDWWALGILIYEMLVGYPPFFDDNPFGIY----EKILAGKLEFP--RHLDLYAKDL  228 (291)
T ss_pred             ccccCChhhcCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCcCCC--ccCCHHHHHH
Confidence            345689999999999887765 5599999999999999999999876543322    22333333333  3568899999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~  176 (265)
                      |++||..||.+|++     +.++++||||..
T Consensus       229 i~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         229 IKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence            99999999999995     999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.9e-34  Score=244.96  Aligned_cols=173  Identities=23%  Similarity=0.301  Sum_probs=130.8

Q ss_pred             CcccccchHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++.+|.+++...        .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++....  ....
T Consensus        99 ~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~--~kl~Dfg~~~~~~~--~~~~  174 (343)
T cd07878          99 TNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE--LRILDFGLARQADD--EMTG  174 (343)
T ss_pred             eecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCC--EEEcCCccceecCC--CcCC
Confidence            577778887776532        34778999999999999999999999999988776  99999999875432  2344


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------------
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------------  133 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  133 (265)
                      ..+++.|+|||++.+....+.++|||||||++|+|++|+.||........+..........                   
T Consensus       175 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07878         175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS  254 (343)
T ss_pred             ccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc
Confidence            5789999999999875444566999999999999999999997755433332222110000                   


Q ss_pred             cccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          134 QYKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       134 ~~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ....+      .....++.+.+||.+||..||.+|||+.++++||||...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         255 LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             cccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            00000      012356778999999999999999999999999999764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.3e-34  Score=241.82  Aligned_cols=168  Identities=32%  Similarity=0.520  Sum_probs=133.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        72 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~  149 (312)
T cd05585          72 LAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGH--IALCDFGLCKLNMKDDDK  149 (312)
T ss_pred             EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCc--EEEEECcccccCccCCCc
Confidence            677765 8888886554         3567899999999999999999999999988775  999999998743222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||........    ...+.......+  ..+++.+++
T Consensus       150 ~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~pf~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~  222 (312)
T cd05585         150 TNTFCGTPEYLAPELLLGHGYT-KAVDWWTLGVLLYEMLTGLPPFYDENVNEM----YRKILQEPLRFP--DGFDRDAKD  222 (312)
T ss_pred             cccccCCcccCCHHHHcCCCCC-CccceechhHHHHHHHhCCCCcCCCCHHHH----HHHHHcCCCCCC--CcCCHHHHH
Confidence            3345699999999999887775 459999999999999999999987554332    223333333333  368899999


Q ss_pred             HHHHhcccCCCCCC---CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI---TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~---s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||   ++.++++||||.+.
T Consensus       223 li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         223 LLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            99999999999997   57999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.1e-33  Score=241.93  Aligned_cols=168  Identities=31%  Similarity=0.493  Sum_probs=133.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        75 ~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~--~kL~DfG~~~~~~~~~~~  152 (320)
T cd05590          75 MEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGH--CKLADFGMCKEGIFNGKT  152 (320)
T ss_pred             EcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc--EEEeeCCCCeecCcCCCc
Confidence            788765 8988876543         3667899999999999999999999999988776  999999998753222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....|++.|+|||++.+..+.. ++|||||||++|+|++|+.||........    ...+.......|  ..++.++++
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~--~~~~~~~~~  225 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGP-SVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDEVVYP--TWLSQDAVD  225 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCC-ccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcCCCCCC--CCCCHHHHH
Confidence            33456899999999998777654 49999999999999999999987654332    223333333333  357899999


Q ss_pred             HHHHhcccCCCCCCCH------HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI------KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~------~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|+++      .++++||||...
T Consensus       226 li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         226 ILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             HHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            9999999999999998      999999999754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.3e-33  Score=240.89  Aligned_cols=174  Identities=22%  Similarity=0.302  Sum_probs=124.8

Q ss_pred             CcccccchHHHHHH------------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCC--CCCcEEEeccCC
Q 024572            1 MQLGVSSLSEFVML------------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGS--PAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~~sL~~~~~~------------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~   60 (265)
                      ||+++++|.+++..                  +.++.|++.++.|||++||+||||||+|||+...  ..+.+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            67888888777653                  2346789999999999999999999999999432  223599999999


Q ss_pred             cccCCCCC----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---------HHHHHHH
Q 024572           61 SKSSLLHS----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---------KNFRKTI  127 (265)
Q Consensus        61 a~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---------~~~~~~~  127 (265)
                      ++......    ......+|+.|+|||++.+....+.++||||+||++|+|++|++||......         ..+..+.
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~  238 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF  238 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence            97543221    1234568999999999987654556699999999999999999999754321         1111111


Q ss_pred             HHHh------------------------hhcccC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          128 SRIM------------------------AVQYKI--------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       128 ~~~~------------------------~~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ....                        ......        ......+..+.+||.+||..||.+|||+.++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            1000                        000000        0011235678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-34  Score=241.90  Aligned_cols=170  Identities=26%  Similarity=0.326  Sum_probs=136.6

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||+|++ ++.+.+.....         ++.++.++.|||+++.+|||||+.|||+...+.  +||+|||++....... .
T Consensus        90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~--vkl~DfgVa~ql~~~~~r  167 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGD--VKLADFGVAGQLTNTVKR  167 (467)
T ss_pred             HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCc--EEEEecceeeeeechhhc
Confidence            788877 88888876655         566788999999999999999999999988865  9999999986554433 3


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ..+++||+.|||||++.+..|+.+ +||||||++.++|++|.+|+........    +..+.... +......+++.+++
T Consensus       168 r~tfvGTPfwMAPEVI~~~~Y~~K-ADIWSLGITaiEla~GePP~s~~hPmrv----lflIpk~~-PP~L~~~~S~~~kE  241 (467)
T KOG0201|consen  168 RKTFVGTPFWMAPEVIKQSGYDTK-ADIWSLGITAIELAKGEPPHSKLHPMRV----LFLIPKSA-PPRLDGDFSPPFKE  241 (467)
T ss_pred             cccccccccccchhhhccccccch-hhhhhhhHHHHHHhcCCCCCcccCcceE----EEeccCCC-CCccccccCHHHHH
Confidence            367789999999999998888766 8999999999999999999987654211    11111111 11112268899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ||..||.+||+.||+|.++|+|+|+++..
T Consensus       242 FV~~CL~k~P~~RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  242 FVEACLDKNPEFRPSAKELLKHKFIKRAK  270 (467)
T ss_pred             HHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence            99999999999999999999999998744

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=9.3e-34  Score=243.26  Aligned_cols=166  Identities=31%  Similarity=0.507  Sum_probs=133.1

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++...+.         +.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ..
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~~~~~~~--~~  172 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGH--VKVTDFGFAKKVPD--RT  172 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCC--EEEeeccCceEcCC--Cc
Confidence            687755 89888876543         467889999999999999999999999988776  99999999875432  22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....|++.|+|||++.+..++ .++|||||||++|+|++|+.||.+.....    ....+.......|.  .++..+++|
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~i~~~~~~~p~--~~~~~~~~l  245 (329)
T PTZ00263        173 FTLCGTPEYLAPEVIQSKGHG-KAVDWWTMGVLLYEFIAGYPPFFDDTPFR----IYEKILAGRLKFPN--WFDGRARDL  245 (329)
T ss_pred             ceecCChhhcCHHHHcCCCCC-CcceeechHHHHHHHHcCCCCCCCCCHHH----HHHHHhcCCcCCCC--CCCHHHHHH
Confidence            345789999999999887765 55999999999999999999997754322    22333333333333  578999999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|++     +.++++||||.+.
T Consensus       246 i~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        246 VKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            99999999999997     7999999999864

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.5e-33  Score=241.86  Aligned_cols=168  Identities=34%  Similarity=0.528  Sum_probs=132.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        74 ~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DfG~~~~~~~~~~~  151 (328)
T cd05593          74 MEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGH--IKITDFGLCKEGITDAAT  151 (328)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCc--EEEecCcCCccCCCcccc
Confidence            677765 7877775443         3667899999999999999999999999987775  99999999875322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..+. .++|||||||++|+|++|+.||.......    ....+.......|  ..++.++.+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~Pf~~~~~~~----~~~~~~~~~~~~p--~~~~~~~~~  224 (328)
T cd05593         152 MKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEK----LFELILMEDIKFP--RTLSADAKS  224 (328)
T ss_pred             cccccCCcCccChhhhcCCCCC-ccCCccccchHHHHHhhCCCCCCCCCHHH----HHHHhccCCccCC--CCCCHHHHH
Confidence            2345699999999999877765 45999999999999999999997754322    2222222333333  368999999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|+     ++.++++||||...
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         225 LLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999999999997     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.1e-33  Score=240.50  Aligned_cols=169  Identities=31%  Similarity=0.525  Sum_probs=133.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        74 ~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~  151 (323)
T cd05595          74 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGAT  151 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCC--EEecccHHhccccCCCCc
Confidence            687765 8887776543         3567899999999999999999999999988765  999999998743222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....|++.|+|||++.+..+. .++|||||||++|+|++|+.||.........    ..+.......|  ..+++.+.+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~----~~~~~~~~~~p--~~~~~~~~~  224 (323)
T cd05595         152 MKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFP--RTLSPEAKS  224 (323)
T ss_pred             cccccCCcCcCCcccccCCCCC-chhchhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHhcCCCCCC--CCCCHHHHH
Confidence            2345699999999999887765 4599999999999999999999876543222    22222233333  368999999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHhcCcccCCCC
Q 024572          150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNL  178 (265)
Q Consensus       150 li~~~L~~dP~~R~-----s~~ell~h~~f~~~~  178 (265)
                      ||.+||..||.+|+     ++.++++|+||.+..
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         225 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             HHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence            99999999999998     899999999998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3.9e-33  Score=234.60  Aligned_cols=171  Identities=23%  Similarity=0.337  Sum_probs=127.7

Q ss_pred             CcccccchHHHHHH----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVSSLSEFVML----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~sL~~~~~~----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+.+.+.+..          ..++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......  
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~  156 (287)
T cd07848          79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDV--LKLCDFGFARNLSEGSNA  156 (287)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc--EEEeeccCcccccccccc
Confidence            67887765554433          224678899999999999999999999999987775  9999999987543222  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh---------------h
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA---------------V  133 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------~  133 (265)
                      ......+++.|+|||++.+..++ .++|+|||||++|+|++|+.||..................               .
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07848         157 NYTEYVATRWYRSPELLLGAPYG-KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH  235 (287)
T ss_pred             cccccccccccCCcHHHcCCCCC-CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence            12234689999999999887765 4599999999999999999999876543332222111000               0


Q ss_pred             cccCCC-----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          134 QYKIPD-----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       134 ~~~~~~-----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ....+.           ...++..+.+||.+||..||.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            000111           11367889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.5e-33  Score=242.87  Aligned_cols=166  Identities=31%  Similarity=0.505  Sum_probs=133.4

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++....         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++....  ..
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~--ikL~DFG~a~~~~~--~~  185 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGF--IKMTDFGFAKVVDT--RT  185 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC--EEEecCCCCeecCC--Cc
Confidence            78875 48999987654         3567899999999999999999999999987765  99999999875432  23


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....||+.|+|||++.+..++ .++|+|||||++|+|++|+.||........    ...+.......|  ..++..+.++
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~~~i~~~~~~~p--~~~~~~~~~l  258 (340)
T PTZ00426        186 YTLCGTPEYIAPEILLNVGHG-KAADWWTLGIFIYEILVGCPPFYANEPLLI----YQKILEGIIYFP--KFLDNNCKHL  258 (340)
T ss_pred             ceecCChhhcCHHHHhCCCCC-ccccccchhhHHHHHhcCCCCCCCCCHHHH----HHHHhcCCCCCC--CCCCHHHHHH
Confidence            345799999999999877665 459999999999999999999987654322    222333333333  3578999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |++||..||.+|+     ++.++++||||.+.
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            9999999999996     89999999999753

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=4.3e-33  Score=242.23  Aligned_cols=172  Identities=30%  Similarity=0.450  Sum_probs=130.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..++         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~--vkL~DFGla~~~~~~~~~  157 (363)
T cd05628          80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH--VKLSDFGLCTGLKKAHRT  157 (363)
T ss_pred             EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCC--EEEeeccCcccccccccc
Confidence            788865 8999887654         3567889999999999999999999999988765  9999999986432110  


Q ss_pred             ----------------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCC
Q 024572           69 ----------------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF  114 (265)
Q Consensus        69 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf  114 (265)
                                                        .....+||+.|+|||++.+..++. ++|||||||++|+|++|+.||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~-~~DvwSlGvil~ell~G~~Pf  236 (363)
T cd05628         158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNK-LCDWWSLGVIMYEMLIGYPPF  236 (363)
T ss_pred             cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCC-chhhhhhHHHHHHHHhCCCCC
Confidence                                              012346999999999998877764 599999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCC---CCCCHHHHhcCcccCCCC
Q 024572          115 EDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPS---RRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~---~R~s~~ell~h~~f~~~~  178 (265)
                      .+......+..+...  ......|....+++++++||.+|+. +|.   .||++.++++||||+...
T Consensus       237 ~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~  300 (363)
T cd05628         237 CSETPQETYKKVMNW--KETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD  300 (363)
T ss_pred             CCCCHHHHHHHHHcC--cCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence            876543333322211  1223344444678999999999775 444   468999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.6e-33  Score=238.34  Aligned_cols=169  Identities=32%  Similarity=0.534  Sum_probs=132.2

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++..++         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05620          75 MEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGH--IKIADFGMCKENVFGDNR  152 (316)
T ss_pred             ECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--EEeCccCCCeecccCCCc
Confidence            788765 8888876543         2567899999999999999999999999988775  99999999864322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..++ .++|||||||++|+|++|+.||........    ...+.......|.  .++.++++
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~el~~g~~Pf~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~  225 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYT-FSVDWWSFGVLLYEMLIGQSPFHGDDEDEL----FESIRVDTPHYPR--WITKESKD  225 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCC--CCCHHHHH
Confidence            3345689999999999887775 459999999999999999999987654322    2222222222332  57899999


Q ss_pred             HHHHhcccCCCCCCCH-HHHhcCcccCCCC
Q 024572          150 LLSRIFVANPSRRITI-KEIKSHPWFLKNL  178 (265)
Q Consensus       150 li~~~L~~dP~~R~s~-~ell~h~~f~~~~  178 (265)
                      ||.+||..||.+|+++ .++++||||+...
T Consensus       226 li~~~l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         226 ILEKLFERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             HHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence            9999999999999998 5889999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4.7e-33  Score=236.77  Aligned_cols=175  Identities=20%  Similarity=0.303  Sum_probs=132.5

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++...+          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... .
T Consensus        83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~  160 (309)
T cd07872          83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE--LKLADFGLARAKSVPTKT  160 (309)
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEECccccceecCCCccc
Confidence            6888888888776543          3567899999999999999999999999988765  9999999986433222 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------c
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------Q  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------~  134 (265)
                      .....+++.|+|||.+.+....+.++|||||||++|+|++|+.||...................               .
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
T cd07872         161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN  240 (309)
T ss_pred             cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence            2334678999999998765544566999999999999999999998766544333332211000               0


Q ss_pred             ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 ~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...+         ....++.++++||.+||..||.+|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence            0011         112468899999999999999999999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4.2e-33  Score=238.70  Aligned_cols=168  Identities=30%  Similarity=0.526  Sum_probs=132.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH--IKIADFGMCKENIFGGKT  157 (324)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC--EEEeecCcceecCCCCCc
Confidence            788765 8988876544         3567899999999999999999999999988765  99999999864322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..+. .++||||+||++|+|++|+.||.+......+    ..+.......  +..++..+.+
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~pf~~~~~~~~~----~~i~~~~~~~--~~~~~~~~~~  230 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQPPFDGEDEDELF----QSIMEHNVSY--PKSLSKEAVS  230 (324)
T ss_pred             eeeecCCccccChhhhcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCC--CCCCCHHHHH
Confidence            3345689999999999887765 4599999999999999999999876543322    2223333233  3368899999


Q ss_pred             HHHHhcccCCCCCCCH-----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI-----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~-----~ell~h~~f~~~  177 (265)
                      +|.+||..||.+|++.     .++++||||...
T Consensus       231 li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         231 ICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999999999986     899999999764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-33  Score=235.86  Aligned_cols=165  Identities=28%  Similarity=0.404  Sum_probs=126.9

Q ss_pred             hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC-----CCCcCCCCCccccccc-C-
Q 024572           15 EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-----KSTVGTPAYIAPEVLS-R-   87 (265)
Q Consensus        15 ~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~-----~~~~~~~~y~aPE~~~-~-   87 (265)
                      ..+++.++.+|.|||.+|.||||||+.||||+++|.  |||+|||.+.....+...     .++.||++|||||++. . 
T Consensus       129 a~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~--VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~  206 (516)
T KOG0582|consen  129 ATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGT--VKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL  206 (516)
T ss_pred             HHHHHHHHHHHHHHHhcCceecccccccEEEcCCCc--EEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcc
Confidence            345888899999999999999999999999999887  999999987543332211     4557999999999954 3 


Q ss_pred             CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh----cccCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 024572           88 REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV----QYKIPDYVHISQDCRNLLSRIFVANPSRRI  163 (265)
Q Consensus        88 ~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  163 (265)
                      .+|+ .|+||||||++..||.+|..||......+.+...++.....    .........++..++.+|..||.+||.+||
T Consensus       207 ~GYd-fKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRp  285 (516)
T KOG0582|consen  207 HGYD-FKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRP  285 (516)
T ss_pred             cCcc-chhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCC
Confidence            4555 45999999999999999999998876655444433321100    000111234677899999999999999999


Q ss_pred             CHHHHhcCcccCCCCChhh
Q 024572          164 TIKEIKSHPWFLKNLPREL  182 (265)
Q Consensus       164 s~~ell~h~~f~~~~~~~~  182 (265)
                      |+.++|+|+||++......
T Consensus       286 tAskLlkh~FFk~~k~~~~  304 (516)
T KOG0582|consen  286 TASKLLKHAFFKKAKSKEY  304 (516)
T ss_pred             CHHHHhccHHHhhccchhh
Confidence            9999999999998766543

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-33  Score=234.69  Aligned_cols=166  Identities=32%  Similarity=0.599  Sum_probs=148.0

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      |||..+ .|.||+..++.         .+||.+++.|||.++++|||||.+|||+|.+++  +||+|||++..+......
T Consensus       132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~N--iKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNN--IKIADFGLSNLYADKKFL  209 (668)
T ss_pred             EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCC--eeeeccchhhhhccccHH
Confidence            888877 89999998774         678999999999999999999999999999887  999999999877777777


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .++||++.|.+||++.+.+|.++.+|.||||++||.|+.|..||.+.+.    ..++.++....+..|.   -+.++.-|
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh----k~lvrQIs~GaYrEP~---~PSdA~gL  282 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH----KRLVRQISRGAYREPE---TPSDASGL  282 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH----HHHHHHhhcccccCCC---CCchHHHH
Confidence            8899999999999999999999999999999999999999999988654    4556666677776665   46688999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      |+.||..+|.+|.|+.+|..|=|++
T Consensus       283 IRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  283 IRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             HHHHHhcCcccchhHHHHhhhheee
Confidence            9999999999999999999997764

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.7e-33  Score=238.29  Aligned_cols=168  Identities=33%  Similarity=0.516  Sum_probs=133.7

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++...+.         +.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  156 (323)
T cd05584          79 LEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGH--VKLTDFGLCKESIHEGTV  156 (323)
T ss_pred             EeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC--EEEeeCcCCeecccCCCc
Confidence            677765 89888865543         567899999999999999999999999987765  999999998643222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....|++.|+|||++.+..+. .++|||||||++|+|++|+.||........    +..+.......|  ..+++.+.+
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~pf~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~  229 (323)
T cd05584         157 THTFCGTIEYMAPEILMRSGHG-KAVDWWSLGALMYDMLTGAPPFTAENRKKT----IDKILKGKLNLP--PYLTPEARD  229 (323)
T ss_pred             ccccCCCccccChhhccCCCCC-CcceecccHHHHHHHhcCCCCCCCCCHHHH----HHHHHcCCCCCC--CCCCHHHHH
Confidence            3345699999999999877665 459999999999999999999987654332    233333333333  357899999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      ||.+||..+|.+||     ++.++++||||...
T Consensus       230 li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         230 LLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999999999999     89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-33  Score=242.44  Aligned_cols=170  Identities=34%  Similarity=0.520  Sum_probs=134.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..++         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGH--IKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEeecCCCCccCcccCcc
Confidence            788754 8999887653         3667899999999999999999999999988776  9999999987543322  


Q ss_pred             ----------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh
Q 024572           69 ----------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP  120 (265)
Q Consensus        69 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~  120 (265)
                                                  ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~Pf~~~~~~  236 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYG-LECDWWSLGVILYEMLYGFPPFYSDTLQ  236 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCC-CceeeEecchhhhhhccCCCCCCCCCHH
Confidence                                        22344689999999999887765 4599999999999999999999886643


Q ss_pred             HHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHhcCcccCC
Q 024572          121 KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT-IKEIKSHPWFLK  176 (265)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-~~ell~h~~f~~  176 (265)
                      .....+...  ......|....+++.+.+||.+||. +|.+|++ +.++++||||+.
T Consensus       237 ~~~~~i~~~--~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         237 ETYNKIINW--KESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             HHHHHHhcc--CCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence            333222211  1233445444579999999999997 9999999 999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3.1e-33  Score=239.20  Aligned_cols=168  Identities=31%  Similarity=0.498  Sum_probs=133.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~  152 (321)
T cd05591          75 MEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGH--CKLADFGMCKEGILNGVT  152 (321)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEEeecccceecccCCcc
Confidence            788765 8887775443         3667899999999999999999999999988775  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....|++.|+|||++.+..+.. ++|||||||++|+|++|+.||........+    ..+.......|  ..++.++.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslG~il~el~tg~~Pf~~~~~~~~~----~~i~~~~~~~p--~~~~~~~~~  225 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGP-SVDWWALGVLMYEMMAGQPPFEADNEDDLF----ESILHDDVLYP--VWLSKEAVS  225 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCC-ccceechhHHHHHHhcCCCCCCCCCHHHHH----HHHHcCCCCCC--CCCCHHHHH
Confidence            33456899999999998877654 499999999999999999999876543332    22333333333  357899999


Q ss_pred             HHHHhcccCCCCCC-------CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI-------TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~-------s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|+       ++.++++||||...
T Consensus       226 ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         226 ILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             HHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            99999999999999       89999999999654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-33  Score=242.98  Aligned_cols=170  Identities=29%  Similarity=0.441  Sum_probs=133.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+|+.++.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~--~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          75 TDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGH--IALCDFGLSKANLTDNKT  152 (330)
T ss_pred             EcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--EEEecCCcCcCCCCCCCC
Confidence            677755 8887776543         3678999999999999999999999999988775  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||..|+|||++.+....+.++|||||||++|+|++|+.||.......    ....+.......+. ..++..+.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~----~~~~i~~~~~~~~~-~~~~~~~~~  227 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ----MYRNIAFGKVRFPK-NVLSDEGRQ  227 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH----HHHHHHcCCCCCCC-ccCCHHHHH
Confidence            3345799999999998765534556999999999999999999998754432    22333333333333 247899999


Q ss_pred             HHHHhcccCCCCCC----CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI----TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~----s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||    ++.++++||||...
T Consensus       228 li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         228 FVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             HHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            99999999999998    79999999999764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.8e-33  Score=243.13  Aligned_cols=173  Identities=34%  Similarity=0.500  Sum_probs=134.5

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--~   69 (265)
                      ||++.+ +|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||++.......  .
T Consensus       122 ~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~--~kL~DfG~~~~~~~~~~~~  199 (370)
T cd05596         122 MEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMDANGMVR  199 (370)
T ss_pred             EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCC--EEEEeccceeeccCCCccc
Confidence            788854 8988876533        3567899999999999999999999999988776  9999999987543222  2


Q ss_pred             CCCCcCCCCCcccccccCCc---CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PKSTVGTPAYIAPEVLSRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~---~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ....+||+.|+|||++.+..   ..+.++|||||||++|+|++|+.||........+..+...  ......|....++..
T Consensus       200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~  277 (370)
T cd05596         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH--KNSLTFPDDIEISKQ  277 (370)
T ss_pred             CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--CCcCCCCCcCCCCHH
Confidence            23457999999999987532   2345699999999999999999999876654333332211  122334555568999


Q ss_pred             HHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      +++||.+||..+|.+  |+|+.++++||||+..
T Consensus       278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            999999999999988  9999999999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=6.1e-33  Score=242.04  Aligned_cols=175  Identities=25%  Similarity=0.334  Sum_probs=132.1

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--C
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--~   69 (265)
                      ||++.++|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  .
T Consensus        83 ~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~--~kL~Dfg~a~~~~~~~~~~  160 (372)
T cd07853          83 TELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV--LKICDFGLARVEEPDESKH  160 (372)
T ss_pred             eeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCC--EEeccccceeecccCcccc
Confidence            6777778877765433         3678999999999999999999999999988775  9999999987543221  2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHH-------------------H
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISR-------------------I  130 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-------------------~  130 (265)
                      .....+++.|+|||++.+....+.++||||+||++|+|++|+.||.+......+..+...                   +
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~  240 (372)
T cd07853         161 MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI  240 (372)
T ss_pred             CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHH
Confidence            223457889999999987554456699999999999999999999876554433222211                   0


Q ss_pred             hhhcccCC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          131 MAVQYKIP-------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       131 ~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .......+       .....++.+.+||.+||..||.+|||+.++++||||...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            00011111       122457889999999999999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-33  Score=237.22  Aligned_cols=164  Identities=31%  Similarity=0.414  Sum_probs=130.0

Q ss_pred             Cccccc-chHHHHHHh--c---------cccchHHHHHhhhhcC-ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLE--G---------SVKMKPDIFFSSLSQQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--~---------~~~~i~~~l~~lH~~~-ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      |||..+ +|.+++..+  .         ++-+|+.++.|||+++ ||||||||+|||++.+. .++||+|||+++.....
T Consensus       119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KTLKIADFGLSREKVIS  197 (362)
T ss_pred             EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CEEEECCCccceeeccc
Confidence            677766 999999872  2         2445788899999999 99999999999999886 24999999999755443


Q ss_pred             -CCCCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           68 -SRPKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                       ...+...||..|||||++.+  ..|+ .++||||||+++|+|+||+.||.......    ....+.....+.+.+..++
T Consensus       198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~-~K~DvySFgIvlWEl~t~~~Pf~~~~~~~----~~~~v~~~~~Rp~~p~~~~  272 (362)
T KOG0192|consen  198 KTSMTSVAGTYRWMAPEVLRGEKSPYT-EKSDVYSFGIVLWELLTGEIPFEDLAPVQ----VASAVVVGGLRPPIPKECP  272 (362)
T ss_pred             cccccCCCCCccccChhhhcCCCCcCC-ccchhhhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhcCCCCCCCccCC
Confidence             33344689999999999994  4665 45999999999999999999999876522    2222333333444444589


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+..||.+||..||.+||++.+++.
T Consensus       273 ~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  273 PHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            99999999999999999999999875

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.4e-33  Score=239.88  Aligned_cols=173  Identities=25%  Similarity=0.346  Sum_probs=125.5

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++..+.  +||+|||+++........
T Consensus       136 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~  213 (357)
T PHA03209        136 LPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQ--VCIGDLGAAQFPVVAPAF  213 (357)
T ss_pred             EEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEEecCccccccccCccc
Confidence            5677778888776432          3678899999999999999999999999987775  999999998744333333


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH----------HHHHHHHHHhhhcccCC--
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK----------NFRKTISRIMAVQYKIP--  138 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~----------~~~~~~~~~~~~~~~~~--  138 (265)
                      ....||..|+|||++.+..+.. ++|||||||++|+|+++..++.......          .+...+.........++  
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~-~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  292 (357)
T PHA03209        214 LGLAGTVETNAPEVLARDKYNS-KADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD  292 (357)
T ss_pred             ccccccccccCCeecCCCCCCc-hhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence            4456899999999998877754 5999999999999998655543321111          11111111100000000  


Q ss_pred             --------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          139 --------------------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       139 --------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                                ....++.++.+||.+||..||.+|||+.++++||||++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                      01135667888999999999999999999999999975

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-32  Score=229.89  Aligned_cols=171  Identities=29%  Similarity=0.449  Sum_probs=140.8

Q ss_pred             Cccccc-chHHHHHHhcc-----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC--
Q 024572            1 MQLGVS-SLSEFVMLEGS-----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL--   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~-----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~--   66 (265)
                      ||||.+ +|.-+.+++.-           +..++-||.|||-.|||+|||||+||||..+|.  |.|+||.++.....  
T Consensus       156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH--IMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH--IMLSDFDLSLRCPVSP  233 (459)
T ss_pred             EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc--EEeeeccccccCCCCC
Confidence            899988 89988887653           444677899999999999999999999988886  99999988631100  


Q ss_pred             -------------------------------C------------------------CCCCCCcCCCCCcccccccCCcCC
Q 024572           67 -------------------------------H------------------------SRPKSTVGTPAYIAPEVLSRREYD   91 (265)
Q Consensus        67 -------------------------------~------------------------~~~~~~~~~~~y~aPE~~~~~~~~   91 (265)
                                                     .                        .....++||-.|+|||++.+.+..
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                           0                        011234688899999999998875


Q ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHH
Q 024572           92 GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT----IKE  167 (265)
Q Consensus        92 ~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~e  167 (265)
                       .++|+|+|||++|||+.|..||.+.+....+.+    +......+|....++..+++||+++|.+||.+|..    +.+
T Consensus       314 -sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N----Iv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e  388 (459)
T KOG0610|consen  314 -SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN----IVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE  388 (459)
T ss_pred             -chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH----HhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence             559999999999999999999999887655554    44556677777788899999999999999999997    999


Q ss_pred             HhcCcccCCCC
Q 024572          168 IKSHPWFLKNL  178 (265)
Q Consensus       168 ll~h~~f~~~~  178 (265)
                      |.+||||+...
T Consensus       389 IK~HpFF~gVn  399 (459)
T KOG0610|consen  389 IKRHPFFEGVN  399 (459)
T ss_pred             hhcCccccCCC
Confidence            99999998643

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-32  Score=241.45  Aligned_cols=173  Identities=19%  Similarity=0.271  Sum_probs=126.4

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--CC
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--~~   69 (265)
                      ||++.++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.....  ..
T Consensus       162 ~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~--vkL~DFG~a~~~~~~~~~~  239 (391)
T PHA03212        162 LPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD--VCLGDFGAACFPVDINANK  239 (391)
T ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCC--EEEEeCCcccccccccccc
Confidence            5667778877775432         4677899999999999999999999999987765  999999998643221  12


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC-------hHHHHHHHHHH------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED-------PKNFRKTISRI------------  130 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~------------  130 (265)
                      .....||+.|+|||++.+..+. .++|||||||++|+|++|+.||.....       ...+..++...            
T Consensus       240 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~  318 (391)
T PHA03212        240 YYGWAGTIATNAPELLARDPYG-PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ  318 (391)
T ss_pred             cccccCccCCCChhhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence            2345799999999999887765 559999999999999999988754321       11111111110            


Q ss_pred             ----------hhhcccCC----C---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          131 ----------MAVQYKIP----D---YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       131 ----------~~~~~~~~----~---~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                .......+    .   ...++.++.+||.+||..||.+|||+.++|+||||+.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence                      00000000    0   1134668999999999999999999999999999975

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=5.9e-33  Score=238.28  Aligned_cols=171  Identities=27%  Similarity=0.448  Sum_probs=131.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~--~kL~Dfg~~~~~~~~~~~  152 (329)
T cd05588          75 IEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGH--IKLTDYGMCKEGIRPGDT  152 (329)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--EEECcCccccccccCCCc
Confidence            688765 8888776543         3567899999999999999999999999988765  99999999874322 223


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK-----NFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ....+||+.|+|||++.+..++ .++|+|||||++|+|++|+.||.......     ........+.......|  ..++
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~  229 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP--RSLS  229 (329)
T ss_pred             cccccCCccccCHHHHcCCCCC-CccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC--CCCC
Confidence            3345799999999999887765 45999999999999999999996422111     11112222333333333  3678


Q ss_pred             HHHHHHHHHhcccCCCCCCC------HHHHhcCcccCC
Q 024572          145 QDCRNLLSRIFVANPSRRIT------IKEIKSHPWFLK  176 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s------~~ell~h~~f~~  176 (265)
                      ..+.++|.+||..||.+|++      +.++++||||..
T Consensus       230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            99999999999999999997      789999999965

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.7e-33  Score=241.15  Aligned_cols=169  Identities=32%  Similarity=0.513  Sum_probs=133.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~   68 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||+ +||+||||||+|||++.++.  +||+|||+++.... ..
T Consensus        74 ~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~--~kL~Dfg~~~~~~~~~~  151 (325)
T cd05594          74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH--IKITDFGLCKEGIKDGA  151 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCC--EEEecCCCCeecCCCCc
Confidence            788765 8887776543         35678999999997 89999999999999988775  99999999874322 22


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......|++.|+|||++.+..+. .++|||||||++|+|++|+.||........    ...+.......|  ..+++++.
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tG~~Pf~~~~~~~~----~~~i~~~~~~~p--~~~~~~~~  224 (325)
T cd05594         152 TMKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILMEEIRFP--RTLSPEAK  224 (325)
T ss_pred             ccccccCCcccCCHHHHccCCCC-CccccccccceeeeeccCCCCCCCCCHHHH----HHHHhcCCCCCC--CCCCHHHH
Confidence            22345699999999999887765 459999999999999999999987554322    222222233333  36889999


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHhcCcccCCCC
Q 024572          149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKNL  178 (265)
Q Consensus       149 ~li~~~L~~dP~~R~-----s~~ell~h~~f~~~~  178 (265)
                      +||.+||..||.+|+     ++.++++||||....
T Consensus       225 ~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~  259 (325)
T cd05594         225 SLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV  259 (325)
T ss_pred             HHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence            999999999999997     899999999998644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.4e-32  Score=233.74  Aligned_cols=174  Identities=24%  Similarity=0.385  Sum_probs=130.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++ +|+||||||+|||++.++.  +||+|||+++.... ..
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~-~~  158 (331)
T cd06649          82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLID-SM  158 (331)
T ss_pred             eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc--EEEccCcccccccc-cc
Confidence            687766 8999887543         356788999999986 6999999999999988776  99999999875432 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH---------------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS---------------------  128 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~---------------------  128 (265)
                      .....++..|+|||++.+..++ .++|||||||++|+|++|+.||....... +...+.                     
T Consensus       159 ~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (331)
T cd06649         159 ANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVELAIGRYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRPRPP  236 (331)
T ss_pred             cccCCCCcCcCCHhHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhcccccccccCCccccCcccccc
Confidence            3345689999999999887765 45999999999999999999996543211 111110                     


Q ss_pred             ----------------------HHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          129 ----------------------RIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       129 ----------------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                                            .+............++.++++||.+||..||++|||+.++++||||+....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~  309 (331)
T cd06649         237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV  309 (331)
T ss_pred             cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence                                  000000000011246789999999999999999999999999999986543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=8.6e-33  Score=232.05  Aligned_cols=172  Identities=25%  Similarity=0.360  Sum_probs=131.7

Q ss_pred             Cccccc-chHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..             ..++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.....
T Consensus        72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~  149 (280)
T cd05608          72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGN--VRISDLGLAVELKD  149 (280)
T ss_pred             EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEeeCccceecCC
Confidence            677754 78776642             123677899999999999999999999999987765  99999999865433


Q ss_pred             CCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ... .....|++.|+|||++.+..++ .++|+|||||++|+|++|+.||...............+....  ...+..++.
T Consensus       150 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  226 (280)
T cd05608         150 GQSKTKGYAGTPGFMAPELLQGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--VTYPDKFSP  226 (280)
T ss_pred             CCccccccCCCcCccCHHHhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--CCCcccCCH
Confidence            222 2334689999999999887775 459999999999999999999986543322222222222222  222336889


Q ss_pred             HHHHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      .+.+++.+||..||.+||     +++++++||||+..
T Consensus       227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         227 ASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             HHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence            999999999999999999     88999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-33  Score=239.37  Aligned_cols=170  Identities=29%  Similarity=0.463  Sum_probs=133.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ..
T Consensus        80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kL~Dfg~a~~~~~--~~  155 (333)
T cd05600          80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGH--IKLTDFGLSKGIVT--YA  155 (333)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC--EEEEeCcCCccccc--cc
Confidence            688755 8999886543         3567899999999999999999999999988765  99999999875433  33


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCC----CCCCHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY----VHISQD  146 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  146 (265)
                      ....|++.|+|||++.+..++ .++|||||||++|+|++|..||........+.......  .....|..    ..++.+
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~s~~  232 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGKGYD-FTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWK--ETLQRPVYDDPRFNLSDE  232 (333)
T ss_pred             CCcccCccccChhHhcCCCCC-CccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcc--ccccCCCCCccccccCHH
Confidence            456799999999999887765 45999999999999999999998765443333222111  11112221    256899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +.+||.+||..+|.+||++.++++||||...
T Consensus       233 ~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         233 AWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            9999999999999999999999999999753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=7.3e-33  Score=237.12  Aligned_cols=168  Identities=32%  Similarity=0.512  Sum_probs=133.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~--~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENMWDGVT  157 (323)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCc--EEEccCCCceecCCCCCc
Confidence            677754 8888876543         3667899999999999999999999999988776  99999999874332 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..++ .++|||||||++|+|++|+.||........    ...+.......|  ..++.++.+
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~Pf~~~~~~~~----~~~i~~~~~~~p--~~~s~~~~~  230 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHNVAYP--KSMSKEAVA  230 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCC-CccchhchhHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCC--CcCCHHHHH
Confidence            3345689999999999887775 459999999999999999999987654332    233333333333  368999999


Q ss_pred             HHHHhcccCCCCCCCH-----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI-----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~-----~ell~h~~f~~~  177 (265)
                      |+.+||..+|.+|+++     .++++||||+..
T Consensus       231 li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         231 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             HHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999999999984     899999999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=8.9e-33  Score=236.12  Aligned_cols=168  Identities=33%  Similarity=0.536  Sum_probs=132.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~  152 (318)
T cd05570          75 MEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGH--IKIADFGMCKEGILGGVT  152 (318)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCc--EEecccCCCeecCcCCCc
Confidence            688755 8888776553         3567899999999999999999999999988775  99999999864322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+++..|+|||++.+..++. ++|+|||||++|+|++|+.||........    ...+.......|  ..++..+.+
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~-~~DiwslGvil~~l~~G~~pf~~~~~~~~----~~~i~~~~~~~~--~~~~~~~~~  225 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGP-AVDWWALGVLLYEMLAGQSPFEGDDEDEL----FQSILEDEVRYP--RWLSKEAKS  225 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCc-chhhhhHHHHHHHHhhCCCCCCCCCHHHH----HHHHHcCCCCCC--CcCCHHHHH
Confidence            23446899999999998877754 59999999999999999999977553322    222223333333  357899999


Q ss_pred             HHHHhcccCCCCCCCH-----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI-----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~-----~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|||+     .++++||||+..
T Consensus       226 li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         226 ILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999999999999     999999999764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.2e-32  Score=238.61  Aligned_cols=175  Identities=26%  Similarity=0.439  Sum_probs=129.6

Q ss_pred             Cccccc-chHHH-----HHHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CCCCC
Q 024572            1 MQLGVS-SLSEF-----VMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKST   73 (265)
Q Consensus         1 me~~~~-sL~~~-----~~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~   73 (265)
                      ||++.+ +|.+.     .....++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...... .....
T Consensus       151 ~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--~kL~DfG~~~~~~~~~~~~~~~  228 (353)
T PLN00034        151 LEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN--VKIADFGVSRILAQTMDPCNSS  228 (353)
T ss_pred             EecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--EEEcccccceeccccccccccc
Confidence            566655 55432     223346788999999999999999999999999988765  9999999987543222 22345


Q ss_pred             cCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           74 VGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        74 ~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .|+..|+|||++..    ..+.+.++|||||||++|+|++|+.||...... .+......+. ..........++..+++
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l~~  306 (353)
T PLN00034        229 VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-DWASLMCAIC-MSQPPEAPATASREFRH  306 (353)
T ss_pred             ccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-cHHHHHHHHh-ccCCCCCCCccCHHHHH
Confidence            78999999998753    233445699999999999999999999743322 1222222211 11122233467899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      ||.+||..||++|||+.++++||||.+...
T Consensus       307 li~~~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        307 FISCCLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             HHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence            999999999999999999999999987644

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8e-33  Score=236.21  Aligned_cols=168  Identities=32%  Similarity=0.542  Sum_probs=131.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        75 ~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~--~kL~Dfg~a~~~~~~~~~  152 (316)
T cd05592          75 MEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGH--IKIADFGMCKENMNGEGK  152 (316)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCC--EEEccCcCCeECCCCCCc
Confidence            788754 8888876543         3677899999999999999999999999987765  999999998753322 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+......+    ..+.......  +..++.++.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~~~~~~--~~~~~~~~~~  225 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYN-ESVDWWSFGVLLYEMLIGQSPFHGEDEDELF----DSILNDRPHF--PRWISKEAKD  225 (316)
T ss_pred             cccccCCccccCHHHHcCCCCC-CcccchhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCC--CCCCCHHHHH
Confidence            3345689999999999887765 4499999999999999999999876543222    2222222222  3357899999


Q ss_pred             HHHHhcccCCCCCCCHH-HHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIK-EIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~-ell~h~~f~~~  177 (265)
                      ||.+||..+|.+||++. ++++||||...
T Consensus       226 ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         226 CLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             HHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence            99999999999999864 88899999754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-33  Score=219.73  Aligned_cols=153  Identities=25%  Similarity=0.486  Sum_probs=123.3

Q ss_pred             hHHHHHhhh-hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccC---CcCCCchHh
Q 024572           21 KPDIFFSSL-SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR---REYDGKLAD   96 (265)
Q Consensus        21 i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~D   96 (265)
                      +..+|.||. .+||+|||+||+|||+|..|.  +||||||++.............|.+.|||||.+.-   ..|+-. +|
T Consensus       200 ~v~AL~YLKeKH~viHRDvKPSNILlDe~Gn--iKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiR-aD  276 (391)
T KOG0983|consen  200 IVKALYYLKEKHGVIHRDVKPSNILLDERGN--IKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIR-AD  276 (391)
T ss_pred             HHHHHHHHHHhcceeecccCccceEEccCCC--EEeecccccceeecccccccccCCccccCccccCCCCCCccchh-hh
Confidence            566777876 789999999999999998887  99999999987666666666789999999999854   345544 89


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh-hcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572           97 VWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA-VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus        97 iwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      |||||+.+++|.||+.||.+....-..   +..+.. ....++....+++++++|+..||.+|+.+||...++|+|||++
T Consensus       277 VWSlGITlveLaTg~yPy~~c~tdFe~---ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~  353 (391)
T KOG0983|consen  277 VWSLGITLVELATGQYPYKGCKTDFEV---LTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK  353 (391)
T ss_pred             hhhhccchhhhhcccCCCCCCCccHHH---HHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence            999999999999999999987654322   222222 2233444556899999999999999999999999999999997


Q ss_pred             CCCC
Q 024572          176 KNLP  179 (265)
Q Consensus       176 ~~~~  179 (265)
                      ..-.
T Consensus       354 ~ye~  357 (391)
T KOG0983|consen  354 RYET  357 (391)
T ss_pred             ecch
Confidence            6543

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.1e-32  Score=236.18  Aligned_cols=168  Identities=30%  Similarity=0.531  Sum_probs=131.8

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCCC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~~   70 (265)
                      ||++.+ +|..++...        .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.... ....
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGF--VKIADFGLCKEGMGFGDRT  158 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCc--EEeCcccCCccCCCCCCcc
Confidence            677765 776665432        24677899999999999999999999999988775  99999999874322 2223


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+|++.|+|||.+.+..+. .++|||||||++|+|++|+.||.+.......    ..+.......|  ..++..+.++
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~G~~pf~~~~~~~~~----~~i~~~~~~~p--~~~~~~~~~l  231 (324)
T cd05589         159 STFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIYEMLVGESPFPGDDEEEVF----DSIVNDEVRYP--RFLSREAISI  231 (324)
T ss_pred             cccccCccccCHhHhcCCCCC-cccchhhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCC--CCCCHHHHHH
Confidence            345799999999999887765 4599999999999999999999876543322    22223333333  3578999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+||     ++.++++||||+..
T Consensus       232 i~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         232 MRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            9999999999999     69999999999764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.1e-32  Score=230.95  Aligned_cols=172  Identities=22%  Similarity=0.355  Sum_probs=132.1

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++.......
T Consensus        72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~--~~l~Dfg~~~~~~~~~  149 (277)
T cd05607          72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGN--CRLSDLGLAVELKDGK  149 (277)
T ss_pred             EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCC--EEEeeceeeeecCCCc
Confidence            677754 8887775432           3567899999999999999999999999988765  9999999987554433


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||++.+..++ .++|+||+||++|+|++|+.||....................... ....++.+++
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  227 (277)
T cd05607         150 TITQRAGTNGYMAPEILKEEPYS-YPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESK  227 (277)
T ss_pred             eeeccCCCCCccCHHHHccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHH
Confidence            33445689999999999887765 459999999999999999999976543322223333322222221 1235789999


Q ss_pred             HHHHHhcccCCCCCCCH----HHHhcCcccCC
Q 024572          149 NLLSRIFVANPSRRITI----KEIKSHPWFLK  176 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~----~ell~h~~f~~  176 (265)
                      +||.+||..||.+||++    .+++.|+||+.
T Consensus       228 ~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         228 DICRLFLAKKPEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             HHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence            99999999999999999    67889999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=8e-33  Score=237.46  Aligned_cols=172  Identities=27%  Similarity=0.430  Sum_probs=130.6

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.... ...
T Consensus        75 ~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~--~kL~DfG~~~~~~~~~~~  152 (329)
T cd05618          75 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDT  152 (329)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCC--EEEeeCCccccccCCCCc
Confidence            677765 7877765443         3567899999999999999999999999988776  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-----KNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .....||..|+|||++.+..+.. ++|+|||||++|+|++|+.||......     .........+.......|  ..++
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~~~~  229 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGF-SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSLS  229 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCC-ccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC--CCCC
Confidence            33457899999999998877654 599999999999999999999532111     111112222233333333  3678


Q ss_pred             HHHHHHHHHhcccCCCCCCC------HHHHhcCcccCCC
Q 024572          145 QDCRNLLSRIFVANPSRRIT------IKEIKSHPWFLKN  177 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s------~~ell~h~~f~~~  177 (265)
                      ..+.+||.+||..||.+|++      +.++++||||+..
T Consensus       230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            99999999999999999998      5799999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.2e-32  Score=235.07  Aligned_cols=168  Identities=33%  Similarity=0.532  Sum_probs=131.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        75 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05619          75 MEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGH--IKIADFGMCKENMLGDAK  152 (316)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC--EEEccCCcceECCCCCCc
Confidence            688754 8988887543         3567899999999999999999999999988775  999999998743222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....||..|+|||++.+..++ .++|+||+||++|+|++|+.||........    ...+.......|  ..++.++++
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~G~~pf~~~~~~~~----~~~i~~~~~~~~--~~~~~~~~~  225 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYN-TSVDWWSFGVLLYEMLIGQSPFHGHDEEEL----FQSIRMDNPCYP--RWLTREAKD  225 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCC-chhhhhhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCC--ccCCHHHHH
Confidence            2345689999999999887765 459999999999999999999987553222    222222222222  257899999


Q ss_pred             HHHHhcccCCCCCCCHH-HHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIK-EIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~-ell~h~~f~~~  177 (265)
                      ||.+||..||.+||++. ++++||||+..
T Consensus       226 li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         226 ILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             HHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence            99999999999999996 89999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=5.6e-33  Score=237.82  Aligned_cols=168  Identities=30%  Similarity=0.454  Sum_probs=132.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~--~kl~Dfg~~~~~~~~~~~  152 (323)
T cd05575          75 LDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGH--VVLTDFGLCKEGIEHSKT  152 (323)
T ss_pred             EcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc--EEEeccCCCcccccCCCc
Confidence            677766 8888776543         3678899999999999999999999999988775  999999998743222 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..++ .++|||||||++|+|++|+.||........    ...+.......  ...++..+.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~--~~~~~~~~~~  225 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRDTAEM----YDNILNKPLRL--KPNISVSARH  225 (323)
T ss_pred             cccccCChhhcChhhhcCCCCC-ccccccccchhhhhhhcCCCCCCCCCHHHH----HHHHHcCCCCC--CCCCCHHHHH
Confidence            3345689999999999887765 459999999999999999999987544322    22222222222  2357899999


Q ss_pred             HHHHhcccCCCCCCCH----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~----~ell~h~~f~~~  177 (265)
                      +|.+||..||.+||++    .++++||||...
T Consensus       226 li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         226 LLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             HHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            9999999999999987    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=5.8e-33  Score=236.75  Aligned_cols=174  Identities=22%  Similarity=0.304  Sum_probs=123.2

Q ss_pred             CcccccchHHHHHH------------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCC--CCCcEEEeccCC
Q 024572            1 MQLGVSSLSEFVML------------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGS--PAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~~sL~~~~~~------------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~   60 (265)
                      ||+++++|.+++..                  ..++.+++.++.|||++||+||||||+|||+..+  ..+.+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867          79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            57778887777642                  2346688999999999999999999999999432  223599999999


Q ss_pred             cccCCCCC----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---------HHHHHHH
Q 024572           61 SKSSLLHS----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---------KNFRKTI  127 (265)
Q Consensus        61 a~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---------~~~~~~~  127 (265)
                      ++......    ......+|+.|+|||++.+....+.++|||||||++|+|++|++||......         .......
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~  238 (317)
T cd07867         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF  238 (317)
T ss_pred             eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence            97543321    1223468899999999987554456699999999999999999999754321         1111111


Q ss_pred             HHHh------------------------hhccc--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          128 SRIM------------------------AVQYK--------IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       128 ~~~~------------------------~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ....                        .....        .......+..+.+||.+||..||.+|||+.++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0000                        00000        00011235668899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-32  Score=240.23  Aligned_cols=174  Identities=25%  Similarity=0.320  Sum_probs=130.3

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||++.++|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......  
T Consensus       165 ~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~--~~l~DfG~a~~~~~~~~~~  242 (392)
T PHA03207        165 MPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN--AVLGDFGAACKLDAHPDTP  242 (392)
T ss_pred             ehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC--EEEccCccccccCcccccc
Confidence            6778888888875432         3667899999999999999999999999988775  99999999865433222  


Q ss_pred             -CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHHHhhhc-----------
Q 024572           70 -PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---KNFRKTISRIMAVQ-----------  134 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~-----------  134 (265)
                       .....||+.|+|||++.+..++. ++|||||||++|+|++|+.||.+....   ..+..++..+....           
T Consensus       243 ~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~  321 (392)
T PHA03207        243 QCYGWSGTLETNSPELLALDPYCA-KTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL  321 (392)
T ss_pred             cccccccccCccCHhHhcCCCCCc-hhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence             22346899999999998877754 499999999999999999999765432   12222221111000           


Q ss_pred             --------------ccCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 --------------YKIPD---YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 --------------~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                    +..+.   ...++.++.+||.+||..||.+|||+.++++||||.+.
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence                          00110   01346788999999999999999999999999999764

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.1e-32  Score=236.33  Aligned_cols=172  Identities=28%  Similarity=0.418  Sum_probs=131.6

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~  152 (327)
T cd05617          75 IEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGH--IKLTDYGMCKEGLGPGDT  152 (327)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCC--EEEeccccceeccCCCCc
Confidence            678755 8887776443         4677899999999999999999999999988776  99999999874322 223


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---KNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ....+|++.|+|||++.+..++ .++|||||||++|+|++|+.||......   .........+.......|  ..++..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~  229 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYG-FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP--RFLSVK  229 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCC-chheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC--CCCCHH
Confidence            3445799999999999887775 4599999999999999999999643211   111112222222233333  357899


Q ss_pred             HHHHHHHhcccCCCCCCC------HHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSRRIT------IKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s------~~ell~h~~f~~~  177 (265)
                      +.++|.+||..||.+|++      +.++++||||+..
T Consensus       230 ~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         230 ASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            999999999999999998      5799999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-32  Score=230.12  Aligned_cols=172  Identities=26%  Similarity=0.377  Sum_probs=133.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||+++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH--IRISDLGLAVEIPEGE  156 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC--EEEeeCCCceecCCCC
Confidence            677764 8887775432           2567889999999999999999999999987765  9999999987654333


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||++.+..++. ++|+||+||++|+|++|+.||.+.............+.....  ..+..++..+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~-~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  233 (285)
T cd05605         157 TIRGRVGTVGYMAPEVVKNERYTF-SPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE--EYSEKFSEAAR  233 (285)
T ss_pred             ccccccCCCCccCcHHhcCCCCCc-cccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc--ccCcccCHHHH
Confidence            334457899999999998776654 489999999999999999999876543333333333222222  22235789999


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      +||.+||..||.+||     ++.++++||||...
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         234 SICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             HHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence            999999999999999     89999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.6e-33  Score=240.36  Aligned_cols=171  Identities=35%  Similarity=0.534  Sum_probs=132.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~  157 (364)
T cd05599          80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGH--IKLSDFGLCTGLKKSHRT  157 (364)
T ss_pred             ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--EEEeecccceeccccccc
Confidence            788855 8999887654         3667899999999999999999999999988776  9999999986432111  


Q ss_pred             -------------------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCC
Q 024572           69 -------------------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA  111 (265)
Q Consensus        69 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~  111 (265)
                                                           .....+||+.|+|||++.+..+. .++|||||||++|+|++|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~~G~  236 (364)
T cd05599         158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYN-KECDWWSLGVIMYEMLVGY  236 (364)
T ss_pred             cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCC-CeeeeecchhHHHHhhcCC
Confidence                                                 01124689999999999887775 4599999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCCC
Q 024572          112 YPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT---IKEIKSHPWFLKN  177 (265)
Q Consensus       112 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s---~~ell~h~~f~~~  177 (265)
                      .||...............  ......|....+++.+++||.+||. +|.+|++   +.++++||||+..
T Consensus       237 ~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         237 PPFCSDNPQETYRKIINW--KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CCCCCCCHHHHHHHHHcC--CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            999876543332222211  1122334444678999999999996 9999998   9999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=1.5e-32  Score=214.46  Aligned_cols=150  Identities=38%  Similarity=0.657  Sum_probs=132.1

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhH
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADV   97 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di   97 (265)
                      ++|++.++.|+|.++|+||||||+|+|++..+.  +||+|||.+.... .....+.|||.-|.+||...+..++.. +|+
T Consensus       130 i~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~--lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~-Vd~  205 (281)
T KOG0580|consen  130 IKQLANALLYCHLKRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKF-VDL  205 (281)
T ss_pred             HHHHHHHHHHhccCCcccCCCCHHHhccCCCCC--eeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccch-hhH
Confidence            788999999999999999999999999988876  9999999987655 556677899999999999999888755 999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572           98 WSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus        98 wslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |++|++.|+++.|.+||.....    ....+++......+|  ..++.++++||.+||.++|.+|.+..+++.|||...+
T Consensus       206 w~lgvl~yeflvg~ppFes~~~----~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  206 WSLGVLCYEFLVGLPPFESQSH----SETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             HHHHHHHHHHHhcCCchhhhhh----HHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence            9999999999999999988664    445555666666666  4799999999999999999999999999999998653

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.98  E-value=3.5e-32  Score=230.56  Aligned_cols=175  Identities=22%  Similarity=0.316  Sum_probs=131.8

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... .
T Consensus        83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~  160 (301)
T cd07873          83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKT  160 (301)
T ss_pred             EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCc--EEECcCcchhccCCCCCc
Confidence            6888888888876532          3567899999999999999999999999988765  9999999986433222 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------c
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------Q  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------~  134 (265)
                      .....++..|+|||.+.+....+.++|||||||++|+|++|+.||...................               .
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS  240 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence            2234578899999998765544566999999999999999999998765433332222111000               0


Q ss_pred             ccCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 YKIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 ~~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...+.         ...+++.+++||.+||..||.+|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            01111         12468889999999999999999999999999999653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.98  E-value=4.3e-33  Score=239.17  Aligned_cols=172  Identities=28%  Similarity=0.440  Sum_probs=132.8

Q ss_pred             Ccccc-cchHHHHHHh-c---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE-G---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++... .         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||++........
T Consensus        80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~--~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGH--IKLADFGSAARLTANKM  157 (330)
T ss_pred             ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCC--EEeccCCCCeECCCCCc
Confidence            78874 4899988765 1         3567899999999999999999999999987775  99999999875433222


Q ss_pred             --CCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           70 --PKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                        .....+|+.|+|||++..     ....+.++|||||||++|+|++|+.||........+..+...  ......|....
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~  235 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF--QRFLKFPEDPK  235 (330)
T ss_pred             eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC--CCccCCCCCCC
Confidence              223468999999999863     222345599999999999999999999876554433332221  11123444446


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++..+.+||.+||. +|.+|||+.++++||||...
T Consensus       236 ~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         236 VSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             CCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            89999999999997 99999999999999999763

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.98  E-value=1.2e-32  Score=235.92  Aligned_cols=168  Identities=30%  Similarity=0.449  Sum_probs=132.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~--~kl~DfG~a~~~~~~~~~  152 (325)
T cd05602          75 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--IVLTDFGLCKENIEHNGT  152 (325)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--EEEccCCCCcccccCCCC
Confidence            678876 8888876543         3678999999999999999999999999987765  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..++ .++|||||||++|+|++|+.||........+..    +.....  .....++..+.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~~~--~~~~~~~~~~~~  225 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN----ILNKPL--QLKPNITNSARH  225 (325)
T ss_pred             cccccCCccccCHHHHcCCCCC-CccccccccHHHHHHhcCCCCCCCCCHHHHHHH----HHhCCc--CCCCCCCHHHHH
Confidence            3345699999999999887765 459999999999999999999987654333222    222222  223368899999


Q ss_pred             HHHHhcccCCCCCCCHH----HHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIK----EIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~----ell~h~~f~~~  177 (265)
                      +|.+||..+|.+|+++.    ++++|+||...
T Consensus       226 li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         226 LLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             HHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence            99999999999999876    89999999653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.98  E-value=1.3e-32  Score=239.70  Aligned_cols=173  Identities=32%  Similarity=0.485  Sum_probs=132.8

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--~   69 (265)
                      ||++.+ +|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  .
T Consensus       122 ~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~--~kL~DFG~a~~~~~~~~~~  199 (370)
T cd05621         122 MEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH--LKLADFGTCMKMDETGMVR  199 (370)
T ss_pred             EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC--EEEEecccceecccCCcee
Confidence            788755 8998886533        3567899999999999999999999999987765  9999999987543222  2


Q ss_pred             CCCCcCCCCCcccccccCCc---CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PKSTVGTPAYIAPEVLSRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~---~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ....+||+.|+|||++.+..   +.+.++|+||+||++|+|++|+.||........+..+...  ......|....++..
T Consensus       200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~  277 (370)
T cd05621         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH--KNSLNFPEDVEISKH  277 (370)
T ss_pred             cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcccCCCCcccCCHH
Confidence            23457999999999987643   2345699999999999999999999876544333332221  122344555567999


Q ss_pred             HHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      ++++|.+||..++.+  |+++.++++||||+..
T Consensus       278 ~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            999999999865543  8899999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.98  E-value=1.7e-33  Score=243.10  Aligned_cols=165  Identities=29%  Similarity=0.385  Sum_probs=142.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||||.. .|.+.+....         |.+.|+.++.|||.+.|||||||.-||||..+..  |||+|||-++........
T Consensus       191 MEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~--VKIsDFGTS~e~~~~STk  268 (904)
T KOG4721|consen  191 MEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDV--VKISDFGTSKELSDKSTK  268 (904)
T ss_pred             eeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccce--EEeccccchHhhhhhhhh
Confidence            899988 8999887654         4788999999999999999999999999988776  999999999877666677


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ..++||..|||||++++.+...+ +||||||||||+||||..||.....    ..++-.+......+|.+..++..++-|
T Consensus       269 MSFaGTVaWMAPEvIrnePcsEK-VDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVGsNsL~LpvPstcP~GfklL  343 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNEPCSEK-VDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVGSNSLHLPVPSTCPDGFKLL  343 (904)
T ss_pred             hhhhhhHhhhCHHHhhcCCcccc-cceehhHHHHHHHHhcCCCccccch----heeEEeccCCcccccCcccCchHHHHH
Confidence            78899999999999998887655 9999999999999999999977544    233444455556677777899999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCc
Q 024572          151 LSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~  172 (265)
                      |++||...|..||++.+++.|-
T Consensus       344 ~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  344 LKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             HHHHHhcCCCCCccHHHHHHHH
Confidence            9999999999999999999983

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.98  E-value=3e-32  Score=238.43  Aligned_cols=172  Identities=31%  Similarity=0.462  Sum_probs=130.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~--~kL~DFGl~~~~~~~~~~  157 (381)
T cd05626          80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGH--IKLTDFGLCTGFRWTHNS  157 (381)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCC--EEEeeCcCCccccccccc
Confidence            788855 8988876543         3667899999999999999999999999987765  9999999875321000  


Q ss_pred             ----------------------------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHH
Q 024572           69 ----------------------------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGV  102 (265)
Q Consensus        69 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  102 (265)
                                                                    .....+||+.|+|||++.+..+. .++|||||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlG~  236 (381)
T cd05626         158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT-QLCDWWSVGV  236 (381)
T ss_pred             ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCC-Cccceeehhh
Confidence                                                          01234699999999999887775 4599999999


Q ss_pred             HHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcc--cCCCCCCCHHHHhcCcccCCC
Q 024572          103 TLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFV--ANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       103 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~--~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++|+|++|+.||...........++.  .......|....+++++++||.+|+.  .+|..|+++.++++||||...
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         237 ILFEMLVGQPPFLAPTPTETQLKVIN--WENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             HHHHHHhCCCCCcCCCHHHHHHHHHc--cccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            99999999999987654333222221  11223445555689999999999654  455569999999999999754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.98  E-value=3.3e-32  Score=245.08  Aligned_cols=169  Identities=26%  Similarity=0.399  Sum_probs=133.0

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..+.             ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       118 ~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~--vkL~DFGls~~~~~  195 (496)
T PTZ00283        118 LDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL--VKLGDFGFSKMYAA  195 (496)
T ss_pred             EeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC--EEEEecccCeeccc
Confidence            577765 8988886432             3567899999999999999999999999988775  99999999875432


Q ss_pred             C---CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           67 H---SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        67 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      .   ......+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.......    .+..+..... .+.+..+
T Consensus       196 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s-~k~DVwSlGvilyeLltG~~Pf~~~~~~~----~~~~~~~~~~-~~~~~~~  269 (496)
T PTZ00283        196 TVSDDVGRTFCGTPYYVAPEIWRRKPYS-KKADMFSLGVLLYELLTLKRPFDGENMEE----VMHKTLAGRY-DPLPPSI  269 (496)
T ss_pred             cccccccccccCCcceeCHHHhCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHhcCCC-CCCCCCC
Confidence            2   122345799999999999887765 55999999999999999999998754322    2222222222 2334468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++.+.+|+.+||..+|.+||++.++++|||++..
T Consensus       270 ~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        270 SPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence            9999999999999999999999999999998643

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.98  E-value=5.7e-32  Score=227.10  Aligned_cols=172  Identities=24%  Similarity=0.344  Sum_probs=127.4

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||+++++|.+++...          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... .
T Consensus        78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~~~~  155 (284)
T cd07839          78 FEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGE--LKLADFGLARAFGIPVRC  155 (284)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCc--EEECccchhhccCCCCCC
Confidence            578888888877542          24677899999999999999999999999987765  9999999987543222 1


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------cc-
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------QY-  135 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------~~-  135 (265)
                      .....++..|+|||.+.+....+.++|||||||++|+|++|..||............+......             .. 
T Consensus       156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd07839         156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK  235 (284)
T ss_pred             cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc
Confidence            2234578899999998776544566999999999999999998865544332222111111000             00 


Q ss_pred             cC----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          136 KI----------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       136 ~~----------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ..          .....++..+++||.+||..||.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            00          0112467899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.98  E-value=1.4e-32  Score=240.63  Aligned_cols=171  Identities=33%  Similarity=0.507  Sum_probs=131.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.....   
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~--~kL~DFGla~~~~~~~~~  157 (382)
T cd05625          80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDS  157 (382)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEeECCCCccccccccc
Confidence            788765 8988887644         2567889999999999999999999999988776  999999997522100   


Q ss_pred             ---------------------------------------------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHH
Q 024572           68 ---------------------------------------------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGV  102 (265)
Q Consensus        68 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  102 (265)
                                                                   ......+||+.|+|||++.+..+.. ++|||||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~-~~DiwSlGv  236 (382)
T cd05625         158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGV  236 (382)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC-eeeEEechH
Confidence                                                         0011246899999999998877764 599999999


Q ss_pred             HHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCCC
Q 024572          103 TLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT---IKEIKSHPWFLKN  177 (265)
Q Consensus       103 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s---~~ell~h~~f~~~  177 (265)
                      ++|+|++|+.||..............  .......|....+++++.++|.+|+ .+|.+|++   +.++++||||+..
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         237 ILYEMLVGQPPFLAQTPLETQMKVIN--WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHc--cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            99999999999987654333322221  1122334445568999999999986 59999997   9999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.98  E-value=6.8e-32  Score=231.15  Aligned_cols=168  Identities=30%  Similarity=0.532  Sum_probs=132.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++...... .
T Consensus        80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~--ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGH--IKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEEeccccccccCCCCcc
Confidence            788854 8888876543         3667899999999999999999999999998775  9999999987433222 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....|++.|+|||++.+..++ .++|+||+||++|+|++|+.||........    ...+.......|  ..++..+.+
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~~~~~~p--~~~~~~~~~  230 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYG-KSVDWWAYGVLLYEMLAGQPPFDGEDEDEL----FQSIMEHNVSYP--KSLSKEAVS  230 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCC-CccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCC--ccCCHHHHH
Confidence            2345689999999999887765 459999999999999999999987654322    233333333333  367899999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      ++.+||..+|.+|++     ..++++||||...
T Consensus       231 li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         231 ICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             HHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            999999999999997     4789999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=1.4e-32  Score=240.01  Aligned_cols=171  Identities=33%  Similarity=0.507  Sum_probs=131.9

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++.+ +|.+++...+.         +.+++.++.|||++||+||||||+|||++.++.  +||+|||+|......   
T Consensus        80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~--ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCC--EEEEeCCCCccccccccc
Confidence            788854 89999876543         567899999999999999999999999987765  999999997422100   


Q ss_pred             -----------------------------------------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHH
Q 024572           68 -----------------------------------------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYV  106 (265)
Q Consensus        68 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~  106 (265)
                                                               ......+||+.|+|||++.+..+. .++|||||||++|+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvilye  236 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYE  236 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC-cceeeeeccceeee
Confidence                                                     001134689999999999887775 45999999999999


Q ss_pred             HHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCCC
Q 024572          107 MLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWFLKN  177 (265)
Q Consensus       107 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---s~~ell~h~~f~~~  177 (265)
                      |++|+.||..............  .......+....+++.+.++|.+|+ .+|.+|+   ++.++++||||+..
T Consensus       237 ll~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         237 MLVGQPPFLADTPAETQLKVIN--WETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             hhhCCCCCCCCCHHHHHHHHhc--cCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            9999999987654333222211  1122334444568999999999976 5999999   99999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=1.8e-32  Score=238.07  Aligned_cols=171  Identities=33%  Similarity=0.516  Sum_probs=131.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~--vkL~DfG~~~~~~~~~~~  157 (360)
T cd05627          80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH--VKLSDFGLCTGLKKAHRT  157 (360)
T ss_pred             EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC--EEEeeccCCccccccccc
Confidence            788865 8999887554         3667889999999999999999999999987765  9999999986432110  


Q ss_pred             ----------------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCC
Q 024572           69 ----------------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF  114 (265)
Q Consensus        69 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf  114 (265)
                                                        .....+||+.|+|||++.+..++. ++|||||||++|+|++|+.||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~-~~DiwSlGvilyel~tG~~Pf  236 (360)
T cd05627         158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNK-LCDWWSLGVIMYEMLIGYPPF  236 (360)
T ss_pred             ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCC-cceeccccceeeecccCCCCC
Confidence                                              012346899999999998877764 499999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCCC
Q 024572          115 EDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWFLKN  177 (265)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---s~~ell~h~~f~~~  177 (265)
                      ........+..+...  ......|....++..+++||.+|+ .+|.+|+   ++.++++||||...
T Consensus       237 ~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         237 CSETPQETYRKVMNW--KETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             CCCCHHHHHHHHHcC--CCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            876554333322211  122234444457899999999987 4999998   48999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-32  Score=238.94  Aligned_cols=171  Identities=30%  Similarity=0.478  Sum_probs=130.2

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++. ++|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~--~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGH--IKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC--EEEeeccccccccccccc
Confidence            78885 48988876433         4678899999999999999999999999987765  9999999985321100  


Q ss_pred             ----------------------------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHH
Q 024572           69 ----------------------------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGV  102 (265)
Q Consensus        69 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  102 (265)
                                                                    .....+||+.|+|||++.+..+. .++|||||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGv  236 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG-QECDWWSLGA  236 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC-CceeeEecch
Confidence                                                          00124689999999999887775 4599999999


Q ss_pred             HHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCcccCCC
Q 024572          103 TLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRR---ITIKEIKSHPWFLKN  177 (265)
Q Consensus       103 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---~s~~ell~h~~f~~~  177 (265)
                      ++|+|++|..||........+..+...  ......|....++.++++||.+||. +|.+|   +++.++++||||+..
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         237 IMFECLIGWPPFCSENSHETYRKIINW--RETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHHcc--CCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            999999999999876543333322211  1223345545688999999999997 77765   599999999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=6.2e-32  Score=227.43  Aligned_cols=171  Identities=28%  Similarity=0.394  Sum_probs=130.6

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....           ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++.......
T Consensus        79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~  156 (285)
T cd05630          79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH--IRISDLGLAVHVPEGQ  156 (285)
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC--EEEeeccceeecCCCc
Confidence            56664 58988875432           2567899999999999999999999999987765  9999999987544333


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......|+..|+|||++.+..++ .++|+||+||++|+|++|+.||....................  ......+++.+.
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  233 (285)
T cd05630         157 TIKGRVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ--EEYSEKFSPDAR  233 (285)
T ss_pred             cccCCCCCccccChHHHcCCCCC-CccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh--hhcCccCCHHHH
Confidence            33445789999999999887765 459999999999999999999987543221111111111111  112235788999


Q ss_pred             HHHHHhcccCCCCCCC-----HHHHhcCcccCC
Q 024572          149 NLLSRIFVANPSRRIT-----IKEIKSHPWFLK  176 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s-----~~ell~h~~f~~  176 (265)
                      +|+.+||..||.+|||     +.++++||||+.
T Consensus       234 ~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            9999999999999999     899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=2e-32  Score=234.61  Aligned_cols=169  Identities=28%  Similarity=0.410  Sum_probs=132.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~--~kL~DfG~~~~~~~~~~~  152 (325)
T cd05604          75 LDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGH--VVLTDFGLCKEGIAQSDT  152 (325)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--EEEeecCCcccCCCCCCC
Confidence            677765 7877765443         3677899999999999999999999999988775  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..++. ++|||||||++|+|++|+.||........+.    .+.......  ....+..+.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslG~il~el~~G~~pf~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~  225 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDN-TVDWWCLGAVLYEMLYGLPPFYCRDVAEMYD----NILHKPLVL--RPGASLTAWS  225 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCC-cCccccccceehhhhcCCCCCCCCCHHHHHH----HHHcCCccC--CCCCCHHHHH
Confidence            33456999999999998877754 5999999999999999999998765433322    222222222  2357889999


Q ss_pred             HHHHhcccCCCCCCCH----HHHhcCcccCCCC
Q 024572          150 LLSRIFVANPSRRITI----KEIKSHPWFLKNL  178 (265)
Q Consensus       150 li~~~L~~dP~~R~s~----~ell~h~~f~~~~  178 (265)
                      +|.+||..+|.+||++    .+++.||||....
T Consensus       226 ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~  258 (325)
T cd05604         226 ILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS  258 (325)
T ss_pred             HHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence            9999999999999976    5899999998643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=8.6e-32  Score=226.05  Aligned_cols=172  Identities=22%  Similarity=0.334  Sum_probs=128.4

Q ss_pred             CcccccchHHHHHHh------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVSSLSEFVMLE------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.++|.+++...            .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||++.......
T Consensus        78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~  155 (285)
T cd07861          78 FEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGV--IKLADFGLARAFGIPV  155 (285)
T ss_pred             EecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCc--EEECcccceeecCCCc
Confidence            678877887776532            13678999999999999999999999999988776  9999999986443221


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh--------------h
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------------V  133 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--------------~  133 (265)
                       ......+++.|+|||++.+....+.++|+|||||++|+|++|+.||.+................              .
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY  235 (285)
T ss_pred             ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence             1123357889999999876554456699999999999999999999876543332222211100              0


Q ss_pred             cccC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          134 QYKI---------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       134 ~~~~---------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ....         .....++++++++|.+||..||.+|||+.+++.||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            0000         0122478899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3e-33  Score=259.88  Aligned_cols=171  Identities=26%  Similarity=0.342  Sum_probs=137.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||||++ +|++....-.         ...|++.++.|||++|||||||||.||+++.++.  +|++|||.|.....+.  
T Consensus      1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~--iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGL--IKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred             HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCc--EEeecccceeEecCchhc
Confidence            899988 8988877543         4778999999999999999999999999998886  9999999997655442  


Q ss_pred             ---CCCCCcCCCCCcccccccCCcC--CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 ---RPKSTVGTPAYIAPEVLSRREY--DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ---~~~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                         ......||+.|||||++.+...  ...++||||||||+.||+||+.||...+..   ..++..+... ...+.+..+
T Consensus      1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~aIMy~V~~g-h~Pq~P~~l 1466 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WAIMYHVAAG-HKPQIPERL 1466 (1509)
T ss_pred             CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hHHHhHHhcc-CCCCCchhh
Confidence               1234579999999999987442  245689999999999999999999876543   3333333322 223334469


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +.+.++||.+||..||++|+++.|+++|.|-+..
T Consensus      1467 s~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1467 SSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             hHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence            9999999999999999999999999999987643

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.2e-32  Score=235.23  Aligned_cols=168  Identities=34%  Similarity=0.524  Sum_probs=133.1

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++. ++|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        77 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kL~Dfg~~~~~~~~~~~  154 (318)
T cd05582          77 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKK  154 (318)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCc--EEEeeccCCcccCCCCCc
Confidence            68775 48888876543         3678899999999999999999999999988775  999999998754333 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....|++.|+|||.+.+..+. .++|||||||++|+|++|+.||........    ...+.......|  ..+++.+.+
T Consensus       155 ~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~tg~~p~~~~~~~~~----~~~i~~~~~~~p--~~~~~~~~~  227 (318)
T cd05582         155 AYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGSLPFQGKDRKET----MTMILKAKLGMP--QFLSPEAQS  227 (318)
T ss_pred             eecccCChhhcCHHHHcCCCCC-CccceeccceEeeeeccCCCCCCCCCHHHH----HHHHHcCCCCCC--CCCCHHHHH
Confidence            3345689999999999877665 459999999999999999999987544322    222333333333  357899999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||+     +.+++.||||...
T Consensus       228 li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         228 LLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            999999999999999     7789999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=4.7e-32  Score=231.88  Aligned_cols=168  Identities=29%  Similarity=0.407  Sum_probs=131.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+.+....         ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.... ...
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~~  152 (321)
T cd05603          75 LDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGH--VVLTDFGLCKEGVEPEET  152 (321)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--EEEccCCCCccCCCCCCc
Confidence            688865 7877765433         3678999999999999999999999999988775  99999999874322 222


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+|++.|+|||++.+..++. ++|||||||++|+|++|+.||.......    ....+.......+  ...+..+.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~--~~~~~~~~~  225 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDR-TVDWWCLGAVLYEMLYGLPPFYSRDVSQ----MYDNILHKPLQLP--GGKTVAACD  225 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCC-cCcccccchhhhhhhcCCCCCCCCCHHH----HHHHHhcCCCCCC--CCCCHHHHH
Confidence            33456899999999998877654 4999999999999999999998764322    2222333222233  357889999


Q ss_pred             HHHHhcccCCCCCCCH----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~----~ell~h~~f~~~  177 (265)
                      +|.+||..+|.+|+++    .++++|+||...
T Consensus       226 li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         226 LLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             HHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            9999999999999975    599999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=4.2e-32  Score=236.60  Aligned_cols=173  Identities=33%  Similarity=0.474  Sum_probs=131.7

Q ss_pred             Ccccc-cchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--C
Q 024572            1 MQLGV-SSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--R   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--~   69 (265)
                      ||++. ++|.+++....        .+.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  .
T Consensus       122 ~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~--ikL~DfG~a~~~~~~~~~~  199 (371)
T cd05622         122 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNKEGMVR  199 (371)
T ss_pred             EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCC--EEEEeCCceeEcCcCCccc
Confidence            78885 48998886543        3567889999999999999999999999988765  9999999987543322  2


Q ss_pred             CCCCcCCCCCcccccccCCc---CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PKSTVGTPAYIAPEVLSRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~---~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ....+||+.|+|||++.+..   ..+.++|||||||++|+|++|+.||........+..+...  ......|....++..
T Consensus       200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~  277 (371)
T cd05622         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH--KNSLTFPDDNDISKE  277 (371)
T ss_pred             ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCcccCCCcCCCCHH
Confidence            23457999999999987543   2345699999999999999999999876543333322211  112334555578999


Q ss_pred             HHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      +++||.+||...+.+  |+++.++++|+||++.
T Consensus       278 ~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            999999999844433  7899999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.9e-31  Score=240.55  Aligned_cols=177  Identities=23%  Similarity=0.281  Sum_probs=126.7

Q ss_pred             CcccccchHHHHHH--------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVML--------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~--------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++..+|.+++..              +.++.+++.+|.|||++|||||||||+|||++.++.  +||+|||+++....
T Consensus       242 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~--vkL~DFGla~~~~~  319 (501)
T PHA03210        242 TQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK--IVLGDFGTAMPFEK  319 (501)
T ss_pred             EeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEEeCCCceecCc
Confidence            45556666665532              235778899999999999999999999999987765  99999999975443


Q ss_pred             CCC--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHHHHHhhhcccCC---
Q 024572           67 HSR--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED---PKNFRKTISRIMAVQYKIP---  138 (265)
Q Consensus        67 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~---  138 (265)
                      ...  .....|+..|+|||++.+..+. .++|||||||++|+|++|..++.....   ...+.+.+..+......+|   
T Consensus       320 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  398 (501)
T PHA03210        320 EREAFDYGWVGTVATNSPEILAGDGYC-EITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPP  398 (501)
T ss_pred             ccccccccccCCcCCCCchhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcH
Confidence            222  2235699999999999887775 459999999999999998765433221   1222222221110000000   


Q ss_pred             -----------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          139 -----------------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       139 -----------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                                             ....++.++.++|.+||.+||.+|||+.++|+||||.....+
T Consensus       399 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~  463 (501)
T PHA03210        399 CKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEE  463 (501)
T ss_pred             HHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCch
Confidence                                   011356778889999999999999999999999999875443

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.3e-31  Score=238.22  Aligned_cols=173  Identities=22%  Similarity=0.293  Sum_probs=126.0

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.++|.+++..+          .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....... 
T Consensus       239 ~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~--vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        239 LPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPED--ICLGDFGAACFARGSWST  316 (461)
T ss_pred             EEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCC--EEEcccCCceeccccccc
Confidence            566677787777543          24677899999999999999999999999987765  99999999875432211 


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC-------hHHHHHHHHHHhhhc------
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED-------PKNFRKTISRIMAVQ------  134 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~~------  134 (265)
                        .....||..|+|||++.+..++ .++|||||||++|+|++|..++.....       ...+.+++.......      
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~~~~-~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~  395 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGDPYT-PSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH  395 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCCCCC-chHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence              1234689999999999887765 459999999999999998766543221       112222222211000      


Q ss_pred             --------------------cc---CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 --------------------YK---IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 --------------------~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                          ..   +.....++..+.+||.+||..||.+|||+.++|+||||+.
T Consensus       396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                00   0111135668999999999999999999999999999974

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4e-32  Score=237.17  Aligned_cols=170  Identities=28%  Similarity=0.380  Sum_probs=132.7

Q ss_pred             cccccchHHHHHH-----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC-CCCCC
Q 024572            2 QLGVSSLSEFVML-----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS-LLHSR   69 (265)
Q Consensus         2 e~~~~sL~~~~~~-----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~-~~~~~   69 (265)
                      |||++---|-++.           +.+.++.+++|.|||+++|||||||..|||+.-+|.  |+|+|||.+... .....
T Consensus       109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd--irLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD--IRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc--EeeecccccccchhHHhh
Confidence            7787755555543           345778899999999999999999999999988876  999999987432 22334


Q ss_pred             CCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ..+++||++|||||++..     .+|+. ++||||||++|.+|.-+.+|-...+....+.++   .......+..+..++
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDy-kaDiWSlGITLIEMAqiEPPHhelnpMRVllKi---aKSePPTLlqPS~Ws  262 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDY-KADIWSLGITLIEMAQIEPPHHELNPMRVLLKI---AKSEPPTLLQPSHWS  262 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchh-hhhHHhhhhHHHHHhccCCCccccchHHHHHHH---hhcCCCcccCcchhh
Confidence            567899999999998753     55654 499999999999999999997665443222222   222233344556789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ..+.+|+.+||.+||..||++.++++||||...
T Consensus       263 ~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  263 RSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             hHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence            999999999999999999999999999999754

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.1e-31  Score=241.02  Aligned_cols=168  Identities=29%  Similarity=0.420  Sum_probs=131.9

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..+             .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~--~kL~DFgla~~~~~  221 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGI--IKLGDFGFSKQYSD  221 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCc--EEEEeCcCceecCC
Confidence            788854 898876432             13567889999999999999999999999998775  99999999975433


Q ss_pred             CC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           67 HS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        67 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ..   .....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.......    .+..+..... .+.+..+
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~Pf~~~~~~~----~~~~~~~~~~-~~~~~~~  295 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWERKRYS-KKADMWSLGVILYELLTLHRPFKGPSQRE----IMQQVLYGKY-DPFPCPV  295 (478)
T ss_pred             ccccccccccCCCccccCHhHhCCCCCC-cHHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCCC-CCCCccC
Confidence            22   22345699999999999887765 55999999999999999999997754432    2222222222 2333468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      +..+.+||.+||..+|++||++.+++.|+|++.
T Consensus       296 s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            899999999999999999999999999999853

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=1.5e-31  Score=224.10  Aligned_cols=171  Identities=25%  Similarity=0.374  Sum_probs=129.6

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++..+.          ++.+++.++.|||++||+||||+|+||+++. +  .+||+|||+++........
T Consensus        79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~dfg~~~~~~~~~~~  155 (282)
T cd07831          79 FELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLADFGSCRGIYSKPPY  155 (282)
T ss_pred             EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEEecccccccccCCCc
Confidence            6778788887776532          3667889999999999999999999999987 4  4999999998765444443


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh--------------hhccc
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM--------------AVQYK  136 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------------~~~~~  136 (265)
                      ....++..|+|||.+......+.++|+|||||++|+|++|..||......+..........              ...+.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence            4456889999999876555545669999999999999999999987654333222221100              00011


Q ss_pred             CCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          137 IPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       137 ~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .+.         ...++..+.++|.+||..+|.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            111         12467899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=1.4e-31  Score=227.69  Aligned_cols=174  Identities=23%  Similarity=0.292  Sum_probs=131.7

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||+++++|.+++...          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... .
T Consensus        87 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~--~kL~dfg~~~~~~~~~~~  164 (309)
T cd07845          87 MEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC--LKIADFGLARTYGLPAKP  164 (309)
T ss_pred             EecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEECccceeeecCCccCC
Confidence            688888888877652          24778899999999999999999999999987765  9999999987544322 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------c
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------Q  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------~  134 (265)
                      .....++..|+|||.+.+....+.++|+|||||++|+|++|+.||........+..........               .
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (309)
T cd07845         165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK  244 (309)
T ss_pred             CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc
Confidence            2223467889999998765544566999999999999999999998766544443333221100               0


Q ss_pred             ccCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      +..+.         ....++.+.+||.+||..||++|||+.++++||||++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~  295 (309)
T cd07845         245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE  295 (309)
T ss_pred             ccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            00000         1125788999999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=9.7e-32  Score=222.48  Aligned_cols=170  Identities=31%  Similarity=0.552  Sum_probs=128.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC-CCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS-LLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~-~~~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.+||++||+|+||||+||+++.++.  ++|+|||.+... .....
T Consensus        77 ~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~--~~l~Dfg~~~~~~~~~~~  154 (260)
T PF00069_consen   77 MEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGE--VKLIDFGSSVKLSENNEN  154 (260)
T ss_dssp             EEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSE--EEESSGTTTEESTSTTSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccc
Confidence            577777 8998888333         3677899999999999999999999999997665  999999998642 22333


Q ss_pred             CCCCcCCCCCccccccc-CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCHH
Q 024572           70 PKSTVGTPAYIAPEVLS-RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~-~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  146 (265)
                      .....++..|+|||++. +... +.++|+||||+++|+|++|..||........ ...+........  ........+..
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~-~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  232 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQQGKKY-TRKSDIWSLGIILYELLTGKLPFEESNSDDQ-LEIIEKILKRPLPSSSQQSREKSEE  232 (260)
T ss_dssp             BSSSSSSGGGSCHHHHTTTSSB-STHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-HHHHHHHHHTHHHHHTTSHTTSHHH
T ss_pred             cccccccccccccccccccccc-cccccccccccccccccccccccccccchhh-hhhhhhcccccccccccccchhHHH
Confidence            34556899999999998 4444 5669999999999999999999987632222 222222211111  11111123479


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +.++|.+||..||++|||+.++++||||
T Consensus       233 l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  233 LRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            9999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.6e-32  Score=236.35  Aligned_cols=146  Identities=32%  Similarity=0.495  Sum_probs=121.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEc-CCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchH
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLA   95 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~   95 (265)
                      ++.+|+.++.|||++|||||||||+|||++ +.+  +++|+|||+++.....  ..+.+-|..|.|||++....|+ .++
T Consensus       420 w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt-~ac  494 (612)
T KOG0603|consen  420 WAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--HLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYT-EAC  494 (612)
T ss_pred             HHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--cEEEEEechhhhCchh--hcccchhhcccChhhhccCCCC-cch
Confidence            567788999999999999999999999995 444  4999999998754433  4456788999999999987776 559


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572           96 DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus        96 DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ||||||++||+|++|+.||.......   .+..++....+.    ..+|..+++||.+||+.||.+|+++.+++.||||
T Consensus       495 D~WSLGvlLy~ML~G~tp~~~~P~~~---ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  495 DWWSLGVLLYEMLTGRTLFAAHPAGI---EIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             hhHHHHHHHHHHHhCCCccccCCchH---HHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            99999999999999999998876652   333333322222    4789999999999999999999999999999999

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.97  E-value=2.8e-31  Score=228.30  Aligned_cols=173  Identities=24%  Similarity=0.395  Sum_probs=128.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++ +|+||||||+|||++.++.  +||+|||++..... ..
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~--~kL~Dfg~~~~~~~-~~  158 (333)
T cd06650          82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLID-SM  158 (333)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCC--EEEeeCCcchhhhh-hc
Confidence            688854 9999887543         355688899999975 7999999999999987765  99999999864422 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHH----------------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI----------------------  127 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~----------------------  127 (265)
                      .....++..|+|||++.+..++ .++|+|||||++|+|++|+.||........ ...+                      
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (333)
T cd06650         159 ANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAIGRYPIPPPDAKEL-ELMFGCPVEGDPAESETSPRPRPPGR  236 (333)
T ss_pred             cccCCCCccccCHHHhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcchhHH-HHHhcCcccCCccccccCcccCCccc
Confidence            2345689999999999876665 459999999999999999999975432111 1100                      


Q ss_pred             -------------------HHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          128 -------------------SRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       128 -------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                                         ..+............++.++++||.+||..||++|||+.+++.||||+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             hhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                               000000000001113578899999999999999999999999999997654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=240.78  Aligned_cols=173  Identities=29%  Similarity=0.410  Sum_probs=138.4

Q ss_pred             Ccc-cccchHHHHHHhcc------------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQL-GVSSLSEFVMLEGS------------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~-~~~sL~~~~~~~~~------------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||- .++||+.+++....            .+||+++|.|||.+.|||||||-+||||+.- .|.+||+|||-++....-
T Consensus       651 MEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  651 MEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             eecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhhccC
Confidence            444 45599999986542            7899999999999999999999999999752 345999999998865443


Q ss_pred             -CCCCCCcCCCCCcccccccC-CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           68 -SRPKSTVGTPAYIAPEVLSR-REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                       ....++.||..|||||++-. ..-+++++|||||||++.||.||++||.....+..   .+-++.-.....|.+..++.
T Consensus       730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---AMFkVGmyKvHP~iPeelsa  806 (1226)
T KOG4279|consen  730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---AMFKVGMYKVHPPIPEELSA  806 (1226)
T ss_pred             CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---hhhhhcceecCCCCcHHHHH
Confidence             34456789999999999964 33346789999999999999999999987665432   22223333344555667899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +++.||.+|+.++|..||++.++|..||++..
T Consensus       807 eak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  807 EAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            99999999999999999999999999999754

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=2.4e-31  Score=223.84  Aligned_cols=172  Identities=24%  Similarity=0.377  Sum_probs=132.3

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...+           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~  156 (285)
T cd05632          79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGH--IRISDLGLAVKIPEGE  156 (285)
T ss_pred             EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCC--EEEecCCcceecCCCC
Confidence            566654 7877765432           3567899999999999999999999999987765  9999999986544333


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||++.+..++. ++|+|||||++|+|++|..||...............+.....  .....++..+.
T Consensus       157 ~~~~~~g~~~~~aPE~~~~~~~~~-~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  233 (285)
T cd05632         157 SIRGRVGTVGYMAPEVLNNQRYTL-SPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE--VYSAKFSEEAK  233 (285)
T ss_pred             cccCCCCCcCccChHHhcCCCCCc-ccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc--ccCccCCHHHH
Confidence            334457899999999998777654 489999999999999999999876543332333222222221  22335788999


Q ss_pred             HHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      +|+.+||..||.+||+     +.+++.|+||+..
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         234 SICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            9999999999999999     8899999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.1e-31  Score=218.75  Aligned_cols=167  Identities=32%  Similarity=0.413  Sum_probs=129.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||+++........
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~--~~l~dfg~~~~~~~~~~~  160 (263)
T cd06625          83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRLQTICSS  160 (263)
T ss_pred             EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeecccceeccccccc
Confidence            466644 8888776433         3567899999999999999999999999987765  999999998644322111


Q ss_pred             ----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           71 ----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        71 ----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                          ....++..|+|||.+.+..++ .++||||||+++|+|++|+.||...........    ..........+..++..
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  235 (263)
T cd06625         161 GTGMKSVTGTPYWMSPEVISGEGYG-RKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPD  235 (263)
T ss_pred             cccccCCCcCccccCcceeccCCCC-chhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHH
Confidence                234578899999999887754 559999999999999999999977544332222    22222222333467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +.++|.+||..+|.+|||+.++++|+||
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         236 ARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=4.6e-31  Score=222.74  Aligned_cols=173  Identities=23%  Similarity=0.300  Sum_probs=129.8

Q ss_pred             CcccccchHHHHHHh--------------ccccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCC
Q 024572            1 MQLGVSSLSEFVMLE--------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.++|.+++...              .++.+++.+|.|||++||+||||||+||+++. ++  .+||+|||+++...
T Consensus        85 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~--~~kl~dfg~~~~~~  162 (295)
T cd07837          85 FEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFS  162 (295)
T ss_pred             eeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC--eEEEeecccceecC
Confidence            688888888877542              23677899999999999999999999999987 44  49999999987543


Q ss_pred             CC-CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc---------
Q 024572           66 LH-SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY---------  135 (265)
Q Consensus        66 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---------  135 (265)
                      .. .......+++.|+|||.+.+....+.++|+||||+++|+|++|..||.+.............+.....         
T Consensus       163 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (295)
T cd07837         163 IPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKL  242 (295)
T ss_pred             CCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhc
Confidence            22 12223357888999999876444456699999999999999999999876655444433322110000         


Q ss_pred             ----cCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          136 ----KIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       136 ----~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                          ..+         ....++..+.+||.+||..+|.+||++.+++.||||+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         243 RDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             cchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                000         0124788899999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=8.4e-32  Score=233.50  Aligned_cols=170  Identities=26%  Similarity=0.359  Sum_probs=139.8

Q ss_pred             CcccccchHHHHHHhcc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEGS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||||-+|-+|.+.++..          ....+.+|.||||++.||||||..|||+...+.  |||+|||.|...   ...
T Consensus       105 MEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~--VKLaDFGSAsi~---~PA  179 (948)
T KOG0577|consen  105 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL--VKLADFGSASIM---APA  179 (948)
T ss_pred             HHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe--eeeccccchhhc---Cch
Confidence            89999999999987653          455688899999999999999999999998887  999999988643   345


Q ss_pred             CCCcCCCCCcccccccC---CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 KSTVGTPAYIAPEVLSR---REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .+++|||+|||||++..   +.|+++ +||||||+++.+|...++|+.+.+....+..+.    ....+.-....++..+
T Consensus       180 nsFvGTPywMAPEVILAMDEGqYdgk-vDvWSLGITCIELAERkPPlFnMNAMSALYHIA----QNesPtLqs~eWS~~F  254 (948)
T KOG0577|consen  180 NSFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPLFNMNAMSALYHIA----QNESPTLQSNEWSDYF  254 (948)
T ss_pred             hcccCCccccchhHheeccccccCCc-cceeeccchhhhhhhcCCCccCchHHHHHHHHH----hcCCCCCCCchhHHHH
Confidence            67899999999999864   567777 999999999999999999998876544443332    2222222234678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ++|+..||.+-|..|||.++++.|+|....-+.
T Consensus       255 ~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~  287 (948)
T KOG0577|consen  255 RNFVDSCLQKIPQERPTSEELLKHRFVLRERPP  287 (948)
T ss_pred             HHHHHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence            999999999999999999999999999876553

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=2.8e-31  Score=230.02  Aligned_cols=176  Identities=26%  Similarity=0.366  Sum_probs=132.5

Q ss_pred             CcccccchHHHHHHh-------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE-------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~~-------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+.+...       .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...........
T Consensus       100 ~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~--~kL~Dfg~~~~~~~~~~~~~~  177 (353)
T cd07850         100 MELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPY  177 (353)
T ss_pred             EeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC--EEEccCccceeCCCCCCCCCC
Confidence            678888888776532       24678899999999999999999999999988775  999999999765443333445


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh------------------cc
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV------------------QY  135 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~------------------~~  135 (265)
                      .++..|+|||.+.+..+. .++|||||||++|+|++|+.||........+..++......                  ..
T Consensus       178 ~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (353)
T cd07850         178 VVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRP  256 (353)
T ss_pred             cccccccCHHHHhCCCCC-CchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCC
Confidence            688899999999887775 44999999999999999999998765433333222111000                  00


Q ss_pred             c--------------CCC-----CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          136 K--------------IPD-----YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       136 ~--------------~~~-----~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      .              .+.     ....+..+++||.+||..||.+|||+.++|.||||+....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~  319 (353)
T cd07850         257 KYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD  319 (353)
T ss_pred             CCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence            0              000     1124567899999999999999999999999999975543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.97  E-value=4.1e-31  Score=220.46  Aligned_cols=167  Identities=25%  Similarity=0.357  Sum_probs=126.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-   67 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||+++|+||||||+||+++.++.  +||+|||++...... 
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~--~~l~Dfg~~~~~~~~~  165 (272)
T cd06637          88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRTV  165 (272)
T ss_pred             EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCC--EEEccCCCceeccccc
Confidence            677765 8888776532           3557889999999999999999999999988775  999999998754322 


Q ss_pred             CCCCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           68 SRPKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      .......++..|+|||++.+     ..+ +.++|+||+||++|+|++|+.||..........    ..............
T Consensus       166 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~-~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~  240 (272)
T cd06637         166 GRRNTFIGTPYWMAPEVIACDENPDATY-DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKK  240 (272)
T ss_pred             ccCCcccccccccCHhHhccccCcCCCC-CchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhcCCCCCCCCCC
Confidence            22234568899999999863     234 345999999999999999999997644322211    11111222222335


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ++..+.+||.+||..+|.+|||+.+++.||||
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         241 WSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            78899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=6.1e-32  Score=231.49  Aligned_cols=169  Identities=26%  Similarity=0.344  Sum_probs=143.1

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      |+||++ +|.+.+..+.           +.-|++.++.|||++.|+|||||+.|||+..++.  |||+|||+|+......
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~--VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKK--VKLGDFGLAKILNPED  160 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCc--eeecchhhhhhcCCch
Confidence            788988 8888887655           3667888999999999999999999999998876  8999999999877665


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       ...+.+||+.|++||++.+.+|..+ +|||||||++|+|++-+++|...+......++    .... -.|.+..++.++
T Consensus       161 ~~a~tvvGTp~YmcPEil~d~pYn~K-SDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki----~~~~-~~Plp~~ys~el  234 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCPEILSDIPYNEK-SDIWSLGCCLYEMCTLKPAFKASNMSELILKI----NRGL-YSPLPSMYSSEL  234 (426)
T ss_pred             hhhheecCCCcccCHHHhCCCCCCcc-CcchhhcchHHHHHhcccccCccchHHHHHHH----hhcc-CCCCCccccHHH
Confidence             5667789999999999999998755 99999999999999999999886654333333    3333 345556789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +.+|+.||..+|..||++.++|.+|.+...
T Consensus       235 ~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  235 RSLVKSMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             HHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence            999999999999999999999999887643

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.97  E-value=4.4e-31  Score=221.57  Aligned_cols=171  Identities=25%  Similarity=0.333  Sum_probs=129.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++..++         ++.+++.++.|||++||+||||||+|||++.++.  ++|+|||++...... ..
T Consensus        76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~--~~l~dfg~~~~~~~~-~~  152 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-KP  152 (279)
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCC--EEEccCCcceecccc-Cc
Confidence            677665 8888876543         3567889999999999999999999999987765  999999998644322 22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+....+.++|+||+||++|+|++|..||........ .........  .....+..++.++.++
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~l  229 (279)
T cd05633         153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT--VNVELPDSFSPELKSL  229 (279)
T ss_pred             cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhc--CCcCCccccCHHHHHH
Confidence            3346899999999986433334559999999999999999999976533221 111111111  1222233578999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|+     |+.++++||||+..
T Consensus       230 i~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         230 LEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             HHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence            9999999999999     69999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=3.9e-31  Score=222.06  Aligned_cols=173  Identities=27%  Similarity=0.362  Sum_probs=131.4

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||+++++|.+++...          .++.+++.++.|||++||+|+||||+||+++.++.  ++|+|||++.......  
T Consensus        78 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~--~~l~dfg~~~~~~~~~~~  155 (286)
T cd07832          78 MEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGV--LKIADFGLARLFSEEEPR  155 (286)
T ss_pred             ecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCc--EEEeeeeecccccCCCCC
Confidence            688877998887643          24678899999999999999999999999988765  9999999987554332  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------------  134 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--------------  134 (265)
                      ......++..|+|||.+.+....+.++||||+||++|+|++|.+||.+......+...........              
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07832         156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN  235 (286)
T ss_pred             ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence            123446888999999987655555679999999999999999888877655444333332211000              


Q ss_pred             -ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          135 -YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       135 -~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                       ...+         .....+..+.+||.+||..+|.+|||+.++++||||.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence             0000         0124578899999999999999999999999999983

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=5.2e-31  Score=226.91  Aligned_cols=146  Identities=23%  Similarity=0.361  Sum_probs=112.5

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCch
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKL   94 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~   94 (265)
                      +.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......   .....++..|+|||++.+..++. +
T Consensus       180 ~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~--~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~  256 (338)
T cd05102         180 SFQVARGMEFLASRKCIHRDLAARNILLSENNV--VKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTT-Q  256 (338)
T ss_pred             HHHHHHHHHHHHHCCEECCCCccceEEEcCCCc--EEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCc-c
Confidence            347899999999999999999999999987765  99999999875432211   12234567899999998877654 4


Q ss_pred             HhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           95 ADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        95 ~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +|||||||++|+|++ |..||........+...+.   . ......+..+++.+.+||.+||..||.+|||+.++++
T Consensus       257 sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         257 SDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK---D-GTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             cCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHh---c-CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999997 9999987554333222221   1 1122233467899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.97  E-value=2.2e-31  Score=224.01  Aligned_cols=157  Identities=24%  Similarity=0.396  Sum_probs=119.4

Q ss_pred             cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCC--cCCCc
Q 024572           17 SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR--EYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~   93 (265)
                      ++.+++.++.|||+ .+|+||||||+||+++.++.  +||+|||+++............++..|+|||.+.+.  ...+.
T Consensus       112 i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  189 (288)
T cd06616         112 IAVATVKALNYLKEELKIIHRDVKPSNILLDRNGN--IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDV  189 (288)
T ss_pred             HHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCc--EEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcc
Confidence            35668889999997 59999999999999987765  999999998754443333445688899999998765  23345


Q ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KI--PDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++||||+||++|+|++|+.||.....   ....+........ ..  .....++..+.+||.+||..+|++|||+.+++.
T Consensus       190 ~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         190 RSDVWSLGITLYEVATGKFPYPKWNS---VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             hhhhhHHHHHHHHHHhCCCCchhcch---HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            69999999999999999999976541   1122222211111 11  112347889999999999999999999999999


Q ss_pred             CcccCCCC
Q 024572          171 HPWFLKNL  178 (265)
Q Consensus       171 h~~f~~~~  178 (265)
                      ||||+...
T Consensus       267 ~~~~~~~~  274 (288)
T cd06616         267 HPFIKDYE  274 (288)
T ss_pred             Chhhhchh
Confidence            99997643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=9.3e-31  Score=218.27  Aligned_cols=168  Identities=29%  Similarity=0.480  Sum_probs=130.2

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++. .++|+|||+++....   .
T Consensus        88 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~~~l~dfg~~~~~~~---~  163 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD-RIYLCDYGLCKIIGT---P  163 (267)
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCC-eEEEecCccceecCC---C
Confidence            67775 59999887653         3677899999999999999999999999987761 499999999864432   2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||++.+..+. .++|+||+|+++|+|++|+.||............+....  ....+....+++.+.+|
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l  240 (267)
T PHA03390        164 SCYDGTLDYFSPEKIKGHNYD-VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QKKLPFIKNVSKNANDF  240 (267)
T ss_pred             ccCCCCCcccChhhhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--cccCCcccccCHHHHHH
Confidence            234688899999999887765 459999999999999999999985443221111111111  22223334689999999


Q ss_pred             HHHhcccCCCCCCC-HHHHhcCcccC
Q 024572          151 LSRIFVANPSRRIT-IKEIKSHPWFL  175 (265)
Q Consensus       151 i~~~L~~dP~~R~s-~~ell~h~~f~  175 (265)
                      |.+||..+|.+|++ ++++++||||+
T Consensus       241 i~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        241 VQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHHhccChhhCCchHHHHhcCCccc
Confidence            99999999999996 69999999996

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.97  E-value=3.4e-31  Score=220.04  Aligned_cols=169  Identities=30%  Similarity=0.384  Sum_probs=129.1

Q ss_pred             Cccccc-chHHHHHHh------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLE------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++...            .++.+++.++.+||++||+||||+|+||+++.++.  ++|+|||++......
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~--~~l~df~~~~~~~~~  155 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGS--VKIADFGVSASLADG  155 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC--EEEcccchHHHhccC
Confidence            566654 788877542            24677899999999999999999999999998765  999999998654433


Q ss_pred             CCC-----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC---C
Q 024572           68 SRP-----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP---D  139 (265)
Q Consensus        68 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~  139 (265)
                      ...     ....++..|+|||.+......+.++|+|||||++|+|++|+.||........+......   .....+   .
T Consensus       156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~  232 (267)
T cd06610         156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPSLETGAD  232 (267)
T ss_pred             ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCCcCCccc
Confidence            221     23458889999999877633455699999999999999999999876554333332221   111111   1


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...++..+.+++.+||..||.+|||+.++++||||
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             cccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            23578899999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.2e-31  Score=227.73  Aligned_cols=173  Identities=28%  Similarity=0.473  Sum_probs=127.8

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++....          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||++........
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGH--IRLADFGSCLRLLADGT  157 (331)
T ss_pred             EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCC--EEEEECCceeecCCCCC
Confidence            67764 48998886522          3677899999999999999999999999987765  99999999865433222


Q ss_pred             C--CCCcCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC-CCCC
Q 024572           70 P--KSTVGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-DYVH  142 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  142 (265)
                      .  ....||+.|+|||++..    ....+.++||||+||++|+|++|+.||........+..+....  .....+ ....
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~  235 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK--EHFQFPPDVTD  235 (331)
T ss_pred             ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CcccCCCccCC
Confidence            1  22468999999999863    2233456999999999999999999998765433333322111  111122 2235


Q ss_pred             CCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          143 ISQDCRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      ++..+++||.+||..++.+  |+++.++++||||...
T Consensus       236 ~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         236 VSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             CCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            7899999999998764443  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=1.5e-31  Score=229.77  Aligned_cols=173  Identities=27%  Similarity=0.453  Sum_probs=128.2

Q ss_pred             Ccccc-cchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++...          .++.+++.++.|||++||+||||||+|||++.++.  +||+|||++........
T Consensus        80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~--~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH--IRLADFGSCLKLMEDGT  157 (332)
T ss_pred             EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC--EEEeecchheecccCCc
Confidence            68775 4899998652          23567889999999999999999999999987765  99999999865432222


Q ss_pred             --CCCCcCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC-CCCC
Q 024572           70 --PKSTVGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-DYVH  142 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  142 (265)
                        ....+||+.|+|||++.+    ....+.++|||||||++|+|++|+.||........+..+....  .....| ....
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~~~p~~~~~  235 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK--ERFQFPAQVTD  235 (332)
T ss_pred             ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC--ccccCCCcccc
Confidence              223469999999999863    2223456999999999999999999998765433333322111  111222 2235


Q ss_pred             CCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          143 ISQDCRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      ++..+++||.+||..++.+  |+++.++++||||...
T Consensus       236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             CCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            7999999999999765544  6899999999999754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.97  E-value=7e-31  Score=220.35  Aligned_cols=167  Identities=25%  Similarity=0.347  Sum_probs=126.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-   67 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++...... 
T Consensus        98 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~--~~l~dfg~~~~~~~~~  175 (282)
T cd06636          98 MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRTV  175 (282)
T ss_pred             EEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEeeCcchhhhhccc
Confidence            678766 8888876422           3567899999999999999999999999987765  999999998644322 


Q ss_pred             CCCCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           68 SRPKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      .......++..|+|||.+..     ..++ .++|+|||||++|+|++|+.||...........    .............
T Consensus       176 ~~~~~~~~~~~y~aPE~l~~~~~~~~~~~-~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~  250 (282)
T cd06636         176 GRRNTFIGTPYWMAPEVIACDENPDATYD-YRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL----IPRNPPPKLKSKK  250 (282)
T ss_pred             cCCCcccccccccCHhhcCcccCcCcCCC-cccchhHHHHHHHHHHhCCCCccccCHHhhhhh----HhhCCCCCCcccc
Confidence            22234568899999999863     2343 459999999999999999999976543222211    1111111112235


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ++..+.+||.+||..||.+|||+.++++||||
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         251 WSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            78899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.97  E-value=1.7e-30  Score=218.13  Aligned_cols=174  Identities=25%  Similarity=0.351  Sum_probs=129.2

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|..++...          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... 
T Consensus        81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~--~kl~dfg~~~~~~~~~~  158 (282)
T cd06643          81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNTRTIQ  158 (282)
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCC--EEEcccccccccccccc
Confidence            566655 666665431          24667899999999999999999999999987765  9999999986543221 


Q ss_pred             CCCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 RPKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ......++..|+|||++..     ..+ +.++|+||+||++|+|++|+.||..............   ......+.+..+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~  234 (282)
T cd06643         159 RRDSFIGTPYWMAPEVVMCETSKDRPY-DYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRW  234 (282)
T ss_pred             ccccccccccccCHhhccccCCCCCCC-CccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh---cCCCCCCCcccc
Confidence            2233468899999999842     223 3459999999999999999999977554332222211   111122333467


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +..+.+||.+||..+|.+||++.++++||||+.....
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  271 (282)
T cd06643         235 SSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNK  271 (282)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCCC
Confidence            8999999999999999999999999999999865443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=224.65  Aligned_cols=156  Identities=28%  Similarity=0.405  Sum_probs=133.1

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHh
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLAD   96 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D   96 (265)
                      ...+|+-+|.+||+.+||+|||||+|||+|+.|+  |+|+|+|+|............+||..|||||++.+..|+.. .|
T Consensus       292 YAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh--vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s-~D  368 (591)
T KOG0986|consen  292 YAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH--VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFS-PD  368 (591)
T ss_pred             HHHHHHhhHHHHHhcceeeccCChhheeeccCCC--eEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCC-cc
Confidence            4566788899999999999999999999998887  99999999998887777777899999999999999887655 89


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcC
Q 024572           97 VWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI-----TIKEIKSH  171 (265)
Q Consensus        97 iwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~ell~h  171 (265)
                      +|||||++|+|+.|+.||..........++-+++.......+  ..+|+++++|.+.+|.+||.+|.     ++.++.+|
T Consensus       369 wf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H  446 (591)
T KOG0986|consen  369 WFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH  446 (591)
T ss_pred             HHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence            999999999999999999876654444444444544444444  37899999999999999999998     57799999


Q ss_pred             cccCCC
Q 024572          172 PWFLKN  177 (265)
Q Consensus       172 ~~f~~~  177 (265)
                      |||+.-
T Consensus       447 pfFk~l  452 (591)
T KOG0986|consen  447 PFFKDL  452 (591)
T ss_pred             cccccC
Confidence            999863

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.97  E-value=1.7e-30  Score=218.21  Aligned_cols=172  Identities=24%  Similarity=0.365  Sum_probs=128.6

Q ss_pred             CcccccchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVSSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.++|.+++...           .++.+++.++.|||++|++||||+|+||+++.++.  +||+|||++....... 
T Consensus        78 ~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~--~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          78 FEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVR  155 (284)
T ss_pred             eeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEEeeccchhhcccCcc
Confidence            677777777776542           23567889999999999999999999999998776  9999999986543221 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh--------------c
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------------Q  134 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------~  134 (265)
                      ......++..|+|||.+.+....+.++|+|||||++|+|++|+.||...................              .
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK  235 (284)
T ss_pred             ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence            12233568889999998776654566999999999999999999998765544333322211100              0


Q ss_pred             ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...+         ....++..++++|.+||..||.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            0000         012467889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.9e-31  Score=223.93  Aligned_cols=170  Identities=31%  Similarity=0.523  Sum_probs=143.2

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||-|-+ .|-..++.|+.         +.-+++++.|||++|||+|||||+|++++.+|.  +||.|||+|+........
T Consensus       499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy--~KLVDFGFAKki~~g~KT  576 (732)
T KOG0614|consen  499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY--LKLVDFGFAKKIGSGRKT  576 (732)
T ss_pred             HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc--eEEeehhhHHHhccCCce
Confidence            454544 55555555553         445688999999999999999999999999987  999999999998888888


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .++|||+.|.|||++.+++.+. ++|.||||+++|||++|.+||.+.+....+..+++.+-...  +|  ..++..+.+|
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~-avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~--~P--r~I~k~a~~L  651 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDR-AVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE--FP--RRITKTATDL  651 (732)
T ss_pred             eeecCCcccccchhhhccCcch-hhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh--cc--cccchhHHHH
Confidence            8999999999999999988864 49999999999999999999999888777766666554332  33  3688899999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      |+++...+|.+|..     +.+|..|.||..-
T Consensus       652 ik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  652 IKKLCRDNPTERLGYQKGGINDIKKHRWFEGF  683 (732)
T ss_pred             HHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence            99999999999985     8999999999753

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.7e-31  Score=214.25  Aligned_cols=169  Identities=36%  Similarity=0.575  Sum_probs=135.5

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC-CCCCCCCCcCCCCCcccccccCCcCCCchHh
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL-LHSRPKSTVGTPAYIAPEVLSRREYDGKLAD   96 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D   96 (265)
                      -..|..+|-|||+++||+||||.+|+|+|.++.  +||+|||+|+... .....+++|||+.|+|||++....|. .++|
T Consensus       274 GaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH--IKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYg-raVD  350 (516)
T KOG0690|consen  274 GAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH--IKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYG-RAVD  350 (516)
T ss_pred             hHHHHHHhhhhhhCCeeeeechhhhheeccCCc--eEeeecccchhcccccceeccccCChhhcCchhhcccccc-ceee
Confidence            345788999999999999999999999999887  9999999998543 34556778999999999999988875 5599


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcC
Q 024572           97 VWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI-----TIKEIKSH  171 (265)
Q Consensus        97 iwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~ell~h  171 (265)
                      +|.+|+++|+|++|+.||...+....+.-    +.....++|.  .++++++.|+..+|.+||.+|.     .+.+|.+|
T Consensus       351 WWG~GVVMYEMmCGRLPFyn~dh~kLFeL----Il~ed~kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  351 WWGVGVVMYEMMCGRLPFYNKDHEKLFEL----ILMEDLKFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             hhhhhHHHHHHHhccCcccccchhHHHHH----HHhhhccCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence            99999999999999999998776544333    3334445555  6899999999999999999998     58999999


Q ss_pred             cccCCCCChhhHHHHHHHhhhcCCCCCCCcC
Q 024572          172 PWFLKNLPRELTETAQAIYYRKENPTFSLQS  202 (265)
Q Consensus       172 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (265)
                      +||.....       +.....+-.|++..+.
T Consensus       425 ~FF~~v~W-------~~~~~Kki~PPfKPqV  448 (516)
T KOG0690|consen  425 RFFASVDW-------EATYRKKIEPPFKPQV  448 (516)
T ss_pred             hhhccCCH-------HHHHHhccCCCCCCCc
Confidence            99976432       3333444445554443

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.97  E-value=2.1e-30  Score=214.33  Aligned_cols=166  Identities=23%  Similarity=0.365  Sum_probs=128.1

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.+||++||+||||||+||+++.++.  ++|+|||++.......
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~--~~l~df~~~~~~~~~~  156 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNI--IKVGDLGIARVLENQC  156 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCc--EEEecccceEEecccC
Confidence            677754 888887652           23566888999999999999999999999987765  9999999987543222


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       ......+++.|+|||++.+..++ .++|+|||||++|+|++|+.||.........    ..+..... .+....++..+
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~  230 (257)
T cd08223         157 DMASTLIGTPYYMSPELFSNKPYN-YKSDVWALGCCVYEMATLKHAFNAKDMNSLV----YRIIEGKL-PPMPKDYSPEL  230 (257)
T ss_pred             CccccccCCcCccChhHhcCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHhcCC-CCCccccCHHH
Confidence             22334688899999999887665 4599999999999999999999765432221    22222111 12234578999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++|.+||..+|.+|||+.++++||||
T Consensus       231 ~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         231 GELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=1e-30  Score=220.98  Aligned_cols=175  Identities=26%  Similarity=0.354  Sum_probs=131.7

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||+.+++|.+++....          ++.+++.+|.|||++||+||||||+||+++.++.  ++|+|||+++...... .
T Consensus        81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~--~~l~dfg~~~~~~~~~~~  158 (298)
T cd07841          81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGV--LKLADFGLARSFGSPNRK  158 (298)
T ss_pred             EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCC--EEEccceeeeeccCCCcc
Confidence            6778778888887654          3677899999999999999999999999998765  9999999987544332 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-------cC-----
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-------KI-----  137 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~-----  137 (265)
                      .....++..|+|||.+.+....+.++|+|||||++|+|++|.+||........+............       ..     
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (298)
T cd07841         159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE  238 (298)
T ss_pred             ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence            223356788999999866544456699999999999999998888776554433333221100000       00     


Q ss_pred             -----C-----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          138 -----P-----DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       138 -----~-----~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                           +     .....+..+.++|.+||..+|++|||+.+++.|+||.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~  288 (298)
T cd07841         239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSND  288 (298)
T ss_pred             ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCC
Confidence                 0     012357889999999999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.97  E-value=3.3e-31  Score=214.80  Aligned_cols=172  Identities=27%  Similarity=0.415  Sum_probs=136.3

Q ss_pred             CcccccchHHHHHHh-------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE-------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~~-------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||+-..+|.+++...       .++.|.+.++.|||+.||+||||||+||++..+..  +||.|||+|+.....-..+..
T Consensus       100 ~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~--lKi~dfg~ar~e~~~~~mtpy  177 (369)
T KOG0665|consen  100 MELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCT--LKILDFGLARTEDTDFMMTPY  177 (369)
T ss_pred             HHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhh--eeeccchhhcccCcccccCch
Confidence            677777888777643       35677888999999999999999999999988876  999999999866555455667


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-------------------
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-------------------  134 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------  134 (265)
                      +.+..|+|||++.+..+... +||||+||++.+|++|+..|.+....+++.++........                   
T Consensus       178 VvtRyyrapevil~~~~ke~-vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~  256 (369)
T KOG0665|consen  178 VVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRP  256 (369)
T ss_pred             hheeeccCchheeccCCccc-chhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcCh
Confidence            89999999999999887655 9999999999999999999998766666555544321110                   


Q ss_pred             -c-------cCCCC---------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          135 -Y-------KIPDY---------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       135 -~-------~~~~~---------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                       +       .+|+.         ..-+..+++++.+||..+|++|.|+.++|+||||+
T Consensus       257 ~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  257 QYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence             0       01110         01234678999999999999999999999999997

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=2e-30  Score=218.88  Aligned_cols=172  Identities=24%  Similarity=0.337  Sum_probs=130.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++..+|.+++..+.          ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||++...... ..
T Consensus        85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~--~~l~d~g~~~~~~~~~~~  162 (293)
T cd07843          85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI--LKICDFGLAREYGSPLKP  162 (293)
T ss_pred             ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCc--EEEeecCceeeccCCccc
Confidence            6788888888776532          3667899999999999999999999999998765  999999998755443 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh----------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV----------------  133 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------  133 (265)
                      .....++..|+|||.+.+....+.++|+||+|+++|+|++|..||...................                
T Consensus       163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (293)
T cd07843         163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK  242 (293)
T ss_pred             cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence            2334578899999998765544566999999999999999999998766544433332211000                


Q ss_pred             -ccc-------CCCCCC--CCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          134 -QYK-------IPDYVH--ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       134 -~~~-------~~~~~~--~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                       ...       ......  +++.+.++|.+||..+|++|||+.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence             000       000111  47889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=7.4e-32  Score=223.12  Aligned_cols=172  Identities=28%  Similarity=0.396  Sum_probs=132.4

Q ss_pred             cccccchHHHHHHhcc-----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCC------------------CCc
Q 024572            2 QLGVSSLSEFVMLEGS-----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSP------------------APR   52 (265)
Q Consensus         2 e~~~~sL~~~~~~~~~-----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~------------------~~~   52 (265)
                      |+.+.|+.||+..++.           ..|++.++.+||+.+++|.||||+|||+.++.                  ...
T Consensus       171 ellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~  250 (415)
T KOG0671|consen  171 ELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTA  250 (415)
T ss_pred             eccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcc
Confidence            6778899999987543           56889999999999999999999999983211                  124


Q ss_pred             EEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh
Q 024572           53 LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA  132 (265)
Q Consensus        53 vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~  132 (265)
                      |+|+|||.|+..  .......+.|..|+|||++.+.+++.+ +||||+||||+|+.+|...|+..++.+.+ .+++++..
T Consensus       251 I~vIDFGsAtf~--~e~hs~iVsTRHYRAPEViLgLGwS~p-CDvWSiGCIL~ElytG~~LFqtHen~EHL-aMMerIlG  326 (415)
T KOG0671|consen  251 IKVIDFGSATFD--HEHHSTIVSTRHYRAPEVILGLGWSQP-CDVWSIGCILVELYTGETLFQTHENLEHL-AMMERILG  326 (415)
T ss_pred             eEEEecCCccee--ccCcceeeeccccCCchheeccCcCCc-cCceeeeeEEEEeeccceecccCCcHHHH-HHHHHhhC
Confidence            899999998743  333456679999999999999999766 99999999999999999999988766544 33333322


Q ss_pred             hc------------------ccCCC---------------CC--------CCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          133 VQ------------------YKIPD---------------YV--------HISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       133 ~~------------------~~~~~---------------~~--------~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ..                  ..++.               +.        .-...+.+||++||.+||.+|+|+.|+|.|
T Consensus       327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH  406 (415)
T ss_pred             CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence            10                  01110               00        011357899999999999999999999999


Q ss_pred             cccCCC
Q 024572          172 PWFLKN  177 (265)
Q Consensus       172 ~~f~~~  177 (265)
                      |||+..
T Consensus       407 pFF~~~  412 (415)
T KOG0671|consen  407 PFFARL  412 (415)
T ss_pred             HHhhcC
Confidence            999754

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=8.1e-31  Score=225.62  Aligned_cols=176  Identities=26%  Similarity=0.356  Sum_probs=128.0

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---   69 (265)
                      ||++.++|.+.+..+.        ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.......   
T Consensus        87 ~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~--~kl~dfg~~~~~~~~~~~~~  164 (336)
T cd07849          87 QELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD--LKICDFGLARIADPEHDHTG  164 (336)
T ss_pred             ehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC--EEECcccceeeccccccccC
Confidence            5677777776665432        4667899999999999999999999999988765  99999999865432211   


Q ss_pred             -CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh-----------h-----
Q 024572           70 -PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-----------A-----  132 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------~-----  132 (265)
                       .....++..|+|||.+.+....+.++|+||+||++|+|++|+.||.+...............           .     
T Consensus       165 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (336)
T cd07849         165 FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARN  244 (336)
T ss_pred             CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhh
Confidence             12346788999999876544445669999999999999999999976543222111111000           0     


Q ss_pred             ----hc--ccCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          133 ----VQ--YKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       133 ----~~--~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                          ..  ...+   .....+..+.++|.+||..+|.+|||+.++++||||+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         245 YIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             HHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence                00  0000   0124578899999999999999999999999999998654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=1.8e-30  Score=218.01  Aligned_cols=172  Identities=23%  Similarity=0.385  Sum_probs=126.2

Q ss_pred             Ccccccc-hHHHHH---------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSS-LSEFVM---------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~s-L~~~~~---------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+. |..++.         ...++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... .
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~  156 (286)
T cd07847          79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQ--IKLCDFGFARILTGPGDD  156 (286)
T ss_pred             EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCc--EEECccccceecCCCccc
Confidence            5676664 443332         2234677899999999999999999999999987765  9999999987554332 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------c
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------Q  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------~  134 (265)
                      .....++..|+|||.+.+....+.++|+||||+++|+|++|+.||.+.................               .
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd07847         157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG  236 (286)
T ss_pred             ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccc
Confidence            2334578899999998764444556999999999999999999998766544333222111000               0


Q ss_pred             ccCCC----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...+.          ...++..+.+||.+||..+|++||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            00111          12467889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.97  E-value=1.6e-30  Score=215.76  Aligned_cols=171  Identities=30%  Similarity=0.491  Sum_probs=132.4

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+.. ++|.+++....         ++.+++.++.|||++|++|+||+|+||+++.++.  ++|+|||+++........
T Consensus        72 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~--~~l~df~~~~~~~~~~~~  149 (262)
T cd05572          72 MEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGY--VKLVDFGFAKKLKSGQKT  149 (262)
T ss_pred             EecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCC--EEEeeCCcccccCccccc
Confidence            56654 58998887654         3457889999999999999999999999988765  999999998765443333


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..++. ++|+||+|+++|+|++|..||.......  ......+.........+...+..+.++
T Consensus       150 ~~~~~~~~~~~PE~~~~~~~~~-~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (262)
T cd05572         150 WTFCGTPEYVAPEIILNKGYDF-SVDYWSLGILLYELLTGRPPFGEDDEDP--MEIYNDILKGNGKLEFPNYIDKAAKDL  226 (262)
T ss_pred             ccccCCcCccChhHhcCCCCCC-hhhhhhhHHHHHHHHhCCCCcCCCCCCH--HHHHHHHhccCCCCCCCcccCHHHHHH
Confidence            3456888999999987766654 4999999999999999999998765211  222222222122223333458899999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~  176 (265)
                      |.+||..+|.+||+     +.++++||||+.
T Consensus       227 i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         227 IKQLLRRNPEERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             HHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence            99999999999999     999999999975

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-30  Score=222.26  Aligned_cols=169  Identities=31%  Similarity=0.458  Sum_probs=131.7

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.+|.|||++||+||||||+||+++.++.  ++|+|||++.......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~~~  157 (316)
T cd05574          80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGH--IMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCC--EEEeecchhhcccccc
Confidence            576654 8988876431           3568899999999999999999999999988765  9999999976432211


Q ss_pred             C------------------------------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Q 024572           69 R------------------------------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE  118 (265)
Q Consensus        69 ~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~  118 (265)
                      .                              .....|+..|+|||++.+..++ .++||||||+++|+|++|+.||.+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHG-SAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCC-chHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            0                              1123578889999999877664 55999999999999999999998766


Q ss_pred             ChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHhcCcccCC
Q 024572          119 DPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT----IKEIKSHPWFLK  176 (265)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~ell~h~~f~~  176 (265)
                      ....+...    .......+....++..+.++|.+||..+|++|||    +.++++||||++
T Consensus       237 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         237 RDETFSNI----LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             hHHHHHHH----hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            54433332    2223334443347899999999999999999999    999999999975

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.97  E-value=2.5e-30  Score=218.84  Aligned_cols=173  Identities=25%  Similarity=0.390  Sum_probs=131.5

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||++.+ +|.+++...        .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++........ .
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~--~kl~dfg~~~~~~~~~~~~  173 (296)
T cd06654          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR  173 (296)
T ss_pred             ecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC--EEECccccchhcccccccc
Confidence            576654 898887543        23567889999999999999999999999987765  99999998864432221 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||.+.+..++ .++|+|||||++|+|++|+.||............   ........+.+..++..+.++
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l  249 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDF  249 (296)
T ss_pred             CcccCCccccCHHHHcCCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH---hcCCCCCCCCccccCHHHHHH
Confidence            234688899999999876664 4599999999999999999999775543222211   111112223334678899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..+|.+|||+.++++||||....+
T Consensus       250 i~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         250 LNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             HHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence            99999999999999999999999975433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=1.7e-30  Score=217.91  Aligned_cols=173  Identities=24%  Similarity=0.400  Sum_probs=127.8

Q ss_pred             Cccccc-chHHHH-----HHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCc
Q 024572            1 MQLGVS-SLSEFV-----MLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV   74 (265)
Q Consensus         1 me~~~~-sL~~~~-----~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~   74 (265)
                      ||++.+ +|..+.     .....+.+++.++.|||++||+|+||||+||+++.++.  ++|+|||++..... .......
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~--~~l~dfg~~~~~~~-~~~~~~~  154 (279)
T cd06619          78 TEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQ--VKLCDFGVSTQLVN-SIAKTYV  154 (279)
T ss_pred             EecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCC--EEEeeCCcceeccc-ccccCCC
Confidence            566666 454332     22345778999999999999999999999999988776  99999999875432 2233457


Q ss_pred             CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH---HHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 024572           75 GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN---FRKTISRIMAVQYKIPDYVHISQDCRNLL  151 (265)
Q Consensus        75 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li  151 (265)
                      ++..|+|||.+.+..+. .++|+|||||++|+|++|+.||........   .......+.............++++.++|
T Consensus       155 ~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  233 (279)
T cd06619         155 GTNAYMAPERISGEQYG-IHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFI  233 (279)
T ss_pred             CChhhcCceeecCCCCC-CcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHH
Confidence            89999999999877765 459999999999999999999965332111   11111111111111111234778999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          152 SRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       152 ~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+||..+|.+||++.++++||||...
T Consensus       234 ~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         234 TQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHhhCChhhCCCHHHHhcCcccccc
Confidence            99999999999999999999999754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=1.1e-30  Score=218.73  Aligned_cols=171  Identities=27%  Similarity=0.414  Sum_probs=131.4

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||+..+ +|.+++....           ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||++.......
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~--~~l~dfg~~~~~~~~~  149 (277)
T cd05577          72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGN--VRISDLGLAVELKGGK  149 (277)
T ss_pred             EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEEccCcchhhhccCC
Confidence            566654 8888876654           2567889999999999999999999999988775  9999999987544333


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||.+.+..++ .++|+|||||++|+|++|+.||...................  ....+..+++.+.
T Consensus       150 ~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  226 (277)
T cd05577         150 KIKGRAGTPGYMAPEVLQGEVYD-FSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM--AVEYPDKFSPEAK  226 (277)
T ss_pred             ccccccCCCCcCCHHHhcCCCCC-chhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc--cccCCccCCHHHH
Confidence            33445678899999998876654 45999999999999999999997755422222222222211  1222335789999


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 024572          149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLK  176 (265)
Q Consensus       149 ~li~~~L~~dP~~R~-----s~~ell~h~~f~~  176 (265)
                      ++|.+||..+|.+||     ++.++++||||+.
T Consensus       227 ~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         227 DLCEALLQKDPEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             HHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence            999999999999999     8888999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4e-30  Score=214.86  Aligned_cols=173  Identities=25%  Similarity=0.307  Sum_probs=132.3

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~   70 (265)
                      ||++.+ +|.+++...        ..+.+++.++.|||+++|+||||+|+||+++.++.  ++|+|||+++..... ...
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~~~  155 (274)
T cd06609          78 MEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD--VKLADFGVSGQLTSTMSKR  155 (274)
T ss_pred             EEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEEcccccceeeccccccc
Confidence            456554 788887764        24777889999999999999999999999998776  999999998755433 223


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..++ .++|+||||+++|+|++|+.||........    ...+............++..+.++
T Consensus       156 ~~~~~~~~y~~PE~~~~~~~~-~~sDv~slG~il~~l~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  230 (274)
T cd06609         156 NTFVGTPFWMAPEVIKQSGYD-EKADIWSLGITAIELAKGEPPLSDLHPMRV----LFLIPKNNPPSLEGNKFSKPFKDF  230 (274)
T ss_pred             ccccCCccccChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCcccCchHHH----HHHhhhcCCCCCcccccCHHHHHH
Confidence            345688899999999887754 559999999999999999999976543222    111111111111111278899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +.+||..+|++|||+.++++||||++....
T Consensus       231 l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  260 (274)
T cd06609         231 VSLCLNKDPKERPSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             HHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence            999999999999999999999999876554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.1e-30  Score=224.02  Aligned_cols=175  Identities=25%  Similarity=0.299  Sum_probs=132.1

Q ss_pred             CcccccchHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            1 MQLGVSSLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      ||++.++|.+++...         .++.+++.++.|||++||+||||||.||+++.++.  ++|+|||++.......   
T Consensus        83 ~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~--~~L~dfg~~~~~~~~~~~~  160 (330)
T cd07834          83 TELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCD--LKICDFGLARGVDPDEDEK  160 (330)
T ss_pred             ecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEcccCceEeeccccccc
Confidence            677777888776543         24677899999999999999999999999988765  9999999987554432   


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-------------
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-------------  134 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------------  134 (265)
                       ......++..|+|||.+.+....+.++|+||||+++|+|++|+.||........+..+........             
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  240 (330)
T cd07834         161 GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKAR  240 (330)
T ss_pred             ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchh
Confidence             223346788999999998873445569999999999999999999987665433333222110000             


Q ss_pred             -------cc--C---CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 -------YK--I---PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 -------~~--~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                             ..  .   .....++..+.++|.+||..+|.+|||+.++++||||++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         241 NYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             hHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence                   00  0   0012367889999999999999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=4e-30  Score=220.95  Aligned_cols=175  Identities=23%  Similarity=0.309  Sum_probs=129.0

Q ss_pred             CcccccchHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVSSLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||+++.+|.+++...         .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.......  
T Consensus        85 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~--~kl~Dfg~a~~~~~~~~~~  162 (332)
T cd07857          85 EELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE--LKICDFGLARGFSENPGEN  162 (332)
T ss_pred             EecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCC--EEeCcCCCceecccccccc
Confidence            567777888777533         24678899999999999999999999999988765  99999999875432211  


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh-----------hh--
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-----------AV--  133 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------~~--  133 (265)
                         .....++..|+|||.+.+....+.++|+||+||++|++++|+.||........+...+....           ..  
T Consensus       163 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
T cd07857         163 AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKA  242 (332)
T ss_pred             cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhH
Confidence               12346889999999887644345669999999999999999999987554332222211100           00  


Q ss_pred             --------ccc---C-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          134 --------QYK---I-PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       134 --------~~~---~-~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                              ...   . ......+..+.+|+.+||..+|.+|||+.+++.||||.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         243 QNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence                    000   0 0112357889999999999999999999999999999654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=2.9e-30  Score=216.66  Aligned_cols=172  Identities=24%  Similarity=0.323  Sum_probs=128.9

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||+.+.+|.+++....           ++.+++.++.|||+++++||||+|+||+++.++.  ++|+|||+++...... 
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~--~~l~df~~~~~~~~~~~  154 (283)
T cd07835          77 FEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGA--LKLADFGLARAFGVPVR  154 (283)
T ss_pred             EeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCc--EEEeecccccccCCCcc
Confidence            5777778888876654           3567889999999999999999999999988665  9999999986443222 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh--------------c
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------------Q  134 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------~  134 (265)
                      ......++..|+|||++.+......++|+||||+++|+|++|+.||...................              .
T Consensus       155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK  234 (283)
T ss_pred             ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence            11233568899999988765444556999999999999999999998765443333322211000              0


Q ss_pred             ccC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKI---------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~---------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...         .....++..+.++|.+||..+|.+|||+.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            000         0123467899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=3.1e-30  Score=214.58  Aligned_cols=166  Identities=28%  Similarity=0.385  Sum_probs=127.4

Q ss_pred             Cccccc-chHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++...         .++.+++.++.|||++|++||||+|+||+++.++.  ++|+|||+++......  
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~  162 (267)
T cd06628          85 LEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGG--IKISDFGISKKLEANSLS  162 (267)
T ss_pred             EEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCC--EEecccCCCccccccccc
Confidence            566644 788777653         24677889999999999999999999999987765  9999999987543211  


Q ss_pred             -----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 -----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                           ......++..|+|||.+.+..+. .++|+|||||++|+|++|+.||...........    +.. ......+..+
T Consensus       163 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~~  236 (267)
T cd06628         163 TKTNGARPSLQGSVFWMAPEVVKQTSYT-RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK----IGE-NASPEIPSNI  236 (267)
T ss_pred             CCccccccccCCCcCccChhHhccCCCC-chhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH----Hhc-cCCCcCCccc
Confidence                 11223578899999999877665 448999999999999999999987544322221    111 1112223357


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +..+.++|.+||..+|.+||++.++++||||
T Consensus       237 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         237 SSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            8999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=3.2e-30  Score=218.96  Aligned_cols=171  Identities=22%  Similarity=0.361  Sum_probs=126.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||+++++|.+++..+.          ++.+++.++.|||++||+|+||||+||+++.++.  +||+|||++........ 
T Consensus        98 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~~~~  175 (310)
T cd07865          98 FEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGI--LKLADFGLARAFSLSKNS  175 (310)
T ss_pred             EcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCc--EEECcCCCcccccCCccc
Confidence            6888888877766442          3677899999999999999999999999987765  99999999875433221 


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-----------
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-----------  134 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-----------  134 (265)
                          .....++..|+|||.+.+....+.++|+||||+++|+|++|+.||.......... .+..+....           
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  254 (310)
T cd07865         176 KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLT-LISQLCGSITPEVWPGVDKL  254 (310)
T ss_pred             CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCChhhcccccch
Confidence                1233577889999998765544556999999999999999999997765432221 121111000           


Q ss_pred             -----ccCCC-----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 -----YKIPD-----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 -----~~~~~-----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                           ...+.           ....+..+.+||.+||..||.+|||+.++++||||
T Consensus       255 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         255 ELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                 00000           00135678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.2e-30  Score=244.54  Aligned_cols=172  Identities=23%  Similarity=0.315  Sum_probs=131.1

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhc-------CceecCCCcCcEEEcCC-----------
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQ-------QICHRDLKLENTLLDGS-----------   48 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~-------~ivH~dlkp~NIll~~~-----------   48 (265)
                      |||+.+ +|.+++...             .++.+|+.+|.|||+.       +||||||||+||||+..           
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            788876 899888642             2367889999999984       59999999999999642           


Q ss_pred             ----CCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCC-cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHH
Q 024572           49 ----PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR-EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF  123 (265)
Q Consensus        49 ----~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~  123 (265)
                          +.+.+||+|||++.............+|+.|+|||++.+. ...+.++|||||||++|+|++|+.||........+
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~ql  252 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQL  252 (1021)
T ss_pred             cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHH
Confidence                2234899999999765444444455799999999998653 22345699999999999999999999876544333


Q ss_pred             HHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...+.   . ....+ ....+.++.+||.+||..+|.+||++.++|.|+|++..
T Consensus       253 i~~lk---~-~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        253 ISELK---R-GPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             HHHHh---c-CCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            22221   1 11122 23468899999999999999999999999999999744

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.97  E-value=2.1e-30  Score=218.85  Aligned_cols=173  Identities=28%  Similarity=0.466  Sum_probs=131.2

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.+++...        .++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++....... ..
T Consensus        98 ~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~--~kL~dfg~~~~~~~~~~~~  175 (292)
T cd06658          98 MEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKR  175 (292)
T ss_pred             EeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--EEEccCcchhhcccccccC
Confidence            677765 787776432        23677889999999999999999999999987765  9999999986433222 22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..++ .++|+||||+++|+|++|+.||........... +..  ......+....++..+.++
T Consensus       176 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~l  251 (292)
T cd06658         176 KSLVGTPYWMAPEVISRLPYG-TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRD--NLPPRVKDSHKVSSVLRGF  251 (292)
T ss_pred             ceeecCccccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh--cCCCccccccccCHHHHHH
Confidence            334688999999999776665 459999999999999999999987554332221 111  1111222333578899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..+|.+|||+.++++||||...-+
T Consensus       252 i~~~l~~~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         252 LDLMLVREPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             HHHHccCChhHCcCHHHHhhChhhhccCC
Confidence            99999999999999999999999985443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.97  E-value=2.2e-30  Score=222.08  Aligned_cols=174  Identities=17%  Similarity=0.263  Sum_probs=123.6

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+           .++.+++.+|.|||++||+||||||+|||++.++.  ++++||+.+.......
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~--~~l~~~~~~~~~~~~~  155 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK--VYLSGLRSNLSMINHG  155 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCc--EEEcccchhhcccccc
Confidence            577764 888887542           23567889999999999999999999999987765  9999998654322111


Q ss_pred             --------CCCCCcCCCCCcccccccCC--cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-----
Q 024572           69 --------RPKSTVGTPAYIAPEVLSRR--EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-----  133 (265)
Q Consensus        69 --------~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----  133 (265)
                              ......++..|+|||++.+.  .+ +.++|||||||++|+|++|+.||...................     
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (327)
T cd08227         156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTT  234 (327)
T ss_pred             ccccccccccccccceecccChHHhhcccCCC-CchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccccc
Confidence                    11223467789999998763  34 455999999999999999999997654332222111100000     


Q ss_pred             -----c------------------------------ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          134 -----Q------------------------------YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       134 -----~------------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                           .                              ...+....+++.+.+||.+||..||.+|||+.++++||||++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                 0                              0001112356789999999999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-30  Score=221.43  Aligned_cols=172  Identities=23%  Similarity=0.311  Sum_probs=124.9

Q ss_pred             CcccccchHHHHHHh--------------ccccchHHHHHhhhhcCceecCCCcCcEEEcC----CCCCcEEEeccCCcc
Q 024572            1 MQLGVSSLSEFVMLE--------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDG----SPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~----~~~~~vkl~Dfg~a~   62 (265)
                      ||+++++|.+++...              .++.+++.++.|||+++|+||||||+||+++.    ++.  +||+|||+++
T Consensus        83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~--~kl~Dfg~~~  160 (316)
T cd07842          83 FDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGV--VKIGDLGLAR  160 (316)
T ss_pred             EeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccce--EEECCCcccc
Confidence            688888777766422              24567899999999999999999999999987    554  9999999987


Q ss_pred             cCCCCCC----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH---------HHHHHHHH
Q 024572           63 SSLLHSR----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK---------NFRKTISR  129 (265)
Q Consensus        63 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~---------~~~~~~~~  129 (265)
                      .......    .....++..|+|||.+.+....+.++|+|||||++|+|++|+.||.......         .+...+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T cd07842         161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV  240 (316)
T ss_pred             ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence            5433221    2234578899999998765544566999999999999999999997654322         11111110


Q ss_pred             Hhhh-------------------cccCCCC------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          130 IMAV-------------------QYKIPDY------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       130 ~~~~-------------------~~~~~~~------------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +...                   .......            ...+..+.++|.+||..||++|||+.++++||||
T Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            0000                   0000001            1456789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=1.3e-30  Score=224.17  Aligned_cols=176  Identities=25%  Similarity=0.311  Sum_probs=130.2

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~-   70 (265)
                      ||+++++|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++........ 
T Consensus        87 ~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~  164 (334)
T cd07855          87 MDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCE--LRIGDFGMARGLSSSPTEH  164 (334)
T ss_pred             EehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc--EEecccccceeecccCcCC
Confidence            6788788888775443         3567899999999999999999999999998776  999999998654322211 


Q ss_pred             ----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh---------------
Q 024572           71 ----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM---------------  131 (265)
Q Consensus        71 ----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------  131 (265)
                          ....++..|+|||.+.+....+.++|+|||||++|+|++|+.||........+........               
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  244 (334)
T cd07855         165 KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRV  244 (334)
T ss_pred             CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhH
Confidence                2346888999999986644345669999999999999999999977654332221111100               


Q ss_pred             ----h-hcccCC-----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          132 ----A-VQYKIP-----DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       132 ----~-~~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                          . .....+     .....+..++++|.+||..+|.+|||+.+++.||||.+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         245 RKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             HHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence                0 000000     0124688999999999999999999999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.97  E-value=3.5e-30  Score=217.92  Aligned_cols=171  Identities=25%  Similarity=0.393  Sum_probs=130.2

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||++.+ +|.+++....        .+.+++.++.|||++||+||||||+||+++.++.  +||+|||++........ .
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~--~kl~dfg~~~~~~~~~~~~  172 (296)
T cd06655          95 MEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS--VKLTDFGFCAQITPEQSKR  172 (296)
T ss_pred             EEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEccCccchhcccccccC
Confidence            455544 7877766433        3566888999999999999999999999987765  99999999875433222 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..+. .++|+|||||++|+|++|+.||.............   .........+..+++.+.++
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l  248 (296)
T cd06655         173 STMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSPIFRDF  248 (296)
T ss_pred             CCcCCCccccCcchhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCcccCCcccCCHHHHHH
Confidence            234688899999999877665 45999999999999999999998765433222111   11111222344678999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |.+||..+|.+|||+.+++.||||+..
T Consensus       249 i~~~l~~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         249 LNRCLEMDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             HHHHhhcChhhCCCHHHHhhChHhhhc
Confidence            999999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.97  E-value=1.3e-30  Score=216.47  Aligned_cols=172  Identities=26%  Similarity=0.419  Sum_probs=130.1

Q ss_pred             Ccccc-cchHHHHHHh----------ccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE----------GSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. .+|.+++...          .++.+++.++.|||+ .|++|+||||+||+++.++.  ++|+|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~--~~l~d~g~~~~~~~~~  155 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQ--IKLCDFGVSGQLVNSL  155 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCC--EEEeecccchhhHHHH
Confidence            56777 5888888754          246678899999999 99999999999999998765  9999999886443222


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC-hHHHHHHHHHHhhhcccCCCCCC-CCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED-PKNFRKTISRIMAVQYKIPDYVH-ISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~  146 (265)
                      . ....++..|+|||.+.+..+. .++|+||||+++|+|++|+.||..... .......+........ ...+.. ++..
T Consensus       156 ~-~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  232 (265)
T cd06605         156 A-KTFVGTSSYMAPERIQGNDYS-VKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-PRLPSGKFSPD  232 (265)
T ss_pred             h-hcccCChhccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-CCCChhhcCHH
Confidence            2 226688899999999887665 459999999999999999999976521 1122222332222211 111112 7889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +.++|.+||..+|.+|||+.+++.||||++.
T Consensus       233 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         233 FQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            9999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=8.8e-31  Score=226.04  Aligned_cols=176  Identities=23%  Similarity=0.304  Sum_probs=132.3

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++.+|.+++....        ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.....  ....
T Consensus        99 ~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~--~kL~dfg~~~~~~~--~~~~  174 (343)
T cd07851          99 THLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--LKILDFGLARHTDD--EMTG  174 (343)
T ss_pred             EecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC--EEEccccccccccc--cccC
Confidence            5777788888775432        4677899999999999999999999999988765  99999999875432  2334


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------------
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------------  133 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  133 (265)
                      ..++..|+|||.+.+....+.++|+|||||++|++++|+.||........+..+.......                   
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07851         175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQS  254 (343)
T ss_pred             CcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHh
Confidence            5678899999998764444566999999999999999999998765443333222211000                   


Q ss_pred             cccC------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          134 QYKI------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       134 ~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ....      .....++..+.+||.+||..+|.+|||+.+|++||||.+....
T Consensus       255 ~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         255 LPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             ccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence            0000      0112358899999999999999999999999999999865443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.97  E-value=2.7e-30  Score=213.42  Aligned_cols=168  Identities=24%  Similarity=0.373  Sum_probs=127.6

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||+.||+||||+|+||+++.++.  +||+|||++....... 
T Consensus        77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~--~~l~dfg~~~~~~~~~~  154 (256)
T cd06612          77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQ--AKLADFGVSGQLTDTMA  154 (256)
T ss_pred             EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCc--EEEcccccchhcccCcc
Confidence            466665 7888775432          4667889999999999999999999999988775  9999999987544332 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||.+.+..++ .++||||||+++|+|++|+.||.............   ............++..+.
T Consensus       155 ~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  230 (256)
T cd06612         155 KRNTVIGTPFWMAPEVIQEIGYN-NKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP---NKPPPTLSDPEKWSPEFN  230 (256)
T ss_pred             ccccccCCccccCHHHHhcCCCC-chhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc---cCCCCCCCchhhcCHHHH
Confidence            22334578899999999877665 45999999999999999999997654322211110   011111122234678999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ++|.+||..+|.+|||+.+++.||||
T Consensus       231 ~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         231 DFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=1.7e-30  Score=217.89  Aligned_cols=171  Identities=24%  Similarity=0.437  Sum_probs=128.7

Q ss_pred             CcccccchHHHHHHh-------------ccccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVMLE-------------GSVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~~-------------~~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||+++++|.+++...             .++.+++.++.|||++ +++||||||+||+++.++.  +||+|||++.....
T Consensus        79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~--~kl~dfg~~~~~~~  156 (283)
T cd06617          79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQ--VKLCDFGISGYLVD  156 (283)
T ss_pred             hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC--EEEeeccccccccc
Confidence            678888887776542             2356788999999997 9999999999999988765  99999999875443


Q ss_pred             CCCCCCCcCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHHHHHhhhcccCCCCC
Q 024572           67 HSRPKSTVGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~  141 (265)
                      ........++..|+|||.+.+    ..+ +.++|+|||||++|+|++|+.||...... ......   ........+ ..
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~-~~  231 (283)
T cd06617         157 SVAKTIDAGCKPYMAPERINPELNQKGY-DVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV---VEEPSPQLP-AE  231 (283)
T ss_pred             ccccccccCCccccChhhcCCccccccc-CccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH---HhcCCCCCC-cc
Confidence            333333568889999998865    223 34589999999999999999999654322 221111   111111122 12


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .++.++.++|.+||..+|.+||++.++++||||.+..
T Consensus       232 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         232 KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            4789999999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.97  E-value=4.5e-30  Score=216.52  Aligned_cols=166  Identities=30%  Similarity=0.496  Sum_probs=132.3

Q ss_pred             Cccc-ccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++ +++|.+++....         ++.+++.+|.|||++||+||||+|.||+++.++.  +||+|||+++.....  .
T Consensus        80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~--~kl~dfg~~~~~~~~--~  155 (290)
T cd05580          80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGY--IKITDFGFAKRVKGR--T  155 (290)
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC--EEEeeCCCccccCCC--C
Confidence            6888 669998887654         3567899999999999999999999999988765  999999998754433  3


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||.+.+.... .++|+||||+++|+|++|+.||.......    ....+.......  +..++..++++
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~--~~~~~~~l~~l  228 (290)
T cd05580         156 YTLCGTPEYLAPEIILSKGYG-KAVDWWALGILIYEMLAGYPPFFDDNPIQ----IYEKILEGKVRF--PSFFSPDAKDL  228 (290)
T ss_pred             CCCCCCccccChhhhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcCCccC--CccCCHHHHHH
Confidence            345688999999998776654 55999999999999999999997765322    222222222223  33578999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |.+||..+|.+|+     ++.++++||||...
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         229 IRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             HHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence            9999999999999     99999999999654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=4.5e-30  Score=215.33  Aligned_cols=172  Identities=26%  Similarity=0.356  Sum_probs=130.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||+++|+||||||+||+++.++.  +||+|||++...... ..
T Consensus        76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~--~kl~dfg~~~~~~~~-~~  152 (278)
T cd05606          76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-KP  152 (278)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC--EEEccCcCccccCcc-CC
Confidence            577654 7887775443         4667889999999999999999999999987765  999999998644322 22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+....+.++|+||+||++|+|++|+.||........ ..............  +..++..+.++
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~--~~~~s~~~~~l  229 (278)
T cd05606         153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVEL--PDSFSPELRSL  229 (278)
T ss_pred             cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-HHHHHHhhccCCCC--CCcCCHHHHHH
Confidence            3457899999999987543334559999999999999999999976532211 11111112222222  23568999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKNL  178 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~~  178 (265)
                      +.+||..+|.+|+     ++.++++||||+...
T Consensus       230 i~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         230 LEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             HHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            9999999999999     999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=3.5e-30  Score=216.64  Aligned_cols=161  Identities=19%  Similarity=0.220  Sum_probs=125.2

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+..         +.+++.++.|||+ .+++||||||+|||++.++.  +||+|||+++....  .
T Consensus       101 ~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~--~kl~dfg~~~~~~~--~  176 (283)
T PHA02988        101 LEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYK--LKIICHGLEKILSS--P  176 (283)
T ss_pred             EEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCc--EEEcccchHhhhcc--c
Confidence            677776 89998875432         4467888999998 59999999999999998776  99999999875432  2


Q ss_pred             CCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .....++..|+|||++.+  ..+ +.++|||||||++|+|++|+.||........+.    .+.......+.+..++..+
T Consensus       177 ~~~~~~~~~y~aPE~~~~~~~~~-~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~----~i~~~~~~~~~~~~~~~~l  251 (283)
T PHA02988        177 PFKNVNFMVYFSYKMLNDIFSEY-TIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYD----LIINKNNSLKLPLDCPLEI  251 (283)
T ss_pred             cccccCcccccCHHHhhhccccc-cchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhcCCCCCCCCcCcHHH
Confidence            234568899999999976  444 455999999999999999999998765433222    2222223333334688999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++||.+||+.||.+|||+.++++
T Consensus       252 ~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        252 KCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHHHHHHhcCCcccCcCHHHHHH
Confidence            99999999999999999999985

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.97  E-value=3e-30  Score=217.52  Aligned_cols=170  Identities=24%  Similarity=0.303  Sum_probs=126.1

Q ss_pred             Cccccc-chHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||+..+ +|.+++..             ..++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.....
T Consensus       103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~--~kl~dfg~~~~~~~  180 (291)
T cd06639         103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTS  180 (291)
T ss_pred             EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC--EEEeecccchhccc
Confidence            466644 88887652             113567889999999999999999999999987765  99999999875433


Q ss_pred             CC-CCCCCcCCCCCcccccccCCcC----CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC
Q 024572           67 HS-RPKSTVGTPAYIAPEVLSRREY----DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        67 ~~-~~~~~~~~~~y~aPE~~~~~~~----~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (265)
                      .. ......++..|+|||.+.....    .+.++|+|||||++|+|++|+.||..............   ..........
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~  257 (291)
T cd06639         181 TRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR---NPPPTLLHPE  257 (291)
T ss_pred             ccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc---CCCCCCCccc
Confidence            22 2233468889999999864321    24559999999999999999999987544333222111   1111122233


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      .++..+.+||.+||..+|++||++.++++||||+
T Consensus       258 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         258 KWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            4677899999999999999999999999999994

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=239.93  Aligned_cols=169  Identities=26%  Similarity=0.403  Sum_probs=130.8

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcC---CCCCcEEEeccCCcccC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDG---SPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~---~~~~~vkl~Dfg~a~~~   64 (265)
                      .|+|.++|.|++..             +..++|++.++.|||+.+||||||||.||||..   ++..+++|+|||+|+..
T Consensus       582 lELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  582 LELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             ehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            48999999999988             234788999999999999999999999999976   45557999999999876


Q ss_pred             CCCCC----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHHHHHhhhcccCCC
Q 024572           65 LLHSR----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG-AYPFEDQEDPKNFRKTISRIMAVQYKIPD  139 (265)
Q Consensus        65 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  139 (265)
                      .....    .....||..|+|||++...... +++||||+||++|+.++| .+||......+  .++    ....+..-.
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~-~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NI----l~~~~~L~~  734 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKT-QAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANI----LTGNYTLVH  734 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHhccccC-cccchhhcCceEEEEecCCccCCCchHHhh--hhh----hcCccceee
Confidence            55433    2334699999999999876654 469999999999999996 89997643211  122    222221111


Q ss_pred             CC-CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          140 YV-HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       140 ~~-~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .. ....++.+||.+||.++|..||+|.++|.||||-.
T Consensus       735 L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  735 LEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             eccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence            00 01128899999999999999999999999999964

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=2.2e-30  Score=223.00  Aligned_cols=174  Identities=25%  Similarity=0.317  Sum_probs=128.7

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCC
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~   70 (265)
                      ||+++++|.+++...+         ++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++..... ...
T Consensus        88 ~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~--~kL~Dfg~~~~~~~~~~~~  165 (337)
T cd07858          88 YELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD--LKICDFGLARTTSEKGDFM  165 (337)
T ss_pred             EeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC--EEECcCccccccCCCcccc
Confidence            5788888887775433         3667899999999999999999999999987765  999999998754433 222


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH-------------------h
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI-------------------M  131 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------------------~  131 (265)
                      ....++..|+|||.+.+....+.++|+|||||++|+|++|+.||.+..............                   .
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (337)
T cd07858         166 TEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYI  245 (337)
T ss_pred             cccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHH
Confidence            344678899999988754334456999999999999999999997654322111111000                   0


Q ss_pred             hhcccC------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          132 AVQYKI------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       132 ~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ......      .....++..+.+||.+||..+|.+|||+.++++||||..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         246 RSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             HhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            000000      012357889999999999999999999999999999964

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.97  E-value=1.2e-29  Score=214.01  Aligned_cols=172  Identities=24%  Similarity=0.330  Sum_probs=126.2

Q ss_pred             Cccccc-chHHHHHH----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-C
Q 024572            1 MQLGVS-SLSEFVML----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-S   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~   68 (265)
                      ||++.+ +|..++..          ..++.+++.++.|||++||+||||||+||+++.++.  +||+|||++...... .
T Consensus        88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~~~  165 (292)
T cd06644          88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD--IKLADFGVSAKNVKTLQ  165 (292)
T ss_pred             EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCC--EEEccCccceecccccc
Confidence            567766 56655432          224777889999999999999999999999987665  999999988643222 1


Q ss_pred             CCCCCcCCCCCcccccccCC----cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 RPKSTVGTPAYIAPEVLSRR----EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ......++..|+|||.+.+.    ...+.++|+|||||++|+|++|..||.............   ............++
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  242 (292)
T cd06644         166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA---KSEPPTLSQPSKWS  242 (292)
T ss_pred             ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHh---cCCCccCCCCcccC
Confidence            22334688899999998532    112345999999999999999999997654322221111   11111222334678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .++.++|.+||..+|++||++.++++||||...
T Consensus       243 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         243 MEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            899999999999999999999999999999754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=3.7e-30  Score=214.20  Aligned_cols=166  Identities=26%  Similarity=0.421  Sum_probs=125.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++++ +|.+++...+         .+.+++.++.|||++||+|+||||+||+++.++.  +||+|||++....... .
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~--~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH--VKLADFGVSAQITATIAK  162 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEECcceeeeEccCcccc
Confidence            678765 8998876543         3667889999999999999999999999987765  9999999986443221 2


Q ss_pred             CCCCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC---CCCCC
Q 024572           70 PKSTVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP---DYVHI  143 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  143 (265)
                      .....++..|+|||++.   ...+ +.++|+|||||++|+|++|..||............    .......+   ....+
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~-~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  237 (267)
T cd06645         163 RKSFIGTPYWMAPEVAAVERKGGY-NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM----TKSNFQPPKLKDKMKW  237 (267)
T ss_pred             cccccCcccccChhhhccccCCCC-CchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh----hccCCCCCcccccCCC
Confidence            23446899999999974   2334 45699999999999999999999765432222111    11111111   22246


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      +..+.++|.+||..+|++|||+.++++|||
T Consensus       238 ~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         238 SNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.97  E-value=4.5e-30  Score=212.10  Aligned_cols=166  Identities=25%  Similarity=0.371  Sum_probs=128.7

Q ss_pred             Ccccc-cchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  ++|+|||+++......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~--~~l~df~~~~~~~~~~  155 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN--VKIGDLGVAKLLSDNT  155 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCC--EEEcccccceeccCcc
Confidence            57764 5899988764           23567889999999999999999999999987765  9999999987544332


Q ss_pred             C-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 R-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      . .....++..|+|||++.+..++ .++|+|||||++|+|++|+.||.........    ..+..... .+....++..+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~  229 (256)
T cd08529         156 NFANTIVGTPYYLSPELCEDKPYN-EKSDVWALGVVLYECCTGKHPFDANNQGALI----LKIIRGVF-PPVSQMYSQQL  229 (256)
T ss_pred             chhhccccCccccCHHHhcCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCC-CCCccccCHHH
Confidence            2 2234688899999999887765 4599999999999999999999776532222    22222111 12222578899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++|.+||..+|++||++.++++|||+
T Consensus       230 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         230 AQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-30  Score=215.94  Aligned_cols=169  Identities=25%  Similarity=0.343  Sum_probs=126.2

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++....             ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||++.....
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~--~~l~d~~~~~~~~~  165 (275)
T cd06608          88 MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAE--VKLVDFGVSAQLDS  165 (275)
T ss_pred             EEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCe--EEECCCccceeccc
Confidence            567765 7888776532             4667899999999999999999999999988765  99999999864332


Q ss_pred             C-CCCCCCcCCCCCcccccccCCc----CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC
Q 024572           67 H-SRPKSTVGTPAYIAPEVLSRRE----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        67 ~-~~~~~~~~~~~y~aPE~~~~~~----~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (265)
                      . .......++..|+|||.+....    ..+.++|||||||++|+|++|+.||..............   ..........
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~  242 (275)
T cd06608         166 TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR---NPPPTLKSPE  242 (275)
T ss_pred             chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc---cCCCCCCchh
Confidence            2 2223456888999999875422    223458999999999999999999976543332222211   1111222222


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++..+++||.+||..||.+|||+.++++|||+
T Consensus       243 ~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         243 NWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            467899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.4e-30  Score=213.63  Aligned_cols=167  Identities=31%  Similarity=0.472  Sum_probs=128.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||+++....   .
T Consensus        76 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~---~  150 (260)
T cd05611          76 MEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGH--LKLTDFGLSRNGLE---N  150 (260)
T ss_pred             EeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc--EEEeecccceeccc---c
Confidence            577755 8888876533         3677899999999999999999999999987765  99999998864332   2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDCR  148 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  148 (265)
                      ....++..|+|||.+.+..+. .++|+||||+++|+|++|..||........+..    ......  .......++..+.
T Consensus       151 ~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  225 (260)
T cd05611         151 KKFVGTPDYLAPETILGVGDD-KMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDN----ILSRRINWPEEVKEFCSPEAV  225 (260)
T ss_pred             ccCCCCcCccChhhhcCCCCc-chhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhcccCCCCcccccCCHHHH
Confidence            344688899999999877654 559999999999999999999977654332222    222221  1122235789999


Q ss_pred             HHHHHhcccCCCCCCC---HHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRIT---IKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s---~~ell~h~~f~~~  177 (265)
                      ++|.+||..+|++||+   +.+++.||||++.
T Consensus       226 ~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         226 DLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            9999999999999995   5799999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=5.4e-30  Score=215.92  Aligned_cols=172  Identities=24%  Similarity=0.366  Sum_probs=125.3

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... .
T Consensus        82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~~~~  159 (291)
T cd07844          82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE--LKLADFGLARAKSVPSKT  159 (291)
T ss_pred             EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC--EEECccccccccCCCCcc
Confidence            6888888888776532          2567899999999999999999999999988776  9999999986432221 1


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh----------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV----------------  133 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------  133 (265)
                      .....++..|+|||.+.+....+.++||||+|+++|+|++|+.||............+......                
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK  239 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence            1223467889999998764434556999999999999999999997655322211111111000                


Q ss_pred             cccCC---------CCCCCC--HHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          134 QYKIP---------DYVHIS--QDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       134 ~~~~~---------~~~~~~--~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ....+         ....++  ..+.++|.+||..+|.+|||+.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            00000         001233  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.4e-30  Score=214.88  Aligned_cols=168  Identities=31%  Similarity=0.559  Sum_probs=137.9

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      |||+.+ .|.--++.-+.         +..|+.+|.+||++|||+||||.+||+++..+.  |||+|||+++.... ...
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH--iKi~DFGmcKEni~~~~T  506 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIFDGVT  506 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc--eEeeecccccccccCCcc
Confidence            788877 77777776654         334778899999999999999999999998886  99999999985433 345


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ..+++||+.|+|||++...+| ++++|+||+|++||||+.|++||.+.+....+..+.    ......|  ..+|.++.+
T Consensus       507 TkTFCGTPdYiAPEIi~YqPY-gksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~----ehnvsyP--KslSkEAv~  579 (683)
T KOG0696|consen  507 TKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIM----EHNVSYP--KSLSKEAVA  579 (683)
T ss_pred             eeeecCCCcccccceEEeccc-ccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH----HccCcCc--ccccHHHHH
Confidence            567899999999999998887 466999999999999999999999987765555443    3333333  478999999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      +.+.+|.+.|.+|..     -.+|..||||+..
T Consensus       580 ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  580 ICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             HHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence            999999999999985     3679999999754

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=4.1e-30  Score=215.40  Aligned_cols=172  Identities=25%  Similarity=0.333  Sum_probs=130.6

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++..+          .++.+++.++.|||++||+|+||||+||+++.++.  ++|+|||.+....... .
T Consensus        77 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~--~~l~df~~~~~~~~~~~~  154 (283)
T cd05118          77 FEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGV--LKLADFGLARSFGSPVRP  154 (283)
T ss_pred             EeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCc--EEEeeeeeeEecCCCccc
Confidence            678888888877664          24677899999999999999999999999987765  9999999986554332 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc---------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ---------------  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---------------  134 (265)
                      .....++..|+|||.+.+....+.++|+||||+++|+|++|+.||........+...........               
T Consensus       155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd05118         155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK  234 (283)
T ss_pred             ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence            22345788999999988763445669999999999999999999987665444333322211100               


Q ss_pred             ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...+         ....++..++++|.+||..||.+||++.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            0000         012367889999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=5.7e-30  Score=214.75  Aligned_cols=172  Identities=22%  Similarity=0.316  Sum_probs=131.1

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+++++|.+++....           ++.+++.++.|||++||+|+||+|+||+++.++.  ++|+|||+++.......
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~--~~l~d~~~~~~~~~~~~  154 (283)
T cd07830          77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEV--VKIADFGLAREIRSRPP  154 (283)
T ss_pred             EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCC--EEEeecccceeccCCCC
Confidence            6888888888877653           3567889999999999999999999999998766  99999999876544444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh---------------hc
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA---------------VQ  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------~~  134 (265)
                      .....++..|+|||.+.+....+.++|+||||+++++|++|+.||..................               ..
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07830         155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG  234 (283)
T ss_pred             cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence            445568889999998865444455699999999999999999999876654443332221000               00


Q ss_pred             ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...+         .....+..+.++|.+||..+|.+|||+.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            0000         011236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=5.6e-30  Score=215.01  Aligned_cols=171  Identities=26%  Similarity=0.334  Sum_probs=130.3

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.++|.+++....           ++.+++.++.|||+++|+|+||+|+||+++.++.  +||+|||++........
T Consensus        85 ~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~--~~l~dfg~~~~~~~~~~  162 (287)
T cd07838          85 FEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQ--VKIADFGLARIYSFEMA  162 (287)
T ss_pred             ehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCC--EEEeccCcceeccCCcc
Confidence            5777777877765432           3667889999999999999999999999998865  99999999876544433


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-ccC-----------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKI-----------  137 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~-----------  137 (265)
                      .....++..|+|||.+.+..+.. ++|+|||||++|+|++|+.||........+........... ...           
T Consensus       163 ~~~~~~~~~~~~PE~~~~~~~~~-~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T cd07838         163 LTSVVVTLWYRAPEVLLQSSYAT-PVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSF  241 (287)
T ss_pred             cccccccccccChHHhccCCCCC-cchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhc
Confidence            33445788999999998877654 49999999999999999999987665554444433211100 000           


Q ss_pred             C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          138 P---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       138 ~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +         ....++..+.++|.+||..||.+||++.++++||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         242 PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             ccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            0         011345778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=6.5e-30  Score=214.92  Aligned_cols=173  Identities=27%  Similarity=0.418  Sum_probs=128.6

Q ss_pred             Cccccc-chHHHHHHh------------ccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE------------GSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~------------~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|..++...            .++.+++.++.|||+ +||+||||||+||+++.++.  +||+|||++.....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~  155 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQ--VKLCDFGVSGNLVA  155 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCC--EEEeecCCcccccC
Confidence            677766 777776652            235668889999996 69999999999999988665  99999999865432


Q ss_pred             CCCCCCCcCCCCCcccccccCCcC-----CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREY-----DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~-----~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (265)
                       .......++..|+|||.+.+...     .+.++|+|||||++|+|++|+.||......... ..+..+.... ....+.
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~-~~~~~~  232 (286)
T cd06622         156 -SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVDGD-PPTLPS  232 (286)
T ss_pred             -CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhhcC-CCCCCc
Confidence             22334467889999999865432     245599999999999999999999765433222 2222222211 122233


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .++.++.+||.+||..+|.+||++.++++||||...-
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             ccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            5889999999999999999999999999999997543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=5.7e-30  Score=213.13  Aligned_cols=167  Identities=29%  Similarity=0.377  Sum_probs=125.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||+++|+||||||+||+++.++.  +||+|||+++......  
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~  162 (266)
T cd06651          85 MEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRLQTICMS  162 (266)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC--EEEccCCCcccccccccc
Confidence            566654 8888876543         3677899999999999999999999999987765  9999999986443211  


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        ......++..|+|||.+.+..++ .++|+||+||++|+|++|+.||...........    ..........+..+++.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  237 (266)
T cd06651         163 GTGIRSVTGTPYWMSPEVISGEGYG-RKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK----IATQPTNPQLPSHISEH  237 (266)
T ss_pred             CCccccCCccccccCHHHhCCCCCC-chhhhHHHHHHHHHHHHCCCCccccchHHHHHH----HhcCCCCCCCchhcCHH
Confidence              11224578899999999876664 459999999999999999999986544332222    11111111122346788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ++++| +||..+|++||++.++++||||+
T Consensus       238 ~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         238 ARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            89998 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=9.5e-30  Score=214.50  Aligned_cols=172  Identities=24%  Similarity=0.331  Sum_probs=124.1

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++..+          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... .
T Consensus        82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~~  159 (291)
T cd07870          82 FEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGE--LKLADFGLARAKSIPSQT  159 (291)
T ss_pred             EecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCc--EEEeccccccccCCCCCC
Confidence            678877887776542          23667899999999999999999999999987765  9999999987433221 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHHHHh-----------hh-cc-
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF-RKTISRIM-----------AV-QY-  135 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~-----------~~-~~-  135 (265)
                      .....++..|+|||.+.+....+.++|+|||||++|+|++|+.||......... ........           .. .+ 
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK  239 (291)
T ss_pred             CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence            233457889999999876443345599999999999999999999765432211 11110000           00 00 


Q ss_pred             ----c--CC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          136 ----K--IP-------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       136 ----~--~~-------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                          .  .+       .....+..+.+++.+||..||.+|||+.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                0  00       001135688999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=5.7e-30  Score=216.18  Aligned_cols=175  Identities=23%  Similarity=0.272  Sum_probs=128.7

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||+++.+|.+++..+.           ++.+++.++.|||++||+||||+|+||+++..+. .+||+|||++....... 
T Consensus        80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~-~~kl~dfg~~~~~~~~~~  158 (294)
T PLN00009         80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-ALKLADFGLARAFGIPVR  158 (294)
T ss_pred             EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC-EEEEcccccccccCCCcc
Confidence            6777778877765432           3457899999999999999999999999985432 48999999986443221 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------------  134 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--------------  134 (265)
                      ......++..|+|||.+.+....+.++|+||+||++|+|++|+.||..........+.........              
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (294)
T PLN00009        159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK  238 (294)
T ss_pred             ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence            122345788999999987654445569999999999999999999987654443333222111000              


Q ss_pred             ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ...+         ....++..+.++|.+||..+|.+||++.++++||||..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence            0000         01246788999999999999999999999999999964

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=5.1e-30  Score=215.14  Aligned_cols=172  Identities=24%  Similarity=0.363  Sum_probs=129.9

Q ss_pred             CcccccchHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.++|.+++..+.            ++.+++.++.|||++||+||||||+||++++++.  ++|+|||++.......
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~--~~l~d~g~~~~~~~~~  154 (284)
T cd07836          77 FEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGE--LKLADFGLARAFGIPV  154 (284)
T ss_pred             EecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCc--EEEeecchhhhhcCCc
Confidence            6788888888876543            3677899999999999999999999999987765  9999999986443221


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh--------------
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------------  133 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------  133 (265)
                       ......++..|++||++.+....+.++|+|||||++|+|++|+.||.+.................              
T Consensus       155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07836         155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY  234 (284)
T ss_pred             cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence             12234578899999998765544566999999999999999999998776554433332211000              


Q ss_pred             cccCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          134 QYKIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       134 ~~~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ....+.         ...++..++++|.+||..||.+||++.++++||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            000000         11357789999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=6.4e-30  Score=216.15  Aligned_cols=148  Identities=16%  Similarity=0.150  Sum_probs=114.8

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--------CCCCCcCCCCCcccccccCC
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--------RPKSTVGTPAYIAPEVLSRR   88 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--------~~~~~~~~~~y~aPE~~~~~   88 (265)
                      ++.+++.++.|||+++|+||||||+|||++.++.  ++|+|||+|+......        ......||+.|+|||++.+.
T Consensus       131 i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~--~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~  208 (294)
T PHA02882        131 IMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNR--GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA  208 (294)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCc--EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC
Confidence            5778999999999999999999999999987665  9999999987543211        11234699999999999887


Q ss_pred             cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHH-----HHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 024572           89 EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRK-----TISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI  163 (265)
Q Consensus        89 ~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  163 (265)
                      .++ .++|||||||++|+|++|+.||.+.........     .+.++.....   ....++..+.+++..||..+|.+||
T Consensus       209 ~~~-~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp  284 (294)
T PHA02882        209 CVT-RRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKP  284 (294)
T ss_pred             CCC-cHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCC
Confidence            775 559999999999999999999987643332221     1222222222   2234688999999999999999999


Q ss_pred             CHHHHhc
Q 024572          164 TIKEIKS  170 (265)
Q Consensus       164 s~~ell~  170 (265)
                      ++.++++
T Consensus       285 ~~~~l~~  291 (294)
T PHA02882        285 DYDALIK  291 (294)
T ss_pred             CHHHHHH
Confidence            9999875

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.97  E-value=6.1e-30  Score=215.25  Aligned_cols=172  Identities=30%  Similarity=0.483  Sum_probs=130.3

Q ss_pred             Ccccc-cchHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGV-SSLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++. .+|.+++...        .++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||++....... ..
T Consensus        95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~~l~d~g~~~~~~~~~~~~  172 (285)
T cd06648          95 MEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR--VKLSDFGFCAQVSKEVPRR  172 (285)
T ss_pred             EeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCc--EEEcccccchhhccCCccc
Confidence            45554 4888876542        24677899999999999999999999999987765  9999999876433221 12


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-ccCCCCCCCCHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKIPDYVHISQDCRN  149 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  149 (265)
                      ....++..|+|||.+.+..+.. ++|+||||+++|+|++|+.||..........    .+.... ........++..+.+
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~-~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~  247 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYGT-EVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK----RIRDNLPPKLKNLHKVSPRLRS  247 (285)
T ss_pred             ccccCCccccCHHHhcCCCCCC-cccHHHHHHHHHHHHhCCCCCcCCCHHHHHH----HHHhcCCCCCcccccCCHHHHH
Confidence            2346889999999998776654 4999999999999999999997754332222    222111 112222347889999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      +|.+||..+|.+|||+.++++|+||++..+
T Consensus       248 li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         248 FLDRMLVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             HHHHHcccChhhCcCHHHHccCcccccCCC
Confidence            999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.97  E-value=9.9e-30  Score=210.06  Aligned_cols=167  Identities=30%  Similarity=0.428  Sum_probs=129.7

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||+..+ +|.+++..+.           ++.+++.++.|||++||+||||+|+||+++.++. .+||+|||++.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM-VVKIGDFGISKILSSKS  156 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEccCCCceecCCCc
Confidence            567754 8888886542           2557888999999999999999999999975543 48999999987655444


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||.+.+..++ .++|+||||+++|+|++|+.||............    .... ..+....++..+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~l~  230 (256)
T cd08220         157 KAYTVVGTPCYISPELCEGKPYN-QKSDIWALGCVLYELASLKRAFEAANLPALVLKI----MSGT-FAPISDRYSPDLR  230 (256)
T ss_pred             cccccccCCcccCchhccCCCCC-cccchHHHHHHHHHHHhCCCCcccCchHHHHHHH----HhcC-CCCCCCCcCHHHH
Confidence            44445688899999999876654 4599999999999999999999776543322222    1111 1222335789999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +++.+||..+|.+|||+.++++||||
T Consensus       231 ~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         231 QLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHHHHccCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=8.6e-30  Score=219.08  Aligned_cols=176  Identities=24%  Similarity=0.286  Sum_probs=132.7

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC----
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH----   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~----   67 (265)
                      ||++.++|.+++..+.         ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||.++.....    
T Consensus        99 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~--~kl~dfg~~~~~~~~~~~~  176 (335)
T PTZ00024         99 MDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI--CKIADFGLARRYGYPPYSD  176 (335)
T ss_pred             EeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC--EEECCccceeecccccccc
Confidence            6888888888886543         4677899999999999999999999999988765  999999998644311    


Q ss_pred             -----------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           68 -----------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        68 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                                 .......++..|+|||.+.+....+.++|+|||||++|+|++|+.||........+..+..........
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~  256 (335)
T PTZ00024        177 TLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNED  256 (335)
T ss_pred             cccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchh
Confidence                       111223467889999998775544566999999999999999999998776544443333221111000


Q ss_pred             -C------C---------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          137 -I------P---------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       137 -~------~---------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                       +      +               .....+..+.++|.+||..+|.+|||+.+++.||||+...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        257 NWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             hCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence             0      0               0123578899999999999999999999999999998653

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.5e-30  Score=213.89  Aligned_cols=172  Identities=24%  Similarity=0.346  Sum_probs=129.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++....... 
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~--~~l~d~g~~~~~~~~~~  158 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGD--VKLADFGVSAKNKSTLQ  158 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCC--EEEccCccchhhccccc
Confidence            677766 8888776532          4677899999999999999999999999987765  9999999876433221 


Q ss_pred             CCCCCcCCCCCcccccccCC----cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-ccCCCCCCC
Q 024572           69 RPKSTVGTPAYIAPEVLSRR----EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKIPDYVHI  143 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  143 (265)
                      ......++..|+|||.+...    ...+.++|+|||||++|+|++|+.||...........    +.... .....+..+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~  234 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLK----ILKSEPPTLDQPSKW  234 (280)
T ss_pred             ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHH----HhcCCCCCcCCcccC
Confidence            22334688899999997532    2223459999999999999999999977543322221    11111 112223357


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +..+.++|.+||..+|.+||++.++++||||.+..
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         235 SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence            88999999999999999999999999999998653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=4.6e-30  Score=220.98  Aligned_cols=174  Identities=28%  Similarity=0.319  Sum_probs=130.2

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC----
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS----   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~----   68 (265)
                      ||++.++|.+++....        ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++......    
T Consensus        88 ~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~--~kl~d~g~~~~~~~~~~~~~  165 (337)
T cd07852          88 FEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCR--VKLADFGLARSLSELEENPE  165 (337)
T ss_pred             ecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc--EEEeeccchhcccccccccc
Confidence            6788888887765432        4677899999999999999999999999998776  9999999987543322    


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh---------------
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM---------------  131 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------  131 (265)
                        ......++..|+|||.+.+....+.++|+||||+++|+|++|+.||.+...............               
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (337)
T cd07852         166 NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFA  245 (337)
T ss_pred             CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhH
Confidence              112345888999999887655445669999999999999999999977654433222211100               


Q ss_pred             ----h----hccc--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          132 ----A----VQYK--IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       132 ----~----~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                          .    ....  ......++..+.++|.+||..+|.+|||+.++++||||++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         246 ATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             HHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence                0    0000  0011236889999999999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=2.3e-30  Score=239.63  Aligned_cols=168  Identities=26%  Similarity=0.345  Sum_probs=125.0

Q ss_pred             CcccccchHHHHHHh-cc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC----
Q 024572            1 MQLGVSSLSEFVMLE-GS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL----   65 (265)
Q Consensus         1 me~~~~sL~~~~~~~-~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~----   65 (265)
                      ||||+.+|...+..+ ..          .++|++|+.|+|++|||||||||.||+++.+..  |||+|||+|+...    
T Consensus       675 MEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~--VKIGDFGLAt~~~~~~~  752 (1351)
T KOG1035|consen  675 MEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNS--VKIGDFGLATDLKENLE  752 (1351)
T ss_pred             HhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCC--eeecccccchhhhhhhh
Confidence            999999655444444 33          467999999999999999999999999997776  9999999986410    


Q ss_pred             ---------------CCCCCCCCcCCCCCcccccccCCc--CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH
Q 024572           66 ---------------LHSRPKSTVGTPAYIAPEVLSRRE--YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS  128 (265)
Q Consensus        66 ---------------~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~  128 (265)
                                     .....+..+||..|+|||++.+..  .+..|+|+||||+|++||+   .||...   .....++.
T Consensus       753 ~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~Ts---MERa~iL~  826 (1351)
T KOG1035|consen  753 SIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTS---MERASILT  826 (1351)
T ss_pred             hHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCch---HHHHHHHH
Confidence                           111234567999999999998755  2345599999999999998   456543   22234444


Q ss_pred             HHhhhcccCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          129 RIMAVQYKIPD--YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       129 ~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .+.....+.+.  +..--+.-..+|+.||+.||.+||||.++|++.||-.
T Consensus       827 ~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  827 NLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             hcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            44444444440  1122345578999999999999999999999999973

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-30  Score=210.40  Aligned_cols=176  Identities=30%  Similarity=0.535  Sum_probs=133.5

Q ss_pred             ccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCC-CCCcEEEeccCCcccCCCC-------
Q 024572            5 VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLH-------   67 (265)
Q Consensus         5 ~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~~~vkl~Dfg~a~~~~~~-------   67 (265)
                      +++|..-|..+.         .++-|+.+|.+||.+||.||||||+|||.... ....||||||.+.......       
T Consensus       160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas  239 (463)
T KOG0607|consen  160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS  239 (463)
T ss_pred             CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence            345555555443         37778999999999999999999999999543 3335899999886533222       


Q ss_pred             -CCCCCCcCCCCCccccccc----CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-----------HHHHHHHHHHh
Q 024572           68 -SRPKSTVGTPAYIAPEVLS----RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-----------KNFRKTISRIM  131 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-----------~~~~~~~~~~~  131 (265)
                       ....+.+|+..|||||++.    ...++.+++|.||||+|+|-|++|.+||.+.-..           .-.......+.
T Consensus       240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ  319 (463)
T KOG0607|consen  240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ  319 (463)
T ss_pred             CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence             1223457888999999863    2334467799999999999999999999764221           12234455566


Q ss_pred             hhcccCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          132 AVQYKIP--DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       132 ~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ...+.+|  +|..+|.+.++||+.+|..|+.+|.++.++++|||++.-.+.
T Consensus       320 EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  320 EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence            6677766  577899999999999999999999999999999999865443

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.97  E-value=9.2e-30  Score=211.62  Aligned_cols=168  Identities=22%  Similarity=0.295  Sum_probs=128.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC----
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL----   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~----   66 (265)
                      ||++.+ +|.+++....         .+.+++.++.|||+.||+|+||+|+||+++.++.  ++|+|||++.....    
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGI--IKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCe--EEeccchhhHhhhhcccc
Confidence            577755 8988886543         3567889999999999999999999999987765  99999999864321    


Q ss_pred             ---CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           67 ---HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        67 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                         ........++..|+|||.+.+..+. .++|+|||||++|+|++|..||.............   .......+....+
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~  234 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINESGYG-RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG---AHRGLMPRLPDSF  234 (265)
T ss_pred             ccccccccccCCCccccChhhhcCCCCc-chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh---hccCCCCCCCCCC
Confidence               1111234588899999999877665 45999999999999999999997654332221111   1111112233457


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +..+.++|.+||..+|.+||++.++++||||
T Consensus       235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            8999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.97  E-value=5.1e-30  Score=217.03  Aligned_cols=172  Identities=26%  Similarity=0.393  Sum_probs=130.2

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||+..+ +|.+++....        ++.+++.++.|||+.||+||||||+||+++.++.  ++|+|||++........ .
T Consensus        95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~--~~l~Dfg~~~~~~~~~~~~  172 (297)
T cd06656          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR  172 (297)
T ss_pred             ecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEECcCccceEccCCccCc
Confidence            577654 8888875432        3567889999999999999999999999987765  99999999865433222 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||.+.+..+. .++|+|||||++|++++|..||............   ..........+..++..+++|
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~-~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l  248 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNGTPELQNPERLSAVFRDF  248 (297)
T ss_pred             CcccCCccccCHHHHcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee---ccCCCCCCCCccccCHHHHHH
Confidence            234688899999999876664 5599999999999999999999765432221111   011111122334578889999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +.+||..+|.+||++.++++||||+...
T Consensus       249 i~~~l~~~p~~Rps~~~il~~~~~~~~~  276 (297)
T cd06656         249 LNRCLEMDVDRRGSAKELLQHPFLKLAK  276 (297)
T ss_pred             HHHHccCChhhCcCHHHHhcCchhcccc
Confidence            9999999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.3e-30  Score=212.40  Aligned_cols=169  Identities=24%  Similarity=0.314  Sum_probs=127.3

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++++ +|.+++...          .++.+++.++.|||++||+||||+|+||+++.++.  +||+|||++....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD--VKLADFGVSAQLTATIA  156 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCC--EEECccccchhhhhhhh
Confidence            677665 888877654          24777899999999999999999999999998765  9999999987543322 


Q ss_pred             CCCCCcCCCCCcccccccCC---cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RPKSTVGTPAYIAPEVLSRR---EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ......++..|+|||.+.+.   .++ .++|+|||||++|+|++|+.||................. ..........++.
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~-~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  234 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVERKGGYD-GKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNF-PPPKLKDKEKWSP  234 (262)
T ss_pred             ccccccCCccccCchhhcccccCCcC-chhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCccccchhhhhH
Confidence            22344688899999998765   554 459999999999999999999987654332222111100 0011112224577


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      ++.++|.+||..+|..|||+.+++.|+|
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         235 VFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            8999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=8.2e-30  Score=216.50  Aligned_cols=172  Identities=22%  Similarity=0.280  Sum_probs=125.8

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||+...+|.+++...          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++....... 
T Consensus        94 ~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~  171 (311)
T cd07866          94 TPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGI--LKIADFGLARPYDGPPPN  171 (311)
T ss_pred             EecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEECcCccchhccCCCcc
Confidence            466666666665532          24778899999999999999999999999988776  99999999864332211 


Q ss_pred             -----------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc----
Q 024572           70 -----------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ----  134 (265)
Q Consensus        70 -----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----  134 (265)
                                 .....+++.|+|||.+.+....+.++|||||||++|+|++|++||.+..................    
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (311)
T cd07866         172 PKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETW  251 (311)
T ss_pred             cccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence                       11224678899999987654345569999999999999999999987665444333322111000    


Q ss_pred             ------------c---cCC-----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 ------------Y---KIP-----DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ------------~---~~~-----~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                                  .   ..+     ....+++.+.++|.+||..+|.+|||+.+++.||||
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         252 PGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             hhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                        0   000     012345788999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.96  E-value=1.6e-29  Score=213.72  Aligned_cols=174  Identities=24%  Similarity=0.398  Sum_probs=129.0

Q ss_pred             CcccccchHHHHHH----------hccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVML----------EGSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~----------~~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+.+++|.++...          ..++.+++.++.|||+ +||+||||+|+||+++.++.  +||+|||++........
T Consensus        93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~--~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGN--VKLCDFGISGRLVDSKA  170 (296)
T ss_pred             eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCC--EEECccccchhccCCCc
Confidence            56776666665543          2357778999999997 69999999999999987765  99999999875443333


Q ss_pred             CCCCcCCCCCcccccccCCc---CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-cccCCCCCCCCH
Q 024572           70 PKSTVGTPAYIAPEVLSRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-QYKIPDYVHISQ  145 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~---~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  145 (265)
                      .....++..|+|||.+.+..   ..+.++|+||||+++|+|++|+.||.......   ..+..+... ....+....++.
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  247 (296)
T cd06618         171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF---EVLTKILQEEPPSLPPNEGFSP  247 (296)
T ss_pred             ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH---HHHHHHhcCCCCCCCCCCCCCH
Confidence            33445788999999987543   12345999999999999999999997643221   122222221 122233335788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      .+.+||.+||..+|.+||++.++++|+||.....
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence            9999999999999999999999999999976544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=234.55  Aligned_cols=162  Identities=27%  Similarity=0.467  Sum_probs=131.7

Q ss_pred             Ccccc-cchHHHHHHhcc-----------ccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGV-SSLSEFVMLEGS-----------VKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~~-----------~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||||. ++|-||+..|.-           ..++.+++.+||..+  |||||||-+||||..++.  .||||||.|.....
T Consensus       121 mEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~--~KLCDFGSatt~~~  198 (738)
T KOG1989|consen  121 MEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGN--YKLCDFGSATTKIL  198 (738)
T ss_pred             hhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCC--EEeCcccccccccC
Confidence            99999 599999996642           445678899999888  999999999999998886  99999999863322


Q ss_pred             CCCCC----------CCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh
Q 024572           67 HSRPK----------STVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        67 ~~~~~----------~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      .....          ...-|+.|+|||++-   +... +.|+|||+|||+||.|+....||......        .+...
T Consensus       199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI-~eKsDIWALGclLYkLCy~t~PFe~sg~l--------aIlng  269 (738)
T KOG1989|consen  199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPI-GEKSDIWALGCLLYKLCYFTTPFEESGKL--------AILNG  269 (738)
T ss_pred             CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCC-cchhHHHHHHHHHHHHHHhCCCcCcCcce--------eEEec
Confidence            22111          123689999999873   3444 45699999999999999999999876432        24567


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      .+.+|.+..++..+++||+.||..||.+||++-+++.+-+
T Consensus       270 ~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  270 NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF  309 (738)
T ss_pred             cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence            7888988899999999999999999999999999987644

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.96  E-value=5.2e-30  Score=221.16  Aligned_cols=175  Identities=21%  Similarity=0.272  Sum_probs=127.7

Q ss_pred             CcccccchHHHHHH--------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---
Q 024572            1 MQLGVSSLSEFVML--------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---   69 (265)
Q Consensus         1 me~~~~sL~~~~~~--------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---   69 (265)
                      ||+++++|.+++..        +.++.+++.++.|||++||+||||||+||+++..+. .+||+|||.++.......   
T Consensus        95 ~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~-~~kl~dfg~~~~~~~~~~~~~  173 (342)
T cd07854          95 QEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDL-VLKIGDFGLARIVDPHYSHKG  173 (342)
T ss_pred             eecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCc-eEEECCcccceecCCcccccc
Confidence            67787888777643        234678999999999999999999999999975432 489999999864422111   


Q ss_pred             -CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH------------------
Q 024572           70 -PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI------------------  130 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~------------------  130 (265)
                       .....++..|+|||.+.+....+.++|||||||++|+|++|+.||................                  
T Consensus       174 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
T cd07854         174 YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSF  253 (342)
T ss_pred             ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhh
Confidence             1223578899999987654444566999999999999999999997765433332222110                  


Q ss_pred             hh---hcccCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          131 MA---VQYKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       131 ~~---~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ..   .....+   ....++.++++||.+||..||.+|||+.+++.||||+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         254 VRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             hhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            00   000000   01246788999999999999999999999999999964

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=1.4e-29  Score=212.03  Aligned_cols=172  Identities=25%  Similarity=0.352  Sum_probs=129.9

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||+++++|.+++....          ++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||+++...... .
T Consensus        77 ~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~--~~l~d~g~~~~~~~~~~~  154 (282)
T cd07829          77 FEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGV--LKLADFGLARAFGIPLRT  154 (282)
T ss_pred             ecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCC--EEEecCCcccccCCCccc
Confidence            6788889998887652          3667889999999999999999999999988765  9999999987543322 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh--------------cc
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------------QY  135 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------~~  135 (265)
                      .....++..|+|||.+.+....+.++|+|||||++|++++|+.||........+..........              ..
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
T cd07829         155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP  234 (282)
T ss_pred             cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence            2233567789999998776344556999999999999999999998765544333332211000              00


Q ss_pred             cCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          136 KIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       136 ~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ..+         ....++..+.++|.+||..+|.+||++.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            001         111347789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.96  E-value=8.7e-30  Score=214.06  Aligned_cols=169  Identities=22%  Similarity=0.287  Sum_probs=125.6

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++...             ..+.+++.++.|||+++|+||||||+||+++.++.  +||+|||+++....
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~--~kl~dfg~~~~~~~  176 (286)
T cd06638          99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTS  176 (286)
T ss_pred             EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCC--EEEccCCceeeccc
Confidence            677754 888876521             14567889999999999999999999999988765  99999999875433


Q ss_pred             CC-CCCCCcCCCCCcccccccCC----cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC
Q 024572           67 HS-RPKSTVGTPAYIAPEVLSRR----EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        67 ~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (265)
                      .. ......++..|+|||++...    ...+.++|+||+||++|+|++|+.||.............   ...........
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~  253 (286)
T cd06638         177 TRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP---RNPPPTLHQPE  253 (286)
T ss_pred             CCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc---ccCCCcccCCC
Confidence            22 22334688999999998532    112455999999999999999999997654332222111   11111122223


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++..+.+||.+||..+|++|||+.++++|+||
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         254 LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            467889999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.96  E-value=1.5e-29  Score=209.14  Aligned_cols=168  Identities=29%  Similarity=0.395  Sum_probs=129.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         .+.+++.++.|||+.||+|+||+|+||+++.++.  +||+|||++.........
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~--~kl~d~~~~~~~~~~~~~  158 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGV--VKLADFGMAKQVVEFSFA  158 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEccCccceeccccccc
Confidence            567654 8888876544         3667889999999999999999999999987765  999999998754443333


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+......+.++|+|||||++|+|++|+.||...........    ..........+..++..+.++
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l  234 (258)
T cd06632         159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK----IGRSKELPPIPDHLSDEAKDF  234 (258)
T ss_pred             cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH----HHhcccCCCcCCCcCHHHHHH
Confidence            4556889999999987655234559999999999999999999977653222211    111111112233578999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCccc
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +.+||..+|.+||++.+++.|||+
T Consensus       235 i~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         235 ILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHHhhcCcccCcCHHHHhcCCCC
Confidence            999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=2.2e-30  Score=222.55  Aligned_cols=173  Identities=27%  Similarity=0.437  Sum_probs=128.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGH--IRLADFGSCLKMNQDGT  157 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCC--EEEEeccceeeccCCCc
Confidence            788754 8999887532          2567889999999999999999999999987765  99999999875433222


Q ss_pred             C--CCCcCCCCCcccccccCC----cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-CCC
Q 024572           70 P--KSTVGTPAYIAPEVLSRR----EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVH  142 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  142 (265)
                      .  ....|++.|+|||++.+.    ...+.++|+|||||++|+|++|+.||........+..+...  ......|. ...
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~  235 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH--EERFQFPSHITD  235 (331)
T ss_pred             eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC--CCcccCCCcccc
Confidence            1  234699999999998752    22245599999999999999999999876543333222211  11112222 235


Q ss_pred             CCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          143 ISQDCRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      ++..++++|.+||...+.+  |+++.++++|+||...
T Consensus       236 ~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         236 VSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             CCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            7899999999999876554  5689999999999753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=1.1e-29  Score=213.17  Aligned_cols=163  Identities=21%  Similarity=0.322  Sum_probs=125.3

Q ss_pred             Cccccc-chHHHHHHh-------------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLE-------------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++...                         .++.+++.++.|||++||+||||||+||+++.++.  +|
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~--~~  164 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT--VK  164 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc--EE
Confidence            566654 888888654                         24677899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++......   ......+++.|+|||.+.+..++ .++|||||||++|+|++ |..||.+.......    ..+
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~il~el~~~g~~p~~~~~~~~~~----~~i  239 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFT-TESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI----EMI  239 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHHhccCcCc-hhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH----HHH
Confidence            99999987433221   12233567889999998877765 45999999999999998 99999876543322    222


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .. ....+.+..++..+.+|+.+||..||.+||++.+++++
T Consensus       240 ~~-~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         240 RS-RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             Hc-CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            21 12223344689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-29  Score=213.03  Aligned_cols=172  Identities=23%  Similarity=0.336  Sum_probs=128.5

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||+...+|.+++...          .++.+++.++.|||++|++|+||+|+||+++.++.  +||+|||++.......  
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~--~~l~d~g~~~~~~~~~~~  156 (287)
T cd07840          79 FEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGV--LKLADFGLARPYTKRNSA  156 (287)
T ss_pred             eccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCC--EEEccccceeeccCCCcc
Confidence            567777777777654          24677899999999999999999999999998776  9999999987554332  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-ccCC---------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKIP---------  138 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~---------  138 (265)
                      ......++..|+|||.+.+....+.++||||||+++|+|++|+.||.................... ...+         
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07840         157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE  236 (287)
T ss_pred             cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhh
Confidence            122345678899999887654445669999999999999999999987665443333322111000 0000         


Q ss_pred             --------------CCCC-CCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          139 --------------DYVH-ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       139 --------------~~~~-~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                                    .... ++..+.++|.+||..+|.+||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                          0011 37889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.96  E-value=6.8e-30  Score=217.63  Aligned_cols=174  Identities=21%  Similarity=0.341  Sum_probs=124.9

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+           ..+.+++.++.|||++||+||||||+||+++.++.  +||+|||.+.......
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~--~kl~d~~~~~~~~~~~  155 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGK--VVLSGLRYSVSMIKHG  155 (314)
T ss_pred             EeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCc--eEEecCccceeecccc
Confidence            577764 788877643           23677899999999999999999999999987765  9999999876432211


Q ss_pred             C--------CCCCcCCCCCcccccccCC--cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-----
Q 024572           69 R--------PKSTVGTPAYIAPEVLSRR--EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-----  133 (265)
Q Consensus        69 ~--------~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----  133 (265)
                      .        .....++..|+|||++.+.  .+ +.++|+||+||++|+|++|+.||...................     
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (314)
T cd08216         156 KRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGY-NEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKS  234 (314)
T ss_pred             ccccccccccccccccccccCHHHhcCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccC
Confidence            1        1223467789999998763  34 355999999999999999999998754433222211100000     


Q ss_pred             -----------------------cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          134 -----------------------QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       134 -----------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                             ....+....++.++.+|+.+||..||++|||+.++++||||+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence                                   00000111234678899999999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.96  E-value=1.5e-29  Score=212.62  Aligned_cols=172  Identities=26%  Similarity=0.392  Sum_probs=126.7

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+++.+.+..+          ..+.+++.++.|||++||+||||+|+||+++.++.  +||+|||++.......  
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~--~kl~d~g~~~~~~~~~~~  156 (288)
T cd07833          79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGV--LKLCDFGFARALRARPAS  156 (288)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC--EEEEeeecccccCCCccc
Confidence            577777554443322          23667899999999999999999999999998765  9999999987554433  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc------------c-
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ------------Y-  135 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------~-  135 (265)
                      ......++..|+|||++.+....+.++|+||||+++|+|++|+.||....................            . 
T Consensus       157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07833         157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA  236 (288)
T ss_pred             cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence            223456788999999998873445669999999999999999999987654433222211100000            0 


Q ss_pred             --cCC-----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          136 --KIP-----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       136 --~~~-----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                        ..+           ....++..+++||++||..+|++|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence              000           011247889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=6.9e-30  Score=220.41  Aligned_cols=157  Identities=26%  Similarity=0.300  Sum_probs=118.7

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHh
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLAD   96 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D   96 (265)
                      ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++....  ......++..|+|||.+.+....+.++|
T Consensus       122 ~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~--~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~D  197 (342)
T cd07879         122 LVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCE--LKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVD  197 (342)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHH
Confidence            4677899999999999999999999999988765  99999999874322  2234467889999999876443455699


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh-------------------hhcccCC------CCCCCCHHHHHHH
Q 024572           97 VWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-------------------AVQYKIP------DYVHISQDCRNLL  151 (265)
Q Consensus        97 iwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~~~~~~~li  151 (265)
                      +|||||++|+|++|+.||.+......+...+....                   ......+      .....+..+.+||
T Consensus       198 v~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  277 (342)
T cd07879         198 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLL  277 (342)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHH
Confidence            99999999999999999987654333322221100                   0000000      0124678899999


Q ss_pred             HHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          152 SRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       152 ~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+||..||.+||++.+++.||||...
T Consensus       278 ~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         278 EKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             HHHcCCChhhCcCHHHHhcCcchhhc
Confidence            99999999999999999999999754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-30  Score=221.46  Aligned_cols=161  Identities=22%  Similarity=0.356  Sum_probs=130.6

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      |||... ||.+|++...           ...||++++.||.++++|||||-..||||+.+..  +||+|||+|+......
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~--vKIsDFGLAr~~~d~~  357 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLV--VKISDFGLARLIGDDE  357 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCce--EEEcccccccccCCCc
Confidence            566555 9999999722           2667899999999999999999999999998876  9999999999433222


Q ss_pred             CCC--CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RPK--STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ...  ..--...|.|||.+....++.+ ||||||||+||||+| |+.||.+....+.+.     .....+++|.+..+|+
T Consensus       358 Y~~~~~~kfPIkWtAPEa~~~~~FS~k-SDVWSFGVlL~E~fT~G~~py~~msn~ev~~-----~le~GyRlp~P~~CP~  431 (468)
T KOG0197|consen  358 YTASEGGKFPIKWTAPEALNYGKFSSK-SDVWSFGVLLWELFTYGRVPYPGMSNEEVLE-----LLERGYRLPRPEGCPD  431 (468)
T ss_pred             eeecCCCCCCceecCHHHHhhCCcccc-cceeehhhhHHHHhccCCCCCCCCCHHHHHH-----HHhccCcCCCCCCCCH
Confidence            211  1123457999999999888766 999999999999999 899998876543332     2345678898889999


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHh
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                      .+.++|..||..+|++|||+..+.
T Consensus       432 ~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  432 EVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHHHHHHhhCCcccCCCHHHHH
Confidence            999999999999999999998664

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.96  E-value=9.6e-30  Score=219.76  Aligned_cols=175  Identities=22%  Similarity=0.304  Sum_probs=129.0

Q ss_pred             CcccccchHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      |++++++|.+++..+        .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...  .....
T Consensus       101 ~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~--~kl~dfg~~~~~~--~~~~~  176 (345)
T cd07877         101 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTD--DEMTG  176 (345)
T ss_pred             ehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCC--EEEeccccccccc--ccccc
Confidence            456667777665432        24678899999999999999999999999988775  9999999987432  22234


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh-------------------hh
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-------------------AV  133 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-------------------~~  133 (265)
                      ..++..|+|||.+.+....+.++|+|||||++|+|++|+.||.................                   ..
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (345)
T cd07877         177 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS  256 (345)
T ss_pred             cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHH
Confidence            56888999999987644345569999999999999999999976554333322211100                   00


Q ss_pred             cccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          134 QYKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       134 ~~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      ....+      .....++.+++||.+||..||.+||++.++++||||++...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         257 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             hcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence            00001      01235788999999999999999999999999999986443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.8e-29  Score=211.19  Aligned_cols=172  Identities=24%  Similarity=0.387  Sum_probs=128.8

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||++.+ +|.+++....        ++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||++........ .
T Consensus        81 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          81 MEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN--VKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             EecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC--EEEccCCceeecCCCcccc
Confidence            566644 8888876543        2557889999999999999999999999998665  99999999875443322 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+....+.++|+||||+++|+|++|..||.........    ..+............++.++.++
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM----MLIPKSKPPRLEDNGYSKLLREF  234 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh----hccccCCCCCCCcccCCHHHHHH
Confidence            33468889999999876544455699999999999999999999765432211    11111111111111367899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +.+||..||.+||++.+++.|+||+...
T Consensus       235 i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         235 VAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            9999999999999999999999997643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=8.4e-31  Score=228.37  Aligned_cols=169  Identities=34%  Similarity=0.589  Sum_probs=147.0

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      |||+.+ .+++++..++.         ..|+..++.|||+++|||||||.+|||++.+..  +||+|||++..+......
T Consensus       134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mn--ikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMN--IKIADFGFSTFFDYGLML  211 (596)
T ss_pred             EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccc--eeeeccccceeecccccc
Confidence            677666 78888887664         667899999999999999999999999998876  999999999988888888


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.+|++.|.|||++.+..|.++.+|+||+|+++|.|++|..||.+..-    ...-.++....+++|.  .++.++.++
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l----k~Lr~rvl~gk~rIp~--~ms~dce~l  285 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL----KELRPRVLRGKYRIPF--YMSCDCEDL  285 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc----ccccchheeeeecccc--eeechhHHH
Confidence            8999999999999999999999999999999999999999999988643    2333444556666666  478899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |+++|..+|.+|+++++++.|.|....
T Consensus       286 Lrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  286 LRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             HHHhhccCccccCCHHHhhhhcccchh
Confidence            999999999999999999999998643

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.96  E-value=2.4e-29  Score=213.97  Aligned_cols=171  Identities=28%  Similarity=0.479  Sum_probs=127.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||+ ++|+||||||+|||++.++.  +||+|||++..... ..
T Consensus        78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~-~~  154 (308)
T cd06615          78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLID-SM  154 (308)
T ss_pred             eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc--EEEccCCCcccccc-cc
Confidence            677765 8999886543         36678899999997 69999999999999987765  99999999864432 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHH--------------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISR--------------------  129 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--------------------  129 (265)
                      .....++..|+|||.+.+..+. .++|+|||||++|+|++|+.||...... ........                    
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~-~~~DiwslG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (308)
T cd06615         155 ANSFVGTRSYMSPERLQGTHYT-VQSDIWSLGLSLVEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPD  232 (308)
T ss_pred             cccCCCCcCccChhHhcCCCCC-ccchHHHHHHHHHHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCC
Confidence            3445788999999998776654 4599999999999999999999654321 11111100                    


Q ss_pred             -------------Hhhhc-ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          130 -------------IMAVQ-YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       130 -------------~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                   +.... ...| ...++.++++||.+||..+|++|||+.++++||||.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         233 SPRPMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             ccchhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                         00000 0001 11367889999999999999999999999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-31  Score=228.07  Aligned_cols=172  Identities=34%  Similarity=0.572  Sum_probs=143.0

Q ss_pred             CcccccchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVSSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||-..+...++|...           -.+.||+.+|.|||-++|||+||||+|||+.+ +..+++||||||+|+......
T Consensus       642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            666667666666533           23778999999999999999999999999954 344679999999999888777


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      -..+.+||+.|+|||++++++|... -|+||+|+++|.-++|.+||....+.   ...++. ....++...|..+++.+.
T Consensus       722 FRrsVVGTPAYLaPEVLrnkGyNrS-LDMWSVGVIiYVsLSGTFPFNEdEdI---ndQIQN-AaFMyPp~PW~eis~~Ai  796 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNKGYNRS-LDMWSVGVIIYVSLSGTFPFNEDEDI---NDQIQN-AAFMYPPNPWSEISPEAI  796 (888)
T ss_pred             hhhhhcCCccccCHHHHhhcccccc-ccceeeeEEEEEEecccccCCCccch---hHHhhc-cccccCCCchhhcCHHHH
Confidence            7788899999999999999998644 89999999999999999999876542   222222 234455556788999999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +||..+|+..-.+|.|+...+.|||++..
T Consensus       797 dlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  797 DLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence            99999999999999999999999999864

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.96  E-value=2.6e-29  Score=208.21  Aligned_cols=166  Identities=25%  Similarity=0.411  Sum_probs=129.6

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhh-----hcCceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSL-----SQQICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH-----~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||++.+ +|.+++...             .++.+++.++.|||     +.+|+|+||||+||+++.++.  +||+|||++
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~--~kl~d~g~~  157 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNN--VKLGDFGLA  157 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCC--EEEeccccc
Confidence            677755 888887643             23667899999999     999999999999999987765  999999998


Q ss_pred             ccCCCCCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCC
Q 024572           62 KSSLLHSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY  140 (265)
Q Consensus        62 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (265)
                      ........ .....++..|+|||.+.+..++ .++|+||||+++|+|++|+.||..... ..   ....+..... ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~-~~---~~~~~~~~~~-~~~~  231 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYD-EKSDIWSLGCLIYELCALSPPFTARNQ-LQ---LASKIKEGKF-RRIP  231 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCCC-chhHHHHHHHHHHHHHHCCCcccCcCH-HH---HHHHHhcCCC-CCCc
Confidence            76544332 3344688999999999876654 559999999999999999999987652 22   2222222221 1223


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       141 ~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ..++..+.+++.+||..+|.+||++.++++|||+
T Consensus       232 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         232 YRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            3678999999999999999999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=5.1e-30  Score=243.11  Aligned_cols=169  Identities=15%  Similarity=0.168  Sum_probs=121.5

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCC-----------------CCCcE
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGS-----------------PAPRL   53 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-----------------~~~~v   53 (265)
                      ||+.+.+|.+++...          .+++||+.+|.|||++||+||||||+||||+..                 ....+
T Consensus        59 ~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~  138 (793)
T PLN00181         59 LECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATT  138 (793)
T ss_pred             hccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcc
Confidence            688888999998642          236789999999999999999999999999542                 22347


Q ss_pred             EEeccCCcccCCCCC-----------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCC
Q 024572           54 KICDFGYSKSSLLHS-----------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFED  116 (265)
Q Consensus        54 kl~Dfg~a~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~  116 (265)
                      |++|||+++......                 ......+|++|+|||++.+..+. .++|||||||++|||++|..|+..
T Consensus       139 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~-~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        139 KSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSN-CASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             cccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCC-chhhhhhHHHHHHHHhhCCCchhh
Confidence            778888775321100                 00113578899999999888775 559999999999999999888653


Q ss_pred             CCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          117 QEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ..  ..+......     ...+...........++.+||..+|.+||++.++++||||...
T Consensus       218 ~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        218 KS--RTMSSLRHR-----VLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             HH--HHHHHHHHh-----hcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            21  111111111     1111111224567789999999999999999999999999753

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.96  E-value=5.3e-29  Score=212.32  Aligned_cols=171  Identities=22%  Similarity=0.286  Sum_probs=130.2

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++..+.          ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||++....   ..
T Consensus       100 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~--~kL~dfg~~~~~~---~~  174 (313)
T cd06633         100 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ--VKLADFGSASKSS---PA  174 (313)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCC--EEEeecCCCcccC---CC
Confidence            6888888888776533          3567899999999999999999999999987765  9999999876322   22


Q ss_pred             CCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           71 KSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ....++..|+|||.+..  ......++|+|||||++|+|++|..||.............    ...........++..++
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~  250 (313)
T cd06633         175 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA----QNDSPTLQSNEWTDSFR  250 (313)
T ss_pred             CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----hcCCCCCCccccCHHHH
Confidence            34568889999999853  2223455999999999999999999998765433332221    11111112234678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +|+.+||..+|.+||++.+++.||||+...+.
T Consensus       251 ~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~  282 (313)
T cd06633         251 GFVDYCLQKIPQERPASAELLRHDFVRRDRPA  282 (313)
T ss_pred             HHHHHHccCChhhCcCHHHHhcCcccCCCchh
Confidence            99999999999999999999999999875543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=2e-29  Score=210.36  Aligned_cols=172  Identities=27%  Similarity=0.338  Sum_probs=125.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++|++||||+|+||+++.++.  ++|+|||+++......  
T Consensus        87 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~--~~l~d~~~~~~~~~~~~~  164 (272)
T cd06629          87 LEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGI--CKISDFGISKKSDDIYDN  164 (272)
T ss_pred             EecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCe--EEEeeccccccccccccc
Confidence            566644 7888776543         3567899999999999999999999999987765  9999999987433211  


Q ss_pred             -CCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                       ......++..|+|||.+.... ..+.++|+||||+++|++++|..||............................++..
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (272)
T cd06629         165 DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPV  244 (272)
T ss_pred             cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHH
Confidence             122335788999999987654 234559999999999999999999975443322222111111111111112356889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +.++|.+||..+|.+|||+.++++||||
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         245 ALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=4.2e-30  Score=233.81  Aligned_cols=160  Identities=20%  Similarity=0.229  Sum_probs=108.9

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--CCCCCCcCCCCCcccccccCCcCC---
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--SRPKSTVGTPAYIAPEVLSRREYD---   91 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~---   91 (265)
                      ++.+++.+|.|||++||+||||||+|||++... +.+||+|||+|+.....  ......++++.|+|||.+......   
T Consensus       260 i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~-~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~  338 (566)
T PLN03225        260 IMRQILFALDGLHSTGIVHRDVKPQNIIFSEGS-GSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSA  338 (566)
T ss_pred             HHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCC-CcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCC
Confidence            466788999999999999999999999998532 24999999999754322  223445789999999976432211   


Q ss_pred             ------------------CchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH----------hhhccc------C
Q 024572           92 ------------------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI----------MAVQYK------I  137 (265)
Q Consensus        92 ------------------~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----------~~~~~~------~  137 (265)
                                        ..++|||||||++|+|+++..++..  ....+...+...          ......      .
T Consensus       339 ~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (566)
T PLN03225        339 PSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGF  416 (566)
T ss_pred             ccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhh
Confidence                              1236999999999999987666432  112222211110          000000      0


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       138 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      ..........++||.+||.+||.+|||+.++|+||||+....
T Consensus       417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            000012334568999999999999999999999999986543

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.96  E-value=5.2e-29  Score=211.72  Aligned_cols=171  Identities=24%  Similarity=0.291  Sum_probs=128.5

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++....          ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||++.....   .
T Consensus        94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~--~kL~dfg~~~~~~~---~  168 (307)
T cd06607          94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT--VKLADFGSASLVSP---A  168 (307)
T ss_pred             HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCC--EEEeecCcceecCC---C
Confidence            5777788777765422          3667899999999999999999999999988775  99999998864332   2


Q ss_pred             CCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           71 KSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ....++..|+|||++.+  ....+.++||||||+++|+|++|+.||...........    +............++..++
T Consensus       169 ~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  244 (307)
T cd06607         169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNDSPTLSSNDWSDYFR  244 (307)
T ss_pred             CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH----HhcCCCCCCCchhhCHHHH
Confidence            34567889999998853  22234459999999999999999999976543222111    1111111111224678999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ++|.+||..+|.+||++.+++.||||....+.
T Consensus       245 ~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  276 (307)
T cd06607         245 NFVDSCLQKIPQDRPSSEELLKHRFVLRERPP  276 (307)
T ss_pred             HHHHHHhcCChhhCcCHHHHhcChhhcccCCc
Confidence            99999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.96  E-value=3.4e-29  Score=207.76  Aligned_cols=170  Identities=28%  Similarity=0.448  Sum_probs=128.4

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++....         ++.+++.++.|||++||+|+||+|+||+++.++.  +||+|||++.........
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~--~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGV--IKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEcccccccccCCCCCc
Confidence            46665 48888876543         3567889999999999999999999999988665  999999998754332221


Q ss_pred             -----CCCcCCCCCcccccccCCc--CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           71 -----KSTVGTPAYIAPEVLSRRE--YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        71 -----~~~~~~~~y~aPE~~~~~~--~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                           ....++..|+|||.+.+..  ....++|+||||+++|++++|+.||............+  ........|....+
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~  233 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHV--GAGHKPPIPDSLQL  233 (264)
T ss_pred             ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHH--hcCCCCCCCccccc
Confidence                 1245788999999987654  13455999999999999999999997654322211111  11222334444456


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +..+.++|.+||..+|.+|||+.+++.|||+
T Consensus       234 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         234 SPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            8999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.96  E-value=2.4e-29  Score=213.00  Aligned_cols=172  Identities=23%  Similarity=0.314  Sum_probs=127.6

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.++|.+++..+          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++........ 
T Consensus        95 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~--~kl~dfg~~~~~~~~~~~  172 (302)
T cd07864          95 FEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ--IKLADFGLARLYNSEESR  172 (302)
T ss_pred             EcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCc--EEeCcccccccccCCccc
Confidence            567777666665532          23677899999999999999999999999988776  99999999875433221 


Q ss_pred             -CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cC----------
Q 024572           70 -PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KI----------  137 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~----------  137 (265)
                       .....++..|+|||.+.+....+.++|||||||++|+|++|+.||........+............ ..          
T Consensus       173 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (302)
T cd07864         173 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFN  252 (302)
T ss_pred             ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccc
Confidence             122346778999998876544456699999999999999999999876554443333322111000 00          


Q ss_pred             -------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          138 -------------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       138 -------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                                   .....++..+.++|.+||..+|.+|||+.+++.||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         253 TMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                         0122468899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.96  E-value=9.6e-30  Score=211.73  Aligned_cols=167  Identities=24%  Similarity=0.341  Sum_probs=124.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... .
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~--~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD--VKLADFGVAAKITATIAK  162 (267)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC--EEECcCccceeecccccc
Confidence            677765 8988876443         3667899999999999999999999999987765  9999999987543222 2


Q ss_pred             CCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc---CCCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK---IPDYVHIS  144 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  144 (265)
                      .....++..|+|||.+..  ....+.++|+||+||++|+|++|+.||..........    ........   .+....++
T Consensus       163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  238 (267)
T cd06646         163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF----LMSKSNFQPPKLKDKTKWS  238 (267)
T ss_pred             cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe----eeecCCCCCCCCccccccC
Confidence            233468889999998853  2222456999999999999999999996543221111    11111111   11223468


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      ..+.+||.+||..+|.+|||+.++++|+|
T Consensus       239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         239 STFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            89999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=1.6e-29  Score=220.58  Aligned_cols=147  Identities=22%  Similarity=0.344  Sum_probs=112.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC---CCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++........   ....++..|+|||++.+..++ .
T Consensus       217 i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~--~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~  293 (374)
T cd05106         217 FSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRV--AKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYT-V  293 (374)
T ss_pred             HHHHHHHHHHHHHHCCEEeccCchheEEEeCCCe--EEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCC-c
Confidence            3567899999999999999999999999987665  999999998754322211   122345679999999877665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++|||||||++|+|++ |+.||........+....    ......+.+..+++++.++|.+||..||.+|||+.++++
T Consensus       294 ~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         294 QSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV----KRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH----HcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            5999999999999997 999998755433332222    222233333356899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.96  E-value=2.7e-29  Score=208.93  Aligned_cols=172  Identities=27%  Similarity=0.385  Sum_probs=128.6

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++|++|+||+|+||+++.++. .+||+|||++........ 
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          82 VEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEccccccccccccccc
Confidence            456554 8888876533         3678899999999999999999999999976542 489999999865433211 


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                          .....++..|+|||.+.+..++ .++|+||+|+++|+|++|..||.......... ..............+..+++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYG-RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLSP  238 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhCH
Confidence                1223578899999998876665 45999999999999999999997554322222 22222222222223335788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ++.+++.+||..+|.+||++.++++||||+
T Consensus       239 ~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         239 GLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.96  E-value=1.7e-29  Score=209.55  Aligned_cols=171  Identities=26%  Similarity=0.386  Sum_probs=131.8

Q ss_pred             Ccccc-cchHHHHHHh---------ccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE---------GSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~---------~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++...         .++.+++.++.|||+ +|++||||+|+||+++.++.  ++|+|||++........
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~--~~l~df~~~~~~~~~~~  155 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE--VKIADFGISKVLENTLD  155 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCC--EEEccCccceecccCCC
Confidence            56777 5898888752         347778999999999 99999999999999988765  99999999875543333


Q ss_pred             CC-CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC-CCHHH
Q 024572           70 PK-STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH-ISQDC  147 (265)
Q Consensus        70 ~~-~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  147 (265)
                      .. ...++..|+|||.+.+..++ .++|+||||+++|+|++|+.||...... ........+..... ...... ++..+
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~l  232 (264)
T cd06623         156 QCNTFVGTVTYMSPERIQGESYS-YAADIWSLGLTLLECALGKFPFLPPGQP-SFFELMQAICDGPP-PSLPAEEFSPEF  232 (264)
T ss_pred             cccceeecccccCHhhhCCCCCC-chhhHHHHHHHHHHHHhCCCCCcccccc-CHHHHHHHHhcCCC-CCCCcccCCHHH
Confidence            22 34578899999998877654 4599999999999999999999776421 12222333222221 222223 78899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .++|.+||..+|++||++.++++||||+.
T Consensus       233 ~~li~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         233 RDFISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence            99999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.96  E-value=1.5e-29  Score=214.25  Aligned_cols=171  Identities=28%  Similarity=0.477  Sum_probs=129.1

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.+++...        .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... ..
T Consensus        97 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~--~kL~dfg~~~~~~~~~~~~  174 (297)
T cd06659          97 MEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKR  174 (297)
T ss_pred             EecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCc--EEEeechhHhhcccccccc
Confidence            466554 677765432        24677899999999999999999999999987775  9999999986433222 22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..+. .++|+|||||++|+|++|+.||........... +..  ...........++..+.++
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~  250 (297)
T cd06659         175 KSLVGTPYWMAPEVISRTPYG-TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRD--SPPPKLKNAHKISPVLRDF  250 (297)
T ss_pred             cceecCccccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-Hhc--cCCCCccccCCCCHHHHHH
Confidence            335688999999999876664 459999999999999999999986544332221 111  1111122233578899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |.+||..+|.+||++.++++||||.+.
T Consensus       251 i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         251 LERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             HHHHhcCCcccCcCHHHHhhChhhccC
Confidence            999999999999999999999999765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.96  E-value=4.3e-29  Score=208.02  Aligned_cols=170  Identities=27%  Similarity=0.367  Sum_probs=124.5

Q ss_pred             Ccccc-cchHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++. ++|.+++....            .+.+++.++.|||++||+||||||+||+++... +.++|+|||++......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~-~~~~l~dfg~~~~~~~~  162 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS-GVVKISDFGTSKRLAGI  162 (268)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-CeEEEecchhheecccC
Confidence            46665 48988887541            245788999999999999999999999997532 24999999998644322


Q ss_pred             C-CCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           68 S-RPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        68 ~-~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      . ......++..|+|||.+.+.. ..+.++|+||+|+++|+|++|+.||........... ......  .....+..+++
T Consensus       163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~  239 (268)
T cd06624         163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF-KVGMFK--IHPEIPESLSA  239 (268)
T ss_pred             CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh-hhhhhc--cCCCCCcccCH
Confidence            2 122345788999999986543 234569999999999999999999976443221111 011111  11122335788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .+++|+.+||..+|.+|||+.+++.||||
T Consensus       240 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         240 EAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            99999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.96  E-value=2.8e-29  Score=208.74  Aligned_cols=167  Identities=31%  Similarity=0.406  Sum_probs=126.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+|+||||+||+++.++.  ++|+|||+++.....   
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~--~~l~Dfg~~~~~~~~~~~  162 (265)
T cd06652          85 MEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN--VKLGDFGASKRLQTICLS  162 (265)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC--EEECcCcccccccccccc
Confidence            567754 8988876543         3667889999999999999999999999987765  999999998743321   


Q ss_pred             -CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           68 -SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                       .......++..|+|||.+.+..++ .++|+|||||++|+|++|+.||..........    ...........+..++..
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  237 (265)
T cd06652         163 GTGMKSVTGTPYWMSPEVISGEGYG-RKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF----KIATQPTNPVLPPHVSDH  237 (265)
T ss_pred             ccccccCCCCccccChhhhcCCCCC-cchhHHHHHHHHHHHhhCCCCCCccchHHHHH----HHhcCCCCCCCchhhCHH
Confidence             112234588899999999876664 45999999999999999999997654332221    111111112223356788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      +.++|.+||. +|.+||+++++++|||+.
T Consensus       238 ~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         238 CRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            9999999994 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=2.5e-29  Score=211.68  Aligned_cols=176  Identities=26%  Similarity=0.426  Sum_probs=128.3

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++...             .++.+++.++.|||++|++|+||+|+||+++.++.  ++|+|||++.....
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~--~~l~dfg~~~~~~~  157 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQ--VKLCDFGVSGELVN  157 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCe--EEEeeccccccccc
Confidence            577754 888775431             24666889999999999999999999999987765  99999999864432


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHHHHHhhhc-ccCCC----C
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAVQ-YKIPD----Y  140 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~-~~~~~----~  140 (265)
                      .. .....++..|+|||.+.+..++. ++|+|||||++|+|++|+.||...... .........+.... ...+.    .
T Consensus       158 ~~-~~~~~~~~~y~~pE~~~~~~~~~-~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd06621         158 SL-AGTFTGTSFYMAPERIQGKPYSI-TSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG  235 (287)
T ss_pred             cc-cccccCCccccCHHHhcCCCCCc-hhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC
Confidence            22 22345788999999998777654 499999999999999999999865220 01111122111111 11111    1


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       141 ~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ..+++.+.+||.+||..+|.+|||+.+++.||||++....
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             CchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccc
Confidence            2356789999999999999999999999999999765543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.96  E-value=2.2e-29  Score=208.59  Aligned_cols=168  Identities=27%  Similarity=0.402  Sum_probs=131.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+|+||+|+||+++.++.  ++|+|||++.........
T Consensus        79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~--~~l~d~~~~~~~~~~~~~  156 (258)
T cd05578          79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH--VHITDFNIATKVTPDTLT  156 (258)
T ss_pred             EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCC--EEEeecccccccCCCccc
Confidence            466654 8888876552         3667899999999999999999999999988776  999999998765444334


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..+. .++|+||||+++|+|++|..||...... ...........  .....+..++..+.++
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~  232 (258)
T cd05578         157 TSTSGTPGYMAPEVLCRQGYS-VAVDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIRAKQET--ADVLYPATWSTEAIDA  232 (258)
T ss_pred             cccCCChhhcCHHHHcccCCC-CcccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHHHHhcc--ccccCcccCcHHHHHH
Confidence            455688899999999876654 4599999999999999999999876542 11112222111  2223334678999999


Q ss_pred             HHHhcccCCCCCCCH--HHHhcCccc
Q 024572          151 LSRIFVANPSRRITI--KEIKSHPWF  174 (265)
Q Consensus       151 i~~~L~~dP~~R~s~--~ell~h~~f  174 (265)
                      |.+||..+|.+||++  .++++||||
T Consensus       233 i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         233 INKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHccCChhHcCCccHHHHhcCCCC
Confidence            999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.96  E-value=3e-29  Score=206.86  Aligned_cols=168  Identities=29%  Similarity=0.436  Sum_probs=131.1

Q ss_pred             Cccc-ccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLG-VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++ +++|.+++....         ++.+++.++.|||++|++|+||+|+||+++.++.  ++|+|||.+........ 
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGV--VKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC--EEEcccccEEeccccccc
Confidence            5666 558888877653         4677899999999999999999999999988665  99999999875554432 


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                        .....++..|+|||.+.+.... .++|+||||+++|+|++|..||.......   .....+.........+..++..+
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l  233 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGEEYG-RAADIWSLGCTVIEMATGKPPWSELGNPM---AALYKIGSSGEPPEIPEHLSEEA  233 (260)
T ss_pred             ccccCCCCCccccCHhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCchH---HHHHhccccCCCcCCCcccCHHH
Confidence              3445688899999999876654 45999999999999999999998765222   12222221112222333568999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++|.+||..+|.+||++.++++||||
T Consensus       234 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         234 KDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.96  E-value=3.7e-29  Score=206.84  Aligned_cols=166  Identities=24%  Similarity=0.358  Sum_probs=129.9

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+           .++.+++.++.|||+.|++||||+|+||+++.++.  +||+|||++.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~--~kl~d~~~~~~~~~~~  155 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGL--IKLGDFGISKILGSEY  155 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCC--EEECcCcceEEccccc
Confidence            677764 899988764           23567888999999999999999999999988765  9999999987543332


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       ......++..|+|||.+.+..++ .++|+||||+++|+|++|..||..........    .+...... +....++..+
T Consensus       156 ~~~~~~~~~~~y~ape~~~~~~~~-~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~  229 (256)
T cd08221         156 SMAETVVGTPYYMSPELCQGVKYN-FKSDIWALGCVLYELLTLKRTFDATNPLNLVV----KIVQGNYT-PVVSVYSSEL  229 (256)
T ss_pred             ccccccCCCccccCHhhcCCCCCC-CcchhHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHcCCCC-CCccccCHHH
Confidence             22345689999999999876654 44899999999999999999997754433222    22222222 2224578999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++|.+||..+|.+||++.++++|+|+
T Consensus       230 ~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         230 ISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=2.8e-29  Score=210.84  Aligned_cols=172  Identities=23%  Similarity=0.352  Sum_probs=125.1

Q ss_pred             Cccccc-chHHHHHH---------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVML---------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~---------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+ +|.++...         ..++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||++....... .
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~--~~l~dfg~~~~~~~~~~~  156 (286)
T cd07846          79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGV--VKLCDFGFARTLAAPGEV  156 (286)
T ss_pred             EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCc--EEEEeeeeeeeccCCccc
Confidence            466666 44444332         224667889999999999999999999999988765  9999999987543322 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh---------------hc
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA---------------VQ  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------~~  134 (265)
                      .....++..|+|||.+.+....+.++||||||+++|+|++|+.||..................               ..
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd07846         157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG  236 (286)
T ss_pred             cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence            223457889999999876554456699999999999999999999765543332222211000               00


Q ss_pred             ccCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          135 YKIP----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       135 ~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ...+          ....++..+.+|+.+||..+|.+||++.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            0001          123567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=232.91  Aligned_cols=174  Identities=30%  Similarity=0.432  Sum_probs=135.7

Q ss_pred             Ccc-cccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQL-GVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~-~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||| +||.|-.++....         .+.-+.-+|..+|+.|+|||||||+|||||..|+  |||+|||.|-.....+  
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH--ikLADFGsClkm~~dG~V  231 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH--IKLADFGSCLKMDADGTV  231 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc--EeeccchhHHhcCCCCcE
Confidence            454 3447777766555         2444667788899999999999999999998886  9999999986554333  


Q ss_pred             CCCCCcCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 RPKSTVGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .....+|||-|.+||+++.    .+.+++.+|+||+||++|+|++|..||...+-...+.+++..-  ..+.+|.-..+|
T Consensus       232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk--~~l~FP~~~~VS  309 (1317)
T KOG0612|consen  232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK--ESLSFPDETDVS  309 (1317)
T ss_pred             EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh--hhcCCCcccccC
Confidence            3345679999999999964    2445677999999999999999999998866655555555442  244566556799


Q ss_pred             HHHHHHHHHhcccCCCCCCC---HHHHhcCcccCCCCC
Q 024572          145 QDCRNLLSRIFVANPSRRIT---IKEIKSHPWFLKNLP  179 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s---~~ell~h~~f~~~~~  179 (265)
                      .++++||.+++. +|..|..   ++++..||||.+.-.
T Consensus       310 eeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  310 EEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            999999999874 6889987   999999999986544

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=4.1e-29  Score=212.17  Aligned_cols=169  Identities=31%  Similarity=0.502  Sum_probs=127.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++||+||||||.||+++.++.  +||+|||+++......  
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~--~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGH--IKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCC--EEEeeCCCccccCcCccc
Confidence            677755 8888886543         2556788999999999999999999999987765  9999999886321100  


Q ss_pred             --------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc
Q 024572           69 --------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ  134 (265)
Q Consensus        69 --------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  134 (265)
                                    ......++..|+|||.+.+..+. .++|+|||||++|++++|..||.+.....    .........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~vl~el~~g~~pf~~~~~~~----~~~~~~~~~  232 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYG-KPVDWWAMGIILYEFLVGCVPFFGDTPEE----LFGQVISDD  232 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcc
Confidence                          00123467889999998876665 55999999999999999999998654322    222222222


Q ss_pred             ccCCC-CCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccCC
Q 024572          135 YKIPD-YVHISQDCRNLLSRIFVANPSRRIT---IKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s---~~ell~h~~f~~  176 (265)
                      ...+. ...++..+.++|.+||..+|.+||+   +.++++||||..
T Consensus       233 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         233 IEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             cCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence            22222 1257889999999999999999997   799999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.96  E-value=3.6e-29  Score=207.37  Aligned_cols=169  Identities=35%  Similarity=0.552  Sum_probs=131.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||+|+||+++.++.  ++|+|||++.......  
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~--~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          72 MEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGH--LKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCC--EEEEecccchhcccCccc
Confidence            566654 8888876533         4677899999999999999999999999998776  9999999986433221  


Q ss_pred             -------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC
Q 024572           69 -------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV  141 (265)
Q Consensus        69 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (265)
                             ......++..|+|||.+.+.... .++|+||||+++|++++|..||........    ...+.......+...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~  224 (265)
T cd05579         150 NLNDDEKEDKRIVGTPDYIAPEVILGQGHS-KTVDWWSLGCILYEFLVGIPPFHGETPEEI----FQNILNGKIEWPEDV  224 (265)
T ss_pred             ccccccccccCcccCccccCHHHhcCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCCcCCCccc
Confidence                   11233578899999998876654 559999999999999999999977654332    222222333344433


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCH---HHHhcCcccCC
Q 024572          142 HISQDCRNLLSRIFVANPSRRITI---KEIKSHPWFLK  176 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~---~ell~h~~f~~  176 (265)
                      .++..+.+++.+||..+|.+|||+   .++++||||++
T Consensus       225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            458999999999999999999999   99999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=2.2e-29  Score=206.32  Aligned_cols=159  Identities=25%  Similarity=0.306  Sum_probs=122.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  ++++|||.+......  .
T Consensus        64 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~l~df~~~~~~~~~--~  139 (237)
T cd05576          64 LQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGH--IQLTYFSRWSEVEDS--C  139 (237)
T ss_pred             EecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC--EEEecccchhccccc--c
Confidence            677765 8988876543         3567889999999999999999999999988776  999999987643322  2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..++ .++|+||+|+++|+|++|+.||.......      .  .......|  ..++..++++
T Consensus       140 ~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~~~~~~~~~~------~--~~~~~~~~--~~~~~~~~~l  208 (237)
T cd05576         140 DGEAVENMYCAPEVGGISEET-EACDWWSLGAILFELLTGKTLVECHPSGI------N--THTTLNIP--EWVSEEARSL  208 (237)
T ss_pred             ccCCcCccccCCcccCCCCCC-chhhHHHHHHHHHHHHHCcchhhcCchhc------c--cccccCCc--ccCCHHHHHH
Confidence            234567789999998776664 45999999999999999998875432110      0  00111222  3578899999


Q ss_pred             HHHhcccCCCCCCCH-----HHHhcCccc
Q 024572          151 LSRIFVANPSRRITI-----KEIKSHPWF  174 (265)
Q Consensus       151 i~~~L~~dP~~R~s~-----~ell~h~~f  174 (265)
                      |.+||..||++|+++     .++++||||
T Consensus       209 i~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         209 LQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            999999999999986     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.96  E-value=3.3e-29  Score=205.79  Aligned_cols=167  Identities=28%  Similarity=0.400  Sum_probs=128.6

Q ss_pred             Ccccc-cchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. .+|.+++...          .++.+++.++.+||++|++||||+|+||+++.++.  ++|+|||.+........
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~  153 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGE--VKLIDFGLSAQLSDTKA  153 (253)
T ss_pred             EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCe--EEEeecccccccccccc
Confidence            46666 5888887665          24677899999999999999999999999987765  99999999875544332


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....++..|+|||.+.+..++ .++|+||||+++|+|++|+.||.............   .......+....++..+.+
T Consensus       154 ~~~~~~~~~~~~PE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  229 (253)
T cd05122         154 RNTMVGTPYWMAPEVINGKPYD-YKADIWSLGITAIELAEGKPPYSELPPMKALFKIA---TNGPPGLRNPEKWSDEFKD  229 (253)
T ss_pred             ccceecCCcccCHHHHcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH---hcCCCCcCcccccCHHHHH
Confidence            3445688899999999876654 45999999999999999999997754322222111   1111222333335889999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcc
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      +|.+||..||.+|||+.++++|||
T Consensus       230 ~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         230 FLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHccCChhhCCCHHHHhcCCC
Confidence            999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.8e-29  Score=217.94  Aligned_cols=173  Identities=25%  Similarity=0.289  Sum_probs=129.3

Q ss_pred             CcccccchHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++++|.+++...        .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.....  ....
T Consensus        99 ~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~--~kl~dfg~~~~~~~--~~~~  174 (343)
T cd07880          99 MPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQTDS--EMTG  174 (343)
T ss_pred             EecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeeccccccccc--Cccc
Confidence            577777887776532        24678899999999999999999999999987765  99999999874432  2233


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh----------------hccc
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA----------------VQYK  136 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------------~~~~  136 (265)
                      ..+++.|+|||.+.+....+.++|+|||||++|++++|+.||............+.....                ....
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07880         175 YVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKK  254 (343)
T ss_pred             cccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHh
Confidence            467889999999876443456699999999999999999999876543333222211000                0000


Q ss_pred             CC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          137 IP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       137 ~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+         ....++..+.++|.+||..||.+|||+.+++.||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         255 LPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             ccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence            00         112467889999999999999999999999999999753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-31  Score=213.42  Aligned_cols=174  Identities=23%  Similarity=0.327  Sum_probs=139.7

Q ss_pred             Cccccc-chHHHHHHhcc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEGS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-S   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~   68 (265)
                      ||||+- |.+|.++.|..          ++--+.+|.|||-..-+|||||..|||++..+.  .||+|||.|...... .
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~--AKLADFGVAGQLTDTMA  184 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI--AKLADFGVAGQLTDTMA  184 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch--hhhhhccccchhhhhHH
Confidence            899998 99999998753          445577899999999999999999999998886  999999998654432 3


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ..++.+||+.|||||++...+|++. +||||||++..+|..|++||......   +.+..--......+..+..++.++.
T Consensus       185 KRNTVIGTPFWMAPEVI~EIGY~~~-ADIWSLGITaIEMAEG~PPYsDIHPM---RAIFMIPT~PPPTF~KPE~WS~~F~  260 (502)
T KOG0574|consen  185 KRNTVIGTPFWMAPEVIEEIGYDTK-ADIWSLGITAIEMAEGRPPYSDIHPM---RAIFMIPTKPPPTFKKPEEWSSEFN  260 (502)
T ss_pred             hhCccccCcccccHHHHHHhccchh-hhHhhhcchhhhhhcCCCCccccccc---ceeEeccCCCCCCCCChHhhhhHHH
Confidence            4456789999999999999999877 89999999999999999999775432   1111111112222233446788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +|+++||.+.|++|.|+.++++|||.++....
T Consensus       261 DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~  292 (502)
T KOG0574|consen  261 DFIRSCLIKKPEERKTALRLCEHTFIKNAPGC  292 (502)
T ss_pred             HHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence            99999999999999999999999999876553

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.96  E-value=4.9e-29  Score=211.56  Aligned_cols=167  Identities=20%  Similarity=0.243  Sum_probs=121.8

Q ss_pred             Cccccc-chHHHHHHh----------------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE----------------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAP   51 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~   51 (265)
                      ||++.+ +|.+++..+                            .++.+++.++.|||++||+||||||+|||++.++. 
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~-  176 (304)
T cd05096          98 TEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLT-  176 (304)
T ss_pred             EecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCcc-
Confidence            677755 888887543                            25667899999999999999999999999987765 


Q ss_pred             cEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHH
Q 024572           52 RLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV--GAYPFEDQEDPKNFRKT  126 (265)
Q Consensus        52 ~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~--g~~pf~~~~~~~~~~~~  126 (265)
                       +||+|||+++.......   .....++..|+|||++.+..++ .++|||||||++|+|++  +..||............
T Consensus       177 -~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~  254 (304)
T cd05096         177 -IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFT-TASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENA  254 (304)
T ss_pred             -EEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCC-chhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHH
Confidence             99999999875432211   1223457789999998877665 45999999999999986  56788765443332222


Q ss_pred             HHHHhhh--cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          127 ISRIMAV--QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       127 ~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .......  ......+..++..+.+||.+||..+|.+|||+.+|.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         255 GEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            1111111  1111223357889999999999999999999999954

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=4.5e-29  Score=211.16  Aligned_cols=147  Identities=22%  Similarity=0.317  Sum_probs=111.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHh
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLAD   96 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D   96 (265)
                      ++.+++.++.|||++||+||||||+|||++.++.  +||+|||++..............+..|+|||.+.+..++ .++|
T Consensus       124 i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~D  200 (297)
T cd05089         124 FASDVATGMQYLSEKQFIHRDLAARNVLVGENLA--SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYT-TKSD  200 (297)
T ss_pred             HHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe--EEECCcCCCccccceeccCCCCcCccccCchhhccCCCC-chhh
Confidence            3567888999999999999999999999987765  999999998633221111222235579999998877665 4599


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           97 VWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        97 iwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ||||||++|+|++ |..||...........    +. .....+.+..++..+.+||.+||..+|.+|||+.++++.
T Consensus       201 vwSlG~il~el~t~g~~pf~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         201 VWSFGVLLWEIVSLGGTPYCGMTCAELYEK----LP-QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----Hh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999997 9999977654332222    11 122223334688999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.96  E-value=3.6e-29  Score=211.33  Aligned_cols=173  Identities=28%  Similarity=0.478  Sum_probs=130.9

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.+++...        .++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||++....... ..
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~--~~l~dfg~~~~~~~~~~~~  173 (292)
T cd06657          96 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRR  173 (292)
T ss_pred             EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEEcccccceecccccccc
Confidence            677765 777765432        24677899999999999999999999999988765  9999999876443222 22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..+. .++|+||+|+++|+|++|..||.......... .+...  ..........++..+.++
T Consensus       174 ~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~l~~l  249 (292)
T cd06657         174 KSLVGTPYWMAPELISRLPYG-PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDN--LPPKLKNLHKVSPSLKGF  249 (292)
T ss_pred             cccccCccccCHHHhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhh--CCcccCCcccCCHHHHHH
Confidence            334688899999998766654 45999999999999999999998654432222 11111  111222333578899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      +.+||..+|.+||++.++++||||.+..+
T Consensus       250 i~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         250 LDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             HHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence            99999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.96  E-value=3.5e-29  Score=209.66  Aligned_cols=170  Identities=26%  Similarity=0.318  Sum_probs=129.0

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||++.+ +|.+++....        .+.+++.++.|||+++++|+||+|+||+++.++.  ++|+|||++........ .
T Consensus        81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06640          81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCC--EEEcccccceeccCCcccc
Confidence            677755 8888876433        3567888999999999999999999999987765  99999999865433221 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+...+ .++|+|||||++|+|++|..||..........    .+. ..........++..+.++
T Consensus       159 ~~~~~~~~y~apE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~l  232 (277)
T cd06640         159 NTFVGTPFWMAPEVIQQSAYD-SKADIWSLGITAIELAKGEPPNSDMHPMRVLF----LIP-KNNPPTLTGEFSKPFKEF  232 (277)
T ss_pred             ccccCcccccCHhHhccCCCc-cHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh----hhh-cCCCCCCchhhhHHHHHH
Confidence            234578899999999876664 45999999999999999999997654322211    111 111112223467889999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      |.+||..+|.+||++.++++|+||.+..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06640         233 IDACLNKDPSFRPTAKELLKHKFIVKNA  260 (277)
T ss_pred             HHHHcccCcccCcCHHHHHhChHhhhcc
Confidence            9999999999999999999999996543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.5e-29  Score=199.42  Aligned_cols=174  Identities=21%  Similarity=0.315  Sum_probs=130.0

Q ss_pred             cccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            2 QLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         2 e~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      .+|+..|.-.+..+          ...+++..+|+|+|+..|+|||+|+.|+||+.++.  +||+|||+++.+....   
T Consensus       104 ~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgi--lklADFGlar~fs~~~n~~  181 (376)
T KOG0669|consen  104 DFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGI--LKLADFGLARAFSTSKNVV  181 (376)
T ss_pred             HHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCce--EEeeccccccceecccccC
Confidence            45555555554433          34677899999999999999999999999998887  9999999997543322   


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--ccCCC-----
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--YKIPD-----  139 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~-----  139 (265)
                        ..+..+.|.+|++||.+.+...++++.|||..||++.+|++|.+.+.+.....++..+ ..+...-  ..+|.     
T Consensus       182 kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~I-s~LcGs~tkevWP~~d~lp  260 (376)
T KOG0669|consen  182 KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLI-SQLCGSITKEVWPNVDNLP  260 (376)
T ss_pred             CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHH-HHHhccCCcccCCCcccch
Confidence              2233457999999999999777777799999999999999999999887665544332 2221100  00110     


Q ss_pred             -----------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          140 -----------------------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       140 -----------------------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                                             +..-.+++.+|+.+||..||.+|+++.++++|.||.+..
T Consensus       261 L~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  261 LYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             HHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence                                   001245788999999999999999999999999997543

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.96  E-value=3.1e-29  Score=207.34  Aligned_cols=166  Identities=26%  Similarity=0.387  Sum_probs=127.7

Q ss_pred             Ccccc-cchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++...           .++.+++.++.|||++|++|+||+|+||+++.++.  ++|+|||++.......
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~--~~l~d~~~~~~~~~~~  155 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT--IKLGDFGIARVLNSTV  155 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC--EEEeeccceeecCcch
Confidence            56664 4788777543           23567899999999999999999999999987765  9999999987543322


Q ss_pred             C-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 R-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      . .....++..|+|||.+.+..++ .++|+|||||++|+|++|+.||............    .... ..+.+..++.++
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~  229 (256)
T cd08218         156 ELARTCIGTPYYLSPEICENRPYN-NKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI----IRGS-YPPVSSHYSYDL  229 (256)
T ss_pred             hhhhhccCCccccCHHHhCCCCCC-CccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH----hcCC-CCCCcccCCHHH
Confidence            1 1233578889999999876665 4589999999999999999999765443322222    2222 122334678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++|.+||..+|.+||++.++++||||
T Consensus       230 ~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         230 RNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=1.1e-29  Score=221.74  Aligned_cols=165  Identities=25%  Similarity=0.440  Sum_probs=130.9

Q ss_pred             ccchHHHHHHhc---------cccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            5 VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         5 ~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      .++|..|+.+.+         |.+||+.+|.|||++.  |||||||.+||||+++ .|.|||+|+|+|..... ......
T Consensus       127 SGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl~r~-s~aksv  204 (632)
T KOG0584|consen  127 SGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATLLRK-SHAKSV  204 (632)
T ss_pred             CCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC-cCceeecchhHHHHhhc-ccccee
Confidence            348888887654         6889999999999765  9999999999999865 35799999999975443 333447


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSR  153 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  153 (265)
                      +|||.|||||+.. ..|+. .+||||||++++||+|+..||..+....++.+.+   .....+.....--.+++++||.+
T Consensus       205 IGTPEFMAPEmYE-E~YnE-~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV---~SGiKP~sl~kV~dPevr~fIek  279 (632)
T KOG0584|consen  205 IGTPEFMAPEMYE-ENYNE-LVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV---TSGIKPAALSKVKDPEVREFIEK  279 (632)
T ss_pred             ccCccccChHHHh-hhcch-hhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH---HcCCCHHHhhccCCHHHHHHHHH
Confidence            8999999999987 45654 4999999999999999999999988765544433   32222211112236799999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCCC
Q 024572          154 IFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       154 ~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ||.. .+.|+|+.++|.||||...
T Consensus       280 Cl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  280 CLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HhcC-chhccCHHHHhhChhhccc
Confidence            9999 9999999999999999765

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=5.7e-29  Score=209.10  Aligned_cols=173  Identities=24%  Similarity=0.401  Sum_probs=128.2

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++...+         ...+++.++.|||+ ++|+||||||+||+++.++.  ++|+|||++..... ..
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~--~~l~d~gl~~~~~~-~~  158 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ--IKLCDFGVSGELIN-SI  158 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCc--EEEccCCcccchhh-hc
Confidence            577765 7888776533         35567888999996 69999999999999987765  99999998864322 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-------HHHHHHHHHHhhhcccCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-------KNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      .....++..|+|||++.+..++. ++|+|||||++|++++|+.||......       .........+............
T Consensus       159 ~~~~~~~~~~~aPE~~~~~~~~~-~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd06620         159 ADTFVGTSTYMSPERIQGGKYTV-KSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSD  237 (284)
T ss_pred             cCccccCcccCCHHHHccCCCCc-cchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchh
Confidence            23456899999999987766554 499999999999999999999865432       1111222222221111111123


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++..+.+|+.+||..||.+|||+.++++|+||.+.
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         238 FPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            67889999999999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=4.9e-29  Score=206.09  Aligned_cols=163  Identities=21%  Similarity=0.339  Sum_probs=127.5

Q ss_pred             Cccc-ccchHHHHHHh------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLG-VSSLSEFVMLE------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~-~~sL~~~~~~~------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||++ +++|.+++...                  .++.+++.++.|||++||+||||||+||+++.++.  +||+|||.+
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~--~~l~dfg~~  152 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLV--VKISDFGLS  152 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCc--EEEcccccc
Confidence            6777 56899988765                  23677889999999999999999999999998765  999999998


Q ss_pred             ccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccC
Q 024572           62 KSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKI  137 (265)
Q Consensus        62 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~  137 (265)
                      .......   ......++..|+|||.+....++ .++|+|||||++|+|++ |..||...........    +.. ....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----~~~-~~~~  226 (262)
T cd00192         153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFT-SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEY----LRK-GYRL  226 (262)
T ss_pred             cccccccccccccCCCcCccccCHHHhccCCcc-hhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHc-CCCC
Confidence            7654432   22334578899999998876654 45999999999999999 6999987644322222    221 2233


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       138 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+..++..+.+++.+||..+|.+|||+.+++++
T Consensus       227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         227 PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            4444678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.96  E-value=6.6e-29  Score=216.84  Aligned_cols=147  Identities=25%  Similarity=0.360  Sum_probs=112.8

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC---CCCcCCCCCcccccccCCcCCCch
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYDGKL   94 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~   94 (265)
                      +.+++.++.|||++||+||||||+|||++.++.  +||+|||+++........   ....++..|+|||.+.+..++ .+
T Consensus       220 ~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~  296 (375)
T cd05104         220 SYQVAKGMSFLASKNCIHRDLAARNILLTHGRI--TKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYT-FE  296 (375)
T ss_pred             HHHHHHHHHHHHHCCeeccCCchhhEEEECCCc--EEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCC-CC
Confidence            457899999999999999999999999987665  999999998754332211   122345679999999887765 45


Q ss_pred             HhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           95 ADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        95 ~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +|||||||++|+|++ |..||........+.+.+..    ......+...+.++.+||.+||..||++|||+.++++.
T Consensus       297 sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         297 SDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE----GYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh----CccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            999999999999998 88999776544433333322    22222233568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.96  E-value=9e-29  Score=207.18  Aligned_cols=162  Identities=23%  Similarity=0.356  Sum_probs=123.5

Q ss_pred             Cccccc-chHHHHHHhc-----------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEe
Q 024572            1 MQLGVS-SLSEFVMLEG-----------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKIC   56 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~   56 (265)
                      ||++.+ +|.+++...+                       ++.+++.++.|||++||+||||||+||+++.++.  +||+
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~--~kl~  164 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV--VKIG  164 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe--EEEC
Confidence            566654 8888886543                       3667889999999999999999999999988765  9999


Q ss_pred             ccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhh
Q 024572           57 DFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMA  132 (265)
Q Consensus        57 Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~  132 (265)
                      |||+++......   ......++..|+|||.+.+..++ .++|||||||++|+|++ |..||..........    .+..
T Consensus       165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~----~~~~  239 (280)
T cd05049         165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE----CITQ  239 (280)
T ss_pred             CcccceecccCcceecCCCCcccceecChhhhccCCcc-hhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH----HHHc
Confidence            999986432221   11233456789999999887765 45999999999999998 999997765433222    2222


Q ss_pred             hcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          133 VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       133 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ... ......++..+.+++.+||..||.+||++.++++
T Consensus       240 ~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         240 GRL-LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            222 2223367899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.96  E-value=1.6e-29  Score=216.86  Aligned_cols=174  Identities=17%  Similarity=0.260  Sum_probs=121.7

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.+|.|||++||+||||||+||+++.++.  ++++||+.+.......
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~--~~~~~~~~~~~~~~~~  155 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGL--VSLSGLSHLYSLVRNG  155 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCc--EEEechHHHhhhhccC
Confidence            455554 788877643           24667899999999999999999999999987765  9999997543221111


Q ss_pred             C--------CCCCcCCCCCcccccccCCcC-CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh--------
Q 024572           69 R--------PKSTVGTPAYIAPEVLSRREY-DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM--------  131 (265)
Q Consensus        69 ~--------~~~~~~~~~y~aPE~~~~~~~-~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------  131 (265)
                      .        .....++..|+|||++.+... .+.++||||+||++|+|++|+.||............+....        
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (328)
T cd08226         156 QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITT  235 (328)
T ss_pred             ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccc
Confidence            0        011234567999999876421 24569999999999999999999977543322222111000        


Q ss_pred             ---------------------------------hhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          132 ---------------------------------AVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       132 ---------------------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                                       ......+....++..+.+||++||..||++|||+.++++||||+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                                             000011112235678999999999999999999999999999953

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.96  E-value=8.2e-29  Score=208.68  Aligned_cols=174  Identities=28%  Similarity=0.407  Sum_probs=131.2

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..+..         +.+++.++.|||++|++||||+|+|||++.++.  +||+|||+++......  
T Consensus        84 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~~~~  161 (290)
T cd05613          84 LDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGH--VVLTDFGLSKEFHEDEVE  161 (290)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCC--EEEeeCccceeccccccc
Confidence            566665 88888765442         447899999999999999999999999987765  9999999987543322  


Q ss_pred             CCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ......++..|+|||.+.+.. ....++|+||||+++|+|++|..||...............+.....  +.+..++..+
T Consensus       162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  239 (290)
T cd05613         162 RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--PYPQEMSALA  239 (290)
T ss_pred             ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC--CCCccCCHHH
Confidence            122345888999999987532 2345599999999999999999999754433333333333332222  2233578899


Q ss_pred             HHHHHHhcccCCCCCC-----CHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRI-----TIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~-----s~~ell~h~~f~~~~  178 (265)
                      .+++.+||..+|.+||     ++.+++.||||.+..
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            9999999999999997     899999999997653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.96  E-value=4.6e-29  Score=209.82  Aligned_cols=172  Identities=25%  Similarity=0.414  Sum_probs=132.3

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++. .+|.+++..+.          .+.+++.++.|||++||+|+||+|+||+++.++.  ++|+|||++....... 
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~  171 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS--VKLADFGFAAQLTKEKS  171 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCC--EEECccchhhhhccchh
Confidence            56777 59999988874          3677889999999999999999999999987765  9999999876433221 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......++..|+|||.+.+..++ .++|+||||+++|+|++|+.||.............   .......+....++..+.
T Consensus       172 ~~~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~  247 (286)
T cd06614         172 KRNSVVGTPYWMAPEVIKRKDYG-PKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT---TKGIPPLKNPEKWSPEFK  247 (286)
T ss_pred             hhccccCCcccCCHhHhcCCCCC-CccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCCCCcchhhCCHHHH
Confidence            11233578899999998877665 45999999999999999999997654432222111   111112223334788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ++|.+||..+|.+|||+.+++.|+||++..
T Consensus       248 ~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  277 (286)
T cd06614         248 DFLNKCLVKDPEKRPSAEELLQHPFLKKAC  277 (286)
T ss_pred             HHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence            999999999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-28  Score=203.12  Aligned_cols=165  Identities=35%  Similarity=0.517  Sum_probs=130.0

Q ss_pred             Cccc-ccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLG-VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++ +++|.+++....         ++.+++.++.|||+++++|+||+|+||+++.++.  ++|+|||.+...... ..
T Consensus        72 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~--~~l~d~~~~~~~~~~~~~  149 (250)
T cd05123          72 LEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGH--IKLTDFGLAKELSSEGSR  149 (250)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCc--EEEeecCcceecccCCCc
Confidence            6777 568888876542         3667899999999999999999999999988765  999999998754333 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....++..|+|||.+.+.... .++|+||||+++|++++|..||......    .....+....  .+.+..++..+.+
T Consensus       150 ~~~~~~~~~~~~Pe~~~~~~~~-~~~D~~slG~~~~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~~~~~~~~~l~~  222 (250)
T cd05123         150 TNTFCGTPEYLAPEVLLGKGYG-KAVDWWSLGVLLYEMLTGKPPFYAEDRK----EIYEKILKDP--LRFPEFLSPEARD  222 (250)
T ss_pred             ccCCcCCccccChHHhCCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhcCC--CCCCCCCCHHHHH
Confidence            3345688899999999876654 4599999999999999999999765432    2222222222  3333356899999


Q ss_pred             HHHHhcccCCCCCCCH---HHHhcCccc
Q 024572          150 LLSRIFVANPSRRITI---KEIKSHPWF  174 (265)
Q Consensus       150 li~~~L~~dP~~R~s~---~ell~h~~f  174 (265)
                      +|.+||..||.+||++   .++++||||
T Consensus       223 ~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         223 LISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            9999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.96  E-value=4e-29  Score=211.16  Aligned_cols=172  Identities=25%  Similarity=0.388  Sum_probs=130.0

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||++.+ +|.+++....        .+.+++.++.|||++|++||||||+||+++.++.  ++|+|||++........ .
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~--~kL~dfg~~~~~~~~~~~~  172 (293)
T cd06647          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR  172 (293)
T ss_pred             EecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCC--EEEccCcceeccccccccc
Confidence            466654 8888776532        4667889999999999999999999999987765  99999998764433222 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||.+.+..++ .++|+||||+++|++++|+.||.............   .......+....++..+.++
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l  248 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDF  248 (293)
T ss_pred             ccccCChhhcCchhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh---cCCCCCCCCccccCHHHHHH
Confidence            234588899999998876664 45999999999999999999997754432211111   11111222333567889999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      |.+||..+|.+||++.+++.|+||+...
T Consensus       249 i~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         249 LNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             HHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            9999999999999999999999997554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.96  E-value=4.1e-29  Score=209.18  Aligned_cols=168  Identities=24%  Similarity=0.284  Sum_probs=127.1

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-P   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~   70 (265)
                      ||++.+ +|.+++...        ..+.+++.++.|||++||+|+||+|+||+++.++.  ++|+|||++........ .
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06642          81 MEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             EEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCC--EEEccccccccccCcchhh
Confidence            577765 787766533        24677889999999999999999999999987765  99999999875433221 2


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+..++ .++|+|||||++|+|++|+.||..........    .+... ........++..+.++
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~l  232 (277)
T cd06642         159 NTFVGTPFWMAPEVIKQSAYD-FKADIWSLGITAIELAKGEPPNSDLHPMRVLF----LIPKN-SPPTLEGQYSKPFKEF  232 (277)
T ss_pred             hcccCcccccCHHHhCcCCCc-hhhhHHHHHHHHHHHHhCCCCCcccchhhHHh----hhhcC-CCCCCCcccCHHHHHH
Confidence            234578899999999877665 45999999999999999999997543322111    11111 1111122467889999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      |.+||..+|.+||++.++++||||..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         233 VEACLNKDPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             HHHHccCCcccCcCHHHHHHhHHHHH
Confidence            99999999999999999999999964

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.96  E-value=7.7e-29  Score=213.44  Aligned_cols=148  Identities=23%  Similarity=0.356  Sum_probs=114.1

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......   .....++..|+|||.+.+..++.+
T Consensus       178 ~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~--vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  255 (337)
T cd05054         178 YSFQVARGMEFLASRKCIHRDLAARNILLSENNV--VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQ  255 (337)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCc--EEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcc
Confidence            3567899999999999999999999999997765  99999999875432211   122345678999999988777655


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                       +|||||||++|+|++ |..||.+......+...+..    ......+...++.+.+++.+||..+|++||++.++++|
T Consensus       256 -~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         256 -SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             -ccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             999999999999997 99999775443333332221    11222233578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.96  E-value=1.1e-28  Score=209.86  Aligned_cols=170  Identities=24%  Similarity=0.313  Sum_probs=128.2

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++..+.          .+.+++.++.|||++|++||||+|+||+++.++.  ++|+|||++.....   .
T Consensus        94 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~---~  168 (308)
T cd06634          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL--VKLGDFGSASIMAP---A  168 (308)
T ss_pred             EEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCc--EEECCcccceeecC---c
Confidence            6788788877765432          2556788999999999999999999999987765  99999998864332   2


Q ss_pred             CCCcCCCCCcccccccC---CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 KSTVGTPAYIAPEVLSR---REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ....++..|+|||.+.+   ..+ +.++|||||||++|+|++|..||............    ............++..+
T Consensus       169 ~~~~~~~~y~aPE~~~~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  243 (308)
T cd06634         169 NXFVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNESPALQSGHWSEYF  243 (308)
T ss_pred             ccccCCccccCHHHHhhcccCCC-CcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH----hhcCCCCcCcccccHHH
Confidence            34468889999999753   233 44599999999999999999998765432222211    11111111223578889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      .+||.+||..+|.+||++.+++.|||+....+.
T Consensus       244 ~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~  276 (308)
T cd06634         244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP  276 (308)
T ss_pred             HHHHHHHhhCCcccCCCHHHHhhCccccccCCh
Confidence            999999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=1.9e-28  Score=203.03  Aligned_cols=162  Identities=20%  Similarity=0.257  Sum_probs=121.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.. +|.+++....         ++.+++.++.|||++||+||||||.||+++.++.  +||+|||+++....... 
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~--~kl~Dfg~~~~~~~~~~~  151 (257)
T cd05116          74 MELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHY--AKISDFGLSKALGADENY  151 (257)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCe--EEECCCccccccCCCCCe
Confidence            566664 7888876432         3667889999999999999999999999987765  99999999875433221 


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....++..|+|||.+....++ .++|+|||||++|+|++ |..||........ ...   +.. ....+.+..+++
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~---i~~-~~~~~~~~~~~~  225 (257)
T cd05116         152 YKAKTHGKWPVKWYAPECMNYYKFS-SKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-TQM---IES-GERMECPQRCPP  225 (257)
T ss_pred             eeecCCCCCCccccCHhHhccCCcC-chhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHH---HHC-CCCCCCCCCCCH
Confidence               1122345789999998766654 45999999999999998 9999976543222 222   222 122333446899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++.++|.+||..||++||++.+|..
T Consensus       226 ~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         226 EMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHHHHHHHHhccCchhCcCHHHHHH
Confidence            9999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.96  E-value=1.3e-28  Score=207.43  Aligned_cols=162  Identities=24%  Similarity=0.364  Sum_probs=122.0

Q ss_pred             Ccccc-cchHHHHHHhc----------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEec
Q 024572            1 MQLGV-SSLSEFVMLEG----------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICD   57 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~D   57 (265)
                      ||++. ++|.+++...+                      ++.+++.++.|||++||+||||||+||+++.++.  +||+|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~--~kl~d  163 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL--VKIGD  163 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc--EEecc
Confidence            56665 48888876433                      3667899999999999999999999999988765  99999


Q ss_pred             cCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhh
Q 024572           58 FGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        58 fg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      ||+++.......   .....++..|+|||.+.+..++ .++|+|||||++|+|++ |..||.........    ..+...
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~----~~i~~~  238 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI----ECITQG  238 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHHcC
Confidence            999875432211   1223356789999999876665 45999999999999998 89999776543322    222222


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .. .+....++..+.+|+.+||..+|.+|||+.+++.
T Consensus       239 ~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         239 RV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             Cc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            21 2223357889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=1.2e-28  Score=206.50  Aligned_cols=165  Identities=18%  Similarity=0.257  Sum_probs=123.3

Q ss_pred             Ccccc-cchHHHHHHhc----------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcc
Q 024572            1 MQLGV-SSLSEFVMLEG----------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~   62 (265)
                      ||++. ++|.+++....                ++.+++.++.|||+++++||||||+||+++.++ ...+||+|||+++
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~  167 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR  167 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCcccc
Confidence            57774 58998886543                466788999999999999999999999998654 2348999999987


Q ss_pred             cCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           63 SSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        63 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                      .......   ......+..|+|||++.+..++ .++|||||||++|+|++ |..||........ ...+.    ......
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~----~~~~~~  241 (277)
T cd05036         168 DIYRASYYRKGGRAMLPIKWMPPEAFLDGIFT-SKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-MEFVT----GGGRLD  241 (277)
T ss_pred             ccCCccceecCCCCCccHhhCCHHHHhcCCcC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH----cCCcCC
Confidence            5422211   1122335679999999877765 45999999999999997 9999987554322 22211    111223


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+..++..+.+++.+||..+|++|||+.++++|
T Consensus       242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            334678999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.96  E-value=6.4e-30  Score=222.36  Aligned_cols=160  Identities=23%  Similarity=0.323  Sum_probs=121.5

Q ss_pred             cccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC---CCC
Q 024572            3 LGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL---LHS   68 (265)
Q Consensus         3 ~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~---~~~   68 (265)
                      +|++ +|+.+++..          .+++||+.++.|||.++|||||||..|||+.+++.  |||+|||++....   ...
T Consensus       468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~k--VkIgDFGLatvk~~w~g~~  545 (678)
T KOG0193|consen  468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLK--VKIGDFGLATVKTRWSGEQ  545 (678)
T ss_pred             hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCc--EEEecccceeeeeeecccc
Confidence            5666 787777644          45899999999999999999999999999987765  9999999985322   222


Q ss_pred             CCCCCcCCCCCcccccccCC---cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC----CCC
Q 024572           69 RPKSTVGTPAYIAPEVLSRR---EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP----DYV  141 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~  141 (265)
                      ......|...|||||+++..   +| ++.+|||||||++|||++|..||... ..+++   +-.+... +-.|    ...
T Consensus       546 q~~qp~gsilwmAPEvIRmqd~nPf-S~qSDVYaFGiV~YELltg~lPysi~-~~dqI---ifmVGrG-~l~pd~s~~~s  619 (678)
T KOG0193|consen  546 QLEQPHGSLLWMAPEVIRMQDDNPF-SFQSDVYAFGIVWYELLTGELPYSIQ-NRDQI---IFMVGRG-YLMPDLSKIRS  619 (678)
T ss_pred             ccCCCccchhhhcHHHHhhcccCCC-CcccchhhhhHHHHHHHhCcCCcCCC-Chhhe---EEEeccc-ccCccchhhhc
Confidence            33445688899999999753   34 45599999999999999999999843 33222   1111111 1112    234


Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          142 HISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .++.++++|+..||.+++++||.+.+||.
T Consensus       620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  620 NCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             cCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            57789999999999999999999999986

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.96  E-value=2e-28  Score=209.12  Aligned_cols=170  Identities=25%  Similarity=0.329  Sum_probs=129.7

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++..+.          ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||++....   ..
T Consensus       104 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~--~kl~dfg~~~~~~---~~  178 (317)
T cd06635         104 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ--VKLADFGSASIAS---PA  178 (317)
T ss_pred             EeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCC--EEEecCCCccccC---Cc
Confidence            6888888877765432          3567889999999999999999999999987765  9999999876432   22


Q ss_pred             CCCcCCCCCcccccccC---CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 KSTVGTPAYIAPEVLSR---REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ....++..|+|||.+..   ..+ +.++|+|||||++|+|++|+.||............    ............++..+
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~-~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l  253 (317)
T cd06635         179 NSFVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNESPTLQSNEWSDYF  253 (317)
T ss_pred             ccccCCccccChhhhhcCCCCCC-CccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH----HhccCCCCCCccccHHH
Confidence            34568889999999742   333 45599999999999999999999775433322222    22222222233578889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +++|.+||..+|.+||++.++++|+|+....+.
T Consensus       254 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         254 RNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             HHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence            999999999999999999999999999765543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.96  E-value=2e-28  Score=206.24  Aligned_cols=168  Identities=21%  Similarity=0.312  Sum_probs=125.7

Q ss_pred             Ccccc-cchHHHHHHh-------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCC
Q 024572            1 MQLGV-SSLSEFVMLE-------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~   60 (265)
                      ||++. ++|.+++...                   ..+.+++.++.|||++||+||||||+||+++.++.  ++|+|||+
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~--~~L~Dfg~  165 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT--VKIGDFGM  165 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCc--EEECcCCc
Confidence            67775 4899998642                   23556888999999999999999999999987765  99999999


Q ss_pred             cccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           61 SKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        61 a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ++.......   .....++..|+|||.+.+..++ .++|+|||||++|+|++ |..||.+......    ...+.... .
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~-~~~DvwslG~~l~el~~~~~~p~~~~~~~~~----~~~~~~~~-~  239 (288)
T cd05061         166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGG-Y  239 (288)
T ss_pred             cccccccccccccCCCcccccccCHHHhccCCCC-hHhHHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHcCC-C
Confidence            874432221   1122356789999999876665 45999999999999998 7889876543222    12222111 1


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc------CcccCC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS------HPWFLK  176 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~------h~~f~~  176 (265)
                      .+....++..+.+++.+||..+|.+|||+.++++      ||||..
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            2223356889999999999999999999999986      888864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.96  E-value=1.3e-28  Score=206.06  Aligned_cols=163  Identities=20%  Similarity=0.277  Sum_probs=121.7

Q ss_pred             Cccccc-chHHHHHHh-------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~   60 (265)
                      ||++.+ +|.+++...                   .++.+++.++.|||++|++||||||+||+++.++.  ++|+|||+
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~--~~l~dfg~  165 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT--VKIGDFGM  165 (277)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC--EEECCCCC
Confidence            576654 898887642                   13556889999999999999999999999997765  99999999


Q ss_pred             cccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           61 SKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        61 a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ++.......   .....++..|+|||.+.+..++ .++|+|||||++|+|++ |..||.+.......    ..+..... 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~----~~~~~~~~-  239 (277)
T cd05062         166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL----RFVMEGGL-  239 (277)
T ss_pred             ccccCCcceeecCCCCccCHhhcChhHhhcCCcC-chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH----HHHHcCCc-
Confidence            864432211   1122456789999999876665 45999999999999999 78898765432222    11111111 


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+....++..+.+++.+||..+|.+|||+.+++++
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         240 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            22234678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.96  E-value=1.5e-28  Score=210.94  Aligned_cols=173  Identities=24%  Similarity=0.371  Sum_probs=127.5

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++++|.+++....        ++.+++.++.|||++||+||||+|+||+++.++.  +||+|||.+.....  ....
T Consensus        89 ~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~--~~l~dfg~~~~~~~--~~~~  164 (328)
T cd07856          89 TELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCD--LKICDFGLARIQDP--QMTG  164 (328)
T ss_pred             eehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCC--EEeCccccccccCC--CcCC
Confidence            6788888877765322        3667889999999999999999999999987765  99999999874322  2233


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH--------------------hh
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI--------------------MA  132 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~--------------------~~  132 (265)
                      ..++..|+|||.+.+....+.++|+|||||++|+|++|+.||................                    ..
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS  244 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh
Confidence            4678899999998764444566999999999999999999997654322211111100                    00


Q ss_pred             hcc--cCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          133 VQY--KIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       133 ~~~--~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...  ..+   ....++..+.++|.+||..+|.+|||+.+++.||||...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         245 LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence            000  001   112467899999999999999999999999999999643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.96  E-value=9.6e-29  Score=206.26  Aligned_cols=162  Identities=20%  Similarity=0.309  Sum_probs=120.5

Q ss_pred             Ccccc-cchHHHHHHh-------------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGV-SSLSEFVMLE-------------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-------------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++. ++|.+++..+                         .++.+++.++.|||++||+||||||+||+++.++.  +|
T Consensus        75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~--~k  152 (270)
T cd05047          75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--AK  152 (270)
T ss_pred             EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCe--EE
Confidence            56665 4888887643                         23566788999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhh
Q 024572           55 ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      |+|||++..............+..|+|||++.+..++ .++|+|||||++|+|++ |..||..........    .+. .
T Consensus       153 l~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~----~~~-~  226 (270)
T cd05047         153 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----KLP-Q  226 (270)
T ss_pred             ECCCCCccccchhhhccCCCCccccCChHHHccCCCC-chhhHHHHHHHHHHHHcCCCCCccccCHHHHHH----HHh-C
Confidence            9999998633221111222345679999998776654 55999999999999997 999997654332222    111 1


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ....+....++..+.+++.+||..+|.+|||+.++++
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         227 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            2222333457889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=1.4e-28  Score=207.41  Aligned_cols=162  Identities=22%  Similarity=0.338  Sum_probs=122.8

Q ss_pred             Ccccc-cchHHHHHHh-------------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGV-SSLSEFVMLE-------------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-------------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++. ++|.+++...                         .++.+++.++.|||++||+||||||+||+++.++.  ++
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~--~~  163 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL--VK  163 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc--EE
Confidence            57764 4888888643                         24667899999999999999999999999988765  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++......   ......++..|+|||.+.+..++ .++|||||||++|+|++ |+.||.........    ..+
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~~----~~~  238 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPWFQLSNTEVI----ECI  238 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHH
Confidence            99999986443221   12233467889999999877765 45999999999999998 99998765543222    222


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .... .......++..+.+++.+||..+|.+|||+.++++
T Consensus       239 ~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         239 TQGR-VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             hCCC-CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            2211 11223357889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.96  E-value=1.2e-28  Score=203.39  Aligned_cols=166  Identities=29%  Similarity=0.404  Sum_probs=129.0

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..+             .++.+++.++.|||++|++|+||+|+||+++.++.  ++|+|||++.....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~--~~l~d~~~~~~~~~  155 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGL--VKLGDFGISKVLSS  155 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCc--EEECCccceeeccc
Confidence            566654 888887764             23667899999999999999999999999987665  99999999875433


Q ss_pred             CC-CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HS-RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .. ......+++.|+|||.+.+..+.. ++|+||+|+++|+|++|+.||.......    ......... ..+.+..++.
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~-~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~  229 (258)
T cd08215         156 TVDLAKTVVGTPYYLSPELCQNKPYNY-KSDIWSLGCVLYELCTLKHPFEGENLLE----LALKILKGQ-YPPIPSQYSS  229 (258)
T ss_pred             CcceecceeeeecccChhHhccCCCCc-cccHHHHHHHHHHHHcCCCCCCCCcHHH----HHHHHhcCC-CCCCCCCCCH
Confidence            32 223346888999999988777654 4999999999999999999997655322    222222211 2223336789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .+.+++.+||..+|.+|||+.++++||||
T Consensus       230 ~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         230 ELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=2.6e-28  Score=202.82  Aligned_cols=162  Identities=20%  Similarity=0.289  Sum_probs=122.5

Q ss_pred             Cccc-ccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++ +++|.+++..+.           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~--~kl~df~~~~~~~~~~  158 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDT  158 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc--EEeCCCccccccccce
Confidence            5665 458988876532           3567889999999999999999999999987765  9999999987543322


Q ss_pred             CCC--CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RPK--STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ...  ....+..|+|||.+.+..++. ++|||||||++|+|++ |..||.+......... +   . .......+..++.
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~-~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~  232 (263)
T cd05052         159 YTAHAGAKFPIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-L---E-KGYRMERPEGCPP  232 (263)
T ss_pred             eeccCCCCCccccCCHHHhccCCCCc-hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-H---H-CCCCCCCCCCCCH
Confidence            111  122456799999998777654 4999999999999998 9999977543322211 1   1 1223334456889


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.++|.+||..+|++|||+.++++
T Consensus       233 ~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         233 KVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHH
Confidence            9999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.96  E-value=1.7e-28  Score=206.11  Aligned_cols=147  Identities=20%  Similarity=0.309  Sum_probs=113.0

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......   ......++..|+|||.+.+..++ .
T Consensus       129 i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~  205 (283)
T cd05090         129 IAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH--VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFS-S  205 (283)
T ss_pred             HHHHHHHHHHHHHhcCeehhccccceEEEcCCCc--EEeccccccccccCCcceecccCCCccceecChHHhccCCCC-c
Confidence            4557889999999999999999999999987765  9999999987543221   12233456789999999876665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++|+|||||++|+|++ |..||.+.... .....+   . .....+.+..++..+.+++.+||..+|.+||++.+++++
T Consensus       206 ~~Dv~slG~il~el~~~g~~p~~~~~~~-~~~~~~---~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         206 DSDIWSFGVVLWEIFSFGLQPYYGFSNQ-EVIEMV---R-KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             hhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH---H-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            5999999999999998 99999765432 112221   1 122233444688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=2.6e-29  Score=203.37  Aligned_cols=162  Identities=26%  Similarity=0.356  Sum_probs=120.8

Q ss_pred             ccccchHHHHHhhhhcCceecCCCcCcEEEcCC--CCCcEEEeccCCcccCCCCCCC----CCCcCCCCCcccccccCCc
Q 024572           16 GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGS--PAPRLKICDFGYSKSSLLHSRP----KSTVGTPAYIAPEVLSRRE   89 (265)
Q Consensus        16 ~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~a~~~~~~~~~----~~~~~~~~y~aPE~~~~~~   89 (265)
                      .++-||++++.|||++=|+||||||.|||+..+  ..++|||+|||+++.+...-..    ...+.|.+|+|||++.+..
T Consensus       136 silwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~  215 (438)
T KOG0666|consen  136 SILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGAR  215 (438)
T ss_pred             HHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccc
Confidence            346678999999999999999999999999655  3356999999999865543222    2345789999999999988


Q ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---------HHHHHHHHHHhhhc-ccC------CCC-------------
Q 024572           90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---------KNFRKTISRIMAVQ-YKI------PDY-------------  140 (265)
Q Consensus        90 ~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---------~~~~~~~~~~~~~~-~~~------~~~-------------  140 (265)
                      .++++.|+|++|||+.||++-.+.|.+....         +++.+++.-+..+. ..+      |.+             
T Consensus       216 hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~  295 (438)
T KOG0666|consen  216 HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYD  295 (438)
T ss_pred             cccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcC
Confidence            8889999999999999999998888764311         11222221111000 001      111             


Q ss_pred             -----------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          141 -----------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       141 -----------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                 ..-++...+|+.+||.+||-+|+|++++|+|+||...
T Consensus       296 n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  296 NVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             cchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence                       0124557899999999999999999999999999865

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.96  E-value=6.4e-29  Score=210.88  Aligned_cols=163  Identities=20%  Similarity=0.313  Sum_probs=122.0

Q ss_pred             Ccccc-cchHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGV-SSLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++. ++|.+++....                         .+.+++.++.|||++||+||||||+|||++.++.  +|
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~--~k  164 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--AK  164 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc--EE
Confidence            56765 48888886432                         3567889999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhh
Q 024572           55 ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      |+|||+++.............+..|+|||.+.+..+. .++|||||||++|+|++ |..||..........    .+ ..
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----~~-~~  238 (303)
T cd05088         165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----KL-PQ  238 (303)
T ss_pred             eCccccCcccchhhhcccCCCcccccCHHHHhccCCc-ccccchhhhhHHHHHHhcCCCCcccCChHHHHH----HH-hc
Confidence            9999998632221111222345679999998776654 55999999999999998 999997654432221    11 11


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ......+..++..+.+||.+||..+|++||++.+++++
T Consensus       239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            22223334578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.96  E-value=1.3e-28  Score=210.25  Aligned_cols=159  Identities=20%  Similarity=0.319  Sum_probs=122.1

Q ss_pred             ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC---
Q 024572            5 VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---   71 (265)
Q Consensus         5 ~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~---   71 (265)
                      .++|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.........   
T Consensus        92 ~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~~~~~  169 (316)
T cd05108          92 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGADEKEYHAE  169 (316)
T ss_pred             CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc--EEEccccccccccCCCcceecc
Confidence            347888776532          3567899999999999999999999999987765  9999999997554332211   


Q ss_pred             CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           72 STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+..|+|||.+.+..++ .++|||||||++|+|++ |+.||.+.... .+..    +.......+.+..++..+.++
T Consensus       170 ~~~~~~~y~apE~~~~~~~~-~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~l  243 (316)
T cd05108         170 GGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISS----ILEKGERLPQPPICTIDVYMI  243 (316)
T ss_pred             CCccceeecChHHhccCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHH----HHhCCCCCCCCCCCCHHHHHH
Confidence            12345679999999877765 45999999999999997 99999765432 2222    222333444455678899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcC
Q 024572          151 LSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+||..+|.+||++.+++.+
T Consensus       244 i~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         244 MVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999976

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.96  E-value=1.3e-28  Score=206.70  Aligned_cols=147  Identities=22%  Similarity=0.296  Sum_probs=113.0

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|+|++||+||||||+||+++.++.  +||+|||+++.......   .....+++.|+|||.+.+..++ .
T Consensus       129 ~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~  205 (283)
T cd05091         129 IVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN--VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFS-I  205 (283)
T ss_pred             HHHHHHHHHHHHHHcCccccccchhheEecCCCc--eEecccccccccccchheeeccCccCCccccCHHHHhcCCCC-c
Confidence            4568899999999999999999999999987765  99999999875432221   1223457789999998776665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++|||||||++|+|++ |..||.+.....    ....+.... ..+....++..+.+|+.+||+.+|.+||++.++++.
T Consensus       206 ~~Dv~slG~~l~el~~~g~~p~~~~~~~~----~~~~i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         206 DSDIWSYGVVLWEVFSYGLQPYCGYSNQD----VIEMIRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             chhHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHHcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            5999999999999998 888887654432    222222222 123334688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.96  E-value=1.9e-28  Score=204.96  Aligned_cols=165  Identities=32%  Similarity=0.567  Sum_probs=129.6

Q ss_pred             Cccc-ccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLG-VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++ +++|.+++....         ++.+++.++.+||++|++|+||+|+||+++.++.  ++|+|||++........ 
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~--~~l~df~~~~~~~~~~~~  158 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH--IKITDFGTAKVLDPNSSP  158 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--EEecCCccccccCCcccc
Confidence            6788 669998887653         3667899999999999999999999999987765  99999999864432221 


Q ss_pred             --------------------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHH
Q 024572           70 --------------------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISR  129 (265)
Q Consensus        70 --------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~  129 (265)
                                          .....++..|+|||.+.+..+. .++|+||||++++++++|+.||........+    ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~  233 (280)
T cd05581         159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAG-KSSDLWALGCIIYQMLTGKPPFRGSNEYLTF----QK  233 (280)
T ss_pred             ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCC-hhhhHHHHHHHHHHHHhCCCCCCCccHHHHH----HH
Confidence                                1223477899999998776654 5599999999999999999999876533222    22


Q ss_pred             HhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCccc
Q 024572          130 IMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITI----KEIKSHPWF  174 (265)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~----~ell~h~~f  174 (265)
                      +.......+  ..+++.+.+||.+||..+|.+|||+    .++++||||
T Consensus       234 ~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         234 ILKLEYSFP--PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHhcCCCCC--CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            222222333  3678999999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.96  E-value=2e-28  Score=202.32  Aligned_cols=167  Identities=26%  Similarity=0.373  Sum_probs=126.4

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||+++|+|+||||+||+++.++. .+||+|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGDFGIARQLNDSM  156 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecccccchhccCCc
Confidence            466644 8888775432           3567889999999999999999999999987643 37999999987543322


Q ss_pred             CC-CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RP-KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .. ....++..|+|||.+.+..++ .++|+||||+++|++++|..||..........    ...... ..+....++..+
T Consensus       157 ~~~~~~~~~~~~~ape~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~  230 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQNRPYN-NKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL----KICQGY-FAPISPNFSRDL  230 (257)
T ss_pred             ccccccCCCccccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHhccc-CCCCCCCCCHHH
Confidence            21 223588899999998776654 45999999999999999999997654332222    222111 122233578899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .++|.+||..+|++|||+.++++||||
T Consensus       231 ~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         231 RSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.96  E-value=2e-28  Score=206.15  Aligned_cols=174  Identities=28%  Similarity=0.398  Sum_probs=129.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.++.|||++|++||||||.||+++.++.  ++|+|||+++....... 
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~  161 (288)
T cd05583          84 LDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGH--VVLTDFGLSKEFLAEEEE  161 (288)
T ss_pred             EecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEEEECcccccccccccc
Confidence            566654 8888776543         3557899999999999999999999999987765  99999999875433322 


Q ss_pred             -CCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           70 -PKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       .....++..|+|||.+.+.. ..+.++|+||||+++|+|++|..||....................  .+.+..++..+
T Consensus       162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l  239 (288)
T cd05583         162 RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK--PPFPKTMSAEA  239 (288)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC--CCCCcccCHHH
Confidence             12235788999999987644 234559999999999999999999965433222223223322222  23334578899


Q ss_pred             HHHHHHhcccCCCCCCC---HHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRIT---IKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s---~~ell~h~~f~~~~  178 (265)
                      .++|.+||..+|++|||   +.++++||||+...
T Consensus       240 ~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         240 RDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             HHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            99999999999999998   56779999997653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.96  E-value=2.4e-28  Score=203.81  Aligned_cols=147  Identities=22%  Similarity=0.314  Sum_probs=112.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.......   .....++..|+|||.+.+..++ .
T Consensus       117 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~  193 (272)
T cd05075         117 FMTDIASGMEYLSSKSFIHRDLAARNCMLNENMN--VCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYT-T  193 (272)
T ss_pred             HHHHHHHHHHHHHHCCeeccccchhheEEcCCCC--EEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcC-h
Confidence            3567889999999999999999999999987765  99999999875433221   1222456789999999877665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++|+|||||++|+|++ |+.||........    ...+... ...+....++..+.++|.+||..+|.+|||+.+++++
T Consensus       194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         194 KSDVWSFGVTMWEIATRGQTPYPGVENSEI----YDYLRQG-NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCHHHH----HHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            5999999999999999 8899976543222    2222221 1223334678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.96  E-value=1.5e-28  Score=204.90  Aligned_cols=164  Identities=19%  Similarity=0.334  Sum_probs=118.7

Q ss_pred             Cccccc-chHHHHHHh--------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGVS-SLSEFVMLE--------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.+ +|.+++...              .++.+++.++.|||++||+||||||+|||++.++.  +||+|||++....
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~--~kl~dfg~~~~~~  151 (269)
T cd05042          74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLS--VKIGDYGLALEQY  151 (269)
T ss_pred             EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCc--EEEeccccccccc
Confidence            677765 899887653              23457889999999999999999999999988775  9999999986432


Q ss_pred             CCC---CCCCCcCCCCCcccccccCC------cCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcc
Q 024572           66 LHS---RPKSTVGTPAYIAPEVLSRR------EYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQY  135 (265)
Q Consensus        66 ~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~  135 (265)
                      ...   ......++..|+|||++...      ...+.++|||||||++|+|++ |..||........+......   ...
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~---~~~  228 (269)
T cd05042         152 PEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE---QDI  228 (269)
T ss_pred             cchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc---cCc
Confidence            221   11223456779999997532      223456999999999999999 78888766544333332221   111


Q ss_pred             cCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          136 KIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       136 ~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+   ....++..+.+++..|| .||++|||+.+|++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            222   22357888899999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=1.4e-28  Score=207.50  Aligned_cols=163  Identities=23%  Similarity=0.358  Sum_probs=123.1

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++.+++.++.|||++||+||||||+||+++.++.  +|
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~--~k  172 (293)
T cd05053          95 VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHV--MK  172 (293)
T ss_pred             EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCe--EE
Confidence            566544 8888886532                         4678899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++.......   .....++..|+|||.+.+..++ .++|||||||++|++++ |..||........... +   
T Consensus       173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~---  247 (293)
T cd05053         173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL-L---  247 (293)
T ss_pred             eCccccccccccccceeccCCCCCCccccCHHHhccCCcC-cccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH-H---
Confidence            999999875433221   1112345679999998776665 44999999999999997 9999977554332221 1   


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                       ........+..++..+.+|+.+||..+|.+|||+.+++++
T Consensus       248 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         248 -KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             -HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence             1122223334678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.96  E-value=3.6e-28  Score=203.70  Aligned_cols=158  Identities=19%  Similarity=0.311  Sum_probs=119.7

Q ss_pred             ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC---C
Q 024572            5 VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---K   71 (265)
Q Consensus         5 ~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~---~   71 (265)
                      +++|.+++..+.          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++........   .
T Consensus        92 ~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~--~kL~dfG~~~~~~~~~~~~~~~  169 (279)
T cd05109          92 YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHAD  169 (279)
T ss_pred             CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc--EEECCCCceeecccccceeecC
Confidence            348888876532          3677899999999999999999999999987665  999999998755432221   1


Q ss_pred             CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           72 STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...++..|+|||.+.+..++ .++|||||||++|+|++ |..||...... .....+    ......+....++..+.++
T Consensus       170 ~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~l  243 (279)
T cd05109         170 GGKVPIKWMALESILHRRFT-HQSDVWSYGVTVWELMTFGAKPYDGIPAR-EIPDLL----EKGERLPQPPICTIDVYMI  243 (279)
T ss_pred             CCccchhhCCHHHhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH----HCCCcCCCCccCCHHHHHH
Confidence            12345689999999877765 45999999999999998 89998765432 222222    2222334445688999999


Q ss_pred             HHHhcccCCCCCCCHHHHhc
Q 024572          151 LSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+||..||++||++.+++.
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=2.7e-28  Score=201.90  Aligned_cols=160  Identities=19%  Similarity=0.317  Sum_probs=122.1

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++..... 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~--~kl~dfg~~~~~~~~-  155 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASST-  155 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCc--EEecCCccceecccc-
Confidence            577754 8999887543           2456888999999999999999999999988775  999999998743322 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       ......+..|+|||++.+..++ .++|||||||++|+|++ |+.||.......    ....+.. .........+++.+
T Consensus       156 -~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~  228 (256)
T cd05082         156 -QDTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKD----VVPRVEK-GYKMDAPDGCPPVV  228 (256)
T ss_pred             -CCCCccceeecCHHHHccCCCC-chhhhHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHhc-CCCCCCCCCCCHHH
Confidence             1233456689999999877665 45999999999999997 999997654322    2222211 22223334678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+++.+||..+|++|||+.++++
T Consensus       229 ~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         229 YDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-29  Score=201.10  Aligned_cols=172  Identities=27%  Similarity=0.429  Sum_probs=130.0

Q ss_pred             CcccccchHHHHHHhcccc--------------chHHHHHhhh-hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGVSSLSEFVMLEGSVK--------------MKPDIFFSSL-SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~sL~~~~~~~~~~~--------------~i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      |||-.-||..|-....-++              -...+|.||- ...|||||+||+|||++..|.  |||||||++....
T Consensus       142 MELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~--vKLCDFGIcGqLv  219 (361)
T KOG1006|consen  142 MELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGD--VKLCDFGICGQLV  219 (361)
T ss_pred             HHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCC--EeeecccchHhHH
Confidence            6777777666555432211              1356788886 678999999999999998876  9999999987665


Q ss_pred             CCCCCCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC----C
Q 024572           66 LHSRPKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP----D  139 (265)
Q Consensus        66 ~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~  139 (265)
                      ..-..+...|...|||||.+..  .+|+-+ +|+||||++|||+.||++|+.....   ....+..+.....+.-    .
T Consensus       220 ~SiAkT~daGCrpYmAPERi~p~~~gyDiR-SDvWSLGITL~EvAtG~fPyr~w~s---vfeql~~Vv~gdpp~l~~~~~  295 (361)
T KOG1006|consen  220 DSIAKTVDAGCRPYMAPERIDPSDKGYDIR-SDVWSLGITLYEVATGNFPYRKWDS---VFEQLCQVVIGDPPILLFDKE  295 (361)
T ss_pred             HHHHhhhccCCccccChhccCCccCCcchh-hhhhhhcceEeeeecCCCCcchHHH---HHHHHHHHHcCCCCeecCccc
Confidence            5555556679999999999864  346555 9999999999999999999987643   2333333333332211    2


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ..+++..++.+|..||.+|-+.||+..+++.+||++...
T Consensus       296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             ccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence            235788999999999999999999999999999997544

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=5.5e-28  Score=202.74  Aligned_cols=162  Identities=21%  Similarity=0.311  Sum_probs=122.1

Q ss_pred             Cccc-ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++ +++|.+++..+.          ++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++.......
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~--~kl~Dfg~~~~~~~~~~  164 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSI--VQIADFGVADLLYPDDK  164 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc--EEEcCCccceeccCCCc
Confidence            3444 458888886532          4678899999999999999999999999987765  99999999875432221


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....++..|+|||.+.+..++ .++|||||||++|++++ |+.||.+.... .....+    ......+....++.
T Consensus       165 ~~~~~~~~~~~~y~~pE~~~~~~~~-~~~Dv~slG~il~el~t~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~~~~  238 (279)
T cd05111         165 KYFYSEHKTPIKWMALESILFGRYT-HQSDVWSYGVTVWEMMSYGAEPYAGMRPH-EVPDLL----EKGERLAQPQICTI  238 (279)
T ss_pred             ccccCCCCCcccccCHHHhccCCcC-chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH----HCCCcCCCCCCCCH
Confidence               1223466789999999877765 45999999999999998 99999765432 222222    22222333345678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+|||+.++++
T Consensus       239 ~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         239 DVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHH
Confidence            8999999999999999999999865

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.8e-28  Score=203.87  Aligned_cols=162  Identities=22%  Similarity=0.302  Sum_probs=123.2

Q ss_pred             Ccccc-cchHHHHHHh-------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCC
Q 024572            1 MQLGV-SSLSEFVMLE-------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~   60 (265)
                      ||++. ++|.+++...                   .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~--~kl~dfg~  165 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT--VKIGDFGM  165 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC--EEECCccc
Confidence            67775 5899887542                   24567889999999999999999999999998776  99999999


Q ss_pred             cccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           61 SKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        61 a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ++......   ......++..|+|||.+.+..++ .++|||||||++|++++ |..||........ .+..   . ....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~---~-~~~~  239 (277)
T cd05032         166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT-TKSDVWSFGVVLWEMATLAEQPYQGLSNEEV-LKFV---I-DGGH  239 (277)
T ss_pred             chhhccCcccccCCCCCccccccCHHHHhcCCCC-cccchHHHHHHHHHhhccCCCCCccCCHHHH-HHHH---h-cCCC
Confidence            87543222   11233467789999998776665 45999999999999998 9999976543322 2222   2 1122


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+..++..+.++|.+||..+|++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            2333457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.95  E-value=3.2e-28  Score=202.74  Aligned_cols=162  Identities=16%  Similarity=0.240  Sum_probs=122.9

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++|++||||||+||+++.++.  +|++|||.+........
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~--~~l~dfg~~~~~~~~~~  162 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLV--CKISGFRRLQEDKSEAI  162 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCc--EEECCCcccccccccch
Confidence            788876 8888887532          2556788999999999999999999999987765  99999998754322211


Q ss_pred             CC--CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PK--STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ..  ...++..|+|||.+.+..++ .++|||||||++|++++ |..||........    +..+. .....+.+..++..
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~ell~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~  236 (266)
T cd05064         163 YTTMSGKSPVLWAAPEAIQYHHFS-SASDVWSFGIVMWEVMSYGERPYWDMSGQDV----IKAVE-DGFRLPAPRNCPNL  236 (266)
T ss_pred             hcccCCCCceeecCHHHHhhCCcc-chhHHHHHHHHHHHHhcCCCCCcCcCCHHHH----HHHHH-CCCCCCCCCCCCHH
Confidence            11  22345789999999877765 45999999999999775 9999987654322    22221 22334455578899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+++.+||..+|.+||++.++++
T Consensus       237 ~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         237 LHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHHHHHcCCCchhCCCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.3e-28  Score=199.81  Aligned_cols=166  Identities=28%  Similarity=0.412  Sum_probs=127.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||+..+ +|.+++....         ++.+++.++.+||++||+||||+|+||+++.++.  ++|+|||++........ 
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~  155 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGV--VKLADFGVATKLNDVSKD  155 (254)
T ss_pred             EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCC--EEEeccccceecCCCccc
Confidence            466654 8888776532         3677889999999999999999999999987665  99999999875443322 


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....++..|+|||.+.+..+ +.++|+||+|+++|+|++|+.||.............   ..  ...+....++..+.+
T Consensus       156 ~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~  229 (254)
T cd06627         156 DASVVGTPYWMAPEVIEMSGA-STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV---QD--DHPPLPEGISPELKD  229 (254)
T ss_pred             ccccccchhhcCHhhhcCCCC-CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh---cc--CCCCCCCCCCHHHHH
Confidence            223468889999999877664 455999999999999999999997654322222211   11  112233467899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCccc
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ++.+||..+|++|||+.+++.||||
T Consensus       230 ~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         230 FLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHhCChhhCcCHHHHhcCCCC
Confidence            9999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=3.4e-28  Score=204.24  Aligned_cols=167  Identities=22%  Similarity=0.269  Sum_probs=121.1

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||++.. +|.+++....        ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......  
T Consensus        87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~~~~~~  164 (283)
T cd05080          87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYY  164 (283)
T ss_pred             ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCc--EEEeecccccccCCcchhh
Confidence            676665 7888776432        3677899999999999999999999999987765  99999999875433221  


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH-H---------HHHHHHHhhhcccC
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN-F---------RKTISRIMAVQYKI  137 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~-~---------~~~~~~~~~~~~~~  137 (265)
                        .....++..|+|||.+.+..++ .++||||||+++|+|++|..||........ .         ..............
T Consensus       165 ~~~~~~~~~~~~~~PE~~~~~~~~-~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T cd05080         165 RVREDGDSPVFWYAVECLKENKFS-YASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL  243 (283)
T ss_pred             ccCCCCCCCceeeCHhHhcccCCC-cccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC
Confidence              1122356679999998876665 459999999999999999999865332100 0         00001111111222


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       138 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +....++..+.+++.+||..+|++|||+.++++
T Consensus       244 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         244 PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            334467899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.5e-28  Score=201.24  Aligned_cols=163  Identities=19%  Similarity=0.311  Sum_probs=123.1

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~--~kl~dfg~~~~~~~~~~  155 (256)
T cd05059          78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV--VKVSDFGLARYVLDDQY  155 (256)
T ss_pred             EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc--EEECCcccceecccccc
Confidence            57764 48999886532          3567889999999999999999999999988775  99999999875432211


Q ss_pred             C--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 P--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .  ....++..|+|||.+.+..+.. ++|+||||+++|++++ |+.||..........    .+. .....+.+..++..
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~-~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~  229 (256)
T cd05059         156 TSSQGTKFPVKWAPPEVFDYSRFSS-KSDVWSFGVLMWEVFSEGKMPYERFSNSEVVE----SVS-AGYRLYRPKLAPTE  229 (256)
T ss_pred             cccCCCCCCccccCHHHhccCCCCc-hhhHHHHHHHHHHHhccCCCCCCCCCHHHHHH----HHH-cCCcCCCCCCCCHH
Confidence            1  1122345799999998777654 5999999999999999 899997654432222    111 12223334467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+++.+||..+|++|||+.++++.
T Consensus       230 ~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         230 VYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHHH
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-29  Score=196.50  Aligned_cols=164  Identities=24%  Similarity=0.308  Sum_probs=122.4

Q ss_pred             cccchHHHHHHhcc-------------ccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            4 GVSSLSEFVMLEGS-------------VKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         4 ~~~sL~~~~~~~~~-------------~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ..+||.|.+.++..             ...+.++|.+||+..  ++||||||.|||+.+++.  ++|.|||.+.......
T Consensus       106 ~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~--~vl~D~GS~~~a~i~i  183 (302)
T KOG2345|consen  106 KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGL--PVLMDLGSATQAPIQI  183 (302)
T ss_pred             ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCc--eEEEeccCccccceEe
Confidence            45577777776654             334678899999999  999999999999988665  9999999987543322


Q ss_pred             CCC----------CCcCCCCCcccccccCCcCC--CchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           69 RPK----------STVGTPAYIAPEVLSRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        69 ~~~----------~~~~~~~y~aPE~~~~~~~~--~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ...          ....|..|+|||++.-+...  +.++|||||||++|.|+.|..||........  ...-.+...++.
T Consensus       184 ~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg--SlaLAv~n~q~s  261 (302)
T KOG2345|consen  184 EGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG--SLALAVQNAQIS  261 (302)
T ss_pred             echHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC--eEEEeeeccccc
Confidence            111          22478899999998654332  4559999999999999999999954211000  000012334566


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +|....+|+.+.+||+.||..||.+||++.+++.+
T Consensus       262 ~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  262 IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            77777799999999999999999999999999864

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.95  E-value=6.1e-28  Score=204.82  Aligned_cols=163  Identities=22%  Similarity=0.309  Sum_probs=123.5

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.. +|.+++..+.                         ++.+++.++.|||++||+||||||+||+++.++.  +|
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~--~k  177 (304)
T cd05101         100 VEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNV--MK  177 (304)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCc--EE
Confidence            677755 8998887642                         2457899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++.......   .....++..|+|||++.+..++ .++||||||+++|++++ |..||........ ..   .+
T Consensus       178 l~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~---~~  252 (304)
T cd05101         178 IADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FK---LL  252 (304)
T ss_pred             ECCCccceecccccccccccCCCCCceeeCchhhccCCCC-chhhHHHHHHHHHHHHcCCCCCcccCCHHHH-HH---HH
Confidence            999999875433221   1122356789999999877665 44999999999999998 7888876543222 22   22


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . .......+..++..+.+|+.+||..+|.+|||+.++++.
T Consensus       253 ~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         253 K-EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             H-cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            1 112223344688999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=4.5e-28  Score=204.27  Aligned_cols=146  Identities=23%  Similarity=0.342  Sum_probs=112.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.......   .....++..|+|||.+.+..++ .
T Consensus       132 i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~  208 (290)
T cd05045         132 FAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRK--MKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT-T  208 (290)
T ss_pred             HHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCc--EEeccccccccccCccchhcccCCCCCccccCHHHHccCCcc-h
Confidence            4667899999999999999999999999987765  99999999874432211   1223456789999998776665 5


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++||||||+++|+|++ |..||.+..... +....    ......+.+..++..+.+++.+||..+|.+||++.++++
T Consensus       209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGNPYPGIAPER-LFNLL----KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH----hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            5999999999999998 999997654322 22222    222333444568899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.9e-28  Score=200.80  Aligned_cols=166  Identities=31%  Similarity=0.399  Sum_probs=126.0

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++. .+|.+++...+         ++.+++.++.|||++||+|+||||+||+++.++.  ++|+|||+++.....   
T Consensus        85 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~  162 (264)
T cd06653          85 VEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRIQTICMS  162 (264)
T ss_pred             EEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC--EEECcccccccccccccc
Confidence            46664 48888876543         3567899999999999999999999999987765  999999998754321   


Q ss_pred             -CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           68 -SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                       .......++..|+|||.+.+..++ .++|+|||||++|++++|+.||.........    ............+..+++.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~  237 (264)
T cd06653         163 GTGIKSVTGTPYWMSPEVISGEGYG-RKADVWSVACTVVEMLTEKPPWAEYEAMAAI----FKIATQPTKPMLPDGVSDA  237 (264)
T ss_pred             CccccccCCcccccCHhhhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCccCHHHHH----HHHHcCCCCCCCCcccCHH
Confidence             111234588899999999876654 4599999999999999999999765433222    2222222222233468899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +.++|.+||. +|.+||++.+++.|||.
T Consensus       238 ~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         238 CRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            9999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.95  E-value=5e-28  Score=200.22  Aligned_cols=163  Identities=25%  Similarity=0.341  Sum_probs=124.5

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++..+.           ++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++......
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~--~kl~dfg~~~~~~~~~  151 (257)
T cd05040          74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDK--VKIGDFGLMRALPQNE  151 (257)
T ss_pred             EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCE--EEeccccccccccccc
Confidence            56664 48888886654           2567899999999999999999999999988765  9999999987553321


Q ss_pred             C----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 R----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      .    .....++..|+|||.+.+..++. ++|||||||++|+|++ |+.||...........    +.......+.+..+
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~-~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~  226 (257)
T cd05040         152 DHYVMEEHLKVPFAWCAPESLRTRTFSH-ASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK----IDKEGERLERPEAC  226 (257)
T ss_pred             cceecccCCCCCceecCHHHhcccCcCc-hhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHhcCCcCCCCccC
Confidence            1    11234677899999988777654 4999999999999998 9999976544332222    22222233334467


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +..+.+++.+||..+|.+|||+.++++
T Consensus       227 ~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         227 PQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             CHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.95  E-value=3.8e-28  Score=201.35  Aligned_cols=162  Identities=22%  Similarity=0.345  Sum_probs=124.4

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~--~kl~d~g~~~~~~~~~  158 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLV--CKVADFGLARLIKEDV  158 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCce--EEEccccchhhcCCcc
Confidence            677765 898888642           24567889999999999999999999999988775  9999999986543221


Q ss_pred             C-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 R-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      . .....++..|+|||.+.+..+. .++|+||||+++|+|++ |+.||........+...    . .....+.+..++..
T Consensus       159 ~~~~~~~~~~~~~~PE~~~~~~~~-~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~  232 (261)
T cd05148         159 YLSSDKKIPYKWTAPEAASHGTFS-TKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI----T-AGYRMPCPAKCPQE  232 (261)
T ss_pred             ccccCCCCceEecCHHHHccCCCC-chhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH----H-hCCcCCCCCCCCHH
Confidence            1 1122356679999998876665 45999999999999998 89999775543332222    2 22334444578899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.++|.+||..+|.+|||+.++++
T Consensus       233 ~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         233 IYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.95  E-value=8.4e-28  Score=198.42  Aligned_cols=165  Identities=31%  Similarity=0.387  Sum_probs=127.2

Q ss_pred             Cccc-ccchHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLG-VSSLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~-~~sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||+. +.+|.+++..+             .++.+++.++.|||++|++||||+|+||+++.++.  +||+|||++.....
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~--~kl~d~g~~~~~~~  155 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDL--VKIGDLGISKVLKK  155 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCc--EEEeeccchhhhcc
Confidence            5665 44888887652             23556888999999999999999999999988665  99999999875544


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      . ......++..|+|||.+.+..++ .++|+||||+++|+|++|+.||........    ...+..... .+....++.+
T Consensus       156 ~-~~~~~~~~~~~~~Pe~~~~~~~~-~~~D~~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~  228 (256)
T cd08530         156 N-MAKTQIGTPHYMAPEVWKGRPYS-YKSDIWSLGCLLYEMATFAPPFEARSMQDL----RYKVQRGKY-PPIPPIYSQD  228 (256)
T ss_pred             C-CcccccCCccccCHHHHCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCCC-CCCchhhCHH
Confidence            3 33345688899999999877665 459999999999999999999977653221    112222221 1222367889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +++++.+||..+|.+||++.++++||++
T Consensus       229 ~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         229 LQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=9e-28  Score=199.29  Aligned_cols=162  Identities=19%  Similarity=0.281  Sum_probs=123.2

Q ss_pred             Cccc-ccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++ +++|.+++..+.           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~  157 (261)
T cd05068          80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNI--CKVADFGLARVIKEDI  157 (261)
T ss_pred             eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCC--EEECCcceEEEccCCc
Confidence            6787 569999986543           3566889999999999999999999999998776  9999999987554221


Q ss_pred             CCC--CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RPK--STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ...  ....+..|+|||.+.+..++. ++|+||||+++|+|++ |+.||.+........    .+. .....+....++.
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~~  231 (261)
T cd05068         158 YEAREGAKFPIKWTAPEAALYNRFSI-KSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ----QVD-QGYRMPCPPGCPK  231 (261)
T ss_pred             ccccCCCcCceeccCccccccCCCCc-hhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH----HHH-cCCCCCCCCcCCH
Confidence            111  112345799999988766654 4999999999999999 999997754332222    211 1223344446789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+||++.++++
T Consensus       232 ~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         232 ELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHHH
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=6.8e-28  Score=199.82  Aligned_cols=162  Identities=20%  Similarity=0.301  Sum_probs=121.1

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+          .++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++.......
T Consensus        73 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~--~kl~dfg~~~~~~~~~~  150 (257)
T cd05115          73 MEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHY--AKISDFGLSKALGADDS  150 (257)
T ss_pred             EEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCc--EEeccCCccccccCCcc
Confidence            577654 888887642          23667889999999999999999999999987765  99999999874332211


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .    ....++..|+|||.+.+..++ .++|+|||||++|++++ |..||......... ..+   . .....+.+..++
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~---~-~~~~~~~~~~~~  224 (257)
T cd05115         151 YYKARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM-SFI---E-QGKRLDCPAECP  224 (257)
T ss_pred             ceeccCCCCCCcccCCHHHHccCCCC-chhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH-HHH---H-CCCCCCCCCCCC
Confidence            1    111235689999998876664 45999999999999996 99999876543322 111   1 112223334678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +++.++|.+||..+|++||++.++.+
T Consensus       225 ~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         225 PEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.95  E-value=4.8e-28  Score=203.16  Aligned_cols=146  Identities=21%  Similarity=0.340  Sum_probs=111.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.......   .....+++.|+|||.+.+..++ .
T Consensus       127 ~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~--~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~  203 (280)
T cd05092         127 IASQIASGMVYLASLHFVHRDLATRNCLVGQGLV--VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT-T  203 (280)
T ss_pred             HHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC--EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcC-c
Confidence            3567889999999999999999999999987665  99999999864332211   1222356789999999887765 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++|||||||++|+|++ |..||.............    .. .....+..+++.+.+||.+||..||.+||++.++++
T Consensus       204 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         204 ESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT----QG-RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH----cC-ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            5999999999999998 899997655433222211    11 122233467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.95  E-value=5.7e-28  Score=205.36  Aligned_cols=163  Identities=22%  Similarity=0.323  Sum_probs=122.6

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.. +|.+++..+.                         ++.+++.++.|||++||+||||||+||+++.++.  +|
T Consensus       103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~--~k  180 (307)
T cd05098         103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MK  180 (307)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCc--EE
Confidence            577765 8998887542                         2567889999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCCC---CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++........   ....++..|+|||.+.+..++ .++|+|||||++|+|++ |..||..... ......+.  
T Consensus       181 L~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~--  256 (307)
T cd05098         181 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLK--  256 (307)
T ss_pred             ECCCcccccccccchhhccccCCCccceeChHHhccCCCC-cHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHH--
Confidence            9999998754322111   112245689999999876664 55999999999999998 8888866432 22222221  


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                        .....+.+..++.++.+||.+||..+|.+|||+.+++++
T Consensus       257 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         257 --EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             --cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence              122233344678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.95  E-value=5.4e-28  Score=202.44  Aligned_cols=169  Identities=25%  Similarity=0.305  Sum_probs=128.2

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.+++...        ..+.+++.++.+||++|++|+||+|+||+++.++.  ++|+|||++....... ..
T Consensus        81 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~--~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06641          81 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCC--EEEeecccceecccchhhh
Confidence            567765 777776532        24677889999999999999999999999987765  9999999986543322 12


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....++..|+|||.+.+...+ .++|+|||||++|+|++|..||........    ...+... ........++..+.++
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~  232 (277)
T cd06641         159 NTFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELAKGEPPHSELHPMKV----LFLIPKN-NPPTLEGNYSKPLKEF  232 (277)
T ss_pred             ccccCCccccChhhhccCCCC-chhhHHHHHHHHHHHHcCCCCCCccchHHH----HHHHhcC-CCCCCCcccCHHHHHH
Confidence            234578899999998776654 459999999999999999999976443221    1111111 1111223578899999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +.+||..+|.+||++.++++||||.+.
T Consensus       233 i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         233 VEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             HHHHccCChhhCcCHHHHHhCHHHhhh
Confidence            999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=6.7e-28  Score=200.46  Aligned_cols=161  Identities=20%  Similarity=0.268  Sum_probs=117.3

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-----CcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-----PRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-----~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ +|..++..+.          ++.+++.++.|||++||+||||||+|||++.++.     ..++++|||++...
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~  162 (262)
T cd05077          83 EEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITV  162 (262)
T ss_pred             EecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence            577765 6776665432          4678899999999999999999999999975442     13899999988643


Q ss_pred             CCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHH-hCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ..   .....++..|+|||.+......+.++|||||||++|+|+ +|..||........ ..    .......  .....
T Consensus       163 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~----~~~~~~~--~~~~~  232 (262)
T cd05077         163 LS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ER----FYEGQCM--LVTPS  232 (262)
T ss_pred             cC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HH----HHhcCcc--CCCCC
Confidence            22   223457888999999875444455699999999999998 58888866432211 11    1111111  12234


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++.+||.+||..||.+||++.+|+++
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            6789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.95  E-value=6.3e-28  Score=199.65  Aligned_cols=162  Identities=20%  Similarity=0.279  Sum_probs=121.8

Q ss_pred             Ccccc-cchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||.++.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~--~kl~d~g~~~~~~~~~~  155 (256)
T cd05114          78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGV--VKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCe--EEECCCCCccccCCCce
Confidence            67775 4888887642          23567889999999999999999999999987765  99999998875432221


Q ss_pred             C--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 P--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .  ....++..|+|||.+.+..+. .++|+||||+++|+|++ |+.||...........    +.... ....+...+..
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~----i~~~~-~~~~~~~~~~~  229 (256)
T cd05114         156 TSSSGAKFPVKWSPPEVFNFSKYS-SKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM----ISRGF-RLYRPKLASMT  229 (256)
T ss_pred             eccCCCCCchhhCChhhcccCccc-hhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----HHCCC-CCCCCCCCCHH
Confidence            1  122345689999999876665 45999999999999999 8999977654332222    22211 22223346788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+++.+||..+|.+||++.++++
T Consensus       230 ~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         230 VYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.95  E-value=5.7e-28  Score=200.40  Aligned_cols=162  Identities=20%  Similarity=0.325  Sum_probs=123.1

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....           ++.+++.++.|||+++++||||||+||+++.++.  +||+|||++.......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~--~~l~dfg~~~~~~~~~  157 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM--CKIADFGLARVIEDNE  157 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCc--EEECCCccceecCCCc
Confidence            57764 58988886532           3567889999999999999999999999988765  9999999987543322


Q ss_pred             C--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 R--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .  .....++..|+|||.+.+..++ .++|+|||||++|+|++ |+.||...........    +. .....+....++.
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~  231 (261)
T cd05072         158 YTAREGAKFPIKWTAPEAINFGSFT-IKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA----LQ-RGYRMPRMENCPD  231 (261)
T ss_pred             eeccCCCccceecCCHHHhccCCCC-hhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH----HH-cCCCCCCCCCCCH
Confidence            1  1122356689999998876664 45999999999999998 9999976543322221    11 1233444456889


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|++||+++++++
T Consensus       232 ~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         232 ELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=8e-28  Score=199.39  Aligned_cols=161  Identities=19%  Similarity=0.240  Sum_probs=119.4

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC------CcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA------PRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~------~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.      +.++++|||++..
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            688766 8988887543          3567889999999999999999999999976543      1379999998764


Q ss_pred             CCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCC-CCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           64 SLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA-YPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        64 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      ...   .....++..|+|||++.+....+.++|+|||||++|+|++|. .||...... .....    .......|.  .
T Consensus       158 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~~~~~----~~~~~~~~~--~  227 (258)
T cd05078         158 VLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-KKLQF----YEDRHQLPA--P  227 (258)
T ss_pred             cCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-HHHHH----HHccccCCC--C
Confidence            332   223467889999999987544455699999999999999985 555443322 11111    111222222  4


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.++.+||.+||..+|++|||+.++++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         228 KWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             CcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            56889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=8.2e-28  Score=205.04  Aligned_cols=162  Identities=22%  Similarity=0.322  Sum_probs=121.2

Q ss_pred             Ccccc-cchHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGV-SSLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++. ++|.+++..+.                         ++.+++.++.|||++||+||||||+|||++.++.  +|
T Consensus        97 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~--~k  174 (314)
T cd05099          97 VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNV--MK  174 (314)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCc--EE
Confidence            56664 48999887532                         2457899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++.......   .....++..|+|||.+.+..++ .++|||||||++|+|++ |..||........ ...+.  
T Consensus       175 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~--  250 (314)
T cd05099         175 IADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYT-HQSDVWSFGILMWEIFTLGGSPYPGIPVEEL-FKLLR--  250 (314)
T ss_pred             EccccccccccccccccccccCCCCccccCHHHHccCCcC-ccchhhHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH--
Confidence            999999975432211   1112244679999999876665 45999999999999999 8899976543222 22221  


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                       . ......+..++.++++++.+||..+|.+|||+.++++
T Consensus       251 -~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         251 -E-GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             -c-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence             1 1122233467889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.95  E-value=6.1e-28  Score=200.25  Aligned_cols=162  Identities=21%  Similarity=0.289  Sum_probs=123.4

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||+++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~--~~l~dfg~~~~~~~~~  156 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLV--CKIADFGLARLIEDNE  156 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCe--EEECCCccceEccCCc
Confidence            677765 8988886532           3567889999999999999999999999988765  9999999986543222


Q ss_pred             CC--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RP--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ..  ....++..|+|||.+.+..++ .++|+||||+++|+|++ |..||.+.........    +. .....+.+..++.
T Consensus       157 ~~~~~~~~~~~~y~~Pe~~~~~~~~-~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~  230 (260)
T cd05069         157 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ----VE-RGYRMPCPQGCPE  230 (260)
T ss_pred             ccccCCCccchhhCCHHHhccCCcC-hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HH-cCCCCCCCcccCH
Confidence            11  122356789999998776654 55999999999999999 8999987554332222    11 1223334446789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+||++.++++
T Consensus       231 ~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         231 SLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=7.3e-28  Score=199.38  Aligned_cols=162  Identities=24%  Similarity=0.324  Sum_probs=122.9

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||.+||+||||||+||+++.++.  +||+|||+++........
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~--~kl~df~~~~~~~~~~~~  151 (257)
T cd05060          74 MELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ--AKISDFGMSRALGAGSDY  151 (257)
T ss_pred             EEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCc--EEeccccccceeecCCcc
Confidence            56654 48998887644         4677899999999999999999999999988775  999999998754332221


Q ss_pred             C----CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           71 K----STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        71 ~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .    ...++..|+|||.+.+..+.. ++|||||||++|++++ |..||....... ....+   . .....+.+..++.
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~~l~~~~~~g~~p~~~~~~~~-~~~~~---~-~~~~~~~~~~~~~  225 (257)
T cd05060         152 YRATTAGRWPLKWYAPECINYGKFSS-KSDVWSYGVTLWEAFSYGAKPYGEMKGAE-VIAML---E-SGERLPRPEECPQ  225 (257)
T ss_pred             cccccCccccccccCHHHhcCCCCCc-cchHHHHHHHHHHHHcCCCCCcccCCHHH-HHHHH---H-cCCcCCCCCCCCH
Confidence            1    112346799999998777654 5999999999999998 999997654322 22222   1 1222344456889


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .++++|.+||..+|.+||++.++++
T Consensus       226 ~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         226 EIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.95  E-value=7.3e-28  Score=199.45  Aligned_cols=163  Identities=21%  Similarity=0.303  Sum_probs=122.8

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          .+.+++.++.|||++||+|+||||.||+++.++.  +||+|||.++.......
T Consensus        78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~--~kl~d~g~~~~~~~~~~  155 (256)
T cd05113          78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGC--VKVSDFGLSRYVLDDEY  155 (256)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCC--EEECCCccceecCCCce
Confidence            677754 7888876532          3667889999999999999999999999987765  99999999875433221


Q ss_pred             C--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 P--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .  ....++..|+|||.+.+..+. .++|+|||||++|+|++ |..||............    ... ...+.....+..
T Consensus       156 ~~~~~~~~~~~y~~pe~~~~~~~~-~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~  229 (256)
T cd05113         156 TSSVGSKFPVRWSPPEVLLYSKFS-SKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV----SQG-LRLYRPHLASEK  229 (256)
T ss_pred             eecCCCccChhhCCHHHHhcCccc-chhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----hcC-CCCCCCCCCCHH
Confidence            1  122355689999999876665 45999999999999998 99999765543322222    111 122223356889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +++++.+||..+|.+||++.+++.+
T Consensus       230 ~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         230 VYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHHh
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=9.1e-28  Score=198.17  Aligned_cols=162  Identities=25%  Similarity=0.369  Sum_probs=119.9

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++...+          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++........
T Consensus        72 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~~~  149 (252)
T cd05084          72 MELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNV--LKISDFGMSREEEDGVY  149 (252)
T ss_pred             EeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCc--EEECccccCcccccccc
Confidence            677654 8988886533          3567889999999999999999999999987765  99999999874332111


Q ss_pred             CC---CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 PK---STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ~~---~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ..   ....+..|+|||.+.+..+. .++|+|||||++|+|++ |..||....... ....+.    .....+.+..++.
T Consensus       150 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-~~~~~~----~~~~~~~~~~~~~  223 (252)
T cd05084         150 ASTGGMKQIPVKWTAPEALNYGRYS-SESDVWSFGILLWEAFSLGAVPYANLSNQQ-TREAIE----QGVRLPCPELCPD  223 (252)
T ss_pred             cccCCCCCCceeecCchhhcCCCCC-hHHHHHHHHHHHHHHHhCCCCCccccCHHH-HHHHHH----cCCCCCCcccCCH
Confidence            11   11224569999999877765 45999999999999998 888886644322 111111    1222333446789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+|+.+||..+|++|||+.++++
T Consensus       224 ~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         224 AVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.95  E-value=7.1e-28  Score=199.72  Aligned_cols=165  Identities=28%  Similarity=0.345  Sum_probs=123.8

Q ss_pred             Cccccc-chHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..             ..++.+++.++.|||++|++|+||+|+||+++.+   .++|+|||+++....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~~~l~d~g~~~~~~~  157 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---LLKIGDFGVSRLLMG  157 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---CEeecccCceeecCC
Confidence            466654 77776653             1235678899999999999999999999999753   399999999875433


Q ss_pred             CCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ... .....++..|+|||.+.+..++.+ +|+||||+++|+|++|..||.......    ......... .......++.
T Consensus       158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~  231 (260)
T cd08222         158 SCDLATTFTGTPYYMSPEALKHQGYDSK-SDIWSLGCILYEMCCLAHAFEGQNFLS----VVLRIVEGP-TPSLPETYSR  231 (260)
T ss_pred             CcccccCCCCCcCccCHHHHccCCCCch-hhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHcCC-CCCCcchhcH
Confidence            222 223457889999999877666544 999999999999999999997543322    222222111 1112235788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .+.++|.+||..+|++||++.++++||||
T Consensus       232 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         232 QLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=1e-27  Score=198.29  Aligned_cols=160  Identities=20%  Similarity=0.324  Sum_probs=123.0

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||.++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~--~~l~d~g~~~~~~~~~  156 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLV--AKVSDFGLAKEASQGQ  156 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCC--EEEccccccccccccc
Confidence            677764 8999887554           4677899999999999999999999999987765  9999999987553221


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                        .....+..|+|||.+.+..+. .++|+||||+++|++++ |..||....... ....+   . .......+..+++.+
T Consensus       157 --~~~~~~~~~~ape~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~---~-~~~~~~~~~~~~~~~  228 (256)
T cd05039         157 --DSGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPHV---E-KGYRMEAPEGCPPEV  228 (256)
T ss_pred             --ccCCCcccccCchhhcCCcCC-cHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH---h-cCCCCCCccCCCHHH
Confidence              123356679999998776665 45999999999999997 999997654322 22211   1 122223334678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .++|.+||..+|.+|||+.++++
T Consensus       229 ~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         229 YKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHHHHHHhccChhhCcCHHHHHH
Confidence            99999999999999999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.95  E-value=8.3e-28  Score=199.79  Aligned_cols=162  Identities=19%  Similarity=0.284  Sum_probs=122.7

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  +||+|||.++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~--~~L~dfg~~~~~~~~~  156 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNE  156 (262)
T ss_pred             EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCc--EEeccCCceeeccccc
Confidence            577665 888888642           23567889999999999999999999999987765  9999999987543322


Q ss_pred             CC--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RP--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ..  ....++..|+|||...+..++ .++|+|||||++|+|++ |..||..........    .+. .....+....++.
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~~  230 (262)
T cd05071         157 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLD----QVE-RGYRMPCPPECPE  230 (262)
T ss_pred             cccccCCcccceecCHhHhccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH----HHh-cCCCCCCccccCH
Confidence            11  123356789999998777665 45999999999999999 888987655433222    111 1222333446889


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+||++.++++
T Consensus       231 ~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         231 SLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHH
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.95  E-value=6.8e-28  Score=200.93  Aligned_cols=147  Identities=21%  Similarity=0.291  Sum_probs=112.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC---CCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++........   .....+..|+|||.+.+..++ .
T Consensus       118 ~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~  194 (273)
T cd05035         118 FMVDIALGMEYLSNRNFIHRDLAARNCMLREDMT--VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT-S  194 (273)
T ss_pred             HHHHHHHHHHHHHhCCeeccccchheEEECCCCe--EEECCccceeeccccccccccccccCCccccCHhhcccCCCC-c
Confidence            3677899999999999999999999999987765  999999998754332211   112346689999998776665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++|||||||++|+|++ |..||.+.......    ..+... .....+..++..+.+++.+||..||.+|||+.+++++
T Consensus       195 ~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         195 KSDVWAFGVTMWEIATRGQTPYPGVENHEIY----DYLRHG-NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHHcC-CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5999999999999999 88999765543322    222211 1223334688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=1.1e-27  Score=203.25  Aligned_cols=163  Identities=25%  Similarity=0.378  Sum_probs=123.7

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....           +..+++.++.|||++||+|+||||+||+++.++.  ++|+|||+++......
T Consensus       118 ~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~~l~dfg~~~~~~~~~  195 (302)
T cd05055         118 TEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI--VKICDFGLARDIMNDS  195 (302)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCe--EEECCCcccccccCCC
Confidence            56655 58988886532           2457888999999999999999999999987665  9999999987543322


Q ss_pred             C---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 R---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .   .....++..|+|||.+.+..++ .++||||+||++|+|++ |..||........+.....    .....+.....+
T Consensus       196 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~  270 (302)
T cd05055         196 NYVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK----EGYRMAQPEHAP  270 (302)
T ss_pred             ceeecCCCCcccccCCHhhhccCCCC-cHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH----cCCcCCCCCCCC
Confidence            1   1123456789999999877765 45999999999999998 9999987655443333222    222223334578


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.+++.+||..+|++|||+.++++
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            89999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=8.7e-28  Score=200.30  Aligned_cols=164  Identities=23%  Similarity=0.353  Sum_probs=118.0

Q ss_pred             Ccccc-cchHHHHHHh--------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGV-SSLSEFVMLE--------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~-~sL~~~~~~~--------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++. ++|.+++...              .++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++...
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~--~kL~dfg~~~~~~  151 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLT--VKIGDYGLSHNKY  151 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc--EEECCcccccccc
Confidence            67776 4898887642              23457888999999999999999999999987765  9999999986432


Q ss_pred             CCCC---CCCCcCCCCCcccccccCCc------CCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcc
Q 024572           66 LHSR---PKSTVGTPAYIAPEVLSRRE------YDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQY  135 (265)
Q Consensus        66 ~~~~---~~~~~~~~~y~aPE~~~~~~------~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~  135 (265)
                      ....   .....++..|+|||++.+..      ..+.++|+||||+++|+|++ |+.||.............   .....
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~~~~  228 (269)
T cd05087         152 KEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV---REQQL  228 (269)
T ss_pred             CcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh---hcccC
Confidence            2211   12234678899999986432      12456999999999999996 999997655433222211   11112


Q ss_pred             cCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          136 KIPD---YVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       136 ~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.   ....+..+.+++.+|+ .+|++|||+.+|+.
T Consensus       229 ~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         229 KLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            2221   1246788999999998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.95  E-value=8.2e-28  Score=199.42  Aligned_cols=162  Identities=20%  Similarity=0.277  Sum_probs=121.7

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++.......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~--~~l~dfg~~~~~~~~~  156 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLV--CKIADFGLARLIEDNE  156 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCce--EEeCCceeeeeccCcc
Confidence            566654 888887642           23567889999999999999999999999987765  9999999987543322


Q ss_pred             CC--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RP--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ..  ....++..|+|||.+.+..++ .++|+||||+++|+|++ |..||..........    .+. .....+.+...+.
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~~  230 (260)
T cd05070         157 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELVTKGRVPYPGMNNREVLE----QVE-RGYRMPCPQDCPI  230 (260)
T ss_pred             cccccCCCCCccccChHHHhcCCCc-chhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH----HHH-cCCCCCCCCcCCH
Confidence            11  122345679999998776665 45999999999999999 899997654332222    211 1223344456789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+|+.+||..+|.+|||+.++.+
T Consensus       231 ~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         231 SLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHH
Confidence            9999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=6.4e-28  Score=199.44  Aligned_cols=163  Identities=26%  Similarity=0.367  Sum_probs=124.3

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+|+||||+||+++.++.  ++|+|||.+.......
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~--~~l~dfg~~~~~~~~~  154 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK--VKLGDFGSARLLTSPG  154 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCc--EEEcccCcceeecccc
Confidence            567654 788777542           13677899999999999999999999999987765  9999999986543322


Q ss_pred             C-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 R-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      . .....++..|+|||++.+..++ .++|+||||+++|+|++|..||........    ...+..... .+.+..++..+
T Consensus       155 ~~~~~~~~~~~~~aPE~~~~~~~~-~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~  228 (255)
T cd08219         155 AYACTYVGTPYYVPPEIWENMPYN-NKSDIWSLGCILYELCTLKHPFQANSWKNL----ILKVCQGSY-KPLPSHYSYEL  228 (255)
T ss_pred             cccccccCCccccCHHHHccCCcC-chhhhhhhchhheehhhccCCCCCCCHHHH----HHHHhcCCC-CCCCcccCHHH
Confidence            2 2234688899999999877664 459999999999999999999976543222    222222222 22334678899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+||.+||..||.+|||+.++++-
T Consensus       229 ~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         229 RSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHhCCcccCCCHHHHhhc
Confidence            999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.3e-27  Score=202.06  Aligned_cols=167  Identities=21%  Similarity=0.241  Sum_probs=121.4

Q ss_pred             Cccccc-chHHHHHHhc---------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEecc
Q 024572            1 MQLGVS-SLSEFVMLEG---------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDF   58 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Df   58 (265)
                      ||++.+ +|.+++..+.                     ++.+++.++.|||++|++||||||+||+++.++.  +||+||
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~--~kl~df  173 (295)
T cd05097          96 TEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYT--IKIADF  173 (295)
T ss_pred             EecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCc--EEeccc
Confidence            677765 8888876432                     3567889999999999999999999999987765  999999


Q ss_pred             CCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHHHHHhh-
Q 024572           59 GYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV--GAYPFEDQEDPKNFRKTISRIMA-  132 (265)
Q Consensus        59 g~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~~-  132 (265)
                      |++........   .....++..|+|||.+.+..++ .++|+|||||++|+|++  +..||.................. 
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  252 (295)
T cd05097         174 GMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFT-TASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQ  252 (295)
T ss_pred             ccccccccCcceeccCcCcCceeecChhhhccCCcC-chhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhc
Confidence            99875432211   1122346789999998876664 55999999999999988  66788765543332222111111 


Q ss_pred             -hcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          133 -VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       133 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                       ..........++..+.+|+.+||..+|.+|||+.++++
T Consensus       253 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         253 GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence             11112223357889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.95  E-value=9.2e-28  Score=199.70  Aligned_cols=165  Identities=24%  Similarity=0.355  Sum_probs=123.0

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++...             .++.+++.++.|||++||+|+||||+||+++.++.  ++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~--~~l~dfg~~~~~~~  158 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSS  158 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC--EEECcchhhhcccc
Confidence            566655 888877531             12567889999999999999999999999987765  99999998865433


Q ss_pred             CCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ... .....++..|+|||.+.+..++ .++|+||||+++|+|++|..||......  .......+............++.
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSE  235 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCcc-chhhHHHHHHHHHHHHhCCCCcccccch--HHHHhhhhhcCCCCCCCcccccH
Confidence            222 2234688899999999877665 4599999999999999999999764322  12222222222222222335788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .++++|.+||..+|.+|||+.+|++
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHH
Confidence            9999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=6.2e-28  Score=200.72  Aligned_cols=166  Identities=24%  Similarity=0.351  Sum_probs=122.9

Q ss_pred             Cccccc-chHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..             ..++.+++.++.|||++||+||||||+||+++.++.  ++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~--~~l~d~g~~~~~~~  158 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSS  158 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCC--EEECccccceeccc
Confidence            566665 78877642             123567889999999999999999999999987765  99999998875433


Q ss_pred             CCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ... .....++..|+|||.+.+..++ .++|+||+|+++|+|++|+.||......  .......+............++.
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~~~-~~~Di~slG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08228         159 KTTAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMN--LFSLCQKIEQCDYPPLPTEHYSE  235 (267)
T ss_pred             hhHHHhcCCCCccccChhhhccCCCC-chhhHHHHHHHHHHHhcCCCCCcccccc--HHHHHHHHhcCCCCCCChhhcCH
Confidence            221 1234688899999999877665 4599999999999999999999664321  12222222222221111224678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.++|.+||..+|.+||++.++++.
T Consensus       236 ~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         236 KLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            89999999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.95  E-value=9e-28  Score=202.76  Aligned_cols=167  Identities=22%  Similarity=0.272  Sum_probs=121.8

Q ss_pred             Ccccc-cchHHHHHHhc--------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccC
Q 024572            1 MQLGV-SSLSEFVMLEG--------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFG   59 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~--------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg   59 (265)
                      ||++. ++|.+++....                    ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~--~~l~dfg  175 (296)
T cd05051          98 MEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYT--IKIADFG  175 (296)
T ss_pred             EecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCc--eEEcccc
Confidence            45554 47888876543                    3567899999999999999999999999988765  9999999


Q ss_pred             CcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHHHHHh--h
Q 024572           60 YSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV--GAYPFEDQEDPKNFRKTISRIM--A  132 (265)
Q Consensus        60 ~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~--~  132 (265)
                      +++......   ......++..|+|||.+.+..+. .++|||||||++|+|++  +..||........+........  .
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  254 (296)
T cd05051         176 MSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFT-TKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDG  254 (296)
T ss_pred             ceeecccCcceeecCcCCCCceecCHHHhhcCCCC-ccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccccc
Confidence            987543222   11233456789999998876665 45999999999999998  7788876554333222221100  1


Q ss_pred             hcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          133 VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       133 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .....+....++.++.+++.+||..+|.+|||+.++++
T Consensus       255 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         255 RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            11112233456789999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.95  E-value=1.2e-27  Score=199.02  Aligned_cols=163  Identities=21%  Similarity=0.330  Sum_probs=123.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||+++.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~--~~l~dfg~~~~~~~~~~  161 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLV--CKVSDFGLSRRLEDSEA  161 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCC--EEECccchhhccccccc
Confidence            677755 8988876532          3567888999999999999999999999988765  99999999876542111


Q ss_pred             C---CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 P---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .   ....++..|+|||.+.+..++. ++|+||||+++|+|++ |..||........    ...+. .....+....++.
T Consensus       162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~-~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~~  235 (266)
T cd05033         162 TYTTKGGKIPIRWTAPEAIAYRKFTS-ASDVWSFGIVMWEVMSYGERPYWDMSNQDV----IKAVE-DGYRLPPPMDCPS  235 (266)
T ss_pred             ceeccCCCCCccccChhhhccCCCcc-ccchHHHHHHHHHHHccCCCCCCCCCHHHH----HHHHH-cCCCCCCCCCCCH
Confidence            1   1123456899999998777654 4999999999999998 9999976543322    12221 2223344456889


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.+++.+||..+|++||++.+++++
T Consensus       236 ~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         236 ALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.95  E-value=1.3e-27  Score=205.55  Aligned_cols=163  Identities=23%  Similarity=0.315  Sum_probs=122.7

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++.+++.++.|||++||+||||||+|||++.++.  +|
T Consensus        97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~--~k  174 (334)
T cd05100          97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNV--MK  174 (334)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc--EE
Confidence            566654 8999887532                         2457899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++.......   .....++..|+|||++.+..++. ++|||||||++|+|++ |..||........ ..   .+
T Consensus       175 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~---~~  249 (334)
T cd05100         175 IADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTH-QSDVWSFGVLLWEIFTLGGSPYPGIPVEEL-FK---LL  249 (334)
T ss_pred             ECCcccceecccccccccccCCCcCceEcCHHHhccCCcCc-hhhhHHHHHHHHHHHhcCCCCCCCCCHHHH-HH---HH
Confidence            999999875432221   11123456799999998777654 4999999999999998 8889876543222 22   11


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . .....+.+..++..+.+++.+||..+|.+|||+.+++++
T Consensus       250 ~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         250 K-EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             H-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            1 122233344678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.95  E-value=1.9e-27  Score=198.24  Aligned_cols=167  Identities=20%  Similarity=0.289  Sum_probs=119.1

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++....             ++.+++.++.|||+++|+||||||+|||++.++.  +||+|||++.....
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~--~~l~Dfg~~~~~~~  151 (268)
T cd05086          74 FEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT--VKVGDYGIGPSRYK  151 (268)
T ss_pred             EecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc--EEecccccccccCc
Confidence            678775 8998886532             2456888999999999999999999999987765  99999998753221


Q ss_pred             C---CCCCCCcCCCCCcccccccCCc------CCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           67 H---SRPKSTVGTPAYIAPEVLSRRE------YDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        67 ~---~~~~~~~~~~~y~aPE~~~~~~------~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      .   .......++..|+|||++....      ..+.++|||||||++|+|++ |..||........+.............
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  231 (268)
T cd05086         152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK  231 (268)
T ss_pred             chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            1   1122346788999999985321      12345899999999999997 577887655444333333221111111


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ......+++.+.+++..|| .+|.+||++.++++
T Consensus       232 ~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         232 PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            1122347888999999999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=5.4e-28  Score=189.08  Aligned_cols=155  Identities=21%  Similarity=0.240  Sum_probs=112.7

Q ss_pred             cchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcC
Q 024572            6 SSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVG   75 (265)
Q Consensus         6 ~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~   75 (265)
                      ++|.+++..+          .++.+++.+|.|||+++      ||+|||++.++.  +|+  ||+++.....    ...|
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~--~~~--fG~~~~~~~~----~~~g   66 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGL--LKL--DGSVAFKTPE----QSRV   66 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccc--eee--ccceEeeccc----cCCC
Confidence            3566666543          34778999999999998      999999987765  888  9998754322    2368


Q ss_pred             CCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCCCCH--HHHHHH
Q 024572           76 TPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQ--DCRNLL  151 (265)
Q Consensus        76 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~li  151 (265)
                      ++.|+|||++.+..+. .++|||||||++|+|++|+.||............+..........  +....++.  .++++|
T Consensus        67 ~~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (176)
T smart00750       67 DPYFMAPEVIQGQSYT-EKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM  145 (176)
T ss_pred             cccccChHHhcCCCCc-chhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence            8999999999888775 459999999999999999999976543222222221111111000  11112333  689999


Q ss_pred             HHhcccCCCCCCCHHHHhcCcccC
Q 024572          152 SRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       152 ~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      .+||..+|.+||++.++++|+|+.
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999999999999874

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.95  E-value=1.7e-27  Score=201.39  Aligned_cols=167  Identities=21%  Similarity=0.262  Sum_probs=122.0

Q ss_pred             Ccccc-cchHHHHHHh--------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccC
Q 024572            1 MQLGV-SSLSEFVMLE--------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFG   59 (265)
Q Consensus         1 me~~~-~sL~~~~~~~--------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg   59 (265)
                      ||++. ++|.+++...                    .++.+++.++.|||++||+||||||+|||++.++.  ++|+|||
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg  175 (296)
T cd05095          98 TEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYT--IKIADFG  175 (296)
T ss_pred             EEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCC--EEeccCc
Confidence            56665 4898888653                    23567889999999999999999999999987665  9999999


Q ss_pred             CcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHHHHHh--h
Q 024572           60 YSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV--GAYPFEDQEDPKNFRKTISRIM--A  132 (265)
Q Consensus        60 ~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~--~  132 (265)
                      +++.......   ......+..|++||...+..++ .++|+|||||++|+|++  |..||.................  .
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  254 (296)
T cd05095         176 MSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFT-TASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQG  254 (296)
T ss_pred             ccccccCCcceeccCcCcCccccCCHHHHhcCCcc-chhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcc
Confidence            9875432221   1122345789999988776664 45999999999999998  7788876554333222111110  1


Q ss_pred             hcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          133 VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       133 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .....+.+..++..+.+|+.+||..||.+||++.++++
T Consensus       255 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         255 RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            11123344467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.95  E-value=1.4e-27  Score=206.10  Aligned_cols=147  Identities=24%  Similarity=0.362  Sum_probs=111.5

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCch
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKL   94 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~   94 (265)
                      ..+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......   .....++..|+|||.+.+..++. +
T Consensus       185 ~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~  261 (343)
T cd05103         185 SFQVAKGMEFLASRKCIHRDLAARNILLSENNV--VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-Q  261 (343)
T ss_pred             HHHHHHHHHHHHhCCeecCCCccCeEEEcCCCc--EEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCc-h
Confidence            457899999999999999999999999987765  99999999875422211   11223556799999988776654 5


Q ss_pred             HhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           95 ADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        95 ~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +||||||+++|+|++ |..||............+.    .....+.+..+++.+.+++.+||..+|.+|||+.++++|
T Consensus       262 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         262 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             hhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh----ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999997 9999977544333222221    111222233467899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.95  E-value=5.6e-28  Score=181.93  Aligned_cols=163  Identities=23%  Similarity=0.360  Sum_probs=129.2

Q ss_pred             HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CCCCCcCCCCCcccccccCCcCCC
Q 024572           14 LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKSTVGTPAYIAPEVLSRREYDG   92 (265)
Q Consensus        14 ~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~   92 (265)
                      .+..+-|++.++.++|++++.||||||.|+||+.++.  +||+|||+++.+.... .....+.|.+|++|.++.+...++
T Consensus       103 ~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge--lkladfglarafgipvrcysaevvtlwyrppdvlfgakly~  180 (292)
T KOG0662|consen  103 VRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE--LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS  180 (292)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc--EEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhc
Confidence            3445677899999999999999999999999998887  9999999998665443 233456899999999999988777


Q ss_pred             chHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcc-c------CCCC----------------CCCCHHHH
Q 024572           93 KLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQY-K------IPDY----------------VHISQDCR  148 (265)
Q Consensus        93 ~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~-~------~~~~----------------~~~~~~~~  148 (265)
                      ...|+||.||++.++.. |++.|.+.+-.+++.++...+..... .      .|++                +.++..-+
T Consensus       181 tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~gr  260 (292)
T KOG0662|consen  181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGR  260 (292)
T ss_pred             cchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhH
Confidence            77999999999999986 78888887777777666554432211 1      1111                12345578


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +|+.++|.-+|.+|++++.+++||||....
T Consensus       261 dllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  261 DLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             HHHHHHhccCcccccCHHHHhcCccccccC
Confidence            999999999999999999999999997643

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=2.5e-27  Score=196.51  Aligned_cols=163  Identities=21%  Similarity=0.282  Sum_probs=118.3

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++. ++|.+++....          ++.+++.++.|||+++|+||||||+|||++.++.  +||+|||+++...... 
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~--~kl~dfg~~~~~~~~~~  153 (262)
T cd05058          76 LPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFT--VKVADFGLARDIYDKEY  153 (262)
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc--EEECCccccccccCCcc
Confidence            45554 48888876432          2457899999999999999999999999987765  9999999987433211 


Q ss_pred             ----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 ----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG-AYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                          ......++..|+|||.+.+..++ .++|||||||++|+|++| .+||.......    ....+... ...+....+
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~  227 (262)
T cd05058         154 YSVHNHTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVDSFD----ITVYLLQG-RRLLQPEYC  227 (262)
T ss_pred             eeecccccCcCCccccChhHhccCccc-hHHHHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHhcC-CCCCCCCcC
Confidence                11122356789999998876665 459999999999999995 55665443222    22222211 122233356


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +..+.+++.+||..+|++||++.++++.
T Consensus       228 ~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         228 PDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            8899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.95  E-value=2.2e-27  Score=196.21  Aligned_cols=160  Identities=21%  Similarity=0.374  Sum_probs=121.9

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++..... 
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~--~kl~Dfg~~~~~~~~-  153 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGV--AKVSDFGLARVGSMG-  153 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCc--EEECCCccceecccc-
Confidence            677764 8988887543           2557889999999999999999999999987765  999999998743221 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       ......+..|+|||.+.+..+. .++|+|||||++|+|++ |+.||....... ....+   . .....+....++..+
T Consensus       154 -~~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-~~~~~---~-~~~~~~~~~~~~~~~  226 (254)
T cd05083         154 -VDNSKLPVKWTAPEALKHKKFS-SKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-VKECV---E-KGYRMEPPEGCPADV  226 (254)
T ss_pred             -CCCCCCCceecCHHHhccCCcC-chhhHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHH---h-CCCCCCCCCcCCHHH
Confidence             1223345689999998776665 45999999999999997 999997754322 22211   1 122233334678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+++.+||..+|.+||++.+++.
T Consensus       227 ~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         227 YVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.95  E-value=1.4e-27  Score=209.78  Aligned_cols=146  Identities=25%  Similarity=0.439  Sum_probs=112.7

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCch
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKL   94 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~   94 (265)
                      +.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.......   .....++..|+|||.+.+..+. .+
T Consensus       243 ~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~--~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~  319 (400)
T cd05105         243 TYQVARGMEFLASKNCVHRDLAARNVLLAQGKI--VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYT-TL  319 (400)
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCE--EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCC-ch
Confidence            456889999999999999999999999987765  99999999875432211   1223467789999999877665 45


Q ss_pred             HhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           95 ADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        95 ~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +|||||||++|+|++ |..||........+...+    ......+....++..+.+++.+||..+|++|||+.++.+
T Consensus       320 ~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         320 SDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI----KSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             hhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH----hcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            999999999999997 999997654333222222    222233444568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=4.4e-27  Score=193.79  Aligned_cols=162  Identities=22%  Similarity=0.312  Sum_probs=120.2

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|+|++|++||||||+||+++.++.  +||+|||++........
T Consensus        71 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~--~~l~d~g~~~~~~~~~~  148 (250)
T cd05085          71 MELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNV--LKISDFGMSRQEDDGIY  148 (250)
T ss_pred             EECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCe--EEECCCccceecccccc
Confidence            577654 8888775432          2556778899999999999999999999987765  99999999864332211


Q ss_pred             CC--CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PK--STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ..  ...++..|+|||++.+..+. .++|+||||+++|++++ |..||.........    ..+. .......+..++..
T Consensus       149 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~  222 (250)
T cd05085         149 SSSGLKQIPIKWTAPEALNYGRYS-SESDVWSYGILLWETFSLGVCPYPGMTNQQAR----EQVE-KGYRMSCPQKCPDD  222 (250)
T ss_pred             ccCCCCCCcccccCHHHhccCCCC-chhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH----HHHH-cCCCCCCCCCCCHH
Confidence            11  12345679999999876664 45999999999999998 99999765433221    1111 12222334467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+++.+||..+|.+||++.++++
T Consensus       223 ~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         223 VYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HHHHHHHHcccCcccCCCHHHHHH
Confidence            999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1.8e-27  Score=199.97  Aligned_cols=167  Identities=23%  Similarity=0.296  Sum_probs=121.4

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        87 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~--~~l~dfg~~~~~~~~~~  164 (284)
T cd05079          87 MEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAIETDKE  164 (284)
T ss_pred             EEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCC--EEECCCccccccccCcc
Confidence            67774 58998876432          3567889999999999999999999999987765  99999999875433221


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC-----------hHHHHHHHHHHhhhc
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED-----------PKNFRKTISRIMAVQ  134 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~  134 (265)
                          .....++..|+|||.+.+..+. .++|||||||++|+|++++.|+.....           .......... ....
T Consensus       165 ~~~~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  242 (284)
T cd05079         165 YYTVKDDLDSPVFWYAPECLIQSKFY-IASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV-LEEG  242 (284)
T ss_pred             ceeecCCCCCCccccCHHHhccCCCC-ccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-HHcC
Confidence                1233466789999998876665 459999999999999998766532110           0001111111 1112


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ...+.+..++..+.+|+.+||..+|.+|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            2334445688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.95  E-value=2.5e-27  Score=196.91  Aligned_cols=165  Identities=25%  Similarity=0.369  Sum_probs=122.2

Q ss_pred             Cccccc-chHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++..             ..++.+++.++.|||++||+||||+|+||+++.++.  ++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~--~~l~d~~~~~~~~~  158 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGV--VKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCc--EEEeccceeeeccC
Confidence            577765 88887753             123567889999999999999999999999987765  99999999865433


Q ss_pred             CC-CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HS-RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .. ......++..|+|||.+.+..++. ++|+|||||++|+|++|+.||......  ....................++.
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~~-~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYNF-KSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEKCDYPPLPADHYSE  235 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCCc-hhcHHHHHHHHHHHHHCCCCcccCCcc--HHHHHhhhhcCCCCCCChhhcCH
Confidence            22 122346888999999998777654 499999999999999999999654321  12222222221111111125778


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.++|.+||..+|++|||+.++++
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=1.5e-27  Score=222.86  Aligned_cols=164  Identities=23%  Similarity=0.313  Sum_probs=120.7

Q ss_pred             Cccccc-chHHHHHHh--------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccC
Q 024572            1 MQLGVS-SLSEFVMLE--------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFG   59 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg   59 (265)
                      ||++.+ +|.+++...                    .++.+++.++.|||++||+||||||+||+++.++.  +||+|||
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~--vKLiDFG  158 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE--VVILDWG  158 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCC--EEEEecC
Confidence            677765 888887531                    23467889999999999999999999999987776  9999999


Q ss_pred             CcccCCCC-------------------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh
Q 024572           60 YSKSSLLH-------------------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP  120 (265)
Q Consensus        60 ~a~~~~~~-------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~  120 (265)
                      +++.....                   ......+||+.|+|||++.+..++ .++|||||||++|+|++|+.||......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S-~kSDIWSLGVILyELLTG~~PF~~~~~~  237 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPAS-ESTDIYALGVILYQMLTLSFPYRRKKGR  237 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCC-cHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence            98754110                   011124689999999999887765 5599999999999999999999774432


Q ss_pred             HHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          121 KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .....   ..............+++.+.+++.+||..||++|++..+.+.
T Consensus       238 ki~~~---~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        238 KISYR---DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhh---hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            21111   111111112223467899999999999999999987655443

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=3.4e-27  Score=195.26  Aligned_cols=160  Identities=20%  Similarity=0.248  Sum_probs=118.4

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCC-----cEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAP-----RLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~-----~vkl~Dfg~a~~~   64 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++..+..     .+||+|||++...
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            566655 8888887644          25688999999999999999999999999876521     4999999998754


Q ss_pred             CCCCCCCCCcCCCCCcccccccCC-cCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRR-EYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      ..   .....++..|+|||.+.+. ...+.++|+|||||++|+|++ |..||...... .......    .....+.  .
T Consensus       159 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~----~~~~~~~--~  228 (259)
T cd05037         159 LS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQ----DQHRLPM--P  228 (259)
T ss_pred             cc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHh----cCCCCCC--C
Confidence            32   2234567789999998876 233456999999999999999 57777665422 1111111    1111222  1


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ....+.++|.+||..+|.+|||+.++++
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         229 DCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             CchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            2378999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.95  E-value=2.7e-27  Score=197.77  Aligned_cols=164  Identities=21%  Similarity=0.348  Sum_probs=124.9

Q ss_pred             Ccccc-cchHHHHHHhc------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLGV-SSLSEFVMLEG------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||++. ++|.+++....                  .+.+++.+|.|||++||+||||||+||+++.++.  ++|+|||++
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~--~~l~~~~~~  164 (275)
T cd05046          87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQRE--VKVSLLSLS  164 (275)
T ss_pred             EEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCc--EEEcccccc
Confidence            67776 48999887544                  2567899999999999999999999999988765  999999998


Q ss_pred             ccCCCCC--CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           62 KSSLLHS--RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        62 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                      +......  ......++..|+|||.+.+.... .++||||||+++|++++ |..||.......    .+..........+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~~l~~~~~~p~~~~~~~~----~~~~~~~~~~~~~  239 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFS-TKSDVWSFGVLMWEVFTQGELPFYGLSDEE----VLNRLQAGKLELP  239 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCccccchHH----HHHHHHcCCcCCC
Confidence            6432211  11223456779999998776654 55999999999999998 788987654322    2222332333344


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ....++..+.+++.+||..+|.+|||+.++++.
T Consensus       240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            444688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.95  E-value=4.7e-27  Score=199.39  Aligned_cols=163  Identities=20%  Similarity=0.331  Sum_probs=122.1

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~--~kL~Dfg~~~~~~~~~~  164 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEK  164 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc--eEEccccccccccCccc
Confidence            34554 47888876532          3567889999999999999999999999987665  99999999875432221


Q ss_pred             C---CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 P---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .   ....++..|+|||.+.+..++ .++|||||||++|++++ |..||.+... ......+    ......+....++.
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DiwslG~~l~el~t~g~~p~~~~~~-~~~~~~~----~~~~~~~~~~~~~~  238 (303)
T cd05110         165 EYNADGGKMPIKWMALECIHYRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPT-REIPDLL----EKGERLPQPPICTI  238 (303)
T ss_pred             ccccCCCccccccCCHHHhccCCCC-hHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH----HCCCCCCCCCCCCH
Confidence            1   122356789999998876664 45999999999999997 8999976532 2222222    22233344446788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.+++.+||..+|++||++.++++.
T Consensus       239 ~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         239 DVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=1.7e-27  Score=185.55  Aligned_cols=160  Identities=22%  Similarity=0.296  Sum_probs=125.8

Q ss_pred             ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchH
Q 024572           16 GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLA   95 (265)
Q Consensus        16 ~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~   95 (265)
                      ..+.+++.+|.||||+||+|||+||.|++|+.... .++|+|+|+|.........+..+.+..|.-||++...+....+-
T Consensus       136 yY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~r-kLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSL  214 (338)
T KOG0668|consen  136 YYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSL  214 (338)
T ss_pred             HHHHHHHHHHhHHHhcCcccccCCcceeeechhhc-eeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccH
Confidence            34667899999999999999999999999987654 69999999998777777777778899999999998877666768


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHhhh---------c---------------------ccCCCCC-CC
Q 024572           96 DVWSCGVTLYVMLVGAYPFEDQE-DPKNFRKTISRIMAV---------Q---------------------YKIPDYV-HI  143 (265)
Q Consensus        96 DiwslG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~---------~---------------------~~~~~~~-~~  143 (265)
                      |+|||||++..|+..+.||.... ..+++.++.+-+...         .                     +..+... -.
T Consensus       215 D~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~  294 (338)
T KOG0668|consen  215 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLV  294 (338)
T ss_pred             HHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccC
Confidence            99999999999999998876544 444444433221100         0                     0001111 24


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++++.+|+.++|.+|-.+|+|+.|++.||||..
T Consensus       295 ~peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  295 SPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             ChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence            689999999999999999999999999999953

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.95  E-value=3.1e-27  Score=196.70  Aligned_cols=162  Identities=19%  Similarity=0.316  Sum_probs=122.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++........
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~~~  162 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE--CKVSDFGLSRVLEDDPE  162 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCc--EEECCCccceecccccc
Confidence            676665 8888876432          3566788999999999999999999999987765  99999999865432221


Q ss_pred             CC----CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 PK----STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ..    ....+..|+|||.+.+..++ .++|+|||||++|++++ |+.||.........    ..+.. ....+....++
T Consensus       163 ~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~----~~i~~-~~~~~~~~~~~  236 (268)
T cd05063         163 GTYTTSGGKIPIRWTAPEAIAYRKFT-SASDVWSFGIVMWEVMSFGERPYWDMSNHEVM----KAIND-GFRLPAPMDCP  236 (268)
T ss_pred             cceeccCCCcCceecCHHHhhcCCcC-hHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH----HHHhc-CCCCCCCCCCC
Confidence            11    11234579999999877665 45999999999999997 99999765543222    22221 23444455688


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.+++.+||..+|++||++.++++
T Consensus       237 ~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         237 SAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.95  E-value=4e-27  Score=196.18  Aligned_cols=164  Identities=25%  Similarity=0.325  Sum_probs=123.7

Q ss_pred             Cccccc-chHHHHHH-------------hccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGVS-SLSEFVML-------------EGSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~-sL~~~~~~-------------~~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.+ +|.+++..             ..++.+++.++.|||+ +||+||||+|+||+++.++.  +||+|||.+....
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~--~~l~dfg~~~~~~  165 (269)
T cd08528          88 MDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK--VTITDFGLAKQKQ  165 (269)
T ss_pred             EecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCc--EEEecccceeecc
Confidence            577654 78777632             1235578899999996 78999999999999988765  9999999987654


Q ss_pred             CCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           66 LHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        66 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .........++..|+|||.+.+..+. .++|+||||+++|+|++|+.||........    ...+............++.
T Consensus       166 ~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  240 (269)
T cd08528         166 PESKLTSVVGTILYSCPEIVKNEPYG-EKADVWAFGCILYQMCTLQPPFYSTNMLSL----ATKIVEAVYEPLPEGMYSE  240 (269)
T ss_pred             cccccccccCcccCcChhhhcCCCCc-hHHHHHHHHHHHHHHHhCCCcccccCHHHH----HHHHhhccCCcCCcccCCH
Confidence            44333445688899999999876664 559999999999999999999976543222    2222222222222225788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.++|.+||..||++||++.++..+
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            99999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.95  E-value=3.7e-27  Score=195.50  Aligned_cols=162  Identities=20%  Similarity=0.333  Sum_probs=122.7

Q ss_pred             Ccccc-cchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++...           .++.+++.++.|||++|++||||||+||+++.++.  ++|+|||++.......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~  156 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLC--CKIADFGLARLIEDNE  156 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCC--EEEccCcceeecCCCC
Confidence            56664 4888877542           23667889999999999999999999999988775  9999999986543221


Q ss_pred             C--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 R--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .  .....++..|+|||.+.+..+. .++|+||||+++|++++ |+.||.+......... +    ......+.+..++.
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~----~~~~~~~~~~~~~~  230 (260)
T cd05067         157 YTAREGAKFPIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-L----ERGYRMPRPDNCPE  230 (260)
T ss_pred             cccccCCcccccccCHHHhccCCcC-cccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH-H----HcCCCCCCCCCCCH
Confidence            1  1123356789999998876664 45999999999999999 9999987654332221 1    12223344456788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.++|.+||..+|++|||+++++.
T Consensus       231 ~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         231 ELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.1e-27  Score=195.93  Aligned_cols=162  Identities=20%  Similarity=0.300  Sum_probs=122.7

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+|+||||+||+++.++.  +||+|||+++......
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~--~~l~d~g~~~~~~~~~  157 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLV--CKIADFGLARLIEDDE  157 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCC--EEECccccceeccchh
Confidence            566654 888888653           24667889999999999999999999999988765  9999999987543221


Q ss_pred             CC--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RP--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ..  .....+..|+|||.+.+..+. .++|+||+|+++|++++ |+.||.+..........    . .....+.+...+.
T Consensus       158 ~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~----~-~~~~~~~~~~~~~  231 (261)
T cd05034         158 YTAREGAKFPIKWTAPEAANYGRFT-IKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV----E-RGYRMPRPPNCPE  231 (261)
T ss_pred             hhhhhccCCCccccCHHHhccCCcC-chhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----H-cCCCCCCCCCCCH
Confidence            11  122345689999999876654 45999999999999998 99999765543322222    1 1223344446788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+||++.++++
T Consensus       232 ~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         232 ELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHH
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.95  E-value=5.2e-27  Score=195.67  Aligned_cols=163  Identities=22%  Similarity=0.366  Sum_probs=123.1

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~--~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDC--VKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCC--eEEccCceeeecccccc
Confidence            567654 8988886532          3567889999999999999999999999987765  99999999875433321


Q ss_pred             C--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 P--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .  ....++..|+|||.+....+. .++|+||||+++|++++ |..||...........    +. .....+.+..++..
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~----~~-~~~~~~~~~~~~~~  236 (270)
T cd05056         163 YKASKGKLPIKWMAPESINFRRFT-SASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR----IE-NGERLPMPPNCPPT  236 (270)
T ss_pred             eecCCCCccccccChhhhccCCCC-chhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HH-cCCcCCCCCCCCHH
Confidence            1  112244679999998776665 45999999999999986 9999977654332222    11 12223444568899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..+|.+|||+.+++..
T Consensus       237 ~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         237 LYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=4.9e-27  Score=196.55  Aligned_cols=161  Identities=20%  Similarity=0.297  Sum_probs=118.5

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-----CcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-----PRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-----~~vkl~Dfg~a~~~   64 (265)
                      |||+.+ +|..++....          ++.+++.++.|||++||+||||||+|||++..+.     ..+|++|||++...
T Consensus        95 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076          95 EEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccc
Confidence            677776 7777775421          3677899999999999999999999999975432     24899999987533


Q ss_pred             CCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHH-hCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ...   ....++..|+|||.+.+....+.++|+|||||++|+++ +|+.||........ ....    ......+.  ..
T Consensus       175 ~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-~~~~----~~~~~~~~--~~  244 (274)
T cd05076         175 LSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-ERFY----EKKHRLPE--PS  244 (274)
T ss_pred             ccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-HHHH----HhccCCCC--CC
Confidence            221   23357788999999876444456699999999999985 68999976543221 1111    11122222  35


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++.+.++|.+||..+|.+|||+.+++++
T Consensus       245 ~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         245 CKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            6789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.95  E-value=5.1e-27  Score=195.44  Aligned_cols=164  Identities=20%  Similarity=0.311  Sum_probs=120.9

Q ss_pred             Ccccc-cchHHHHHHh----------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCC---CCcEEEeccCC
Q 024572            1 MQLGV-SSLSEFVMLE----------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP---APRLKICDFGY   60 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~---~~~vkl~Dfg~   60 (265)
                      ||+.. ++|.+++...                .++.+++.++.|||+++++|+||||+||+++.+.   ...++|+|||+
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            56654 4888887642                1355778889999999999999999999998765   12499999999


Q ss_pred             cccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           61 SKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        61 a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ++.......   .....++..|+|||.+.+..+. .++|||||||++|+|++ |+.||........    ...+. ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~ellt~g~~p~~~~~~~~~----~~~~~-~~~~  231 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFT-TQSDVWSFGVLMWEILTLGQQPYPALNNQEV----LQHVT-AGGR  231 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcc-cchhHHHHHHHHHHHHHcCCCCCcccCHHHH----HHHHh-cCCc
Confidence            864432211   1223456789999999877764 55999999999999998 9999976543222    11111 1122


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ...+..++..+.++|.+||..+|.+||++.++++
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         232 LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            2333467899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.95  E-value=5.7e-27  Score=194.44  Aligned_cols=162  Identities=23%  Similarity=0.365  Sum_probs=122.5

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....           ++.+++.++.|||++|++||||||+||+++..+.  +||+|||.+.......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~  156 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV--CKIADFGLARVIEDNE  156 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc--EEECCCcceeeccCCC
Confidence            67775 48988886532           3567899999999999999999999999987765  9999999986543221


Q ss_pred             C--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 R--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .  .....++..|+|||.+.+..++ .++|+|||||++|++++ |+.||........... +    ......+.....+.
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~----~~~~~~~~~~~~~~  230 (260)
T cd05073         157 YTAREGAKFPIKWTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-L----ERGYRMPRPENCPE  230 (260)
T ss_pred             cccccCCcccccccCHhHhccCCcC-ccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-H----hCCCCCCCcccCCH
Confidence            1  1122355679999999876654 45999999999999998 9999987544322221 1    12233344456789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|++||++.++++
T Consensus       231 ~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         231 ELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHH
Confidence            9999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.95  E-value=6e-27  Score=197.12  Aligned_cols=146  Identities=21%  Similarity=0.305  Sum_probs=110.9

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++|++||||||+||+++.++.  ++|+|||+++.......   ......+..|+|||.+.+..+. .
T Consensus       135 ~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~  211 (288)
T cd05050         135 IAKQVAAGMAYLSERKFVHRDLATRNCLVGENMV--VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYT-T  211 (288)
T ss_pred             HHHHHHHHHHHHHhCCeecccccHhheEecCCCc--eEECccccceecccCccccccCCCccChhhcCHHHHhcCCCC-c
Confidence            5677889999999999999999999999987765  99999999864432211   1122345679999998877765 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++|+|||||++|+|++ |..||.+.....    ....+.... ..+.+..++..+.+||.+||..+|.+|||+.++++
T Consensus       212 ~~Dv~slG~il~el~~~~~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         212 ESDVWAYGVVLWEIFSYGMQPYYGMAHEE----VIYYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            5999999999999997 888987654332    222222221 12223357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=4.3e-27  Score=209.87  Aligned_cols=158  Identities=21%  Similarity=0.230  Sum_probs=112.9

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC--CcCCCCCcccccccCCcCC---
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS--TVGTPAYIAPEVLSRREYD---   91 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~---   91 (265)
                      ++.+++.++.|||+++|+||||||+|||++.++.  +||+|||+++..........  ..+++.|+|||.+......   
T Consensus       314 i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~--~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~  391 (507)
T PLN03224        314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ--VKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRA  391 (507)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCchHhEEECCCCc--EEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCcc
Confidence            4567888999999999999999999999987765  99999999864433222222  2357899999998542211   


Q ss_pred             ------------------CchHhHHHHHHHHHHHHhCCC-CCCCCCChHH-H------HHHHHHHhhhcccCCCCCCCCH
Q 024572           92 ------------------GKLADVWSCGVTLYVMLVGAY-PFEDQEDPKN-F------RKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        92 ------------------~~~~DiwslG~~l~~ll~g~~-pf~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                                        ..+.|+||+||++|+|++|.. ||........ +      ...........+.++.+...++
T Consensus       392 ~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~  471 (507)
T PLN03224        392 PAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKE  471 (507)
T ss_pred             chhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccCh
Confidence                              123699999999999999875 6653211110 0      0111112223334445556789


Q ss_pred             HHHHHHHHhcccCC---CCCCCHHHHhcCcccCC
Q 024572          146 DCRNLLSRIFVANP---SRRITIKEIKSHPWFLK  176 (265)
Q Consensus       146 ~~~~li~~~L~~dP---~~R~s~~ell~h~~f~~  176 (265)
                      ..++|+.+||..+|   .+|+|+.++|+||||..
T Consensus       472 ~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        472 AGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             HHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            99999999999866   68999999999999964

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.95  E-value=6.1e-27  Score=190.98  Aligned_cols=168  Identities=33%  Similarity=0.523  Sum_probs=129.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+.+. +|.+++....         ++.+++.++.+||+.+|+|+||+|.||+++.++.  ++|+|||.+.........
T Consensus        66 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~--~~l~d~~~~~~~~~~~~~  143 (244)
T smart00220       66 MEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGH--VKLADFGLARQLDPGGLL  143 (244)
T ss_pred             EeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCc--EEEccccceeeecccccc
Confidence            466666 8888775533         4666888999999999999999999999988765  999999998765444344


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCC-CCCHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV-HISQDCRN  149 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  149 (265)
                      ....++..|++||.+.+..++. ++|+||+|++++++++|..||............   ............ .++..+.+
T Consensus       144 ~~~~~~~~~~~pE~~~~~~~~~-~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  219 (244)
T smart00220      144 TTFVGTPEYMAPEVLLGKGYGK-AVDVWSLGVILYELLTGKPPFPGDDQLLELFKK---IGKPKPPFPPPEWKISPEAKD  219 (244)
T ss_pred             ccccCCcCCCCHHHHccCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH---HhccCCCCccccccCCHHHHH
Confidence            4556888999999998766654 699999999999999999999774333322222   222222222111 17889999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCccc
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ++.+||..+|++||++.++++||||
T Consensus       220 ~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      220 LIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHHHccCCchhccCHHHHhhCCCC
Confidence            9999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=6.4e-27  Score=192.89  Aligned_cols=162  Identities=25%  Similarity=0.344  Sum_probs=119.8

Q ss_pred             Cccc-ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+. +++|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        71 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~--~~l~d~g~~~~~~~~~~  148 (251)
T cd05041          71 MELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNV--LKISDFGMSREEEGGIY  148 (251)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCc--EEEeeccccccccCCcc
Confidence            5666 458888875432          2456778899999999999999999999987765  99999999874432111


Q ss_pred             C---CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 P---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .   .....+..|+|||.+.+..+. .++|+||||+++|+|++ |..||........ ...+    ......+.+..++.
T Consensus       149 ~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-~~~~----~~~~~~~~~~~~~~  222 (251)
T cd05041         149 TVSDGLKQIPIKWTAPEALNYGRYT-SESDVWSYGILLWETFSLGDTPYPGMSNQQT-RERI----ESGYRMPAPQLCPE  222 (251)
T ss_pred             eeccccCcceeccCChHhhccCCCC-cchhHHHHHHHHHHHHhccCCCCccCCHHHH-HHHH----hcCCCCCCCccCCH
Confidence            1   112235579999998876664 55999999999999999 8888876553222 2211    11223333446789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+|||+.++++
T Consensus       223 ~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         223 EIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHH
Confidence            9999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=5.4e-27  Score=196.94  Aligned_cols=167  Identities=20%  Similarity=0.252  Sum_probs=120.0

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+.. ++|.+++....          .+.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~--~~l~dfg~~~~~~~~~~  163 (284)
T cd05081          86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENR--VKIGDFGLTKVLPQDKE  163 (284)
T ss_pred             EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCe--EEECCCcccccccCCCc
Confidence            56664 58999886532          2567889999999999999999999999987765  99999999875433221


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH-----------HHHHHHHHHhhhc
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK-----------NFRKTISRIMAVQ  134 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~-----------~~~~~~~~~~~~~  134 (265)
                      .    ....++..|+|||.+.+..+. .++|+|||||++|+|++|..++.......           .....+.......
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05081         164 YYKVREPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN  242 (284)
T ss_pred             ceeecCCCCCceEeeCHHHhccCCcC-hHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence            1    111234569999999876664 55999999999999999877654322100           0000111112222


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ...+....++..+.+||.+||..+|++|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            333444568899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=2.6e-27  Score=198.55  Aligned_cols=167  Identities=22%  Similarity=0.279  Sum_probs=124.2

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||.+........
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~  164 (284)
T cd05038          87 MEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL--VKISDFGLAKVLPEDKD  164 (284)
T ss_pred             EecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC--EEEcccccccccccCCc
Confidence            67775 49999987644          4677899999999999999999999999988765  99999999875542211


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH----------HHHHHHHHHhhhcc
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK----------NFRKTISRIMAVQY  135 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~----------~~~~~~~~~~~~~~  135 (265)
                      .    ....++..|+|||.+.+..+. .++|+||||+++|+|++|+.||.......          .....+........
T Consensus       165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd05038         165 YYYVKEPGESPIFWYAPECLRTSKFS-SASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE  243 (284)
T ss_pred             ceeccCCCCCcccccCcHHHccCCCC-cccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC
Confidence            1    112345679999998776664 44899999999999999999986543211          00111222222233


Q ss_pred             cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          136 KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       136 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+....++..+.+++.+||..+|.+|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         244 RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            34444567889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.95  E-value=5e-27  Score=196.78  Aligned_cols=146  Identities=17%  Similarity=0.303  Sum_probs=112.4

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||+++|+||||||+||+++.++.  +||+|||+++.......   .....++..|+|||.+.+..++ .
T Consensus       122 i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~--~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~-~  198 (280)
T cd05043         122 MAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQ--VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYS-S  198 (280)
T ss_pred             HHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCc--EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCC-c
Confidence            3557889999999999999999999999987765  99999999875432211   1223456789999999876665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++|||||||++|++++ |+.||...... .+...+    ......+....+++.+.+++.+||..+|++|||+.++++
T Consensus       199 ~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         199 ASDVWSFGVLLWELMTLGQTPYVEIDPF-EMAAYL----KDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             hhhHHHhHHHHHHHhcCCCCCcCcCCHH-HHHHHH----HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            5999999999999998 99999765432 222211    122333444467899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=1e-27  Score=199.05  Aligned_cols=162  Identities=28%  Similarity=0.448  Sum_probs=119.1

Q ss_pred             Ccccc-cchHHHHHHh--c---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE--G---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~--~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++..+  .         ++.+++.++.|||+++|+|++|+++|||++.++.  +||+|||++.......
T Consensus        80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~--~Kl~~f~~~~~~~~~~  157 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQ--VKLSDFGLSRPISEKS  157 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTE--EEEESTTTGEETTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc
Confidence            57776 4899998887  1         2677899999999999999999999999998775  9999999987552211


Q ss_pred             ---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 ---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                         ..........|+|||.+.+..+ +.++||||||+++|++++ |+.||..... ..   ....+. .....+....++
T Consensus       158 ~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~---~~~~~~-~~~~~~~~~~~~  231 (259)
T PF07714_consen  158 KYKNDSSQQLPLRYLAPEVLKDGEY-TKKSDVYSFGMLLYEILTLGKFPFSDYDN-EE---IIEKLK-QGQRLPIPDNCP  231 (259)
T ss_dssp             SEEESTTSESGGGGS-HHHHHHSEE-SHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HH---HHHHHH-TTEETTSBTTSB
T ss_pred             ccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc-cc---cccccc-ccccceeccchh
Confidence               1122346678999999988776 456999999999999999 7899877633 22   222222 222334445689


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.++|.+||..+|.+|||+.++++
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            99999999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.94  E-value=5e-27  Score=195.65  Aligned_cols=162  Identities=20%  Similarity=0.340  Sum_probs=121.4

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++|++||||||+||+++.++.  +||+|||+++.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~--~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLV--CKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCc--EEECCCccccccccCcc
Confidence            677765 8888876532          2467789999999999999999999999987665  99999998864432221


Q ss_pred             CCCC---c---CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           70 PKST---V---GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        70 ~~~~---~---~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      ....   .   .+..|+|||.+.+..++ .++|||||||++|++++ |..||........    ...+ ......+.+..
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~-~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~----~~~i-~~~~~~~~~~~  235 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDV----INAI-EQDYRLPPPMD  235 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCccc-chhhhhhhHHHHHHHhcCCCCCCCCCCHHHH----HHHH-HcCCcCCCccc
Confidence            1111   1   23479999999877765 45999999999999886 9999977543322    2222 12234444557


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++..+.+++.+||..+|.+||++.+++.
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         236 CPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            8899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.94  E-value=7.1e-27  Score=205.24  Aligned_cols=146  Identities=24%  Similarity=0.403  Sum_probs=113.1

Q ss_pred             cchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchH
Q 024572           19 KMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLA   95 (265)
Q Consensus        19 ~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~   95 (265)
                      .+++.++.|||+++|+||||||+|||++.++.  +||+|||+++......   ......++..|+|||.+.+..+. .++
T Consensus       246 ~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~--~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~  322 (401)
T cd05107         246 YQVANGMEFLASKNCVHRDLAARNVLICEGKL--VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYT-TLS  322 (401)
T ss_pred             HHHHHHHHHHhcCCcCcccCCcceEEEeCCCE--EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCC-cHh
Confidence            47889999999999999999999999987665  9999999987432211   11233567889999999876665 459


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           96 DVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        96 DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      |+|||||++|+|++ |..||............+.    .....+.+..++..+.+|+.+||..+|.+||++.++++.
T Consensus       323 DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         323 DVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999998 8899976554333222221    222333444678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=9.2e-27  Score=195.13  Aligned_cols=162  Identities=23%  Similarity=0.315  Sum_probs=121.7

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~--~kL~dfg~~~~~~~~~~  164 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLDVDEK  164 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCe--EEECCCcccccccCccc
Confidence            46654 48888876532          3577899999999999999999999999987765  99999999875543222


Q ss_pred             CCC---CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 PKS---TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ~~~---~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ...   ..++..|+|||.+....++ .++|+|||||++|++++ |+.||....... +...+   . .....+.+..++.
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~---~-~~~~~~~~~~~~~  238 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILHRIYT-HKSDVWSYGVTVWELMTFGAKPYEGIPAVE-IPDLL---E-KGERLPQPPICTI  238 (279)
T ss_pred             ceecCCCcccccccCHHHhhcCCcC-chhhHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHH---h-CCCCCCCCCCCCH
Confidence            111   1235679999998766665 45999999999999998 999997764322 22222   1 1223344445788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|..||++.++++
T Consensus       239 ~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         239 DVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHH
Confidence            9999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=3.6e-28  Score=208.23  Aligned_cols=167  Identities=26%  Similarity=0.418  Sum_probs=125.8

Q ss_pred             chHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCc
Q 024572            7 SLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV   74 (265)
Q Consensus         7 sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~   74 (265)
                      +|.+.+..-|            ..+|+.-+|.+|-..||+|.||||+|||++.+.. .+||||||.|...... ..+.+.
T Consensus       519 NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~-iLKLCDfGSA~~~~en-eitPYL  596 (752)
T KOG0670|consen  519 NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN-ILKLCDFGSASFASEN-EITPYL  596 (752)
T ss_pred             hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc-eeeeccCccccccccc-cccHHH
Confidence            5666665443            3778888899999999999999999999987654 5999999998755443 334455


Q ss_pred             CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHH--------HhhhcccC---------
Q 024572           75 GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISR--------IMAVQYKI---------  137 (265)
Q Consensus        75 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--------~~~~~~~~---------  137 (265)
                      .+..|+|||++.|.+|+.. .|+||+||+||+|.||+..|.+......+.-.+.-        +....+..         
T Consensus       597 VSRFYRaPEIiLG~~yd~~-iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf  675 (752)
T KOG0670|consen  597 VSRFYRAPEIILGLPYDYP-IDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNF  675 (752)
T ss_pred             HHHhccCcceeecCcccCC-ccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccce
Confidence            7789999999999999876 89999999999999999999998765544322210        00000000         


Q ss_pred             ---------------------C---------CCCCC-------CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          138 ---------------------P---------DYVHI-------SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       138 ---------------------~---------~~~~~-------~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                           |         ....+       -..+++||.+||..||++|.|+.++|.||||..
T Consensus       676 ~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  676 LYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             EEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                                 0         00001       145889999999999999999999999999964

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.94  E-value=1.4e-26  Score=191.26  Aligned_cols=162  Identities=22%  Similarity=0.341  Sum_probs=121.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++....           ++.+++.++.+||++|++||||||+||+++.++.  ++|+|||+++......
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~~  157 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV--VKISDFGLSRDLYDDD  157 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCe--EEEcccCCceeccccc
Confidence            566654 8888876533           3667889999999999999999999999988775  9999999987544332


Q ss_pred             CCC--CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 RPK--STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      ...  ...++..|+|||.+.+..+. .++|+||+|+++|+|++ |..||..........    .+... ...+....++.
T Consensus       158 ~~~~~~~~~~~~y~~Pe~~~~~~~~-~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~  231 (258)
T smart00219      158 YYKKKGGKLPIRWMAPESLKDGKFT-SKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE----YLKKG-YRLPKPENCPP  231 (258)
T ss_pred             ccccccCCCcccccChHHhccCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----HHhcC-CCCCCCCcCCH
Confidence            111  12366789999998665554 55999999999999998 788887644322222    22211 22333345789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+++.+||..+|.+|||+.++++
T Consensus       232 ~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      232 EIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHHh
Confidence            9999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.94  E-value=1.3e-26  Score=191.65  Aligned_cols=163  Identities=22%  Similarity=0.348  Sum_probs=120.1

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++|++||||||+||+++.++.  +||+|||.++.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~  155 (256)
T cd05112          78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQV--VKVSDFGMTRFVLDDQY  155 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCe--EEECCCcceeecccCcc
Confidence            566654 7888776432          3456788899999999999999999999987665  99999999864432211


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        .....++..|+|||.+.+..+. .++|+||||+++|+|++ |..||.......    ....+... .....+...+..
T Consensus       156 ~~~~~~~~~~~~~aPe~~~~~~~~-~~~Dv~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~  229 (256)
T cd05112         156 TSSTGTKFPVKWSSPEVFSFSKYS-SKSDVWSFGVLMWEVFSEGKTPYENRSNSE----VVETINAG-FRLYKPRLASQS  229 (256)
T ss_pred             cccCCCccchhhcCHhHhccCCcC-hHHHHHHHHHHHHHHHcCCCCCCCcCCHHH----HHHHHhCC-CCCCCCCCCCHH
Confidence              1122345689999999876665 45999999999999998 999997654322    22222111 122223346889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+|+.+||..+|++|||+.+++++
T Consensus       230 ~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         230 VYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHHHHHHHcccChhhCCCHHHHHHh
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.94  E-value=1.3e-26  Score=192.95  Aligned_cols=162  Identities=20%  Similarity=0.334  Sum_probs=122.5

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  ++|+|||+++.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~--~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCe--EEeCCCCcccccccccc
Confidence            677754 8988887542          2456788999999999999999999999987765  99999999875433221


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .    ....++..|+|||.+.+..++ .++|+|||||++|++++ |..||..........    .+.. ....+....++
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~~-~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~  235 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK----AIEE-GYRLPAPMDCP  235 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCccC-chhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH----HHhC-CCcCCCCCCCC
Confidence            1    111234679999999876665 45999999999999886 999997755432222    2221 22344445678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.+++.+||..+|.+||++.++++
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         236 AALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHHHHHHcccCchhCCCHHHHHH
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2.6e-27  Score=207.19  Aligned_cols=171  Identities=30%  Similarity=0.465  Sum_probs=128.7

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC----
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL----   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~----   66 (265)
                      |+|..+ .+..++.+.++         +..+.-++.+.|..|+|||||||+|||||.+|.  |||+|||+|..+.-    
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH--IKLTDFGLCTGfRWTHds  785 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDS  785 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc--eeeeeccccccceecccc
Confidence            555544 77777777665         333445688899999999999999999998887  99999999852210    


Q ss_pred             -----CC----------------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHH
Q 024572           67 -----HS----------------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVM  107 (265)
Q Consensus        67 -----~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l  107 (265)
                           ..                                  .....+||+.|+|||++...+|... +|+||.|+|||+|
T Consensus       786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~-cdwws~gvil~em  864 (1034)
T KOG0608|consen  786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL-CDWWSVGVILYEM  864 (1034)
T ss_pred             ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc-chhhHhhHHHHHH
Confidence                 00                                  0012369999999999998888644 9999999999999


Q ss_pred             HhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccCCC
Q 024572          108 LVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWFLKN  177 (265)
Q Consensus       108 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---s~~ell~h~~f~~~  177 (265)
                      +.|+.||..........+++.  ....+.++...+++.++.+||.++. .+++.|.   .+++|..||||+..
T Consensus       865 ~~g~~pf~~~tp~~tq~kv~n--w~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  865 LVGQPPFLADTPGETQYKVIN--WRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             hhCCCCccCCCCCcceeeeee--hhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCcccccc
Confidence            999999987665443333222  1233456666789999999999854 5688888   47789999999864

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2e-27  Score=189.67  Aligned_cols=159  Identities=25%  Similarity=0.356  Sum_probs=121.9

Q ss_pred             hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC--CCCcCCCCCcccccccCCcCCC
Q 024572           15 EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP--KSTVGTPAYIAPEVLSRREYDG   92 (265)
Q Consensus        15 ~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~   92 (265)
                      +.++.||+.+|.|||+.+|+||||||.|+|++++-.  +||||||+++........  +..+-|.+|+|||++.+...++
T Consensus       159 KVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCv--LKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs  236 (449)
T KOG0664|consen  159 KVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCI--LKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYT  236 (449)
T ss_pred             hhhHHHHHhhhHHHhhcchhhccCCCccEEeccCce--EEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhc
Confidence            345888999999999999999999999999998876  999999999854433222  2335788999999999977767


Q ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH-------------------hhhcccCCCC---------CCCC
Q 024572           93 KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI-------------------MAVQYKIPDY---------VHIS  144 (265)
Q Consensus        93 ~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~---------~~~~  144 (265)
                      .+.||||+||++.|++-++..|...+...++.-+..-+                   .+...+.|..         ....
T Consensus       237 ~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~  316 (449)
T KOG0664|consen  237 GAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKN  316 (449)
T ss_pred             CccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccc
Confidence            77999999999999999999998766555443322211                   1111222211         1233


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      .+...++.++|..||++|.+..+++.|++..
T Consensus       317 heav~~~~~~l~~d~dkris~~~A~~~~~~~  347 (449)
T KOG0664|consen  317 HEAVDLLQKLLHFDPDKRISVEEALQHRYLE  347 (449)
T ss_pred             hHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence            5677899999999999999999999999964

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-26  Score=188.82  Aligned_cols=158  Identities=31%  Similarity=0.491  Sum_probs=124.4

Q ss_pred             cchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCCCCCCcCCCCCcccccccCCcCCCchHhH
Q 024572           19 KMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKSTVGTPAYIAPEVLSRREYDGKLADV   97 (265)
Q Consensus        19 ~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di   97 (265)
                      ..|.-+|.|||++|||+||||.+|||++..+.  +||+|+|+++.... .....+++||+.|.|||++++..|. ..+|+
T Consensus       358 ~ei~lal~flh~rgiiyrdlkldnvlldaegh--ikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeyg-fsvdw  434 (593)
T KOG0695|consen  358 AEICLALNFLHERGIIYRDLKLDNVLLDAEGH--IKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYG-FSVDW  434 (593)
T ss_pred             HHHHHHHHHHhhcCeeeeeccccceEEccCCc--eeecccchhhcCCCCCcccccccCCCcccchhhhcccccC-ceehH
Confidence            34667899999999999999999999998886  99999999986443 4455678999999999999998874 55999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCC---ChHHHH-HHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCC------CHHH
Q 024572           98 WSCGVTLYVMLVGAYPFEDQE---DPKNFR-KTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRI------TIKE  167 (265)
Q Consensus        98 wslG~~l~~ll~g~~pf~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~------s~~e  167 (265)
                      |+||+++++|+.|+.||.--.   ...+.. -..+-+...+.++|.  .++-.+..+++..|.+||.+|.      .+.+
T Consensus       435 walgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~d  512 (593)
T KOG0695|consen  435 WALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSD  512 (593)
T ss_pred             HHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhh
Confidence            999999999999999996321   111111 223334455556665  5777888999999999999997      4789


Q ss_pred             HhcCcccCCCCChhh
Q 024572          168 IKSHPWFLKNLPREL  182 (265)
Q Consensus       168 ll~h~~f~~~~~~~~  182 (265)
                      +..|+||+ .+....
T Consensus       513 ik~h~ffr-~idwd~  526 (593)
T KOG0695|consen  513 IKSHAFFR-SIDWDL  526 (593)
T ss_pred             hhcchhhh-hCCHHH
Confidence            99999998 444443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.93  E-value=2.5e-26  Score=213.60  Aligned_cols=97  Identities=31%  Similarity=0.621  Sum_probs=76.2

Q ss_pred             CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-CCCCCHHHHHHHHH
Q 024572           75 GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQDCRNLLSR  153 (265)
Q Consensus        75 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  153 (265)
                      ||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+......+..+    ......++. ...++..+.+++.+
T Consensus       542 GT~~Y~APE~l~~~~~~-~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~i----l~~~~~~p~~~~~~~~~~~~~l~~  616 (669)
T cd05610         542 GTPDYLAPELLLGKPHG-PAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNI----LNRDIPWPEGEEKLSVNAQNAIEI  616 (669)
T ss_pred             eCccccCHHHcCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhcCCCCCcccccCCHHHHHHHHH
Confidence            58889999999987765 5599999999999999999999876543333322    222222222 22567889999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCC
Q 024572          154 IFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       154 ~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ||..||.+||++.++++||||..
T Consensus       617 lL~~dP~~R~ta~e~l~h~~~~~  639 (669)
T cd05610         617 LLTMDPTKRAGLKELKQHPLFHG  639 (669)
T ss_pred             HcccChhHCcCHHHHHhCHhhcC
Confidence            99999999999999999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=5e-26  Score=189.87  Aligned_cols=147  Identities=20%  Similarity=0.333  Sum_probs=110.8

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......   .....++..|++||.+.+..++ .
T Consensus       118 ~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~  194 (273)
T cd05074         118 FMIDIASGMEYLSSKNFIHRDLAARNCMLNENMT--VCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYT-T  194 (273)
T ss_pred             HHHHHHHHHHHHHhCCEeecccchhhEEEcCCCC--EEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccc-h
Confidence            4667889999999999999999999999987665  99999999875432221   1222355789999998877665 4


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++|||||||++|+|++ |+.||......... .   .+... .........+..+.+++.+||..+|++|||+.+++++
T Consensus       195 ~sDi~slG~il~el~~~g~~p~~~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         195 HSDVWAFGVTMWEIMTRGQTPYAGVENSEIY-N---YLIKG-NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             hhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH-H---HHHcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5999999999999999 88998765432221 1   11111 1122223578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=8.6e-27  Score=203.27  Aligned_cols=163  Identities=24%  Similarity=0.356  Sum_probs=132.0

Q ss_pred             Cccccc-chHHHHHHhcc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||||.+ +|.+++...+-          +.+++.|+.|||++++|||||-..|+|+..++.  +||+|||+++.......
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~--vKISDFGLs~~~~~~~~  317 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGV--VKISDFGLSRAGSQYVM  317 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCe--EEeCccccccCCcceee
Confidence            899988 99999998762          444688899999999999999999999988775  89999999875432222


Q ss_pred             CC-CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           70 PK-STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        70 ~~-~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .. ..--...|+|||.+....++. ++|||||||++||+++ |..||.+....    .....+....++.+.+...+..+
T Consensus       318 ~~~~~klPirWLAPEtl~~~~~s~-kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~kI~~~~~r~~~~~~~p~~~  392 (474)
T KOG0194|consen  318 KKFLKKLPIRWLAPETLNTGIFSF-KTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAKIVKNGYRMPIPSKTPKEL  392 (474)
T ss_pred             ccccccCcceecChhhhccCcccc-ccchhheeeeEEeeeccCCCCCCCCCHH----HHHHHHHhcCccCCCCCCCHHHH
Confidence            22 112457899999999887654 4999999999999999 78899887653    33444445566677777889999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..++.+||..+|+.|||+.++.+
T Consensus       393 ~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  393 AKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHHHhccCChhhccCHHHHHH
Confidence            99999999999999999999865

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=3.6e-26  Score=206.11  Aligned_cols=170  Identities=26%  Similarity=0.363  Sum_probs=134.1

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-C
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-H   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~   67 (265)
                      ||||++ |.-|++...           .++..++.++.|||.+.++|||||-.|||++.++.  |||+|||.+..... .
T Consensus       100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~--VKLvDFGvSaQldsT~  177 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDSTV  177 (953)
T ss_pred             eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc--EEEeeeeeeeeeeccc
Confidence            899998 888877533           23555678899999999999999999999998886  99999999865443 3


Q ss_pred             CCCCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           68 SRPKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      ....+.+||+.|||||++..     ..|+.. +|+||||++..+|.-|.+|+......   +.++.....+......+..
T Consensus       178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R-~D~WsLGITaIEladG~PPl~DmHPm---raLF~IpRNPPPkLkrp~k  253 (953)
T KOG0587|consen  178 GRRNTFIGTPYWMAPEVIACDESPDATYDYR-SDLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPRNPPPKLKRPKK  253 (953)
T ss_pred             ccccCcCCCcccccceeeecccCCCCCcccc-cchhhccceeehhcCCCCCccCcchh---hhhccCCCCCCccccchhh
Confidence            44566789999999999864     234444 89999999999999999999775442   2222222223333334557


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++.++.+||..||.+|..+||+..++++|||.+.
T Consensus       254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  254 WSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            8899999999999999999999999999999973

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=3.4e-26  Score=206.37  Aligned_cols=145  Identities=26%  Similarity=0.357  Sum_probs=120.8

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC---CcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS---TVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.||+.++.||-++.+|||||-..|+||..+..  |||+|||+++........+.   ..-..+|||||.+...++++.
T Consensus       608 iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~--VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTte  685 (774)
T KOG1026|consen  608 IATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV--VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTE  685 (774)
T ss_pred             HHHHHHHHHHHHHhCcccccchhhhhceeccceE--EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccch
Confidence            4678999999999999999999999999998876  99999999986544433322   234568999999999999766


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                       +||||+||+|||+++ |+.||.+..+.+.+    ..+..... ++.+..+|.++.+||..||..+|.+||++.+|-
T Consensus       686 -SDVWs~GVvLWEIFsyG~QPy~glSn~EVI----e~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  686 -SDVWSFGVVLWEIFSYGKQPYYGLSNQEVI----ECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             -hhhhhhhhhhhhhhccccCcccccchHHHH----HHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence             999999999999998 99999998775443    33333444 666778999999999999999999999999984

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=9e-26  Score=210.17  Aligned_cols=158  Identities=22%  Similarity=0.323  Sum_probs=125.4

Q ss_pred             ccchHHHHHHh------c----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            5 VSSLSEFVMLE------G----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         5 ~~sL~~~~~~~------~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      +++|..|++..      .          +..+++.+..||+++++|||||...|+|++....  |||+|||+|+......
T Consensus       779 gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~--VKIaDFGlArDiy~~~  856 (1025)
T KOG1095|consen  779 GGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRV--VKIADFGLARDIYDKD  856 (1025)
T ss_pred             cCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCc--EEEcccchhHhhhhch
Confidence            34788888865      1          2455788999999999999999999999998865  9999999998433222


Q ss_pred             CCCC---CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 RPKS---TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 ~~~~---~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ....   ..-...|||||.+....++++ +|||||||++||++| |..||.+....+.+..    +.... +++.+..|+
T Consensus       857 yyr~~~~a~lPvkWm~PEsl~d~iFtsk-SDvWsFGVllWEifslG~~PY~~~~n~~v~~~----~~~gg-RL~~P~~CP  930 (1025)
T KOG1095|consen  857 YYRKHGEAMLPVKWMPPESLKDGIFTSK-SDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD----VLEGG-RLDPPSYCP  930 (1025)
T ss_pred             heeccCccccceecCCHHHHhhcccccc-cchhhhHHHHHHHHhCCCCCCCCcchHHHHHH----HHhCC-ccCCCCCCC
Confidence            2111   123468999999998888666 999999999999999 8999988766443322    22222 667777899


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.++|..||..+|++||++..|++
T Consensus       931 ~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  931 EKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             hHHHHHHHHHccCChhhCccHHHHHh
Confidence            99999999999999999999999987

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.93  E-value=7e-26  Score=197.93  Aligned_cols=162  Identities=24%  Similarity=0.396  Sum_probs=132.2

Q ss_pred             Cccccc-chHHHHHHhcc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |||+.. -|..|+..+.-          ..||..++.||||+.+|||||-..|||+.+...  |||+|||+++.......
T Consensus       469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~C--VKLaDFGLSR~~ed~~y  546 (974)
T KOG4257|consen  469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQC--VKLADFGLSRYLEDDAY  546 (974)
T ss_pred             EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcce--eeecccchhhhccccch
Confidence            788877 89999887753          567889999999999999999999999988776  99999999987665554


Q ss_pred             CCCCcC--CCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PKSTVG--TPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~--~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .+...|  ...|||||.+.-..+++ ++|||-||+++||++. |..||.+-...+.+..     .....+.|.+..|++.
T Consensus       547 YkaS~~kLPIKWmaPESINfRrFTt-ASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~-----iEnGeRlP~P~nCPp~  620 (974)
T KOG4257|consen  547 YKASRGKLPIKWMAPESINFRRFTT-ASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH-----IENGERLPCPPNCPPA  620 (974)
T ss_pred             hhccccccceeecCccccchhcccc-hhhHHHHHHHHHHHHHhcCCccccccccceEEE-----ecCCCCCCCCCCCChH
Confidence            444333  45799999998888754 5999999999999987 9999998765443221     2334567778899999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +..|+.+||.++|.+||.+.++..
T Consensus       621 LYslmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  621 LYSLMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             HHHHHHHHhccCcccCCcHHHHHH
Confidence            999999999999999999887643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=3e-26  Score=208.51  Aligned_cols=175  Identities=31%  Similarity=0.457  Sum_probs=138.6

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      ||||...|+.+++..+         ..+|++.++.|+|+.||.||||||+|+++..++.  +||+|||.+.......   
T Consensus       400 mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~--lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  400 MEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGI--LKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             hhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCc--eEEeecCcceeeccCcchh
Confidence            8999999999999863         3888999999999999999999999999998876  9999999986443322   


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHH---HhhhcccCCCCCCC
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISR---IMAVQYKIPDYVHI  143 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  143 (265)
                        .....+|+..|+|||++.+..|+....||||.|++++.|.+|+.||......++.......   .............+
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  557 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL  557 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence              2234579999999999999999999999999999999999999999775543332100000   00000011122347


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +...+.+|.+||+.+|.+|.|+++|++.+||+..
T Consensus       558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  558 PRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             hhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            7889999999999999999999999999999753

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.2e-25  Score=188.29  Aligned_cols=178  Identities=24%  Similarity=0.365  Sum_probs=135.2

Q ss_pred             CcccccchHHHHH----------HhccccchHHHHHhhhh--cCceecCCCcCcEEEc-CCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVM----------LEGSVKMKPDIFFSSLS--QQICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~----------~~~~~~~i~~~l~~lH~--~~ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      .|||+++=.||-.          .|.++-||..+|.||..  ..|||-||||.|||+. ++..+.+||+|||+++.+...
T Consensus       547 LEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMddd  626 (775)
T KOG1151|consen  547 LEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDD  626 (775)
T ss_pred             eeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCC
Confidence            4788886445543          24457789999999984  5699999999999984 344456999999999866543


Q ss_pred             CCC--------CCCcCCCCCcccccccCC---cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           68 SRP--------KSTVGTPAYIAPEVLSRR---EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        68 ~~~--------~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ...        ....||.||++||++.-.   +-.+.++||||+|||+|..+.|+.||........+...-.-+......
T Consensus       627 Sy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVq  706 (775)
T KOG1151|consen  627 SYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQ  706 (775)
T ss_pred             ccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceecc
Confidence            322        334699999999998643   222456999999999999999999998765543333222223344555


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +|.-+-++.++++||++||.+.-+.|..+.++..||||....
T Consensus       707 FP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~  748 (775)
T KOG1151|consen  707 FPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI  748 (775)
T ss_pred             CCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence            666667999999999999999999999999999999997543

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=197.72  Aligned_cols=162  Identities=29%  Similarity=0.402  Sum_probs=121.4

Q ss_pred             Cccccc-chHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcCC--CCCcEEEeccCCcccCC
Q 024572            1 MQLGVS-SLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS--PAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~a~~~~   65 (265)
                      ||+|.+ ||...+..=.            ++.-+..|+.|||.+|||||||||.||++...  +..-.||+|||.|+...
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            788888 8888876421            25556788999999999999999999998432  33346999999999888


Q ss_pred             CCCCCCCCcCCCCCcccccccC-CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh------------
Q 024572           66 LHSRPKSTVGTPAYIAPEVLSR-REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA------------  132 (265)
Q Consensus        66 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------  132 (265)
                      ......+..||..|.+||+... +.|... +|.|||||++|+++||..||.....+.+...++..+..            
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~t-VDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~  254 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTAT-VDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQE  254 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCce-eehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeec
Confidence            8888888899999999999985 555444 99999999999999999999876655432333222211            


Q ss_pred             -------hcccCCCCCCCCHH----HHHHHHHhcccCCCCCC
Q 024572          133 -------VQYKIPDYVHISQD----CRNLLSRIFVANPSRRI  163 (265)
Q Consensus       133 -------~~~~~~~~~~~~~~----~~~li~~~L~~dP~~R~  163 (265)
                             ....+|.+..++..    +-.++..+|..+|.+|.
T Consensus       255 ~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  255 EENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                   11223444444444    34577888999999999

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=4.5e-25  Score=194.98  Aligned_cols=165  Identities=25%  Similarity=0.355  Sum_probs=133.9

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      |||+.. ||.+-++..           ..+.||+.++.||.++++|||||-..|+|+.....  |||+|||+.+......
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt--VKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT--VKICDFGLMRALGENE  266 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce--eeeecccceeccCCCC
Confidence            678877 888887761           23778999999999999999999999999987655  9999999998766655


Q ss_pred             CCCCCc----CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 RPKSTV----GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ~~~~~~----~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ......    -...|+|||.++...++.. +|+|++||++|||++ |..||.+....    .+++++- ...+++.+..|
T Consensus       267 d~Yvm~p~rkvPfAWCaPEsLrh~kFSha-SDvWmyGVTiWEMFtyGEePW~G~~g~----qIL~~iD-~~erLpRPk~c  340 (1039)
T KOG0199|consen  267 DMYVMAPQRKVPFAWCAPESLRHRKFSHA-SDVWMYGVTIWEMFTYGEEPWVGCRGI----QILKNID-AGERLPRPKYC  340 (1039)
T ss_pred             cceEecCCCcCcccccCHhHhcccccccc-chhhhhhhhHHhhhccCCCCCCCCCHH----HHHHhcc-ccccCCCCCCC
Confidence            444322    3457999999999888655 999999999999998 78999997663    3344433 44556777789


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      ++++.+++++||..+|..|||+..|...-+
T Consensus       341 sedIY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  341 SEDIYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             hHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence            999999999999999999999999865433

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=187.36  Aligned_cols=157  Identities=22%  Similarity=0.272  Sum_probs=109.5

Q ss_pred             HHHHhccccchHHHHHhhhhcC---ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCCCCCC-cCCCCCcccccc
Q 024572           11 FVMLEGSVKMKPDIFFSSLSQQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKST-VGTPAYIAPEVL   85 (265)
Q Consensus        11 ~~~~~~~~~~i~~~l~~lH~~~---ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~-~~~~~y~aPE~~   85 (265)
                      |.++-.++..++.+|.|||...   ||||||||+|||+|.+..  .||+|||+|+.... ....... .||..|+|||++
T Consensus       173 W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~--aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~  250 (361)
T KOG1187|consen  173 WETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN--AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYA  250 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC--EEccCccCcccCCccccceeeecCCCCccCChhhh
Confidence            3344445666888999999754   999999999999998887  99999999975544 3322233 799999999999


Q ss_pred             cCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHhhh----cccCCCC--CCCC-----HHHHHHHH
Q 024572           86 SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE--DPKNFRKTISRIMAV----QYKIPDY--VHIS-----QDCRNLLS  152 (265)
Q Consensus        86 ~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~----~~~~~~~--~~~~-----~~~~~li~  152 (265)
                      .....+ .++||||||+++.|+++|+.+.....  ....+..+.......    ....|..  ...+     ..+..+..
T Consensus       251 ~~g~lt-~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~  329 (361)
T KOG1187|consen  251 STGKLT-EKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELAL  329 (361)
T ss_pred             ccCCcC-cccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHH
Confidence            876665 44999999999999999998877532  111122221111111    1111111  1222     22556778


Q ss_pred             HhcccCCCCCCCHHHHhc
Q 024572          153 RIFVANPSRRITIKEIKS  170 (265)
Q Consensus       153 ~~L~~dP~~R~s~~ell~  170 (265)
                      +|+..+|..||++.++++
T Consensus       330 ~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  330 RCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHcCcCCCcCcCHHHHHH
Confidence            999999999999999754

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4.3e-24  Score=182.04  Aligned_cols=122  Identities=25%  Similarity=0.456  Sum_probs=83.5

Q ss_pred             EEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCC------ChHHHHHH
Q 024572           53 LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE------DPKNFRKT  126 (265)
Q Consensus        53 vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~------~~~~~~~~  126 (265)
                      |||+|||-|...  ....+..+.|..|+|||++.+.+|.+. +||||++|++|||+||...|...+      +.+.+..+
T Consensus       393 vKIaDlGNACW~--~khFT~DIQTRQYRapEVllGsgY~~~-ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i  469 (590)
T KOG1290|consen  393 VKIADLGNACWV--HKHFTEDIQTRQYRAPEVLLGSGYSTS-ADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI  469 (590)
T ss_pred             EEEeeccchhhh--hhhhchhhhhhhccCcceeecCCCCCc-hhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence            566666665422  233344568899999999999999877 899999999999999999986432      22222222


Q ss_pred             HHHHhhhcc-----------------------cCCCC---------CCC----CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          127 ISRIMAVQY-----------------------KIPDY---------VHI----SQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       127 ~~~~~~~~~-----------------------~~~~~---------~~~----~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +..+.....                       ++..|         ..+    ..++.+||.-||+.+|++||||.++|+
T Consensus       470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            221111000                       00000         011    246789999999999999999999999


Q ss_pred             CcccCCC
Q 024572          171 HPWFLKN  177 (265)
Q Consensus       171 h~~f~~~  177 (265)
                      |||++..
T Consensus       550 hPwLn~~  556 (590)
T KOG1290|consen  550 HPWLNPV  556 (590)
T ss_pred             CccccCC
Confidence            9999743

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=5.5e-24  Score=186.25  Aligned_cols=158  Identities=20%  Similarity=0.307  Sum_probs=129.6

Q ss_pred             cccchHHHHHHhcc-----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            4 GVSSLSEFVMLEGS-----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         4 ~~~sL~~~~~~~~~-----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      |-++|.||++.+..           ..||.+++.||..+++|||||-..|+|+..+..  ||++|||+++.+..... +.
T Consensus       346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhi--VKvADFGLsRlMtgDTY-TA  422 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHI--VKVADFGLSRLMTGDTY-TA  422 (1157)
T ss_pred             cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccce--EEeeccchhhhhcCCce-ec
Confidence            45689999987653           667899999999999999999999999988776  99999999986544322 22


Q ss_pred             Cc---CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           73 TV---GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        73 ~~---~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ..   -...|.|||.+....++.+ +|||+||++||++.| |-.||.+.+..     .+..+....+++..+..|++.+.
T Consensus       423 HAGAKFPIKWTAPEsLAyNtFSiK-SDVWAFGVLLWEIATYGMsPYPGidlS-----qVY~LLEkgyRM~~PeGCPpkVY  496 (1157)
T KOG4278|consen  423 HAGAKFPIKWTAPESLAYNTFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYGLLEKGYRMDGPEGCPPKVY  496 (1157)
T ss_pred             ccCccCcccccCcccccccccccc-hhhHHHHHHHHHHHhcCCCCCCCccHH-----HHHHHHhccccccCCCCCCHHHH
Confidence            22   3457999999988888766 999999999999998 88899886532     23344556778888889999999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhc
Q 024572          149 NLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +|++.||.+.|..||++.++.+
T Consensus       497 eLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHH
Confidence            9999999999999999998854

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=9.4e-24  Score=194.01  Aligned_cols=146  Identities=24%  Similarity=0.384  Sum_probs=116.6

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC--CCc--CCCCCcccccccCCcCCCc
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK--STV--GTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~--~~~~y~aPE~~~~~~~~~~   93 (265)
                      ..||+.++.||+++.+|||||-..|||+..+..  +||+|||+|+.........  ...  -...|||||.+....++.+
T Consensus       424 a~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~--~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k  501 (609)
T KOG0200|consen  424 AYQIANGMEYLASVPCVHRDLAARNVLITKNKV--IKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK  501 (609)
T ss_pred             HHHHHHHHHHHhhCCccchhhhhhhEEecCCCE--EEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc
Confidence            678999999999999999999999999998866  9999999998543332221  112  2345999999999777655


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                       +||||+|+++||+++ |..||.+......+.+    ......+...+..++.++.++++.||..+|.+||++.++..
T Consensus       502 -SDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~----~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  502 -SDVWSFGILLWEIFTLGGTPYPGIPPTEELLE----FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             -chhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH----HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence             899999999999998 8899987543333322    23445566667789999999999999999999999999875

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.90  E-value=3.6e-24  Score=164.50  Aligned_cols=117  Identities=31%  Similarity=0.435  Sum_probs=91.2

Q ss_pred             CcccccchHHHHHHhc-------------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVMLEG-------------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-------------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||+-..||..|-....             ++-.+..++.|||+ ..|+|||+||+||||+..+.  ||+||||++.....
T Consensus       124 ME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~Gq--VKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  124 MELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQ--VKICDFGISGYLVD  201 (282)
T ss_pred             HHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCc--EEEcccccceeehh
Confidence            6666777776655321             12335778999995 57999999999999988776  99999999876555


Q ss_pred             CCCCCCCcCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh
Q 024572           67 HSRPKSTVGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP  120 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~  120 (265)
                      ....+...|...|||||.+..    ..|+-+ +||||||+.+.||.++++||......
T Consensus       202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vk-sDvWSLGItmiElA~lr~PY~~w~tp  258 (282)
T KOG0984|consen  202 SIAKTMDAGCKPYMAPERINPELNQKGYSVK-SDVWSLGITMIEMAILRFPYESWGTP  258 (282)
T ss_pred             hhHHHHhcCCCccCChhhcCcccCcccceee-hhhhhhhhhhhhhhhccccccccCCH
Confidence            444444678899999999854    355544 99999999999999999999887654

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.89  E-value=2.2e-24  Score=192.65  Aligned_cols=158  Identities=22%  Similarity=0.366  Sum_probs=129.6

Q ss_pred             cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CCCCCc
Q 024572            6 SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKSTV   74 (265)
Q Consensus         6 ~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~   74 (265)
                      ++|..|++.+.          .++-|++++.||-..|+|||||...|||++.+-.  +|++|||+++...... ...+..
T Consensus       715 GsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLv--CKVsDFGLSRvledd~~~~ytt~  792 (996)
T KOG0196|consen  715 GSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPEAAYTTL  792 (996)
T ss_pred             CcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceE--EEeccccceeecccCCCcccccc
Confidence            48888888764          3556899999999999999999999999998876  9999999998553333 111222


Q ss_pred             ---CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           75 ---GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        75 ---~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                         -..+|.|||.+...++++. +||||+|+++||+++ |..||...+..+.+..     ....+++|.+.+++..+.+|
T Consensus       793 GGKIPiRWTAPEAIa~RKFTsA-SDVWSyGIVmWEVmSyGERPYWdmSNQdVIka-----Ie~gyRLPpPmDCP~aL~qL  866 (996)
T KOG0196|consen  793 GGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA-----IEQGYRLPPPMDCPAALYQL  866 (996)
T ss_pred             CCccceeecChhHhhhcccCch-hhccccceEEEEecccCCCcccccchHHHHHH-----HHhccCCCCCCCCcHHHHHH
Confidence               2368999999998888654 999999999999887 9999998876544333     34567888888999999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcC
Q 024572          151 LSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h  171 (265)
                      +..||++|-..||++.+|+.+
T Consensus       867 MldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  867 MLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHHhhcCCCHHHHHHH
Confidence            999999999999999998764

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.89  E-value=2e-23  Score=181.39  Aligned_cols=162  Identities=21%  Similarity=0.295  Sum_probs=126.5

Q ss_pred             cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC---
Q 024572            6 SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---   71 (265)
Q Consensus         6 ~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~---   71 (265)
                      +.|.+|++.+.           +.+||++++.||.+.++|||||.+.|||++.+++  +||+|||+++.........   
T Consensus       620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~--iKiadfgmsR~lysg~yy~vqg  697 (807)
T KOG1094|consen  620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFT--IKIADFGMSRNLYSGDYYRVQG  697 (807)
T ss_pred             CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCccc--EEecCcccccccccCCceeeec
Confidence            58999999873           3778999999999999999999999999998887  9999999998554443322   


Q ss_pred             CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHHHHHhhh---cccCCCCCCCCHH
Q 024572           72 STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV--GAYPFEDQEDPKNFRKTISRIMAV---QYKIPDYVHISQD  146 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  146 (265)
                      ..+-...|||+|.+...++++. +|+|+||+++||+++  ...||....+.....+.. .....   ..-.+.+.-++..
T Consensus       698 r~vlpiRwmawEsillgkFtta-SDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~-~~~~~~~~~~~l~~P~~cp~~  775 (807)
T KOG1094|consen  698 RAVLPIRWMAWESILLGKFTTA-SDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAG-EFFRDQGRQVVLSRPPACPQG  775 (807)
T ss_pred             ceeeeeeehhHHHHHhccccch-hhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhh-hhcCCCCcceeccCCCcCcHH
Confidence            2345679999999998888655 999999999999865  788998766544333222 21111   1123445578999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..+-.+||+++++..|
T Consensus       776 lyelml~Cw~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  776 LYELMLRCWRRESEQRPSFEQLHLF  800 (807)
T ss_pred             HHHHHHHHhchhhhcCCCHHHHHHH
Confidence            9999999999999999999998653

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.89  E-value=1.1e-23  Score=176.76  Aligned_cols=159  Identities=27%  Similarity=0.388  Sum_probs=113.0

Q ss_pred             ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc-----------------CCC-C----------
Q 024572           16 GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-----------------SLL-H----------   67 (265)
Q Consensus        16 ~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~-----------------~~~-~----------   67 (265)
                      ..+.-++.++.++|++|||||||||.|+|.+... .+-.|+|||+|..                 ... .          
T Consensus       136 ~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t-~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~  214 (418)
T KOG1167|consen  136 WYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRT-QRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVA  214 (418)
T ss_pred             HHHHHHHHHhhhhhccCccccCCCcccccccccc-CCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccc
Confidence            3466678899999999999999999999997543 3578999999851                 000 0          


Q ss_pred             ------C-----------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHH-
Q 024572           68 ------S-----------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK-NFRKTIS-  128 (265)
Q Consensus        68 ------~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~-~~~~~~~-  128 (265)
                            .           ......||+.|+|||++...+..+.++||||.|+|+..+++++.||....+.. .+.++.. 
T Consensus       215 ~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~ti  294 (418)
T KOG1167|consen  215 TASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATI  294 (418)
T ss_pred             cccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHH
Confidence                  0           00122589999999999887766777999999999999999999996543321 1111110 


Q ss_pred             -------HH---------hh--------------------hccc-------CCC-CCCCCHHHHHHHHHhcccCCCCCCC
Q 024572          129 -------RI---------MA--------------------VQYK-------IPD-YVHISQDCRNLLSRIFVANPSRRIT  164 (265)
Q Consensus       129 -------~~---------~~--------------------~~~~-------~~~-~~~~~~~~~~li~~~L~~dP~~R~s  164 (265)
                             +.         ..                    ....       ... ....+..+.+|+.+||..||.+|.|
T Consensus       295 fG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRit  374 (418)
T KOG1167|consen  295 FGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRIT  374 (418)
T ss_pred             hChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhccc
Confidence                   00         00                    0000       000 0123457889999999999999999


Q ss_pred             HHHHhcCcccC
Q 024572          165 IKEIKSHPWFL  175 (265)
Q Consensus       165 ~~ell~h~~f~  175 (265)
                      ++++|.||||.
T Consensus       375 AEeALkHpFF~  385 (418)
T KOG1167|consen  375 AEDALKHPFFD  385 (418)
T ss_pred             HHHHhcCcCCc
Confidence            99999999997

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.88  E-value=1.1e-22  Score=197.36  Aligned_cols=164  Identities=15%  Similarity=0.140  Sum_probs=112.1

Q ss_pred             Cccccc-chHHHHHH------hccccchHHHHHhhh---hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVML------EGSVKMKPDIFFSSL---SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~------~~~~~~i~~~l~~lH---~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      |||+.+ +|.+++..      ..++.+++.++.|||   +++|+||||||+||+++.+..  .++. ||......   ..
T Consensus       762 ~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~--~~~~-~~~~~~~~---~~  835 (968)
T PLN00113        762 HEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE--PHLR-LSLPGLLC---TD  835 (968)
T ss_pred             EeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc--eEEE-eccccccc---cC
Confidence            688764 89888753      334678899999999   779999999999999987765  4443 55443221   11


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHHHHHhhh-------cccCCC---
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAV-------QYKIPD---  139 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~-------~~~~~~---  139 (265)
                      ....++..|+|||++.+..++. ++|||||||++|||++|+.||...... .............       ......   
T Consensus       836 ~~~~~t~~y~aPE~~~~~~~~~-~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  914 (968)
T PLN00113        836 TKCFISSAYVAPETRETKDITE-KSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS  914 (968)
T ss_pred             CCccccccccCcccccCCCCCc-ccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC
Confidence            2336789999999998877754 499999999999999999998543211 1111111110000       000000   


Q ss_pred             -CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          140 -YVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       140 -~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                       ......++.+++.+||..+|.+|||+.++++.
T Consensus       915 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        915 VNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence             00112356789999999999999999999864

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.88  E-value=3.2e-22  Score=166.79  Aligned_cols=158  Identities=16%  Similarity=0.307  Sum_probs=124.1

Q ss_pred             ccchHHHHHHhcc-----------------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            5 VSSLSEFVMLEGS-----------------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         5 ~~sL~~~~~~~~~-----------------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      -++|..|+..+..                 ..|++.++.|||++||||.||-..|++|++.-.  |||+|=.+++-.-+.
T Consensus       372 ~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~Lq--VkltDsaLSRDLFP~  449 (563)
T KOG1024|consen  372 VGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQ--VKLTDSALSRDLFPG  449 (563)
T ss_pred             cchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhee--EEeccchhccccCcc
Confidence            4578888874332                 456788899999999999999999999998754  999999888744322


Q ss_pred             C---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           68 S---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        68 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      .   ..........||+||.+.+..|++. +|+||||+++|||+| |+.|+...+..+. ...    ....++...+.++
T Consensus       450 DYhcLGDnEnRPvkWMslEal~n~~yssa-sDvWsfGVllWELmtlg~~PyaeIDPfEm-~~y----lkdGyRlaQP~NC  523 (563)
T KOG1024|consen  450 DYHCLGDNENRPVKWMSLEALQNSHYSSA-SDVWSFGVLLWELMTLGKLPYAEIDPFEM-EHY----LKDGYRLAQPFNC  523 (563)
T ss_pred             cccccCCCCCCcccccCHHHHhhhhhcch-hhhHHHHHHHHHHHhcCCCCccccCHHHH-HHH----HhccceecCCCCC
Confidence            2   1122235668999999999888655 999999999999998 8999977654332 222    3345666777799


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.++..++.-||...|++||+++++..
T Consensus       524 PDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  524 PDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             cHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            999999999999999999999999864

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=1.8e-22  Score=171.67  Aligned_cols=162  Identities=22%  Similarity=0.260  Sum_probs=112.1

Q ss_pred             ccchHHHHHHhcc--------ccchHHHHHhhh---------hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            5 VSSLSEFVMLEGS--------VKMKPDIFFSSL---------SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         5 ~~sL~~~~~~~~~--------~~~i~~~l~~lH---------~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      .+||.+|+..+.+        +..++.+|.|||         +..|+|||||..||||.++..  ..|+|||+|......
T Consensus       292 kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT--ccIaDFGLAl~~~p~  369 (534)
T KOG3653|consen  292 KGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT--CCIADFGLALRLEPG  369 (534)
T ss_pred             CCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc--EEeeccceeEEecCC
Confidence            3589999887653        666789999998         467999999999999998887  999999999766543


Q ss_pred             CCC---CCCcCCCCCcccccccCCcCCC-----chHhHHHHHHHHHHHHhCCCCCC-CC---------------CChHHH
Q 024572           68 SRP---KSTVGTPAYIAPEVLSRREYDG-----KLADVWSCGVTLYVMLVGAYPFE-DQ---------------EDPKNF  123 (265)
Q Consensus        68 ~~~---~~~~~~~~y~aPE~~~~~~~~~-----~~~DiwslG~~l~~ll~g~~pf~-~~---------------~~~~~~  123 (265)
                      ...   ...+||.+|||||++.+.-...     +..||||+|.++|||+++..-+. +.               ...+.+
T Consensus       370 ~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~m  449 (534)
T KOG3653|consen  370 KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEM  449 (534)
T ss_pred             CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHH
Confidence            322   2357999999999997743322     45899999999999998644332 10               011112


Q ss_pred             HHHHHHHhhhcccCCC-CC--CCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572          124 RKTISRIMAVQYKIPD-YV--HISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus       124 ~~~~~~~~~~~~~~~~-~~--~~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                      ...+.+ ...+..+|. +.  .-...+++.+..||..||+.|.|+.-+.
T Consensus       450 q~~VV~-kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~  497 (534)
T KOG3653|consen  450 QELVVR-KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVE  497 (534)
T ss_pred             HHHHHh-hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence            221111 111111221 11  1235678999999999999999987654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=4e-23  Score=164.78  Aligned_cols=172  Identities=22%  Similarity=0.323  Sum_probs=118.4

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK   71 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~   71 (265)
                      ||++.. +|..=+...|        ..+|++++|.|+|++++||||||.+||||-.....+|||||||..+....  ...
T Consensus       101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~--tV~  178 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT--TVK  178 (378)
T ss_pred             eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc--eeh
Confidence            455544 5554444433        37789999999999999999999999999655445899999998764322  222


Q ss_pred             CCcCCCCCcccccccCCc---C-CCchHhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHHHHHhhhcccCC-CCCCCCH
Q 024572           72 STVGTPAYIAPEVLSRRE---Y-DGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAVQYKIP-DYVHISQ  145 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~---~-~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~  145 (265)
                      ..-.+..|.+||......   + ..+.+|+|.||+++|.+++|++||...... ..+.+..+.........| .+..+++
T Consensus       179 ~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~  258 (378)
T KOG1345|consen  179 YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSE  258 (378)
T ss_pred             hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCH
Confidence            223566789998764321   1 234589999999999999999999854322 233344433333333334 3456889


Q ss_pred             HHHHHHHHhcccCCCCC---CCHHHHhcCccc
Q 024572          146 DCRNLLSRIFVANPSRR---ITIKEIKSHPWF  174 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R---~s~~ell~h~~f  174 (265)
                      .+..+.++-|..+|+.|   .++.......|.
T Consensus       259 ~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  259 KALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             HHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence            99999999999999999   455555555554

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.86  E-value=1.8e-22  Score=177.83  Aligned_cols=174  Identities=27%  Similarity=0.400  Sum_probs=133.1

Q ss_pred             Cccccc-chHHHHHHhccccc---------hHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEGSVKM---------KPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~~~~---------i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||||++ +|.|--...+.++.         .+.++.|||++|-+|||||-.|||+++.+.  +|++|||.+..... -..
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gD--vklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGD--VKLADFGVSAQITATIAK  168 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCc--eeecccCchhhhhhhhhh
Confidence            899998 89887776665443         456789999999999999999999998887  99999999754332 344


Q ss_pred             CCCCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC---CCCCC
Q 024572           70 PKSTVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP---DYVHI  143 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  143 (265)
                      .+.++||+.|||||+..   ...| ...+|+|++|+...++---++|.......    +.+.-.....+..|   +...+
T Consensus       169 rksfiGtpywmapEvaaverkggy-nqlcdiwa~gitAiel~eLqpplfdlhpm----r~l~LmTkS~~qpp~lkDk~kw  243 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGY-NQLCDIWALGITAIELGELQPPLFDLHPM----RALFLMTKSGFQPPTLKDKTKW  243 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccc-cccccccccccchhhhhhcCCcccccchH----HHHHHhhccCCCCCcccCCccc
Confidence            56788999999999863   3344 45599999999999998777775543322    22222223333333   34467


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCChh
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE  181 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~~  181 (265)
                      ++-+.+|++.+|.++|++||+++.+|+|||......+.
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~r  281 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRR  281 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhH
Confidence            89999999999999999999999999999998775543

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.7e-21  Score=164.72  Aligned_cols=163  Identities=23%  Similarity=0.322  Sum_probs=113.8

Q ss_pred             ccchHHHHHHhcc--------ccchHHHHHhhh--------hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-
Q 024572            5 VSSLSEFVMLEGS--------VKMKPDIFFSSL--------SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-   67 (265)
Q Consensus         5 ~~sL~~~~~~~~~--------~~~i~~~l~~lH--------~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-   67 (265)
                      .+||+||+.+...        +..++.+|.|||        +..|.|||||..|||+.+++.  .-|+|+|+|...... 
T Consensus       293 ~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~--C~IADLGLAv~h~~~t  370 (513)
T KOG2052|consen  293 HGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSDT  370 (513)
T ss_pred             CCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc--EEEeeceeeEEecccC
Confidence            3699999997653        334677899999        456999999999999998887  999999998643322 


Q ss_pred             ----CCCCCCcCCCCCcccccccCC----cCC-CchHhHHHHHHHHHHHHhC----------CCCCCCCCChHHHHHHHH
Q 024572           68 ----SRPKSTVGTPAYIAPEVLSRR----EYD-GKLADVWSCGVTLYVMLVG----------AYPFEDQEDPKNFRKTIS  128 (265)
Q Consensus        68 ----~~~~~~~~~~~y~aPE~~~~~----~~~-~~~~DiwslG~~l~~ll~g----------~~pf~~~~~~~~~~~~~~  128 (265)
                          ...+..+||.+|||||++-..    .+. .+.+||||||+++||++.+          +.||.+..+.+.-.+.+.
T Consensus       371 ~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMr  450 (513)
T KOG2052|consen  371 DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMR  450 (513)
T ss_pred             CcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHh
Confidence                233556899999999998542    111 2348999999999999853          578876544433333333


Q ss_pred             HHhh-hcccCCCCCCC--C---HHHHHHHHHhcccCCCCCCCHHHHh
Q 024572          129 RIMA-VQYKIPDYVHI--S---QDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus       129 ~~~~-~~~~~~~~~~~--~---~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                      .+.. ...+...+..+  .   ..+..+|+.||..+|..|.|+-.+.
T Consensus       451 kVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  451 KVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             cceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            3222 22222221111  1   3456789999999999999987664

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.85  E-value=5.5e-21  Score=152.00  Aligned_cols=133  Identities=36%  Similarity=0.530  Sum_probs=107.9

Q ss_pred             Ccccc-cchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. .+|.+++...          .++.+++.++.+||++|++|+||+|.||+++. .+.  ++|+|||.+.......
T Consensus        70 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~--~~l~d~~~~~~~~~~~  147 (215)
T cd00180          70 MEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGK--VKLADFGLSKLLTSDK  147 (215)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCc--EEEecCCceEEccCCc
Confidence            56777 5888887754          24667888999999999999999999999987 554  9999999987443322


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       ......+...|++||.+......+.+.|+|++|++++++                                     ..+
T Consensus       148 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~  190 (215)
T cd00180         148 SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PEL  190 (215)
T ss_pred             chhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHH
Confidence             123345788899999987752334559999999999998                                     477


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                      .+++.+|+..+|.+||++.++++|+
T Consensus       191 ~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         191 KDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHhhCCcccCcCHHHHhhCC
Confidence            8999999999999999999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=8.6e-21  Score=170.69  Aligned_cols=158  Identities=23%  Similarity=0.350  Sum_probs=126.1

Q ss_pred             ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCc
Q 024572            5 VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV   74 (265)
Q Consensus         5 ~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~   74 (265)
                      .++|.|+.+.+.          +..||+.++.|||.+++|||||-..|||+.+-..  +|+.|||+++............
T Consensus       781 ~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~h--vkitdfgla~ll~~d~~ey~~~  858 (1177)
T KOG1025|consen  781 LGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNH--VKITDFGLAKLLAPDEKEYSAP  858 (1177)
T ss_pred             cchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCe--EEEEecchhhccCccccccccc
Confidence            457888877543          4778999999999999999999999999987665  9999999998665544333222


Q ss_pred             ---CCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           75 ---GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        75 ---~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                         -.+.|||-|.+....+... +|||||||++||++| |..|+.+....+     +........+++.+..++-++.-+
T Consensus       859 ~gK~pikwmale~i~~~~~thq-SDVWsfGVtiWElmTFGa~Py~gi~~~e-----I~dlle~geRLsqPpiCtiDVy~~  932 (1177)
T KOG1025|consen  859 GGKVPIKWMALESIRIRKYTHQ-SDVWSFGVTIWELMTFGAKPYDGIPAEE-----IPDLLEKGERLSQPPICTIDVYMV  932 (1177)
T ss_pred             ccccCcHHHHHHHhhccCCCch-hhhhhhhhhHHHHHhcCCCccCCCCHHH-----hhHHHhccccCCCCCCccHHHHHH
Confidence               3457899999988888655 999999999999998 899998865432     223334444577777899999999


Q ss_pred             HHHhcccCCCCCCCHHHHhc
Q 024572          151 LSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+||..|+..||+++++..
T Consensus       933 mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  933 MVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HHHHhccCcccCccHHHHHH
Confidence            99999999999999988754

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.83  E-value=1.9e-21  Score=168.99  Aligned_cols=107  Identities=32%  Similarity=0.481  Sum_probs=94.7

Q ss_pred             chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCC
Q 024572            7 SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTP   77 (265)
Q Consensus         7 sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~   77 (265)
                      .|.+||..+.         +.+|++.++.+||++||||||||-+||.++++|.  +||+|||.|.. ........++||.
T Consensus       656 DLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~--~klidfgsaa~-~ksgpfd~f~gtv  732 (772)
T KOG1152|consen  656 DLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGF--VKLIDFGSAAY-TKSGPFDVFVGTV  732 (772)
T ss_pred             chhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCe--EEEeeccchhh-hcCCCcceeeeec
Confidence            7888887654         4788999999999999999999999999998887  99999998863 3445566788999


Q ss_pred             CCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCC
Q 024572           78 AYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFED  116 (265)
Q Consensus        78 ~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~  116 (265)
                      .|.|||++.+.+|-++..|||++|++||.++....||.+
T Consensus       733 ~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  733 DYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             cccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            999999999999999989999999999999999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.82  E-value=1.7e-20  Score=172.89  Aligned_cols=149  Identities=34%  Similarity=0.545  Sum_probs=119.0

Q ss_pred             HHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC----------------CCCCCcCCCCCcccccc
Q 024572           22 PDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS----------------RPKSTVGTPAYIAPEVL   85 (265)
Q Consensus        22 ~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~----------------~~~~~~~~~~y~aPE~~   85 (265)
                      +.++.|+|+.||+|||+||+|.+|..-+.  +|++|||+++......                ..+..+||+.|+|||++
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGh--iKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGH--IKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeeccc--ccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            46789999999999999999999987765  9999999986322110                11344799999999999


Q ss_pred             cCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-CCCCCHHHHHHHHHhcccCCCCCC-
Q 024572           86 SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQDCRNLLSRIFVANPSRRI-  163 (265)
Q Consensus        86 ~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-  163 (265)
                      ...+|. +.+|+|++|+|+|+.+.|+.||.+....+.+...+....    .+|. -..++++++++|.++|..+|..|. 
T Consensus       231 lrqgyg-kpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i----~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  231 LRQGYG-KPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI----EWPEEDEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             hhhccC-CCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc----cccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence            988885 559999999999999999999999876655555444322    2222 224788999999999999999997 


Q ss_pred             --CHHHHhcCcccCCC
Q 024572          164 --TIKEIKSHPWFLKN  177 (265)
Q Consensus       164 --s~~ell~h~~f~~~  177 (265)
                        .+-++.+|+||+..
T Consensus       306 t~ga~evk~h~ff~~L  321 (1205)
T KOG0606|consen  306 TGGALEVKQHGFFQLL  321 (1205)
T ss_pred             cchhhhhhhccceeec
Confidence              57789999999754

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.79  E-value=2.2e-20  Score=161.36  Aligned_cols=160  Identities=24%  Similarity=0.351  Sum_probs=114.6

Q ss_pred             Cccccc-chHHHHHHhcc------------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS------------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~------------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      |++|.. +|.||+..+..            .+|+..++.|   +|.+|+|+||.||+...+..  +||+|||+.......
T Consensus       335 Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q--~kIgDFgl~ts~~~~  409 (516)
T KOG1033|consen  335 MNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQ--LKIGDFGLVTSQDKD  409 (516)
T ss_pred             hhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchh--hhhhhhhheeecccC
Confidence            889988 89999975432            5556666666   99999999999999977765  999999998654433


Q ss_pred             C-------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCC
Q 024572           68 S-------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPD  139 (265)
Q Consensus        68 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  139 (265)
                      .       ..+...||.+||+||.+.+..|..+ +||||||++++++++ -...|..       ......+....++...
T Consensus       410 ~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k-vdIyaLGlil~EL~~~f~T~~er-------~~t~~d~r~g~ip~~~  481 (516)
T KOG1033|consen  410 ETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK-VDIYALGLILAELLIQFSTQFER-------IATLTDIRDGIIPPEF  481 (516)
T ss_pred             CcccchhhhhhhcccccccCCHHHHhhhhhhhh-cchhhHHHHHHHHHHHhccHHHH-------HHhhhhhhcCCCChHH
Confidence            3       3344579999999999999888655 999999999999996 2222211       1222222222221112


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ..+. +.-..|+.+||...|.+||++.+.-.|.|.
T Consensus       482 ~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  482 LQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             hhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            2222 344689999999999999988777777664

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=6.8e-19  Score=147.58  Aligned_cols=158  Identities=22%  Similarity=0.323  Sum_probs=112.8

Q ss_pred             ccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEE--cCCCCCcEEEeccCCcccCCCCC------
Q 024572            5 VSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHS------   68 (265)
Q Consensus         5 ~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll--~~~~~~~vkl~Dfg~a~~~~~~~------   68 (265)
                      ..+|.+++..+.        ++.|+++++.|||.+||.|||+|.+|||+  +.+..+.+.|+|||+|-....+.      
T Consensus       326 ~~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~  405 (598)
T KOG4158|consen  326 RQTLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYE  405 (598)
T ss_pred             hhhHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccc
Confidence            446777766543        47788999999999999999999999998  56667789999999874322211      


Q ss_pred             -CCCCCcCCCCCcccccccCCc-----CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           69 -RPKSTVGTPAYIAPEVLSRRE-----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                       ..-...|+-.-||||+....+     ....++|.|+.|.+.||++....||........-....+   ..+ -.+.+..
T Consensus       406 S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq---e~q-LPalp~~  481 (598)
T KOG4158|consen  406 SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ---ESQ-LPALPSR  481 (598)
T ss_pred             cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh---hhh-CCCCccc
Confidence             111224777889999986422     122348999999999999999999987432110011111   111 1234457


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHH
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIK  166 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~  166 (265)
                      +++.+++|+..+|..||++|++..
T Consensus       482 vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  482 VPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             CChHHHHHHHHHhcCCccccCCcc
Confidence            899999999999999999999854

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.78  E-value=8.5e-20  Score=150.89  Aligned_cols=131  Identities=22%  Similarity=0.281  Sum_probs=87.0

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCC-------cC
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR-------EY   90 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~-------~~   90 (265)
                      ..|++.++.+||+.||||+||+|+|++++.+|.  ++|+||+...........  ...+..|.|||.....       ..
T Consensus       151 T~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~--v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~  226 (288)
T PF14531_consen  151 TVQMIRLVANLHSYGLVHGDIKPENFLLDQDGG--VFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAP  226 (288)
T ss_dssp             HHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS---EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEE
T ss_pred             HHHHHHHHHHHhhcceEecccceeeEEEcCCCC--EEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccce
Confidence            355678889999999999999999999998876  999999876543322111  3345789999977442       12


Q ss_pred             CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCC
Q 024572           91 DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRR  162 (265)
Q Consensus        91 ~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  162 (265)
                      .+.+.|.|+||+++|.|+|+..||.........          ...+....++++.++.||.++|..+|.+|
T Consensus       227 ~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~----------~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  227 YTFATDAWQLGITLYSLWCGRLPFGLSSPEADP----------EWDFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             E-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTS----------GGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             eeeccCHHHHHHHHHHHHHccCCCCCCCccccc----------cccchhcCCcCHHHHHHHHHHccCCcccC
Confidence            245689999999999999999999865332110          00223333688999999999999999987

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.2e-19  Score=159.65  Aligned_cols=153  Identities=31%  Similarity=0.462  Sum_probs=121.0

Q ss_pred             hHHHHHHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccC
Q 024572            8 LSEFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR   87 (265)
Q Consensus         8 L~~~~~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~   87 (265)
                      .+++...+...--++-++.++|+.+|+|||+|++||+++.+|.  +++.|||.++........   |||..|||||++.+
T Consensus        93 ~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh--i~~tdfglske~v~~~~~---cgt~eymApEI~~g  167 (612)
T KOG0603|consen   93 MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH--IKLTDFGLSKEAVKEKIA---CGTYEYRAPEIING  167 (612)
T ss_pred             chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc--cccCCchhhhHhHhhhhc---ccchhhhhhHhhhc
Confidence            3444444444555666788999999999999999999998886  999999998865444332   89999999999983


Q ss_pred             CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCC---
Q 024572           88 REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRIT---  164 (265)
Q Consensus        88 ~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s---  164 (265)
                        . ..++|.||+|+++++|++|..||..        ..+.++.......|.  .++..+++++..++..+|.+|.-   
T Consensus       168 --h-~~a~D~ws~gvl~felltg~~pf~~--------~~~~~Il~~~~~~p~--~l~~~a~~~~~~l~~r~p~nrLg~~~  234 (612)
T KOG0603|consen  168 --H-LSAADWWSFGVLAFELLTGTLPFGG--------DTMKRILKAELEMPR--ELSAEARSLFRQLFKRNPENRLGAGP  234 (612)
T ss_pred             --c-CCcccchhhhhhHHHHhhCCCCCch--------HHHHHHhhhccCCch--hhhHHHHHHHHHHHhhCHHHHhccCc
Confidence              2 2348999999999999999999987        334444444444444  68899999999999999999984   


Q ss_pred             --HHHHhcCcccCCCC
Q 024572          165 --IKEIKSHPWFLKNL  178 (265)
Q Consensus       165 --~~ell~h~~f~~~~  178 (265)
                        +.++++|+||....
T Consensus       235 ~~~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  235 DGVDEIKQHEFFQSID  250 (612)
T ss_pred             chhHHHhccchheeee
Confidence              57999999997653

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.76  E-value=2.1e-18  Score=139.18  Aligned_cols=113  Identities=35%  Similarity=0.529  Sum_probs=89.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++....          .+.+++.++.+||+++++|+||+|.||+++.++.  ++|+|||++....... 
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~--~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGL--VKLADFGLARFIHRDLA  153 (225)
T ss_pred             EeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeeCceeeEecCccc
Confidence            456666 8888876543          3566788899999999999999999999987754  9999999987554332 


Q ss_pred             -CCCCCcCCCCCcccccc-cCCcCCCchHhHHHHHHHHHHHHhCCCCCCC
Q 024572           69 -RPKSTVGTPAYIAPEVL-SRREYDGKLADVWSCGVTLYVMLVGAYPFED  116 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~-~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~  116 (265)
                       ......++..|++||.+ ....+.. ++|+|+||+++++|++|+.||..
T Consensus       154 ~~~~~~~~~~~~~~pe~~~~~~~~~~-~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVLLGGKGYGE-AVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccccceeccCCcCCHhHhcCCCCCCc-hhhHHHHHHHHHHHHHCCCCccc
Confidence             22345678889999998 4444444 69999999999999999999966

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.73  E-value=5.9e-17  Score=138.69  Aligned_cols=168  Identities=20%  Similarity=0.109  Sum_probs=119.8

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-C--CcEEEeccCCcc--cC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-A--PRLKICDFGYSK--SS   64 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~--~~vkl~Dfg~a~--~~   64 (265)
                      |++.++||.++.....           +..|++.+|.++|+.|++||||||.|+++.... .  ..+.|.|||+++  ..
T Consensus       100 M~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~  179 (322)
T KOG1164|consen  100 MSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKY  179 (322)
T ss_pred             EeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccc
Confidence            8899999999886554           144678889999999999999999999997553 1  359999999998  32


Q ss_pred             CCCC--------C-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc
Q 024572           65 LLHS--------R-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY  135 (265)
Q Consensus        65 ~~~~--------~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  135 (265)
                      ....        . ...+.||..|.++.+..+.... ++.|+||++.++.+++.|..||.................. ..
T Consensus       180 ~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~-r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~-~~  257 (322)
T KOG1164|consen  180 VGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQG-RRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK-LL  257 (322)
T ss_pred             cCCCCcccccCCCCccCCCCccccccHHHhCCCccC-CchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh-hc
Confidence            1111        1 1234599999999998887765 4489999999999999999999776543332222211111 11


Q ss_pred             cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          136 KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       136 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ........+..+..+...+-..+...+|....+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  258 TDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             cccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            11122234567777777777788888998777654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.72  E-value=5.9e-17  Score=136.90  Aligned_cols=159  Identities=31%  Similarity=0.462  Sum_probs=114.6

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-------CCCCCcCCCCCcccccccCC-
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-------RPKSTVGTPAYIAPEVLSRR-   88 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-------~~~~~~~~~~y~aPE~~~~~-   88 (265)
                      .+.+++.++.|+|+.|++|||+||+||+++.... .++++|||.++......       ......++..|++||.+.+. 
T Consensus       106 ~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~  184 (384)
T COG0515         106 ILAQILSALEYLHSKGIIHRDIKPENILLDRDGR-VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS  184 (384)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC-eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCC
Confidence            3666788888999999999999999999987652 38999999987443332       23456799999999999874 


Q ss_pred             -cCCCchHhHHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHHHHHhhhcccCCCCCCC----CHHHHHHHHHhcccCCC
Q 024572           89 -EYDGKLADVWSCGVTLYVMLVGAYPFEDQED---PKNFRKTISRIMAVQYKIPDYVHI----SQDCRNLLSRIFVANPS  160 (265)
Q Consensus        89 -~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~  160 (265)
                       .......|+|++|++++++++|..||.....   .......+..........+.....    ...+.+++.+++..+|.
T Consensus       185 ~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (384)
T COG0515         185 LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPK  264 (384)
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCch
Confidence             3445569999999999999999999876653   222222222211110111111111    25789999999999999


Q ss_pred             CCCCHHHHhcCcccCC
Q 024572          161 RRITIKEIKSHPWFLK  176 (265)
Q Consensus       161 ~R~s~~ell~h~~f~~  176 (265)
                      .|.+......++|...
T Consensus       265 ~r~~~~~~~~~~~~~~  280 (384)
T COG0515         265 NRLSSSSDLSHDLLAH  280 (384)
T ss_pred             hcCCHHHHhhchHhhC
Confidence            9999999888866543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.70  E-value=2.8e-17  Score=152.38  Aligned_cols=143  Identities=20%  Similarity=0.266  Sum_probs=101.0

Q ss_pred             hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC----CC----cCCCCCccccccc
Q 024572           15 EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK----ST----VGTPAYIAPEVLS   86 (265)
Q Consensus        15 ~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~----~~----~~~~~y~aPE~~~   86 (265)
                      +.++=|++.++..+|..||+|||||.+||||++-.-  +.|+||..-+.........    .+    ....+|.|||.+.
T Consensus       123 kWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW--~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv  200 (1431)
T KOG1240|consen  123 KWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNW--LYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFV  200 (1431)
T ss_pred             HHHHHHHHHHHHHHHHcCccccccccceEEEeeech--hhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhh
Confidence            334557889999999999999999999999987554  8999998766433222211    11    2345799999985


Q ss_pred             CCc----------CCCchHhHHHHHHHHHHHHh-CCCCCCCCCC-------hHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           87 RRE----------YDGKLADVWSCGVTLYVMLV-GAYPFEDQED-------PKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        87 ~~~----------~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ...          .-.++.||||+||++.||++ |++||.-..-       .......+..       ++     +..++
T Consensus       201 ~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~-------Ie-----d~~~R  268 (1431)
T KOG1240|consen  201 SALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEK-------IE-----DVSLR  268 (1431)
T ss_pred             ccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHh-------Cc-----CccHH
Confidence            422          12456899999999999998 7888843110       0001111111       11     33689


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +||..|++.||.+|.++++.|+.
T Consensus       269 nlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  269 NLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHccCchhccCHHHHHHh
Confidence            99999999999999999999975

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.65  E-value=2.1e-16  Score=138.85  Aligned_cols=166  Identities=22%  Similarity=0.251  Sum_probs=117.6

Q ss_pred             cccc-chHHHHHHhc----------cccchHHHHHhhhhcCc-eecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            3 LGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQI-CHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         3 ~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~i-vH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      +|.. +|.|.+....          +++-|+.++.|+|+-.| .|+.|++.|++++....  +||+|||+.......   
T Consensus        28 ~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~--lklt~~Gl~~~~~~~~~~  105 (484)
T KOG1023|consen   28 YCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWV--LKLTDFGLNSLLEETAEP  105 (484)
T ss_pred             eecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEE--EEechhhhcccccccccc
Confidence            4544 7777777633          36678889999997776 99999999999998876  999999987644221   


Q ss_pred             CCCCCCcCCCCCcccccccCCcC------CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCC
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREY------DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPD  139 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~------~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~  139 (265)
                      ...........|.|||.+.....      .+++.|+||+|++++++++.+.||..........+++..+.....  ..|.
T Consensus       106 ~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~  185 (484)
T KOG1023|consen  106 EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPS  185 (484)
T ss_pred             cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcc
Confidence            11112224557999999977421      245589999999999999999999875433322334433333111  1121


Q ss_pred             ---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          140 ---YVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       140 ---~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                         .....+.+..++.+||..+|.+||++.++-.
T Consensus       186 i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  186 IELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             hhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence               1145567899999999999999999988754

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.64  E-value=1.7e-15  Score=124.56  Aligned_cols=118  Identities=24%  Similarity=0.284  Sum_probs=96.5

Q ss_pred             CcccccchHHHHHHhcc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCC---CcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLEGS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA---PRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~---~~vkl~Dfg~a~~~~~~   67 (265)
                      |||.++||+|+.-.++.          ++|++..+.|+|++.+|.|||||+|+||...+.   ..|.++|||+|+.....
T Consensus       103 idLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  103 IDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             hhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence            78999999999987764          666778899999999999999999999964332   24899999999865433


Q ss_pred             CC--------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC
Q 024572           68 SR--------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED  119 (265)
Q Consensus        68 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~  119 (265)
                      ..        .++..||..||+--...+...+.. .|+=|||-++++.|.|..||.+...
T Consensus       183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRR-DDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRR-DDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             cccccCccccccccccceeeeEeeccccchhhhh-hhHHHhhhhhhhhccCCCccccccC
Confidence            22        234569999999988888776544 8999999999999999999988643

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.62  E-value=1.5e-15  Score=119.82  Aligned_cols=164  Identities=17%  Similarity=0.164  Sum_probs=116.6

Q ss_pred             CcccccchHHHHHHhcc----------ccchHHHHHhhhhcCceecCCCcCcEEEcCC-CCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEGS----------VKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~~----------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |+|.++||.++...+..          +.|++..+.|+|.+++|||||||+|+|..-. -..++.|+|||+|+.......
T Consensus        90 MdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   90 MDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             eeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence            89999999998876542          5566778999999999999999999998432 123589999999986543322


Q ss_pred             --------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC---
Q 024572           70 --------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP---  138 (265)
Q Consensus        70 --------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---  138 (265)
                              .....||..|.+--...+...+ ...|+=|+|.++.++..|..||.+...... .+....+.......|   
T Consensus       170 ~~HIpyre~r~ltGTaRYASinAh~g~eqS-RRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QKyEkI~EkK~s~~ie~  247 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASINAHLGIEQS-RRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQKYEKISEKKMSTPIEV  247 (341)
T ss_pred             cccCccccCCccceeeeehhhhhhhhhhhh-hhhhhhhhcceeeeeecCCCcccccchhhH-HHHHHHHHHhhcCCCHHH
Confidence                    2334689999987777665544 448999999999999999999998654322 122222322222222   


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIK  166 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~  166 (265)
                      ....+|.++.-.+.-|-..--++-|...
T Consensus       248 LC~G~P~EF~myl~Y~R~L~F~E~Pdy~  275 (341)
T KOG1163|consen  248 LCKGFPAEFAMYLNYCRGLGFEEKPDYM  275 (341)
T ss_pred             HhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence            2346788888888888777667777643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=6e-16  Score=141.37  Aligned_cols=158  Identities=31%  Similarity=0.482  Sum_probs=124.5

Q ss_pred             cccchHHHHHhhh-hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CC---CCCCCcC-CCCCcccccccCCcC
Q 024572           17 SVKMKPDIFFSSL-SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HS---RPKSTVG-TPAYIAPEVLSRREY   90 (265)
Q Consensus        17 ~~~~i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~---~~~~~~~-~~~y~aPE~~~~~~~   90 (265)
                      .++++..++.|+| ..++.|+||||+|.+++.++. .++++|||+|..... ..   .....+| ++.|+|||...+..+
T Consensus       128 ~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~  206 (601)
T KOG0590|consen  128 YLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAY  206 (601)
T ss_pred             hhhhhccCccccCcccccccCCCCCccchhccCCC-cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhh
Confidence            4677888999999 999999999999999998873 399999999976544 22   2233468 999999999998777


Q ss_pred             CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           91 DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        91 ~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+..|+||.|+++..+++|..|+................. .......+..++....+++.+++..+|..|.+.+++..
T Consensus       207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cCCCcccccccccccccccCCCCccccccccccceeecccc-cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            77779999999999999999999976554332111111100 12234455678889999999999999999999999999


Q ss_pred             CcccCC
Q 024572          171 HPWFLK  176 (265)
Q Consensus       171 h~~f~~  176 (265)
                      ++|+..
T Consensus       286 d~~~~~  291 (601)
T KOG0590|consen  286 DNWLSS  291 (601)
T ss_pred             cccccc
Confidence            999976

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.51  E-value=1.9e-14  Score=113.69  Aligned_cols=116  Identities=12%  Similarity=0.052  Sum_probs=80.5

Q ss_pred             Cccccc-chHHHHHHh--ccccchHHHHHhhhhcCceecCC-CcCcEEEcCCCCCcEEEeccCCcccCCCCCCC----C-
Q 024572            1 MQLGVS-SLSEFVMLE--GSVKMKPDIFFSSLSQQICHRDL-KLENTLLDGSPAPRLKICDFGYSKSSLLHSRP----K-   71 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--~~~~~i~~~l~~lH~~~ivH~dl-kp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~----~-   71 (265)
                      ||+..+ +|.+.....  ....+++.++.++|++||+|||| ||.|||++.++.  ++|+|||+|.........    . 
T Consensus        77 meyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~--i~LIDFG~A~~~~~~~~~~r~L~~  154 (218)
T PRK12274         77 RSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGS--PAVIDFQLAVRGNPRARWMRLLAR  154 (218)
T ss_pred             EeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCC--EEEEECCCceecCCcchHHHHHHH
Confidence            566545 676543211  24567788999999999999999 799999987665  999999999744432210    0 


Q ss_pred             ---------CCcCCCCCcccccccCC-cCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Q 024572           72 ---------STVGTPAYIAPEVLSRR-EYDGKLADVWSCGVTLYVMLVGAYPFEDQE  118 (265)
Q Consensus        72 ---------~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~ll~g~~pf~~~~  118 (265)
                               ....++.|++|+...-. ..+-...+.++.|+-+|.++|++.++.+..
T Consensus       155 rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        155 EDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence                     01256777777754332 222233688899999999999998876543

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.45  E-value=2.7e-13  Score=109.04  Aligned_cols=139  Identities=22%  Similarity=0.273  Sum_probs=104.0

Q ss_pred             hHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCC--CchHh
Q 024572           21 KPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD--GKLAD   96 (265)
Q Consensus        21 i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~--~~~~D   96 (265)
                      ++.++.|||+..  |.---|....|+||.+-..++-.+|--++.      ........+.|++||.+..++.+  ..++|
T Consensus       298 iargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf------qe~gr~y~pawmspealqrkped~n~raad  371 (448)
T KOG0195|consen  298 IARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF------QEVGRAYSPAWMSPEALQRKPEDLNIRAAD  371 (448)
T ss_pred             HHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee------eccccccCcccCCHHHHhcCchhcchhhhh
Confidence            677899999754  555678899999998887666677754432      12234567899999999876644  35689


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572           97 VWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus        97 iwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                      +|||++++|++.|...||......+.-.+    +.-...+...++.++..+..|+.-|+..||.+||.+..++
T Consensus       372 mwsfaillwel~trevpfadlspmecgmk----ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  372 MWSFAILLWELNTREVPFADLSPMECGMK----IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHHHHHHhhccccccccCCchhhhhh----hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            99999999999999999988765433222    2222333444457899999999999999999999987654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.44  E-value=5.2e-14  Score=121.21  Aligned_cols=85  Identities=15%  Similarity=0.069  Sum_probs=63.0

Q ss_pred             Cccccc-chHHHHH--HhccccchHHHHHhhhhcCceecCC-CcCcEEEcCCCCCcEEEeccCCcccCCCCCCC------
Q 024572            1 MQLGVS-SLSEFVM--LEGSVKMKPDIFFSSLSQQICHRDL-KLENTLLDGSPAPRLKICDFGYSKSSLLHSRP------   70 (265)
Q Consensus         1 me~~~~-sL~~~~~--~~~~~~~i~~~l~~lH~~~ivH~dl-kp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~------   70 (265)
                      ||++.+ +|.....  ...++.+++.++.|||++||+|||| ||+|||++.++.  +||+|||+|+........      
T Consensus        97 mE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~--ikLiDFGlA~~~~~~~~~~~~~~~  174 (365)
T PRK09188         97 RGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE--AAVIDFQLASVFRRRGALYRIAAY  174 (365)
T ss_pred             EEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC--EEEEECccceecccCcchhhhhhh
Confidence            788865 6753211  1235677899999999999999999 999999976654  999999999854332211      


Q ss_pred             ---CCCcCCCCCcccccccC
Q 024572           71 ---KSTVGTPAYIAPEVLSR   87 (265)
Q Consensus        71 ---~~~~~~~~y~aPE~~~~   87 (265)
                         ....++..|+|||.+..
T Consensus       175 ~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        175 EDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             hhhhhhhccCccCCcccCCh
Confidence               23357788999999854

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.39  E-value=5.7e-14  Score=113.05  Aligned_cols=93  Identities=13%  Similarity=0.117  Sum_probs=66.9

Q ss_pred             Cccccc-chHHHHHH-hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCC
Q 024572            1 MQLGVS-SLSEFVML-EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA   78 (265)
Q Consensus         1 me~~~~-sL~~~~~~-~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~   78 (265)
                      ||++.+ +|.++... ...+.++..++..+|+.|++|||+||.||+++.++   ++|+|||..+........        
T Consensus       122 mEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g---i~liDfg~~~~~~e~~a~--------  190 (232)
T PRK10359        122 IEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG---LRIIDLSGKRCTAQRKAK--------  190 (232)
T ss_pred             EEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC---EEEEECCCcccccchhhH--------
Confidence            788887 89887432 12355788889999999999999999999998655   999999977533211110        


Q ss_pred             CcccccccCCcCCCchHhHHHHHHHHHHHH
Q 024572           79 YIAPEVLSRREYDGKLADVWSCGVTLYVML  108 (265)
Q Consensus        79 y~aPE~~~~~~~~~~~~DiwslG~~l~~ll  108 (265)
                         .-++....+. .++|+|+||+++..+.
T Consensus       191 ---d~~vler~y~-~~~di~~lg~~~~~~~  216 (232)
T PRK10359        191 ---DRIDLERHYG-IKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ---HHHHHHhHhc-ccccccceeEeehHHH
Confidence               1133334455 4589999999987654

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.28  E-value=4.4e-12  Score=119.37  Aligned_cols=110  Identities=24%  Similarity=0.219  Sum_probs=83.1

Q ss_pred             ccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcC-----CCCCcEEEeccCCcccCC-
Q 024572            2 QLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG-----SPAPRLKICDFGYSKSSL-   65 (265)
Q Consensus         2 e~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-----~~~~~vkl~Dfg~a~~~~-   65 (265)
                      ||... +|-|++.-.+         ++.+++.++.+||..+||||||||+|+||..     ....-++|+|||.+.-+. 
T Consensus       774 ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l  853 (974)
T KOG1166|consen  774 EYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL  853 (974)
T ss_pred             eccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence            44444 6666665332         2556788999999999999999999999932     122249999999885332 


Q ss_pred             --CCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCC
Q 024572           66 --LHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAY  112 (265)
Q Consensus        66 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~  112 (265)
                        ........++|-.+-.+|...|.+++.. +|.|.|+.+++.||.|+.
T Consensus       854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq-~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQ-IDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             cCCCcEEeeeeccccchhHHHhcCCCCchh-hhhHHHHHHHHHHHHHHH
Confidence              2333445578899999999999988655 999999999999999864

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=1.8e-12  Score=116.18  Aligned_cols=152  Identities=16%  Similarity=0.211  Sum_probs=108.4

Q ss_pred             hHHHHHhhh-hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC----------CCCcCCCCCcccccccCCc
Q 024572           21 KPDIFFSSL-SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP----------KSTVGTPAYIAPEVLSRRE   89 (265)
Q Consensus        21 i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~   89 (265)
                      ..+|+.++| +.++||++|.|++|.++.++.  +||+.|+++.........          ........|.|||++.+..
T Consensus       108 v~dgl~flh~sAk~VH~ni~p~~i~~na~~~--wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~  185 (700)
T KOG2137|consen  108 VADGLAFLHRSAKVVHGNIQPEAIVVNANGD--WKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT  185 (700)
T ss_pred             ccchhhhhccCcceeecccchhheeeccCcc--eeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence            457889999 688999999999999998876  999999998644332111          0112456799999998844


Q ss_pred             CCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 024572           90 YDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEI  168 (265)
Q Consensus        90 ~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~el  168 (265)
                      . +.++|+||+|+++|.+.. |+..+....................  ......++.++++=|.++|..++..||++..+
T Consensus       186 ~-~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~--~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l  262 (700)
T KOG2137|consen  186 N-TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGA--FGYSNNLPSELRESLKKLLNGDSAVRPTLDLL  262 (700)
T ss_pred             c-cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccc--ccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence            4 455999999999999984 5555544332222111111111111  11224688999999999999999999999999


Q ss_pred             hcCcccCCC
Q 024572          169 KSHPWFLKN  177 (265)
Q Consensus       169 l~h~~f~~~  177 (265)
                      +..+||...
T Consensus       263 ~~~~ff~D~  271 (700)
T KOG2137|consen  263 LSIPFFSDP  271 (700)
T ss_pred             hcccccCCc
Confidence            999999754

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.19  E-value=1.4e-11  Score=97.48  Aligned_cols=60  Identities=18%  Similarity=0.066  Sum_probs=45.4

Q ss_pred             Cccccc-chHHHHHH---------hccccchHHHHHhh-hhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVML---------EGSVKMKPDIFFSS-LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~---------~~~~~~i~~~l~~l-H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++++ +|......         ...+.+++.++.++ |+.||+||||||+|||++. +  .++|+|||+|..
T Consensus        96 mE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~--~v~LiDFG~a~~  166 (190)
T cd05147          96 MEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-G--KLYIIDVSQSVE  166 (190)
T ss_pred             EEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-C--cEEEEEcccccc
Confidence            788876 34333221         22356678899998 7999999999999999984 3  499999999863

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.17  E-value=4.3e-11  Score=111.71  Aligned_cols=155  Identities=31%  Similarity=0.476  Sum_probs=116.6

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC------C------------------------
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL------H------------------------   67 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~------~------------------------   67 (265)
                      +-.+.....+||+..+.|+|++|.|+++..++.  .++++||.......      .                        
T Consensus       910 i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh--~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~  987 (1205)
T KOG0606|consen  910 ILERVQSLESLHSSLRKHRDLKPDSLLIAYDGH--RPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSAD  987 (1205)
T ss_pred             hHHHHhhhhccccchhhcccccccchhhcccCC--cccCccccccccccccCcCCcccccccCccccccccccccccccc
Confidence            334455678999999999999999999987776  89999973221000      0                        


Q ss_pred             --CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-CCCCC
Q 024572           68 --SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHIS  144 (265)
Q Consensus        68 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  144 (265)
                        .......+|+-|.+||.+.+...... +|+|++|+++++.++|.+||........+..    +......+|. ....+
T Consensus       988 ~~~~~~~~~~t~~~laPe~~lg~~hgs~-ad~~~~g~~l~e~l~g~pp~na~tpq~~f~n----i~~~~~~~p~g~~~~s 1062 (1205)
T KOG0606|consen  988 EARRKHAVVGTPDYLAPEILLGRRHGSA-ADWWSSGVCLFEVLTGIPPFNAETPQQIFEN----ILNRDIPWPEGPEEGS 1062 (1205)
T ss_pred             hhhccccccCCCcccCCcccccccCCCc-chhhhhhhhhhhhhcCCCCCCCcchhhhhhc----cccCCCCCCCCccccC
Confidence              00122358999999999998776544 8999999999999999999988766554433    3333444443 33578


Q ss_pred             HHHHHHHHHhcccCCCCCCCHH---HHhcCcccCCCCC
Q 024572          145 QDCRNLLSRIFVANPSRRITIK---EIKSHPWFLKNLP  179 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~---ell~h~~f~~~~~  179 (265)
                      ..+++++.++|..+|.+|..+.   ++..|+||+..-.
T Consensus      1063 ~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1063 YEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred             hhhhhhhhhhhccCchhccCcccccccccCCccCCCCc
Confidence            8999999999999999999887   8999999986543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.17  E-value=2.8e-11  Score=95.80  Aligned_cols=45  Identities=16%  Similarity=0.070  Sum_probs=39.1

Q ss_pred             cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572           17 SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus        17 ~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ++.+++.++.++|+ +||+||||||+||+++ ++  .++|+|||+++..
T Consensus       122 i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~--~~~liDFG~a~~~  167 (190)
T cd05145         122 LYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG--KPYIIDVSQAVEL  167 (190)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC--CEEEEEcccceec
Confidence            45678899999999 9999999999999998 44  4999999998743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.15  E-value=4.5e-11  Score=98.77  Aligned_cols=149  Identities=14%  Similarity=0.201  Sum_probs=95.7

Q ss_pred             ccccchHHHHHhhhhc--CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-----CCCCCCCcCCCCCcccccccCC
Q 024572           16 GSVKMKPDIFFSSLSQ--QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-----HSRPKSTVGTPAYIAPEVLSRR   88 (265)
Q Consensus        16 ~~~~~i~~~l~~lH~~--~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-----~~~~~~~~~~~~y~aPE~~~~~   88 (265)
                      .|+.+|+.+|.|||+.  -|+|+++..+.|++..++.  +|+.--........     ........+.+.|.+||.-...
T Consensus       180 kw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngL--Ikig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~t  257 (458)
T KOG1266|consen  180 KWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGL--IKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTT  257 (458)
T ss_pred             HHHHHHHhhhhhhhccCCccccCCcchhheeecCCce--EEecccCccccchhhhhhhHhhhhccccCCccccCCcCccc
Confidence            3678899999999975  4999999999999987765  66643211100000     0011123467789999986555


Q ss_pred             cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 024572           89 EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEI  168 (265)
Q Consensus        89 ~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~el  168 (265)
                      ...+. +|||++|+...+|..+..--............+.+....   ..     ..--+.++.+||...|..||+++.+
T Consensus       258 n~~~a-~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~---le-----n~lqr~~i~kcl~~eP~~rp~ar~l  328 (458)
T KOG1266|consen  258 NTTGA-SDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG---LE-----NGLQRGSITKCLEGEPNGRPDARLL  328 (458)
T ss_pred             ccccc-hhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee---cc-----CccccCcCcccccCCCCCCcchhhh
Confidence            54444 899999999999988764322222111111112111110   00     1122578999999999999999999


Q ss_pred             hcCcccC
Q 024572          169 KSHPWFL  175 (265)
Q Consensus       169 l~h~~f~  175 (265)
                      +.||.+-
T Consensus       329 lfHpllf  335 (458)
T KOG1266|consen  329 LFHPLLF  335 (458)
T ss_pred             hcCceee
Confidence            9999754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=6e-11  Score=104.96  Aligned_cols=165  Identities=19%  Similarity=0.167  Sum_probs=117.8

Q ss_pred             cccccchHHHHHHhcc----------ccchHH----HHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            2 QLGVSSLSEFVMLEGS----------VKMKPD----IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         2 e~~~~sL~~~~~~~~~----------~~~i~~----~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      |+|+.+|..+......          +.....    ++.++|+.+|+|-|+||.||++..+.. ..+++|||+.......
T Consensus       198 E~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~-s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  198 ELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWT-SCKLTDFGLVSKISDG  276 (524)
T ss_pred             ccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccc-eeecCCcceeEEccCC
Confidence            6777777777765443          222344    888999999999999999999987732 4899999998755443


Q ss_pred             CCC------CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCC--CChHHHHHHHHHHhhhcccCCC
Q 024572           68 SRP------KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ--EDPKNFRKTISRIMAVQYKIPD  139 (265)
Q Consensus        68 ~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~  139 (265)
                      ...      ....+...|++||..++..  +.+.|+|++|.++.+..++..+....  .....++...       .+...
T Consensus       277 ~~~~~~~~~~r~~~~~~Y~~ke~~~~l~--~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-------ip~e~  347 (524)
T KOG0601|consen  277 NFSSVFKVSKRPEGDCIYAAKELLNGLA--TFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-------IPLEF  347 (524)
T ss_pred             ccccceeeeecCCCCceEeChhhhcccc--chHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-------Cchhh
Confidence            321      1125778899999997644  45589999999999999987666544  2222222111       11112


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ....+..+...+..|+..+|..|++++.+++|++...
T Consensus       348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            2245666777999999999999999999999998763

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.03  E-value=2.4e-10  Score=93.67  Aligned_cols=60  Identities=17%  Similarity=0.173  Sum_probs=48.0

Q ss_pred             Cccccc--chHHHHHHhc----cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGVS--SLSEFVMLEG----SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~--sL~~~~~~~~----~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||++.+  +|.+++....    .+.+++.++.+||++||+||||||.|||++.++.  ++|+|||.+.
T Consensus       125 ~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~--v~LIDfg~~~  190 (239)
T PRK01723        125 IERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGK--FWLIDFDRGE  190 (239)
T ss_pred             EEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCC--EEEEECCCcc
Confidence            455553  7877765322    2567889999999999999999999999987654  9999999876

>PRK10345 hypothetical protein; Provisional

Probab=99.01  E-value=3.4e-10  Score=90.66  Aligned_cols=60  Identities=18%  Similarity=0.122  Sum_probs=44.3

Q ss_pred             Ccccc---cchHHHHHHhc------cccchHHHH-HhhhhcCceecCCCcCcEEEcCC--CCCcEEEeccCC
Q 024572            1 MQLGV---SSLSEFVMLEG------SVKMKPDIF-FSSLSQQICHRDLKLENTLLDGS--PAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~---~sL~~~~~~~~------~~~~i~~~l-~~lH~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~   60 (265)
                      ||+++   ++|.+++....      .+.+++.++ .|||+++|+||||||+|||++..  +..+++|+||+.
T Consensus        84 ~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             ecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            57755   59999986432      134555555 89999999999999999999743  233699999553

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.99  E-value=3e-10  Score=90.44  Aligned_cols=61  Identities=21%  Similarity=0.169  Sum_probs=47.7

Q ss_pred             Cccccc-chHHHHH---HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVM---LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~---~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+...   ....+.+++.++.++|++||+||||||.||+++.++.  ++|+|||.+..
T Consensus       110 ~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~--~~liDfg~~~~  174 (198)
T cd05144         110 MEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK--IYIIDWPQMVS  174 (198)
T ss_pred             EEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc--EEEEECCcccc
Confidence            566655 6655533   2234667888899999999999999999999987654  99999998853

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=98.97  E-value=2.8e-10  Score=93.09  Aligned_cols=45  Identities=18%  Similarity=0.087  Sum_probs=39.7

Q ss_pred             hccccchHHHHHhhhhcC-ceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           15 EGSVKMKPDIFFSSLSQQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        15 ~~~~~~i~~~l~~lH~~~-ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++++++.++.+||++| |+||||||+||+++ .+  .++|+|||.+.
T Consensus       151 ~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~--~i~LiDFg~a~  196 (237)
T smart00090      151 FELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DG--KVVIIDVSQSV  196 (237)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CC--CEEEEEChhhh
Confidence            346788999999999999 99999999999998 44  49999999876

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.92  E-value=9.1e-10  Score=87.60  Aligned_cols=60  Identities=20%  Similarity=0.243  Sum_probs=50.5

Q ss_pred             Cccccc-chHHHHHHh--ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLE--GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++...  ..+.+++.++.++|+.|++|||++|.||+++ ++  .++++|||.++.
T Consensus        76 ~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~--~~~liDfg~a~~  138 (199)
T TIGR03724        76 MEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DD--KLYLIDFGLGKY  138 (199)
T ss_pred             EEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CC--cEEEEECCCCcC
Confidence            677755 898887664  4678889999999999999999999999998 43  499999998763

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.87  E-value=1.2e-09  Score=99.89  Aligned_cols=60  Identities=25%  Similarity=0.285  Sum_probs=50.2

Q ss_pred             Cccccc-chHHHHH-HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVM-LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~-~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++. ...++.+++.++.+||++||+||||||+|||++ ++  .++|+|||+++.
T Consensus       415 ~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~--~~~liDFGla~~  476 (535)
T PRK09605        415 MEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DD--RLYLIDFGLGKY  476 (535)
T ss_pred             EEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CC--cEEEEeCccccc
Confidence            678766 8998874 344677899999999999999999999999994 33  499999999863

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.87  E-value=6.6e-09  Score=89.07  Aligned_cols=154  Identities=14%  Similarity=0.153  Sum_probs=103.0

Q ss_pred             HHHHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccC---
Q 024572           11 FVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR---   87 (265)
Q Consensus        11 ~~~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~---   87 (265)
                      |-..-...+-++.++.-||..|.+-+|++++|+|+.+.+.  |.|.|-..-............+|...|++||.-.-   
T Consensus       116 w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~--V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf  193 (637)
T COG4248         116 WDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSK--VVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSF  193 (637)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCce--EEEEcccceeeccCCceEecccCccccCCHHHhccccc
Confidence            3333334566888999999999999999999999987776  88887654433334444455679999999998642   


Q ss_pred             --CcCCCchHhHHHHHHHHHHHHhC-CCCCCCCCCh----HHHH-HHHHH------Hhhhcc----cCCCCCCCCHHHHH
Q 024572           88 --REYDGKLADVWSCGVTLYVMLVG-AYPFEDQEDP----KNFR-KTISR------IMAVQY----KIPDYVHISQDCRN  149 (265)
Q Consensus        88 --~~~~~~~~DiwslG~~l~~ll~g-~~pf~~~~~~----~~~~-~~~~~------~~~~~~----~~~~~~~~~~~~~~  149 (265)
                        ..-+.. .|.|.||+++++++.| ++||.+....    ..+. .+...      .....+    ..+.+..+++++..
T Consensus       194 ~g~~r~~~-hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqA  272 (637)
T COG4248         194 VGFERTAN-HDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQA  272 (637)
T ss_pred             cccCCCcc-ccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHH
Confidence              222223 7999999999999986 9999764211    1111 11000      001111    11234457899999


Q ss_pred             HHHHhccc--CCCCCCCHHH
Q 024572          150 LLSRIFVA--NPSRRITIKE  167 (265)
Q Consensus       150 li~~~L~~--dP~~R~s~~e  167 (265)
                      |..+|+..  ++.-|||++.
T Consensus       273 lF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         273 LFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             HHHHHhcccCCCCCCCCHHH
Confidence            99999965  4668998754

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.87  E-value=1.9e-09  Score=86.47  Aligned_cols=60  Identities=20%  Similarity=0.227  Sum_probs=49.4

Q ss_pred             Cccccc-chHHHHHH-----hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVML-----EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~-----~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++..     ...+.++..++.++|++|++|||++|.|||++ ++  .++|+|||.++.
T Consensus        78 ~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~--~~~liDf~~a~~  143 (211)
T PRK14879         78 MEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GG--KIYLIDFGLAEF  143 (211)
T ss_pred             EEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CC--CEEEEECCcccC
Confidence            677755 89888764     24567788889999999999999999999998 33  499999998763

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.80  E-value=4.1e-09  Score=82.90  Aligned_cols=47  Identities=19%  Similarity=0.165  Sum_probs=40.1

Q ss_pred             HhccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572           14 LEGSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus        14 ~~~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      .+..+.+++.++.++|+ +||+||||||+||+++ ++  .++|+|||.+..
T Consensus       116 ~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~--~~~liDfg~a~~  163 (187)
T cd05119         116 PEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG--KVYIIDVPQAVE  163 (187)
T ss_pred             HHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC--cEEEEECccccc
Confidence            34457778899999999 9999999999999998 44  499999998863

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.70  E-value=1.5e-08  Score=78.02  Aligned_cols=59  Identities=20%  Similarity=0.244  Sum_probs=48.8

Q ss_pred             Cccccc-chHHHHHHh--ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVMLE--GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||+.++ .|.|++...  ..++-+=..+.-||..||||+||.++||++.+..   +.++|||++.
T Consensus        78 me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~---i~~IDfGLg~  139 (204)
T COG3642          78 MEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR---IYFIDFGLGE  139 (204)
T ss_pred             EEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc---EEEEECCccc
Confidence            778777 788888877  4455556667889999999999999999997654   8999999876

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.53  E-value=4.4e-08  Score=77.29  Aligned_cols=44  Identities=16%  Similarity=0.098  Sum_probs=36.1

Q ss_pred             cccchHHHHHhh-hhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572           17 SVKMKPDIFFSS-LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus        17 ~~~~i~~~l~~l-H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      .+.+++.++..+ |..|||||||++.||++..+   .+.|+|||.+..
T Consensus       129 i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~~---~v~iIDF~qav~  173 (197)
T cd05146         129 AYYQVLSMMKQLYKECNLVHADLSEYNMLWHDG---KVWFIDVSQSVE  173 (197)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEECC---cEEEEECCCcee
Confidence            355677778777 89999999999999999743   399999997753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.49  E-value=4.2e-08  Score=87.18  Aligned_cols=145  Identities=19%  Similarity=0.145  Sum_probs=97.7

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCc--ccccccCCcCCCchH
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI--APEVLSRREYDGKLA   95 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~~~   95 (265)
                      ..+++.++.++|++.++|+|+||+||++..++ ...++.|||.......  ......+..++.  ++.......+ ..+.
T Consensus       372 ~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-~~~~~~~~~~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~~-~~~~  447 (524)
T KOG0601|consen  372 TAQILTALNVIHSKLFVHLDVKPSNILISNDG-FFSKLGDFGCWTRLAF--SSGVFHHIDRLYPIAEILLEDYPH-LSKA  447 (524)
T ss_pred             HHHHHhccccccchhhhcccccccceeeccch-hhhhccccccccccce--ecccccccccccccchhhcccccc-cccc
Confidence            45567778899999999999999999998764 3479999998764211  112223344444  4444444444 4458


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572           96 DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus        96 DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      |++|||..+.+.+++...-.......   .    +...  ..+........+..+.+.++..++..|+.+.++..|.-|.
T Consensus       448 ~~~sl~~~~~e~~~~~~ls~~~~~~~---~----i~~~--~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  448 DIFSLGLSVDEAITGSPLSESGVQSL---T----IRSG--DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             ccccccccccccccCcccCcccccce---e----eecc--cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            99999999999998865433322111   1    1111  1233333447788899999999999999999998887653

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.42  E-value=2.7e-07  Score=76.65  Aligned_cols=62  Identities=18%  Similarity=0.152  Sum_probs=47.5

Q ss_pred             Cccccc--chHHHHH-----------HhccccchHHHHHhhhhcCceecCCCcCcEEEcC-----CCCCcEEEeccCCcc
Q 024572            1 MQLGVS--SLSEFVM-----------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDG-----SPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~--sL~~~~~-----------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-----~~~~~vkl~Dfg~a~   62 (265)
                      ||..++  +|.+++.           .+.++++++..+..||..||+|+|+++.|||++.     .+...+.|+||+.++
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            454444  6888764           2245667888899999999999999999999975     234469999999764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.41  E-value=2.2e-07  Score=82.73  Aligned_cols=62  Identities=21%  Similarity=0.232  Sum_probs=46.4

Q ss_pred             Cccccc-chHHHHHHh--c-----cccchHH-HHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLE--G-----SVKMKPD-IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--~-----~~~~i~~-~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ +|.++....  +     +...++. .+..+|..|++|+|+||.||+++.++.  ++++|||++...
T Consensus       237 mE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~--i~liDfG~~~~l  307 (437)
T TIGR01982       237 MEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGK--IIALDFGIVGRL  307 (437)
T ss_pred             EEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCc--EEEEeCCCeeEC
Confidence            788876 888876532  1     1222233 356789999999999999999987765  999999988643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.36  E-value=2.2e-06  Score=77.57  Aligned_cols=90  Identities=13%  Similarity=0.145  Sum_probs=66.2

Q ss_pred             ccccchHHHHHhhh-hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-CCCCcCCCCCcccccccCCcCCCc
Q 024572           16 GSVKMKPDIFFSSL-SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        16 ~~~~~i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ..+.||+.+|.+|| .++++|++|.-+.|+++..|.  .||++|.++........ .......-.|..|+.+....+   
T Consensus       108 ~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge--WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~---  182 (690)
T KOG1243|consen  108 LGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE--WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEW---  182 (690)
T ss_pred             HHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc--EEEeeeEEEeccccCCcccccchhhhcccChhhcCcccc---
Confidence            34778999999997 889999999999999998887  99999988754332221 112222334667766543332   


Q ss_pred             hHhHHHHHHHHHHHHhC
Q 024572           94 LADVWSCGVTLYVMLVG  110 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~g  110 (265)
                      ..|.|-|||++++++.|
T Consensus       183 s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  183 SIDSWGLGCLIEELFNG  199 (690)
T ss_pred             chhhhhHHHHHHHHhCc
Confidence            26999999999999998

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.36  E-value=2.6e-07  Score=69.29  Aligned_cols=47  Identities=26%  Similarity=0.388  Sum_probs=38.6

Q ss_pred             HhccccchHHHHHhhhh---cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           14 LEGSVKMKPDIFFSSLS---QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        14 ~~~~~~~i~~~l~~lH~---~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ......+++.++.++|.   .+++|+||+|.||+++..+  .++++|||.+.
T Consensus        88 ~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~--~~~l~Df~~~~  137 (155)
T cd05120          88 KEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK--ILGIIDWEYAG  137 (155)
T ss_pred             HHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc--EEEEEeccccc
Confidence            34456778888999997   4799999999999998744  49999999775

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.36  E-value=6e-07  Score=69.14  Aligned_cols=63  Identities=21%  Similarity=0.272  Sum_probs=49.6

Q ss_pred             Cccccc--chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCC-cEEEeccCCccc
Q 024572            1 MQLGVS--SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAP-RLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~--sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~-~vkl~Dfg~a~~   63 (265)
                      ||+..+  ++.+|+....           ..+.|=+.+.-||..+|+||||..+||++...+.. .+.++|||++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            788877  8889888653           34556667888999999999999999999665432 358999998763

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.31  E-value=3.3e-07  Score=70.75  Aligned_cols=43  Identities=30%  Similarity=0.470  Sum_probs=36.7

Q ss_pred             cccchHHHHHhhhhcCc-----eecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           17 SVKMKPDIFFSSLSQQI-----CHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~i-----vH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .+.+++.++..||+.++     +|||++|.||+++ ++  .++++|||.+.
T Consensus        88 ~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~--~~~liDf~~a~  135 (170)
T cd05151          88 NLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DG--RLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CC--eEEEEeccccc
Confidence            45678899999999985     9999999999998 33  39999999765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.27  E-value=7.5e-07  Score=71.35  Aligned_cols=56  Identities=18%  Similarity=0.248  Sum_probs=46.4

Q ss_pred             chHHHHHH---------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcc
Q 024572            7 SLSEFVML---------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSK   62 (265)
Q Consensus         7 sL~~~~~~---------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~   62 (265)
                      +|.+++..         ..+++++...+.-||.+||+|+|+++.|||++... ...+.|+||+.++
T Consensus       104 ~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~  169 (206)
T PF06293_consen  104 DLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR  169 (206)
T ss_pred             cHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence            67777764         44577788889999999999999999999998765 3358999999765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.24  E-value=8.8e-07  Score=69.62  Aligned_cols=60  Identities=23%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             Ccccc--c-chHHHHHHh-------ccccchHH-HHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGV--S-SLSEFVMLE-------GSVKMKPD-IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~--~-sL~~~~~~~-------~~~~~i~~-~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||+.+  + .+..+....       ..+..++. ....+|+.||+||||++.||+++.+ .  +.++|||.+..
T Consensus        85 ME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~--~~iIDf~qav~  155 (188)
T PF01163_consen   85 MEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-K--VYIIDFGQAVD  155 (188)
T ss_dssp             EE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-C--EEE--GTTEEE
T ss_pred             EEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-e--EEEEecCccee
Confidence            67777  4 344433332       23444455 3445789999999999999999876 3  99999997753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.07  E-value=2.3e-06  Score=68.27  Aligned_cols=59  Identities=14%  Similarity=0.117  Sum_probs=45.6

Q ss_pred             Cccccc-chHHHHHHhc-cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVMLEG-SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||+.++ .|.++..... ....+.+.+.-+|+.|++|+|.+|.|+++..++   ++++||+..+
T Consensus       122 ~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~---i~iID~~~k~  182 (229)
T PF06176_consen  122 MEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG---IRIIDTQGKR  182 (229)
T ss_pred             EEEecCeecccchhcCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc---EEEEECcccc
Confidence            677777 6766544322 235677889999999999999999999998654   8999998544

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.92  E-value=8.8e-06  Score=73.87  Aligned_cols=64  Identities=25%  Similarity=0.412  Sum_probs=44.7

Q ss_pred             Cccccc-chHHHHHH--hcc-ccchH----H-HHHhhhhcCceecCCCcCcEEEcCCC--CCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVML--EGS-VKMKP----D-IFFSSLSQQICHRDLKLENTLLDGSP--APRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~--~~~-~~~i~----~-~l~~lH~~~ivH~dlkp~NIll~~~~--~~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ .+.++...  .+. .+.++    . .+..++..|++|+|+||.||+++.++  .++++++|||++...
T Consensus       240 mE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        240 MERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             EeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            788887 88875432  221 11222    2 24456789999999999999998765  235999999998644

>PRK09902 hypothetical protein; Provisional

Probab=97.74  E-value=3.4e-05  Score=61.39  Aligned_cols=56  Identities=13%  Similarity=0.074  Sum_probs=45.4

Q ss_pred             chHHHHHH-----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            7 SLSEFVML-----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         7 sL~~~~~~-----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +|.+++..           +.+++.++.++.-||..|+.|+|+.+.||+++..+...++++||.-++
T Consensus       112 ~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        112 SIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             cHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            67777643           345777888899999999999999999999986554459999998654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.26  E-value=0.00023  Score=58.50  Aligned_cols=43  Identities=16%  Similarity=0.159  Sum_probs=34.4

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +..|+.-+..+-..||||+|+++-||+++.++.  +.++||--+.
T Consensus       208 l~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~--~~vIDwPQ~v  250 (304)
T COG0478         208 LDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD--IVVIDWPQAV  250 (304)
T ss_pred             HHHHHHHHHHHHHcCccccCCchheEEEecCCC--EEEEeCcccc
Confidence            445555555566999999999999999998876  9999996543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.18  E-value=0.00067  Score=65.67  Aligned_cols=144  Identities=19%  Similarity=0.199  Sum_probs=93.7

Q ss_pred             hccccchHHHHHhhhhcCceecCCCcC---cEEEcCCCCCcEEEe--ccCCcccCCCCCCCCCCcCCCCCcccccccCCc
Q 024572           15 EGSVKMKPDIFFSSLSQQICHRDLKLE---NTLLDGSPAPRLKIC--DFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE   89 (265)
Q Consensus        15 ~~~~~~i~~~l~~lH~~~ivH~dlkp~---NIll~~~~~~~vkl~--Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~   89 (265)
                      +.+..+++.++.++|+....|.-|..+   +.-++..+.  +.++  ||+.++................+.++|......
T Consensus       289 r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~--~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~  366 (1351)
T KOG1035|consen  289 RILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGV--VAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENT  366 (1351)
T ss_pred             HHHHHHHhhhHHHHHHhccceeEEecccccccccCccce--eecchhhhcccccCCCcccchhhcCcccccccccccccc
Confidence            334566788999999997666655554   222233333  5555  888877655554444555666778888876655


Q ss_pred             CCC-chHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 024572           90 YDG-KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEI  168 (265)
Q Consensus        90 ~~~-~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~el  168 (265)
                      ... ...|+|.+|.+...+..|..+-.....       ...+...        .......+++.+|+.-++++|+++.++
T Consensus       367 ~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~-------~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~l  431 (1351)
T KOG1035|consen  367 AKKSRLTDLWCLGLLLLQLSQGEDISEKSAV-------PVSLLDV--------LSTSELLDALPKCLDEDSEERLSALEL  431 (1351)
T ss_pred             chhhhhhHHHHHHHHHhhhhhcCcccccccc-------hhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhh
Confidence            432 236999999999999887654322111       1111000        111156788999999999999999999


Q ss_pred             hcCcccC
Q 024572          169 KSHPWFL  175 (265)
Q Consensus       169 l~h~~f~  175 (265)
                      +.|+|.+
T Consensus       432 l~~~f~~  438 (1351)
T KOG1035|consen  432 LTHPFLR  438 (1351)
T ss_pred             hhchhcc
Confidence            9999965

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.92  E-value=0.0061  Score=54.51  Aligned_cols=123  Identities=19%  Similarity=0.269  Sum_probs=83.0

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhH
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADV   97 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di   97 (265)
                      +-|+..+|.++|+.|+..+-|.|.+||++++.  +++|...|+........           .  +.+.+    .++-|.
T Consensus       399 ~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~--RIriS~C~i~Dvl~~d~-----------~--~~le~----~Qq~D~  459 (655)
T KOG3741|consen  399 ISQLTAALYSIHSSGLACKTLDLKKILVTGKM--RIRISGCGIMDVLQEDP-----------T--EPLES----QQQNDL  459 (655)
T ss_pred             HHHHHHHHHHHHhcCceeecccHhHeEeeCcc--eEEEecccceeeecCCC-----------C--cchhH----HhhhhH
Confidence            56789999999999999999999999998765  48888777654322221           0  11222    123688


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           98 WSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        98 wslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      =.||.+++.|.||..--.........  .+..+.         ..++.+++++|.-+...+++. -++.+++.+
T Consensus       460 ~~lG~ll~aLAt~~~ns~~~d~~~~s--~~~~I~---------~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  460 RDLGLLLLALATGTENSNRTDSTQSS--HLTRIT---------TTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HHHHHHHHHHhhcccccccccchHHH--HHHHhh---------hhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            89999999999995431111111111  011111         146789999999999888887 688888765

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.37  E-value=0.0024  Score=51.94  Aligned_cols=46  Identities=20%  Similarity=0.132  Sum_probs=35.8

Q ss_pred             HhccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           14 LEGSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        14 ~~~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+..+++++.+.-|-. .++||+||+.-|||+.. +.  +.++|||-|.
T Consensus       168 ~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~-~~--p~iID~~QaV  214 (268)
T COG1718         168 AEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHD-GE--PYIIDVSQAV  214 (268)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccchhhheEEEC-Ce--EEEEECcccc
Confidence            34456666777666655 99999999999999983 33  8999999765

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.33  E-value=0.0031  Score=56.48  Aligned_cols=83  Identities=14%  Similarity=0.154  Sum_probs=53.8

Q ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 024572           94 LADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI-------PDYVHISQDCRNLLSRIFVANPSRRITIK  166 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~s~~  166 (265)
                      ++|||++|.++.++..|...+...........+ ..........       -....++.....+..+|+...|..||...
T Consensus       111 KsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i-~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  111 KSDVWSLGFIILELYLGISLEAELTESEYLEIL-LKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             chhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            599999999999999987766543322221111 1110000000       00113566778899999999999999999


Q ss_pred             HHhcCcccCCC
Q 024572          167 EIKSHPWFLKN  177 (265)
Q Consensus       167 ell~h~~f~~~  177 (265)
                      ++.+++-|...
T Consensus       190 ~~~k~~i~~ev  200 (725)
T KOG1093|consen  190 ELSKRCSFTEV  200 (725)
T ss_pred             HHhcCccHHHH
Confidence            99999887644

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.76  E-value=0.0023  Score=63.95  Aligned_cols=135  Identities=13%  Similarity=0.068  Sum_probs=85.9

Q ss_pred             ceecCCCcCcEEEcCCCCCcEEEeccCCccc-CCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCC
Q 024572           33 ICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA  111 (265)
Q Consensus        33 ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~  111 (265)
                      .+|++||+-|.+|..+..  +|++++|+.+. ...........+++.|+.|++...-.+..+ +|+|..|+.+|....|.
T Consensus      1361 ~v~~~Lkf~lpmIVtny~--v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~r-sdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNYN--VKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKR-SDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred             chhhhhhhhccceecCCc--ccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHhccc
Confidence            789999999999988776  99999999882 222223344567888999998877776544 99999999999998777


Q ss_pred             CCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          112 YPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       112 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      .+|...     ....++.+.............|.+.-.....+|-..-..||.-...+.-+.|-
T Consensus      1438 ~~fi~f-----lq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1438 AYFIFF-----LQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFA 1496 (2724)
T ss_pred             HHHHHH-----HHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhccccccc
Confidence            665221     11111111111111111112234444455555555667888887777766653

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.75  E-value=0.011  Score=53.61  Aligned_cols=62  Identities=19%  Similarity=0.229  Sum_probs=44.0

Q ss_pred             Cccccc-chHHHHHHhc--c-ccchHHH-----HHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLEG--S-VKMKPDI-----FFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--~-~~~i~~~-----l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||+..+ .+.+......  . .+.|+..     +..+-..|++|.|.+|-||+++.++.  +.+.|||+....
T Consensus       245 mE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~--i~~lDfGi~g~l  315 (517)
T COG0661         245 MEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGR--IVLLDFGIVGRL  315 (517)
T ss_pred             EEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCc--EEEEcCcceecC
Confidence            677777 6777743332  2 1233332     34455799999999999999998865  999999987644

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.72  E-value=0.0078  Score=48.11  Aligned_cols=33  Identities=18%  Similarity=0.352  Sum_probs=26.5

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ...++|+|++|.||+++.+....+.|+||+.+.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            578999999999999987422237899999765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.64  E-value=0.0054  Score=56.19  Aligned_cols=145  Identities=21%  Similarity=0.189  Sum_probs=95.1

Q ss_pred             ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhH
Q 024572           18 VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADV   97 (265)
Q Consensus        18 ~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di   97 (265)
                      ++.-+..+.++|+-.=+|+|    ||+..+..   .+..+|+............+..+++.++|||+.....+... .|.
T Consensus       342 ~r~et~~l~~l~~~~~~~~d----~~l~s~~~---~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~-p~~  413 (829)
T KOG0576|consen  342 LRKETRPLAELHSSYKVHRD----NILGSEEE---VKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGC-PDS  413 (829)
T ss_pred             hhhhcccccccccccccCcc----cccccccc---cccccccCCcccCcccccccCCCCCCCCCchhhcccccccC-CCc
Confidence            44456678899988778998    88876543   79999998876555445667789999999999988888766 799


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--ccCCCCCCCCHHHH-HHHHHhcccCCCCCCCHHHHhcCccc
Q 024572           98 WSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--YKIPDYVHISQDCR-NLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus        98 wslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      |++|.--.++.-|-+|-.....  .    ...+....  .........+.... ++...|+..-|..|+..-.++-|.+|
T Consensus       414 ~~~~~~~~~~ap~~pPr~~P~~--~----~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvf  487 (829)
T KOG0576|consen  414 GSLAVSAIQMAPGLPPRSSPPA--V----LPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVF  487 (829)
T ss_pred             cCCCcchhhcCCCCCCCCCCcc--c----cCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHh
Confidence            9999877777666665433100  0    00000000  00000000111112 46778888899999999999888888


Q ss_pred             CC
Q 024572          175 LK  176 (265)
Q Consensus       175 ~~  176 (265)
                      ..
T Consensus       488 ng  489 (829)
T KOG0576|consen  488 NG  489 (829)
T ss_pred             cc
Confidence            64

>PRK05231 homoserine kinase; Provisional

Probab=95.55  E-value=0.01  Score=50.74  Aligned_cols=31  Identities=26%  Similarity=0.426  Sum_probs=25.2

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..|+||+|++|.||+++.+..  .-|+||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~~~--~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRL--SGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECCce--EEEEeccccc
Confidence            458999999999999985542  4799999764

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.38  E-value=0.02  Score=48.76  Aligned_cols=31  Identities=29%  Similarity=0.497  Sum_probs=26.2

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+++.||+++.++.  +.|+||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~--~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSV--KGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCce--EEEeeccccc
Confidence            478999999999999987653  6899999654

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.26  E-value=0.015  Score=47.38  Aligned_cols=31  Identities=26%  Similarity=0.303  Sum_probs=24.8

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+.+.||+++....  .-|+||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i--~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRL--SAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCE--EEEEeCcccC
Confidence            456999999999999986532  4699999764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=95.19  E-value=0.043  Score=43.55  Aligned_cols=54  Identities=22%  Similarity=0.317  Sum_probs=39.1

Q ss_pred             cchHHHHHHhccccchHH----HHHhhhhcCceecCCCcCcEEEcCCCCC--cEEEec-cC
Q 024572            6 SSLSEFVMLEGSVKMKPD----IFFSSLSQQICHRDLKLENTLLDGSPAP--RLKICD-FG   59 (265)
Q Consensus         6 ~sL~~~~~~~~~~~~i~~----~l~~lH~~~ivH~dlkp~NIll~~~~~~--~vkl~D-fg   59 (265)
                      .+|.+++........+..    ...||-..+|+.+||+|.||++.....+  .+.|+| ||
T Consensus       108 ~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G  168 (199)
T PF10707_consen  108 PTLEDYLKEGGLTEELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLG  168 (199)
T ss_pred             ccHHHHHHcCCccHHHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCC
Confidence            488999976555443333    3568999999999999999999654433  477777 44

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=94.88  E-value=0.029  Score=47.26  Aligned_cols=30  Identities=30%  Similarity=0.485  Sum_probs=25.1

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .+++|+|+.|.||+++.++.  +.|+||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~--~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDEL--SGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCce--EEEeehhhhc
Confidence            57999999999999987543  5799998654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=94.79  E-value=0.054  Score=49.36  Aligned_cols=64  Identities=13%  Similarity=0.108  Sum_probs=43.0

Q ss_pred             Cccccc-chH--HHHHHhccccc-----hHHH-HHhhhhcCceecCCCcCcEEEcCC--CCCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLS--EFVMLEGSVKM-----KPDI-FFSSLSQQICHRDLKLENTLLDGS--PAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~--~~~~~~~~~~~-----i~~~-l~~lH~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ .+.  +.+..+++-..     +..+ ..-+-..|++|+|-+|-||++..+  +...+.+.|||+....
T Consensus       281 ME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  281 MEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI  355 (538)
T ss_pred             EEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence            888888 333  44555554222     2222 223557899999999999999853  3456999999987643

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.66  E-value=0.016  Score=46.51  Aligned_cols=31  Identities=32%  Similarity=0.453  Sum_probs=20.5

Q ss_pred             hcCceecCCCcCcEEEc-CCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLD-GSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~   62 (265)
                      ...++|+|+.|.||+++ .++  ++.|+||+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~--~i~iID~e~a~  196 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDG--RIGIIDFEDAG  196 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTT--EEEE--GTT-E
T ss_pred             CcEEEEeccccccceeeeccc--eeEEEecccce
Confidence            57799999999999998 333  36799998653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=94.64  E-value=0.027  Score=47.72  Aligned_cols=31  Identities=35%  Similarity=0.578  Sum_probs=25.7

Q ss_pred             hcCceecCCCcCcEEEcCC----CCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGS----PAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~----~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+.|.||+++.+    +.  ++++||..|.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~--i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKK--LVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCc--EEEEeeCCCC
Confidence            3578999999999999864    43  9999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.60  E-value=0.029  Score=45.59  Aligned_cols=31  Identities=26%  Similarity=0.513  Sum_probs=25.6

Q ss_pred             hcCceecCCCcCcEEEcC-CCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+.+.|||++. ++  .+.|+||..|.
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~--~~~lIDwe~a~  200 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKN--SVKFIDYEYAG  200 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCC--CEEEEEcccCC
Confidence            357999999999999986 34  39999998764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.38  E-value=0.04  Score=43.23  Aligned_cols=28  Identities=25%  Similarity=0.392  Sum_probs=24.1

Q ss_pred             CceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           32 QICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        32 ~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      -.+|+|+.|.||++.+++   ++|+||+.+.
T Consensus        78 ~p~H~D~~~~N~~~~~~~---~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG---LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECCC---EEEEeCCccc
Confidence            469999999999997654   8999999775

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.22  E-value=0.046  Score=43.28  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=26.5

Q ss_pred             hhcCceecCCCcCcEEEcCCCCC---cEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAP---RLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~---~vkl~Dfg~a~   62 (265)
                      +...++|||+.+.||++..++.+   .+.++||..++
T Consensus       118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             CceEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            35679999999999999754322   48999998764

subfamily of choline kinases

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=93.91  E-value=0.046  Score=44.67  Aligned_cols=31  Identities=23%  Similarity=0.245  Sum_probs=25.5

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ...++|+|+.|.|||++....  +.|+||+.+.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~--~~iIDwe~a~  192 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKF--SGFIDLGRLG  192 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcE--EEEEEccccc
Confidence            456999999999999987543  6899998653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.84  E-value=0.051  Score=46.11  Aligned_cols=30  Identities=30%  Similarity=0.620  Sum_probs=24.9

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|||+.+.||+++. +.  +.|+||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~--i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NE--VYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEeC-Cc--EEEEECcccc
Confidence            468999999999999986 33  8999998553

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=93.81  E-value=0.035  Score=47.30  Aligned_cols=40  Identities=13%  Similarity=0.175  Sum_probs=32.5

Q ss_pred             hHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           21 KPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        21 i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...+--|-.+|+||+|..--||+++.+..  ++++||--+.
T Consensus       211 lm~~Iv~la~~GlIHgDFNEFNimv~dd~~--i~vIDFPQmv  250 (465)
T KOG2268|consen  211 LMGLIVRLANHGLIHGDFNEFNIMVKDDDK--IVVIDFPQMV  250 (465)
T ss_pred             HHHHHHHHHHcCceecccchheeEEecCCC--EEEeechHhh
Confidence            344555688999999999999999987665  9999997543

>TIGR02721 ycfN_thiK thiamine kinase

Probab=93.73  E-value=0.055  Score=44.66  Aligned_cols=29  Identities=24%  Similarity=0.347  Sum_probs=24.8

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|+.|.||+++.++   +.|+||..+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~---~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG---LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC---CEEEeccccC
Confidence            3689999999999998755   7899998764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.30  E-value=0.068  Score=43.39  Aligned_cols=29  Identities=21%  Similarity=0.263  Sum_probs=24.3

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|+.|.||+++..+   +.++||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~~---~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG---TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCCC---cEEEechhcC
Confidence            4578999999999997654   7899999764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.21  E-value=0.11  Score=43.30  Aligned_cols=29  Identities=34%  Similarity=0.546  Sum_probs=25.2

Q ss_pred             CceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           32 QICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        32 ~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      -++|+|+.|.|++.++.+.  ++|+||..|.
T Consensus       154 v~cH~Dl~~~N~l~t~~~~--l~LIDWEyAg  182 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGG--LFLIDWEYAG  182 (269)
T ss_pred             eeecCCCCccceEEcCCCc--EEEEecccCC
Confidence            6999999999999987554  9999998664

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.19  E-value=0.069  Score=42.69  Aligned_cols=30  Identities=33%  Similarity=0.639  Sum_probs=19.3

Q ss_pred             cCceecCCCcCcEEE-cCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLL-DGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll-~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+||.|.||++ +.++.  ++|+||..|.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~--~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGE--VKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSC--EEE--GTT-E
T ss_pred             ceEeeccCccccEEeccCCCe--EEEecHHHHh
Confidence            579999999999999 44444  9999998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=92.91  E-value=0.069  Score=45.75  Aligned_cols=34  Identities=32%  Similarity=0.415  Sum_probs=24.9

Q ss_pred             hcCceecCCCcCcEEEcCCCC----------------CcEEEeccCCccc
Q 024572           30 SQQICHRDLKLENTLLDGSPA----------------PRLKICDFGYSKS   63 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~----------------~~vkl~Dfg~a~~   63 (265)
                      -...+|-||||+|||+-++..                .+++|.||.+++.
T Consensus       297 c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv  346 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQV  346 (434)
T ss_pred             cceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHh
Confidence            457999999999999954332                1356778887763

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.87  E-value=0.089  Score=44.91  Aligned_cols=20  Identities=35%  Similarity=0.411  Sum_probs=16.4

Q ss_pred             hcCceecCCCcCcEEEcCCC
Q 024572           30 SQQICHRDLKLENTLLDGSP   49 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~   49 (265)
                      -...+|-||||+|||+-++.
T Consensus       301 c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        301 CDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             cceeeeccCCCCcEEEecCC
Confidence            45799999999999995443

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=92.83  E-value=0.097  Score=44.99  Aligned_cols=34  Identities=26%  Similarity=0.299  Sum_probs=26.6

Q ss_pred             hhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           28 SLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        28 lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +.+.+  +||+|+.|.||+++.... -+.++||+-|.
T Consensus       192 lp~~~~~iIH~D~~~~NVl~d~~~~-~~g~iDFdDa~  227 (331)
T COG2334         192 LPALGDQIIHGDLHPDNVLFDDDTD-VSGFIDFDDAG  227 (331)
T ss_pred             CCcccceeeecCCCccceeEcCCCC-eeeEEEccccc
Confidence            34445  999999999999987653 27899999654

>PRK06148 hypothetical protein; Provisional

Probab=92.82  E-value=0.095  Score=51.98  Aligned_cols=33  Identities=30%  Similarity=0.476  Sum_probs=26.5

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEE-EeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLK-ICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vk-l~Dfg~a~   62 (265)
                      .+++||+|+.+.|||++.+...++. |+|||-+.
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            4679999999999999876522355 99999765

>PLN02236 choline kinase

Probab=92.82  E-value=0.091  Score=45.54  Aligned_cols=33  Identities=27%  Similarity=0.598  Sum_probs=26.3

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...++|+|+++.||+++... ..+.++||..+.
T Consensus       198 ~~~~~cH~Dl~~~Nil~~~~~-~~~~lID~Eya~  230 (344)
T PLN02236        198 QEIGFCHNDLQYGNIMIDEET-RAITIIDYEYAS  230 (344)
T ss_pred             CCceEEeCCCCcCcEEEeCCC-CcEEEEeehhcc
Confidence            345799999999999997532 249999998764

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=92.50  E-value=0.076  Score=45.22  Aligned_cols=30  Identities=20%  Similarity=0.268  Sum_probs=25.8

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .+++|+|+.++|||+++++.  +.++||..+.
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~--~~iIDfd~~~  225 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRG--GYFINFEKAS  225 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCC--EEEEEhhhcc
Confidence            47999999999999987765  8999998664

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=92.50  E-value=0.094  Score=43.97  Aligned_cols=32  Identities=22%  Similarity=0.313  Sum_probs=25.0

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ...++|+|++|.||+++.++. ..-|+||+.+.
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~-~~gviDWe~a~  215 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDAR-VTGLIDWTEAK  215 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCC-EEEEECcHhcc
Confidence            456999999999999986432 24699999764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.36  E-value=0.21  Score=42.71  Aligned_cols=32  Identities=16%  Similarity=0.289  Sum_probs=27.4

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ...++|+|+++.||+++....  +-+.||+.+..
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~--~gVlDwe~~~l  228 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRP--TGVLDWELATL  228 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCe--eEEEecccccc
Confidence            456899999999999987765  88999998763

>PRK11768 serine/threonine protein kinase; Provisional

Probab=91.00  E-value=0.15  Score=43.80  Aligned_cols=29  Identities=17%  Similarity=0.148  Sum_probs=23.9

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++||+|+.+.|||++ + .  +.|+||+-+.
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~--~~iIDFDd~~  223 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-G--PHFVDLDDAR  223 (325)
T ss_pred             CccceecCCCchhcccc-C-C--cEEEeCCCCC
Confidence            46799999999999995 3 2  7899999654

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=90.87  E-value=0.21  Score=44.09  Aligned_cols=31  Identities=16%  Similarity=0.259  Sum_probs=26.1

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...++|||+.+.||++..+.   ++++||-++.
T Consensus       221 ~~~~l~HgDl~~gni~~~~~~---~~viD~E~a~  251 (401)
T PRK09550        221 KAEALLHGDLHTGSIFVTEEE---TKVIDPEFAF  251 (401)
T ss_pred             CCCceeeccCCcccEEeeCCC---cEEEeccccc
Confidence            467799999999999997653   8999998664

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=90.74  E-value=0.17  Score=42.56  Aligned_cols=32  Identities=22%  Similarity=0.427  Sum_probs=25.2

Q ss_pred             cCceecCCCcCcEEEcCCCCC---cEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAP---RLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~---~vkl~Dfg~a~   62 (265)
                      +-|+|||+++.|||+..++.+   .+++.||-.++
T Consensus       215 ~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  215 NVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             eEEEcCccCHHhEeEccccccccccceeecccccc
Confidence            449999999999999665432   58999997654

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK12396 5-methylribose kinase; Reviewed

Probab=90.29  E-value=0.22  Score=43.88  Aligned_cols=31  Identities=19%  Similarity=0.302  Sum_probs=26.4

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...++||||+|.||+++.++   +|++|..++.
T Consensus       225 ~~~aLlHGDlHtGSI~v~~~~---~kvIDpEFAf  255 (409)
T PRK12396        225 NAQALIHGDLHTGSVFVKNDS---TKVIDPEFAF  255 (409)
T ss_pred             cchhhccCcCCCCCEEecCCc---eEEEcccccc
Confidence            467799999999999998765   7999987764

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=90.05  E-value=0.31  Score=39.41  Aligned_cols=34  Identities=24%  Similarity=0.194  Sum_probs=28.5

Q ss_pred             HHhhh--hcCceecCCCcCcEEEcCCCCCcEEEeccCC
Q 024572           25 FFSSL--SQQICHRDLKLENTLLDGSPAPRLKICDFGY   60 (265)
Q Consensus        25 l~~lH--~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~   60 (265)
                      |.-.|  +.+.+|||..|+||+-|+.|.  +||.|-+.
T Consensus       154 L~~fH~~~~~~lHGD~np~NiM~D~~G~--lKlVDP~~  189 (308)
T PF07387_consen  154 LMDFHSENQHCLHGDCNPDNIMCDKFGY--LKLVDPVC  189 (308)
T ss_pred             HHHhhccCCCeecCCCChhheeecCCCC--EEecChhh
Confidence            44456  577999999999999998887  99999774

The function of this family is unknown.

>PRK06149 hypothetical protein; Provisional

Probab=90.01  E-value=0.23  Score=49.20  Aligned_cols=33  Identities=24%  Similarity=0.241  Sum_probs=25.9

Q ss_pred             hcCceecCCCcCcEEEcCCCCCc---EEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPR---LKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~---vkl~Dfg~a~   62 (265)
                      ..|+||+|+++.||+++.+..+.   .-|+|||-+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            68899999999999998653221   3799999764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=89.98  E-value=0.23  Score=43.11  Aligned_cols=31  Identities=16%  Similarity=0.253  Sum_probs=26.2

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...++|||+.+.||++...+   ++++|+.++.
T Consensus       190 ~~~~llHGDl~~gNi~~~~~~---~~~iD~e~~~  220 (370)
T TIGR01767       190 SAETLLHGDLHSGSIFVSEHE---TKVIDPEFAF  220 (370)
T ss_pred             CcceeeeccCCcccEEEcCCC---CEEEcCcccc
Confidence            577899999999999997654   7899998664

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=89.57  E-value=0.32  Score=38.25  Aligned_cols=51  Identities=10%  Similarity=-0.042  Sum_probs=39.3

Q ss_pred             HHHHHhccccchHHHHHhhhh---cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           10 EFVMLEGSVKMKPDIFFSSLS---QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        10 ~~~~~~~~~~~i~~~l~~lH~---~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .+..+..++.++++.+.+++.   ..+.-.|++|+|+-+++++.  +|++|...+.
T Consensus        57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~--lk~iDld~v~  110 (188)
T PF12260_consen   57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGR--LKLIDLDDVF  110 (188)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCc--EEEEechhcc
Confidence            445555566677777777775   55888999999999997765  9999998654

Proteins in this uncharacterised family are described as transmembrane proteins.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=89.26  E-value=0.34  Score=41.72  Aligned_cols=30  Identities=30%  Similarity=0.476  Sum_probs=24.2

Q ss_pred             CceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           32 QICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        32 ~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      -++|.|+.+.|||++.++ +.++++||..|.
T Consensus       183 v~CHnDl~~~NiL~~~~~-~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDE-GKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCCC-CcEEEEcccccC
Confidence            379999999999997442 249999998764

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=89.18  E-value=0.25  Score=42.92  Aligned_cols=31  Identities=32%  Similarity=0.528  Sum_probs=26.4

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      .-..-|||+...||||+ +|.  |.|+||-+++.
T Consensus       340 kf~fehrnlt~~niLId-~Gn--vtLIDfklsRl  370 (488)
T COG5072         340 KFPFEHRNLTLDNILID-EGN--VTLIDFKLSRL  370 (488)
T ss_pred             cCCcccccccccceeee-cCc--eEEEEeeeeec
Confidence            34588999999999998 555  99999999873

>PLN02876 acyl-CoA dehydrogenase

Probab=86.11  E-value=0.65  Score=45.22  Aligned_cols=33  Identities=21%  Similarity=0.382  Sum_probs=25.4

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ..+||+|+++.||+++......+-|.||.++..
T Consensus       225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             cceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            469999999999999753322257999998763

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=84.02  E-value=1.3  Score=34.63  Aligned_cols=59  Identities=17%  Similarity=0.158  Sum_probs=40.6

Q ss_pred             Cccccc-chHHHHHH--hccccchHHHHHhhhhcCceecCCC-c-CcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVML--EGSVKMKPDIFFSSLSQQICHRDLK-L-ENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~~--~~~~~~i~~~l~~lH~~~ivH~dlk-p-~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||+..+ +|.+....  +..+.-+++.-+-|-..||-|+.|+ | .||++..+ .  +.|+||..|+
T Consensus        91 me~i~G~~L~~~~~~~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~-~--~~iIDFd~At  154 (201)
T COG2112          91 MEYIDGRPLGKLEIGGDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDR-D--VYIIDFDSAT  154 (201)
T ss_pred             hhhhcCcchhhhhhcccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCC-c--EEEEEccchh
Confidence            777777 77776663  3333344455555889999999997 3 45666433 3  8999999775

>PLN02756 S-methyl-5-thioribose kinase

Probab=81.69  E-value=1.1  Score=39.70  Aligned_cols=30  Identities=17%  Similarity=0.331  Sum_probs=0.0

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      +...++||||.|.||++..++   .+++|..++
T Consensus       228 ~~~~L~HGDl~~g~i~~~~~~---~~~id~ef~  257 (418)
T PLN02756        228 RAQALVHGDLHTGSVMVTPDS---TQVIDPEFA  257 (418)
T ss_pred             cccceeecCCCCCcEEEcCCC---ceEecchhh

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	265
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		5e-80
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		7e-80
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		7e-79
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-78
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-75
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-74
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		9e-30
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-26
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-26
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-26
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-26
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-26
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-26
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-26
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-26
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-26
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-25
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-25
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-24
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-24
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-24
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-24
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		7e-24
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-23
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-23
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-22
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-22
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-22
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-22
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-22
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-22
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-22
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-22
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-22
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-22
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-22
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-22
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-22
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-22
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-22
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-22
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-22
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-22
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-22
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-22
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-22
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-22
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-22
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-22
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-22
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-22
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-22
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-22
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-22
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		5e-22
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-22
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-22
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		7e-22
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		9e-22
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		9e-22
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-21
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-21
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-21
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-21
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		3e-21
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-21
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-21
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-21
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-21
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-21
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-21
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-21
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		4e-21
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		4e-21
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-21
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		6e-21
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		6e-21
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		7e-21
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		7e-21
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		7e-21
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		7e-21
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		8e-21
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		8e-21
2oza_A	356	Structure Of P38alpha Complex Length = 356		8e-21
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		9e-21
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		1e-20
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-20
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-20
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-20
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-20
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-20
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-20
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-20
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-19
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-19
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-19
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		1e-19
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-19
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-19
3soa_A	444	Full-Length Human Camkii Length = 444		3e-19
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-19
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-19
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-19
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-19
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-19
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-19
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		9e-19
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-19
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		9e-19
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-18
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-18
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-18
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-18
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-18
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-18
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-18
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-18
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-18
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-18
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-18
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-18
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-18
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-18
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-18
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-18
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-18
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-18
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-18
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-18
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-18
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-18
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-18
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-18
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-18
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-18
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-18
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-18
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-18
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-18
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-18
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		8e-18
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-18
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		8e-18
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-17
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-17
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-17
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-17
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-17
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-17
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-17
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-17
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-17
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-17
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-17
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-17
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-17
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-17
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-17
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		6e-17
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		6e-17
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-16
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-16
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-16
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-16
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-16
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-16
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-16
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-16
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-16
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-16
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-16
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-16
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-16
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-16
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-16
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-16
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-16
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-16
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-16
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-16
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-16
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-16
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		5e-16
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-16
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-16
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-16
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-16
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		7e-16
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		7e-16
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		8e-16
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		8e-16
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		9e-16
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		9e-16
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-15
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-15
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-15
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-15
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-15
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-15
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-15
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-15
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-15
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-15
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-15
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-15
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-15
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-15
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		4e-15
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		4e-15
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-15
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		7e-15
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-14
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-14
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-14
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-14
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-14
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-14
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-14
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-14
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-14
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-14
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		1e-14
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-14
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-14
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-14
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-14
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-14
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-14
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-14
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-14
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-14
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-14
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-14
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-14
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-14
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-14
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-14
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-14
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-14
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-14
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-14
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-14
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-14
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-14
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-14
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-14
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-14
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-14
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-14
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-14
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-14
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-14
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-14
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-14
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-14
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-14
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-14
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-14
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-14
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-14
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-14
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-14
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-14
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-14
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-14
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-14
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-14
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-14
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-14
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-14
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-14
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-14
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-14
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-14
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-14
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-14
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-14
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-14
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-14
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-14
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-14
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-14
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-14
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-14
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-14
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-14
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-14
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		5e-14
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-14
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-14
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-14
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-14
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-14
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-14
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-14
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		6e-14
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		6e-14
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		7e-14
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		7e-14
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-14
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-13
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-13
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-13
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-13
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-13
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-13
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-13
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-13
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-13
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		6e-13
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-12
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-12
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-12
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-12
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-12
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-12
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-12
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-12
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-12
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-12
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		6e-12
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-12
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		7e-12
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		7e-12
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		8e-12
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		8e-12
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-12
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-12
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		8e-12
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		8e-12
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		8e-12
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		8e-12
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-12
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		8e-12
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		8e-12
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		8e-12
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-12
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-12
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		9e-12
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-11
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-11
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-11
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-11
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-11
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-11
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-11
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-11
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		5e-11
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-11
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-11
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-10
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-10
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-10
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-10
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		8e-10
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		9e-10
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		9e-10
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-09
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-09
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-09
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-09
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-09
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-09
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-09
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-09
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-09
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-09
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		4e-09
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-09
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-09
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-09
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-09
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-09
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-09
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		8e-09
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-08
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-08
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-08
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-08
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-08
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-08
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-08
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-08
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-08
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-08
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-08
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-08
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-08
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-08
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-08
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-08
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-08
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-08
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-08
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-08
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-08
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-08
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-08
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-08
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-08
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-08
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-08
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-08
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-08
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-08
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-08
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-08
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		4e-08
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		4e-08
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-08
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-08
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		8e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		8e-08
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-07
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-07
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-07
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-07
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-07
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-07
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-07
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-07
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-07
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-07
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-07
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-07
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-07
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-07
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		1e-07
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-07
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-07
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-07
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-07
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-07
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-07
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-07
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-07
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-07
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-07
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		3e-07
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-07
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		3e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		3e-07
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-07
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-07
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-07
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		4e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		4e-07
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-07
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-07
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		6e-07
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		7e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		7e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		8e-07
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		8e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		8e-07
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		9e-07
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		9e-07
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		1e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-06
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-06
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-06
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		3e-06
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		4e-06
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-06
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-06
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-06
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		5e-06
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		5e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		5e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-06
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		6e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		6e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		6e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		7e-06
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		8e-06
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		8e-06
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		8e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		8e-06
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		8e-06
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		8e-06
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		9e-06
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		9e-06
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-05
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		1e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-05
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-05
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		3e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		3e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-05
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-05
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		4e-05
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		4e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		4e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		4e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		4e-05
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		4e-05
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		5e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		5e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-05
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		5e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		5e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		5e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		6e-05
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-05
4exu_A	371	Mapk13, Inactive Form Length = 371		6e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		9e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		9e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-04
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-04
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		2e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-04
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-04
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		3e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		4e-04
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		4e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		4e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		4e-04
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		4e-04
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		4e-04
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-04
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		5e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		6e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		6e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		8e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		9e-04

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score =  293 bits (751), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 137/196 (69%), Positives = 165/196 (84%), Gaps = 5/196 (2%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + Q+CHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL ++E
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+PKNFRKTI RI+ VQY IPDYVHIS +CR+
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 251
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT--ETAQAIYYRKENPTFSLQSVEEIT 207
           L+SRIFVA+P++RI+I EI++H WFLKNLP +L    T    +   + P    QS+EEI 
Sbjct: 252 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFAASDQPG---QSIEEIM 308
Query: 208 KIVEEAKVPPPVSRSI 223
           +I+ EA VPP  ++++
Sbjct: 309 QIIAEATVPPAGTQNL 324

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score =  293 bits (750), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 137/196 (69%), Positives = 165/196 (84%), Gaps = 5/196 (2%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + Q+CHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL ++E
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+PKNFRKTI RI+ VQY IPDYVHIS +CR+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT--ETAQAIYYRKENPTFSLQSVEEIT 207
           L+SRIFVA+P++RI+I EI++H WFLKNLP +L    T    +   + P    QS+EEI 
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG---QSIEEIM 309
Query: 208 KIVEEAKVPPPVSRSI 223
           +I+ EA VPP  ++++
Sbjct: 310 QIIAEATVPPAGTQNL 325

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score =  290 bits (741), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 136/196 (69%), Positives = 164/196 (83%), Gaps = 5/196 (2%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + Q+CHRDLKLENTLLDGSPAPRLKIC FGYSKSS+LHS+PKSTVGTPAYIAPEVL ++E
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+PKNFRKTI RI+ VQY IPDYVHIS +CR+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT--ETAQAIYYRKENPTFSLQSVEEIT 207
           L+SRIFVA+P++RI+I EI++H WFLKNLP +L    T    +   + P    QS+EEI 
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG---QSIEEIM 309
Query: 208 KIVEEAKVPPPVSRSI 223
           +I+ EA VPP  ++++
Sbjct: 310 QIIAEATVPPAGTQNL 325

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 135/196 (68%), Positives = 163/196 (83%), Gaps = 5/196 (2%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + Q+CHRDLKLENTLLDGSPAPRLKIC FGYSKSS+LHS+PK TVGTPAYIAPEVL ++E
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+PKNFRKTI RI+ VQY IPDYVHIS +CR+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT--ETAQAIYYRKENPTFSLQSVEEIT 207
           L+SRIFVA+P++RI+I EI++H WFLKNLP +L    T    +   + P    QS+EEI 
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG---QSIEEIM 309
Query: 208 KIVEEAKVPPPVSRSI 223
           +I+ EA VPP  ++++
Sbjct: 310 QIIAEATVPPAGTQNL 325

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score =  278 bits (711), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 131/188 (69%), Positives = 156/188 (82%), Gaps = 5/188 (2%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + Q+ HRDLKLENTLLDGSPAPRLKI DFGYSK+S+LHS+PKS VGTPAYIAPEVL ++E
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE 192
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+PKNFRKTI RI+ VQY IPDYVHIS +CR+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT--ETAQAIYYRKENPTFSLQSVEEIT 207
           L+SRIFVA+P++RI+I EI++H WFLKNLP +L    T    +   + P    QS+EEI 
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG---QSIEEIM 309
Query: 208 KIVEEAKV 215
           +I+ EA V
Sbjct: 310 QIIAEATV 317

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score =  275 bits (702), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 130/194 (67%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL R+E
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+P+++RKTI RI++V+Y IPD + IS +C +
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           L+SRIFVA+P+ RI+I EIK+H WFLKNLP +L   +      +E P   +QS++ I +I
Sbjct: 254 LISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQE-PEQPMQSLDTIMQI 312
Query: 210 VEEAKVPPPVSRSI 223
           + EA +P   +R +
Sbjct: 313 ISEATIPAVRNRCL 326

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  127 bits (318), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 10/162 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRDLK EN LLD +    +KI DFG S      +  K++ G+P Y APEV++ + Y
Sbjct: 127 HKIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   DVWSCG+ LYVMLVG  PF+D+  P  F+K  S +    Y +PD+  +S   ++L
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV----YVMPDF--LSPGAQSL 238
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPREL--TETAQAIY 190
           + R+ VA+P +RITI+EI+  PWF  NLP  L   E  Q  Y
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSY 280

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 8/143 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I HRDLK EN LLD      +KI DFG+S    +  +  +  G+P Y APE+   ++Y
Sbjct: 130 KRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
           DG   DVWS GV LY ++ G+ PF    D +N ++   R++  +Y+IP Y  +S DC NL
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENL 241
Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           L R  V NP +R T+++I    W
Sbjct: 242 LKRFLVLNPIKRGTLEQIMKDRW 264

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   ++YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF+ Q    N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   ++YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF+ Q    N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   ++YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF+ Q    N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++  +  G+P Y APE+   ++YDG
Sbjct: 127 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF    D +N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 238
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 239 KFLILNPSKRGTLEQIMKDRW 259

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++  +  G P Y APE+   ++YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF+ Q    N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I HRDLK EN LLD      +KI DFG+S    +  +  +  G P Y APE+   ++Y
Sbjct: 133 KRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
           DG   DVWS GV LY ++ G+ PF    D +N ++   R++  +Y+IP Y  +S DC NL
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENL 244
Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           L R  V NP +R T+++I    W
Sbjct: 245 LKRFLVLNPIKRGTLEQIMKDRW 267

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++     G+P Y APE+   ++YDG
Sbjct: 134 IVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF    D +N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 245
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 246 KFLILNPSKRGTLEQIMKDRW 266

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLD      +KI DFG+S      ++  +  G P Y APE+   ++YDG
Sbjct: 134 IVHRDLKAENLLLDADX--NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF+ Q    N ++   R++  +Y+IP Y   S DC NLL 
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFYX--STDCENLLK 245
Query: 153 RIFVANPSRRITIKEIKSHPW 173
           +  + NPS+R T+++I    W
Sbjct: 246 KFLILNPSKRGTLEQIXKDRW 266

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
             + HRDLK EN LLD       KI DFG S         +++ G+P Y APEV+S R Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   D+WSCGV LY +L G  PF+D+  P  F+K    I    + IP+Y  +++    L
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGGVFYIPEY--LNRSVATL 241
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           L  +   +P +R TIK+I+ H WF ++LP  L
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
             + HRDLK EN LLD       KI DFG S         + + G+P Y APEV+S R Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   D+WSCGV LY +L G  PF+D+  P  F+K    I    + IP+Y  +++    L
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGGVFYIPEY--LNRSVATL 241
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           L  +   +P +R TIK+I+ H WF ++LP  L
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRDLK EN LLD      +KI DFG S      +  K++ G+P Y APEV+S + Y
Sbjct: 132 HKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   DVWSCGV LYVML    PF+D+  P  F+   + +    Y +P +  +S     L
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGL 243
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE 184
           + R+ + NP  RI+I EI    WF  +LP  L E
Sbjct: 244 IKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLE 277

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRDLK EN LLD      +KI DFG S      +  K++ G+P Y APEV+S + Y
Sbjct: 131 HKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   DVWSCGV LYVML    PF+D+  P  F+   + +    Y +P +  +S     L
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGL 242
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           + R+ + NP  RI+I EI    WF  +LP  L
Sbjct: 243 IKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 274

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRDLK EN LLD      +KI DFG S      +  K++ G+P Y APEV+S + Y
Sbjct: 126 HKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   DVWSCGV LYVML    PF+D+  P  F+   + +    Y +P +  +S     L
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGL 237
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           + R+ + NP  RI+I EI    WF  +LP  L
Sbjct: 238 IKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 269

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRDLK EN LLD      +KI DFG S      +  K++ G+P Y APEV+S + Y
Sbjct: 122 HKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   DVWSCGV LYVML    PF+D+  P  F+   + +    Y +P +  +S     L
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGL 233
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           + R+ + NP  RI+I EI    WF  +LP  L
Sbjct: 234 IKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 265

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 9/160 (5%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRDLK EN LL+  S    +KI DFG S    +  + K  +GT  YIAPEVL R++
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKK 181
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
           YD K  DVWSCGV LY++L G  PF  Q D    ++ + R+   ++    PD+  +S + 
Sbjct: 182 YDEK-CDVWSCGVILYILLCGYPPFGGQTD----QEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQ 187
           + L+  +    PS+RI+ +E  +HPW +K   ++ T+  +
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGK 276

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRDLK EN LL+  S    +KI DFG S    +  + K  +GT  YIAPEVL R++
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKK 198
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
           YD K  DVWSCGV LY++L G  PF  Q D    ++ + R+   ++    PD+  +S + 
Sbjct: 199 YDEK-CDVWSCGVILYILLCGYPPFGGQTD----QEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           + L+  +    PS+RI+ +E  +HPW +K
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVK 282

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
             + HRDLK EN LLD       KI DFG S         + + G+P Y APEV+S R Y
Sbjct: 135 HMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            G   D+WS GV LY +L G  PF+D   P  F+K    I    +  P Y++ S    +L
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI----FYTPQYLNPS--VISL 246
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEE 205
           L  +   +P +R TIK+I+ H WF ++LP+         Y   E+P++S   +++
Sbjct: 247 LKHMLQVDPMKRATIKDIREHEWFKQDLPK---------YLFPEDPSYSSTMIDD 292

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 152 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 208
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 209 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 261
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 143 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 199
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 200 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 252
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 253 LISRLLKHNPSQRPMLREVLEHPWITAN 280

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 152 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRM 208
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 209 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 261
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 131 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 187
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 188 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 129 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRM 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 129 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 129 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 127 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRDTLCGTLDYLPPEMIEGRM 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 184 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 236
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 131 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 187
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 188 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 125 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 181
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 182 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 234
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 235 LISRLLKHNPSQRPMLREVLEHPWITAN 262

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 130 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 186
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 187 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 240 LISRLLKHNPSQRPMLREVLEHPWITAN 267

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 123 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 179
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 180 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 232
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 233 LISRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE +  R 
Sbjct: 131 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEXIEGRX 187
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 188 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 241 LISRLLKHNPSQRPXLREVLEHPWITAN 268

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 131 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLXGTLDYLPPEMIEGRM 187
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 188 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 87/158 (55%), Gaps = 33/158 (20%)
Query: 31  QQICHRDLKLENTLL--DGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPEV 84
           Q+I HRD+K  N L+  DG     +KI DFG S     S  L S   +TVGTPA++APE 
Sbjct: 156 QKIIHRDIKPSNLLVGEDG----HIKIADFGVSNEFKGSDALLS---NTVGTPAFMAPES 208
Query: 85  LS--RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI----- 137
           LS  R+ + GK  DVW+ GVTLY  + G  PF D+           RIM +  KI     
Sbjct: 209 LSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-----------RIMCLHSKIKSQAL 257
Query: 138 --PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
             PD   I++D ++L++R+   NP  RI + EIK HPW
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 127 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSCHAP-SSRRTTLSGTLDYLPPEMIEGRM 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 184 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 236
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTELCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 129 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRM 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 126 SKKVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       ++ T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQDTYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 129 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRM 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 127 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRM 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 184 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 236
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 131 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRM 187
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 188 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 128 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRM 184
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 185 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 237
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 126 SKRVIHRDIKPENLLL-GS-AGELKIADFGWSVHAP-SSRRTXLCGTLDYLPPEMIEGRM 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 235
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 10/165 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTPA++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL-KNLPRELTETAQAI 189
             ++ + R+ V +P +R+TI++   HPW   K+  + L+  A A+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV 291

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 85/142 (59%), Gaps = 8/142 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK EN LLDG     +KI DFG+S    + ++  +  G+P Y APE+   ++YDG
Sbjct: 135 IVHRDLKAENLLLDGDM--NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDG 192
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
              DVWS GV LY ++ G+ PF    D +N ++   R++  +Y+IP Y  +S DC NLL 
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLK 246
Query: 153 RIFVANPSRRITIKEIKSHPWF 174
           ++ V NP +R ++++I    W 
Sbjct: 247 KLLVLNPIKRGSLEQIMKDRWM 268

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI +FG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 128 SKRVIHRDIKPENLLL-GS-AGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 184
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 185 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 237
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS A  LKI +FG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 129 SKRVIHRDIKPENLLL-GS-AGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFV--TEGARD 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS    LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 130 SKRVIHRDIKPENLLL-GSNG-ELKIADFGWSVHAP-SSRRDTLCGTLDYLPPEMIEGRM 186
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 187 HDEKV-DLWSLGVLCYEFLVGMPPFEAH----TYQETYRRISRVEFTFPDFV--TEGARD 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   N S+R+T+ E+  HPW   N
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIKAN 267

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL GS    LKI DFG+S  +   SR  +  GT  Y+ PE++  R 
Sbjct: 130 SKRVIHRDIKPENLLL-GSNG-ELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRM 186
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K+ D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V  ++  R+
Sbjct: 187 HDEKV-DLWSLGVLCYEFLVGMPPFEAH----TYQETYRRISRVEFTFPDFV--TEGARD 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   N S+R+T+ E+  HPW   N
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIKAN 267

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN  LLD + P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL-KNLPRELTETAQAIYYRK 193
             ++ + R+ V +P +R+TI++   HPW   K+  + L+  A A+   K
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEK 295

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 10/165 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN  LLD + P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL-KNLPRELTETAQAI 189
             ++ + R+ V +P +R+TI++   HPW   K+  + L+  A A+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV 291

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL-KNLPRELTETAQAI 189
             ++ + R+ V +P +R+TI++   HPW   K+  + L+  A A+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV 291

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL-KNLPRELTETAQAI 189
             ++ + R+ V +P +R+TI++   HPW   K+  + L+  A A+
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV 291

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 85/172 (49%), Gaps = 23/172 (13%)
Query: 31  QQICHRDLKLENTLLDGSPAP-RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRDLK EN LL+       +KI DFG S     +++ K  +GT  YIAPEVL R  
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGT 198
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF      KN    + R+   +Y   +P +  IS D 
Sbjct: 199 YDEK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFS 199
           ++L+ ++   +PS RIT  +   HPW  K              Y  E PT S
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQK--------------YSSETPTIS 291

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN  LLD + P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN  LLD + P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN  LLD + P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 245
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 273

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN  LLD + P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 245
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 273

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ + AV Y+  D  + + S 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANVSAVNYEFEDEYFSNTSA 246
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P +R+TI++   HPW
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 208
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 209 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 267
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 268 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 317

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 200
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 201 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 259
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 260 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 309

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 199
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 200 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 258
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 259 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 308

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 198
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 199 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 257
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 258 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 307

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 192
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 193 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 252 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 301

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 193
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 194 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 252
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 253 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 302

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 244
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 245 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 303
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 304 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 353

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 195 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 254 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 303

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 239 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 297
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 298 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 347

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 97.1 bits (240), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 195 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 254 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 303

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Query: 33  ICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRREY 90
           + HRDLK EN LL        +K+ DFG +       +      GTP Y++PEVL R+E 
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL-RKEA 182
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            GK  D+W+CGV LY++LVG  PF D++  K +++   +  A  +  P++  ++ + +NL
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI--KAGAYDFPSPEWDTVTPEAKNL 240
Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           ++++   NP++RIT  E   HPW
Sbjct: 241 INQMLTINPAKRITAHEALKHPW 263

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+       TP Y+APEVL   
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPE 192
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 193 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 252 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 301

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAP-RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRDLK EN LL+       +KI DFG S     +++ K  +GT  YIAPEVL R  
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGT 198
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF      KN    + R+   +Y   +P +  IS D 
Sbjct: 199 YDEK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           ++L+ ++   +PS RIT  +   HPW  K
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAP-RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRDLK EN LL+       +KI DFG S     +++ K  +GT  YIAPEVL R  
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGT 198
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF      KN    + R+   +Y   +P +  IS D 
Sbjct: 199 YDEK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           ++L+ ++   +PS RIT  +   HPW  K
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 33  ICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRREY 90
           I HRDLK EN LL   S    +K+ DFG +       +      GTP Y++PEVL +  Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            GK  D+W+CGV LY++LVG  PF D++  + +++   +  A  +  P++  ++ + ++L
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDL 240
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKE 194
           ++++   NP++RIT  E   HPW  +        T  ++ +R+E
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQR------STVASMMHRQE 278

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRR 88
             I HRDLK EN LL        +K+ DFG +       +      GTP Y++PEVL + 
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y GK  D+W+CGV LY++LVG  PF D++  K +++   +  A  +  P++  ++ + +
Sbjct: 209 PY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI--KAGAYDFPSPEWDTVTPEAK 265
Query: 149 NLLSRIFVANPSRRITIKEIKSHPW 173
           NL++++   NP++RIT  +   HPW
Sbjct: 266 NLINQMLTINPAKRITADQALKHPW 290

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 11/165 (6%)
Query: 33  ICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRREY 90
           I HRDLK EN LL   S    +K+ DFG +       +      GTP Y++PEVL +  Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            GK  D+W+CGV LY++LVG  PF D++  + +++   +  A  +  P++  ++ + ++L
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDL 240
Query: 151 LSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKEN 195
           ++++   NP++RIT  E   HPW  +        T  ++ +R+E 
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQR------STVASMMHRQET 279

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 31  QQICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRDLK EN LL+      L KI DFG S       + K  +GT  YIAPEVL R++
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKK 213
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YD K  DVWS GV L+++L G  PF  Q D +  RK         +  P++ ++S+  ++
Sbjct: 214 YDEK-CDVWSIGVILFILLAGYPPFGGQTDQEILRKV--EKGKYTFDSPEWKNVSEGAKD 270
Query: 150 LLSRIFVANPSRRITIKEIKSHPW 173
           L+ ++   +  RRI+ ++   HPW
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPW 294

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 33  ICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRREY 90
           + HRDLK EN LL        +K+ DFG +       +      GTP Y++PEVL +  Y
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            GK  D+W+CGV LY++LVG  PF D++  + +++   +  A  +  P++  ++ + ++L
Sbjct: 202 -GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDL 258
Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           ++++   NPS+RIT  E   HPW
Sbjct: 259 INKMLTINPSKRITAAEALKHPW 281

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 18/153 (11%)
Query: 30  SQQICHRDLKLENTLLDG--SPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPE 83
              I HRD+K EN LL    + AP +K+ DFG +    +S L+       VGTP ++APE
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAP-VKLGDFGVAIQLGESGLVAG---GRVGTPHFMAPE 203
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYV 141
           V+ R  Y GK  DVW CGV L+++L G  PF   ++     +    I+  +YK+    + 
Sbjct: 204 VVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWS 257
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           HIS+  ++L+ R+ + +P+ RIT+ E  +HPW 
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 33  ICHRDLKLENTLLDGSPAPR--LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           I HRDLK EN LL  +PAP   LKI DFG SK        K+  GTP Y APE+L    Y
Sbjct: 169 IVHRDLKPEN-LLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY 227
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQE-DPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
            G   D+WS G+  Y++L G  PF D+  D   FR    RI+  +Y    P +  +S + 
Sbjct: 228 -GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR----RILNCEYYFISPWWDEVSLNA 282
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++L+ ++ V +P +R+T  +   HPW
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPW 308

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 22/153 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV---GTPAYIAPEVLS 86
           S+ I +RDLK EN LLD +    +KI DFG++K       P  T    GTP YIAPEV+S
Sbjct: 124 SKDIIYRDLKPENILLDKNG--HIKITDFGFAKYV-----PDVTYXLCGTPDYIAPEVVS 176
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            + Y+ K  D WS G+ +Y ML G  PF D     N  KT  +I+  + + P +   ++D
Sbjct: 177 TKPYN-KSIDWWSFGILIYEMLAGYTPFYD----SNTMKTYEKILNAELRFPPF--FNED 229
Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            ++LLSR+   + S+R+       +++K+HPWF
Sbjct: 230 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D WS GV  Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 239 KYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEE 297
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R TI E  +HPW  ++  +P+    T++ +   KE
Sbjct: 298 VKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLKEDKE 347

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S++I H DLK EN +L     P PR+K+ DFG +      +  K+  GTP ++APE+++ 
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN- 184
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF  +      ++T++ I AV Y   +  + + S+
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDFDEEYFSNTSE 240
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P RR+TI +   H W
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSW 268

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 33  ICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRREY 90
           + HR+LK EN LL        +K+ DFG +       +      GTP Y++PEVL +  Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
            GK  D+W+CGV LY++LVG  PF D++  + +++   +  A  +  P++  ++ + ++L
Sbjct: 191 -GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDL 247
Query: 151 LSRIFVANPSRRITIKEIKSHPW 173
           ++++   NPS+RIT  E   HPW
Sbjct: 248 INKMLTINPSKRITAAEALKHPW 270

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 13/148 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKSTVGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N LLD      +KI DFG  K ++L  ++     GTP YIAPE+L  +
Sbjct: 137 SKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH-ISQDC 147
           +Y+  + D WS GV LY ML+G  PF  Q++ + F        +++   P Y   + ++ 
Sbjct: 195 KYNHSV-DWWSFGVLLYEMLIGQSPFHGQDEEELFH-------SIRMDNPFYPRWLEKEA 246
Query: 148 RNLLSRIFVANPSRRITIK-EIKSHPWF 174
           ++LL ++FV  P +R+ ++ +I+ HP F
Sbjct: 247 KDLLVKLFVREPEKRLGVRGDIRQHPLF 274

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 13/148 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSRPKSTVGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N LLD      +KI DFG  K ++L  ++     GTP YIAPE+L  +
Sbjct: 136 SKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH-ISQDC 147
           +Y+  + D WS GV LY ML+G  PF  Q++ + F        +++   P Y   + ++ 
Sbjct: 194 KYNHSV-DWWSFGVLLYEMLIGQSPFHGQDEEELFH-------SIRMDNPFYPRWLEKEA 245
Query: 148 RNLLSRIFVANPSRRITIK-EIKSHPWF 174
           ++LL ++FV  P +R+ ++ +I+ HP F
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQHPLF 273

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
            I HRDLK EN LLD      +K+ DFG+S       + +S  GTP+Y+APE++     D
Sbjct: 144 NIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 92  -----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
                GK  D+WS GV +Y +L G+ PF  ++     R  +S     Q+  P++   S  
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSPEWDDYSDT 259
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
            ++L+SR  V  P +R T +E  +HP+F + +  E+
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN L        ++ I DFG SK         +  GTP Y+APEVL+++ Y 
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY- 199
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDCRN 149
            K  D WS GV  Y++L G  PF D+ D K F     +I+  +Y+   P +  IS   ++
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFE----QILKAEYEFDSPYWDDISDSAKD 255
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQA 188
            +  +   +P++R T ++   HPW   +  L + + E+  A
Sbjct: 256 FIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSA 296

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S++I H DLK EN +L     P PR+K+ DFG +      +  K+  GTP ++APE+++ 
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN- 191
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF  +      ++T++ I AV Y   +  + + S+
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDFDEEYFSNTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P RR+ I +   H W
Sbjct: 248 LAKDFIRRLLVKDPKRRMXIAQSLEHSW 275

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 30/198 (15%)
Query: 30  SQQICHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSLLHSRPKSTVGTPAY----IAPE 83
           SQ + HRDLK  N L +D S  P  L+ICDFG++K           + TP Y    +APE
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL---RAENGLLMTPCYTANFVAPE 195
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFED--QEDPKNFRKTISRIMAVQYKIP--D 139
           VL R+ YD +  D+WS G+ LY ML G  PF +   + P+     ++RI + ++ +   +
Sbjct: 196 VLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI---LTRIGSGKFTLSGGN 251
Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK--NLPR--------ELTETAQAI 189
           +  +S+  ++L+S++   +P +R+T K++  HPW  +   LP+        +L + A A 
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAA 311
Query: 190 YYRKEN---PTFSLQSVE 204
            Y   N   PT  L+ +E
Sbjct: 312 TYSALNSSKPTPQLKPIE 329

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 30/198 (15%)
Query: 30  SQQICHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSLLHSRPKSTVGTPAY----IAPE 83
           SQ + HRDLK  N L +D S  P  L+ICDFG++K           + TP Y    +APE
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL---RAENGLLMTPCYTANFVAPE 195
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFED--QEDPKNFRKTISRIMAVQYKIP--D 139
           VL R+ YD +  D+WS G+ LY ML G  PF +   + P+   + ++RI + ++ +   +
Sbjct: 196 VLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPE---EILTRIGSGKFTLSGGN 251
Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK--NLPR--------ELTETAQAI 189
           +  +S+  ++L+S++   +P +R+T K++  HPW  +   LP+        +L + A A 
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAA 311
Query: 190 YYRKEN---PTFSLQSVE 204
            Y   N   PT  L+ +E
Sbjct: 312 TYSALNSSKPTPQLKPIE 329

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S++I H DLK EN +L     P PR+K+ DFG +      +  K+  GTP ++APE+++ 
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN- 205
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF  +      ++T++ I AV Y   +  + + S+
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDFDEEYFSNTSE 261
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + R+ V +P RR+ I +   H W
Sbjct: 262 LAKDFIRRLLVKDPKRRMXIAQSLEHSW 289

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 33  ICHRDLKLENTL---LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDLK EN L   LD     ++ I DFG SK     S   +  GTP Y+APEVL+++ 
Sbjct: 137 IVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
           Y  K  D WS GV  Y++L G  PF D+ D K F     +I+  +Y+   P +  IS   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSA 249
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++ +  +   +P +R T ++   HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 33  ICHRDLKLENTL---LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDLK EN L   LD     ++ I DFG SK     S   +  GTP Y+APEVL+++ 
Sbjct: 137 IVHRDLKPENLLYYSLD--EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
           Y  K  D WS GV  Y++L G  PF D+ D K F     +I+  +Y+   P +  IS   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSA 249
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFL------KNLPRELTE 184
           ++ +  +   +P +R T ++   HPW        KN+ + ++E
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSE 292

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 15/151 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      +K+ DFG SK S+ H +   S  GT  Y+APEV++RR
Sbjct: 144 SLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  + AD WS GV ++ ML G  PF+     K+ ++T++ I+  +  +P +  +S + +
Sbjct: 202 GHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQ 254
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +LL  +F  NP+ R+      ++EIK H +F
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 33  ICHRDLKLENTL---LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDLK EN L   LD     ++ I DFG SK     S   +  GTP Y+APEVL+++ 
Sbjct: 137 IVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
           Y  K  D WS GV  Y++L G  PF D+ D K F     +I+  +Y+   P +  IS   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSA 249
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++ +  +   +P +R T ++   HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 33  ICHRDLKLENTL---LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDLK EN L   LD     ++ I DFG SK     S   +  GTP Y+APEVL+++ 
Sbjct: 137 IVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC 147
           Y  K  D WS GV  Y++L G  PF D+ D K F     +I+  +Y+   P +  IS   
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSA 249
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++ +  +   +P +R T ++   HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 15/151 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      +K+ DFG SK S+ H +   S  GT  Y+APEV++RR
Sbjct: 145 SLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  + AD WS GV ++ ML G  PF+     K+ ++T++ I+  +  +P +  +S + +
Sbjct: 203 GHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQ 255
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +LL  +F  NP+ R+      ++EIK H +F
Sbjct: 256 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 15/151 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      +K+ DFG SK S+ H +   S  GT  Y+APEV++RR
Sbjct: 144 SLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  + AD WS GV ++ ML G  PF+     K+ ++T++ I+  +  +P +  +S + +
Sbjct: 202 GHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEAQ 254
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +LL  +F  NP+ R+      ++EIK H +F
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
            I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++     D
Sbjct: 131 NIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 92  -----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
                GK  D+WS GV +Y +L G+ PF  ++     R  +S     Q+  P++   S  
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSPEWDDYSDT 246
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++L+SR  V  P +R T +E  +HP+F
Sbjct: 247 VKDLVSRFLVVQPQKRYTAEEALAHPFF 274

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
            I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++     D
Sbjct: 144 NIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 92  -----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
                GK  D+WS GV +Y +L G+ PF  ++     R  +S     Q+  P++   S  
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSPEWDDYSDT 259
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
            ++L+SR  V  P +R T +E  +HP+F + +  E+
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 30  SQQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L         LK+ DFG++K +  ++  ++   TP Y+APEVL   
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPE 204
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF              RI   QY  P+  +  +S+D
Sbjct: 205 KYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNL--PRELTETAQAIYYRKEN 195
            + L+  +   +P+ R+TI +  +HPW  +++  P+    TA+ +   K++
Sbjct: 264 AKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDH 314

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 124 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWYNKPLKK 269

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPLKK 270

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
           LL +I V NPS RITI +IK   W+ K L +
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRDL L N LL  +    +KI DFG +    + H +  +  GTP YI+PE+ +R 
Sbjct: 130 SHGILHRDLTLSNLLL--TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            + G  +DVWS G   Y +L+G  PF    D    + T+++++   Y++P ++ I  + +
Sbjct: 188 AH-GLESDVWSLGCMFYTLLIGRPPF----DTDTVKNTLNKVVLADYEMPSFLSI--EAK 240
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           +L+ ++   NP+ R+++  +  HP+  +N
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNL 178
           LL +I V NPS RITI +IK   W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNL 178
           LL +I V NPS RITI +IK   W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 30  SQQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L         LK+ DFG++K +  ++  ++   TP Y+APEVL   
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPE 185
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF              RI   QY  P+  +  +S+D
Sbjct: 186 KYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 244
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNL--PRELTETAQAIYYRKEN 195
            + L+  +   +P+ R+TI +  +HPW  +++  P+    TA+ +   K++
Sbjct: 245 AKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDH 295

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN  LLD + P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ I +V Y   +  + H S+
Sbjct: 193 -EPLGLEADMWSIGVITYILLSGASPF--LGDTK--QETLANITSVSYDFDEEFFSHTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + ++ V    +R+TI+E   HPW
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNL 178
           LL +I V NPS RITI +IK   W+ K L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSRRE 89
           I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L RRE
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I      
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNL 178
           LL +I V NPS RITI +IK   W+ K L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN  LLD + P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ I +V Y   +  + H S+
Sbjct: 193 -EPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITSVSYDFDEEFFSHTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + ++ V    +R+TI+E   HPW
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN  LLD + P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ I +V Y   +  + H S+
Sbjct: 193 -EPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITSVSYDFDEEFFSHTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + ++ V    +R+TI+E   HPW
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HR+LK EN LL   +    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K  D+W+CGV LY++LVG  PF D++  + + +   +  A  Y  P++  ++ + +
Sbjct: 206 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAK 262
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
           +L+  +   NP +RIT  +    PW 
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWI 288

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HR+LK EN LL   +    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K  D+W+CGV LY++LVG  PF D++  + + +   +  A  Y  P++  ++ + +
Sbjct: 183 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAK 239
Query: 149 NLLSRIFVANPSRRITIKEIKSHPW 173
           +L+  +   NP +RIT  +    PW
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPW 264

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVL--SR 87
           +  I HRDLK EN LLD +   ++++ DFG+S       + +   GTP Y+APE+L  S 
Sbjct: 218 ANNIVHRDLKPENILLDDNM--QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275
Query: 88  REYD---GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVH 142
            E     GK  D+W+CGV L+ +L G+ PF  +      R     IM  QY+   P++  
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSSPEWDD 331
Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            S   ++L+SR+   +P  R+T ++   HP+F
Sbjct: 332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HR+LK EN LL   +    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K  D+W+CGV LY++LVG  PF D++  + + +   +  A  Y  P++  ++ + +
Sbjct: 183 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAK 239
Query: 149 NLLSRIFVANPSRRITIKEIKSHPW 173
           +L+  +   NP +RIT  +    PW
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPW 264

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HR+LK EN LL   +    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K  D+W+CGV LY++LVG  PF D++  + + +   +  A  Y  P++  ++ + +
Sbjct: 182 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAK 238
Query: 149 NLLSRIFVANPSRRITIKEIKSHPW 173
           +L+  +   NP +RIT  +    PW
Sbjct: 239 SLIDSMLTVNPKKRITADQALKVPW 263

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN  LLD + P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ I AV Y   +  +   S+
Sbjct: 193 -EPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITAVSYDFDEEFFSQTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + ++ V    +R+TI+E   HPW
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN  LLD + P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ I AV Y   +  +   S+
Sbjct: 193 -EPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITAVSYDFDEEFFSQTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + ++ V    +R+TI+E   HPW
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +I HRDLK EN LL+  S    ++I DFG S       + K  +GT  YIAPEVL    
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 203
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF    +  N    + ++   +Y  ++P +  +S+  
Sbjct: 204 YDEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++L+ ++    PS RI+ ++   H W
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDHEW 284

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 26  FSSL----SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGT 76
           FS+L    +Q ICHRD+K EN L   + +  +K+ DFG SK     ++  +    +  GT
Sbjct: 178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237
Query: 77  PAYIAPEVL-SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY 135
           P ++APEVL +  E  G   D WS GV L+++L+GA PF    D     + +++ +   +
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC--F 295
Query: 136 KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
           + P+Y  +S   R+LLS +   N   R        HPW
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +I HRDLK EN LL+  S    ++I DFG S       + K  +GT  YIAPEVL    
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 227
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF    +  N    + ++   +Y  ++P +  +S+  
Sbjct: 228 YDEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESA 282
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++L+ ++    PS RI+ ++   H W
Sbjct: 283 KDLIRKMLTYVPSMRISARDALDHEW 308

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +I HRDLK EN LL+  S    ++I DFG S       + K  +GT  YIAPEVL    
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 226
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF    +  N    + ++   +Y  ++P +  +S+  
Sbjct: 227 YDEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESA 281
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++L+ ++    PS RI+ ++   H W
Sbjct: 282 KDLIRKMLTYVPSMRISARDALDHEW 307

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 33  ICHRDLKLENTL-LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN L L      ++ I DFG SK    +    +  GTP Y+APEVL+++ Y 
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTACGTPGYVAPEVLAQKPY- 184
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
            K  D WS GV  Y++L G  PF ++ + K F K   +    +++ P +  IS+  ++ +
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI--KEGYYEFESPFWDDISESAKDFI 242
Query: 152 SRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQ 201
             +   +P+ R T ++  SHPW   N     T   + IY     P+ SLQ
Sbjct: 243 CHLLEKDPNERYTCEKALSHPWIDGN-----TALHRDIY-----PSVSLQ 282

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 30  SQQICHRDLKLEN-TLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN  LLD + P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
            E  G  AD+WS GV  Y++L GA PF    D K  ++T++ I AV Y   +  +   S+
Sbjct: 193 -EPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITAVSYDFDEEFFSQTSE 247
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPW 173
             ++ + ++ V    +R+TI+E   HPW
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 18/152 (11%)
Query: 31  QQICHRDLKLENTLLDG--SPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPEV 84
             I HRD+K    LL    + AP +K+  FG +    +S L+       VGTP ++APEV
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAP-VKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPEV 206
Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVH 142
           + R  Y GK  DVW CGV L+++L G  PF   ++     +    I+  +YK+    + H
Sbjct: 207 VKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWSH 260
Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           IS+  ++L+ R+ + +P+ RIT+ E  +HPW 
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWL 292

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +I HRDLK EN LL+  S    ++I DFG S       + K  +GT  YIAPEVL    
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 209
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YD K  DVWS GV LY++L G  PF    +    +K         +++P +  +S+  ++
Sbjct: 210 YDEK-CDVWSTGVILYILLSGCPPFNGANEYDILKKV--EKGKYTFELPQWKKVSESAKD 266
Query: 150 LLSRIFVANPSRRITIKEIKSHPW 173
           L+ ++    PS RI+ ++   H W
Sbjct: 267 LIRKMLTYVPSMRISARDALDHEW 290

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +I HRDLK EN LL+  S    ++I DFG S       + K  +GT  YIAPEVL    
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-HGT 203
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           YD K  DVWS GV LY++L G  PF    +  N    + ++   +Y  ++P +  +S+  
Sbjct: 204 YDEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPW 173
           ++L+ +     PS RI+ ++   H W
Sbjct: 259 KDLIRKXLTYVPSXRISARDALDHEW 284

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 30  SQQICHRDLKLENTLLDG--SPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPE 83
              I HRD+K    LL    + AP +K+  FG +    +S L+       VGTP ++APE
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAP-VKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPE 203
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYV 141
           V+ R  Y GK  DVW CGV L+++L G  PF   ++     +    I+  +YK+    + 
Sbjct: 204 VVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWS 257
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           HIS+  ++L+ R+ + +P+ RIT+ E  +HPW 
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 13/154 (8%)
Query: 30  SQQICHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSLLHSRPKSTVGTPAY----IAPE 83
           +Q + HRDLK  N L +D S  P  ++ICDFG++K           + TP Y    +APE
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL---RAENGLLMTPCYTANFVAPE 190
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YV 141
           VL R+ YD    D+WS GV LY ML G  PF +  D     + ++RI + ++ +    + 
Sbjct: 191 VLERQGYDAA-CDIWSLGVLLYTMLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWN 248
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
            +S   ++L+S++   +P +R+T   +  HPW +
Sbjct: 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 24/187 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRRE 89
           + I +RDLK EN +L+      +K+ DFG  K S+       T  GT  Y+APE+L R  
Sbjct: 140 KGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           ++ +  D WS G  +Y ML GA PF  +    N +KTI +I+  +  +P Y  ++Q+ R+
Sbjct: 198 HN-RAVDWWSLGALMYDMLTGAPPFTGE----NRKKTIDKILKCKLNLPPY--LTQEARD 250
Query: 150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFS--LQS 202
           LL ++   N + R+        E+++HP+F     R +    + +  RK  P F   LQS
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFF-----RHI--NWEELLARKVEPPFKPLLQS 303
Query: 203 VEEITKI 209
            E++++ 
Sbjct: 304 EEDVSQF 310

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I H DLK EN L     A ++KI DFG ++      + K   GTP ++APEV++  ++  
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN-YDFVS 266
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDCRNL 150
              D+WS GV  Y++L G  PF    D     +T++ I+A ++ + D  +  IS++ +  
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFLGDNDA----ETLNNILACRWDLEDEEFQDISEEAKEF 322
Query: 151 LSRIFVANPSRRITIKEIKSHPWF 174
           +S++ +   S RI+  E   HPW 
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWL 346

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRDLKL N  L+      +KI DFG  +K      R K+  GTP YIAPEVLS++ 
Sbjct: 140 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  ++ DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    +
Sbjct: 198 HSFEV-DVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPK--HINPVAAS 250
Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           L+ ++   +P+ R TI E+ +  +F
Sbjct: 251 LIQKMLQTDPTARPTINELLNDEFF 275

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRDLKL N  L+      +KI DFG  +K      R K+  GTP YIAPEVLS++ 
Sbjct: 136 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  ++ DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    +
Sbjct: 194 HSFEV-DVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPK--HINPVAAS 246
Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           L+ ++   +P+ R TI E+ +  +F
Sbjct: 247 LIQKMLQTDPTARPTINELLNDEFF 271

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 15/151 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      +K+ DFG SK ++ H +   S  GT  Y+APEV++R+
Sbjct: 148 SLGIIYRDLKPENILLD--EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +    AD WS GV ++ ML G+ PF+     K+ ++T++ I+  +  +P +  +S + +
Sbjct: 206 GHSHS-ADWWSYGVLMFEMLTGSLPFQG----KDRKETMTLILKAKLGMPQF--LSTEAQ 258
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +LL  +F  NP+ R+       +EIK H ++
Sbjct: 259 SLLRALFKRNPANRLGSGPDGAEEIKRHVFY 289

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRDLKL N  L+      +KI DFG  +K      R K+  GTP YIAPEVLS++ 
Sbjct: 136 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  ++ DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    +
Sbjct: 194 HSFEV-DVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPK--HINPVAAS 246
Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           L+ ++   +P+ R TI E+ +  +F
Sbjct: 247 LIQKMLQTDPTARPTINELLNDEFF 271

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 251
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWL 278

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 194 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 250
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 251 LDLVKKLLVVDPKARFTTEEALRHPWL 277

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 251
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWL 278

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 251
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWL 278

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 32  QICHRDLKLENTL-LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            + HRDLK EN L L  SP   LK+ DFG +         ++ VGTP Y++P+VL     
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE--GL 200
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDCR 148
            G   D WS GV +YV+L G  PF    D     + + +I    +  P  D++++S    
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNVSPQAE 256
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKNL---PREL 182
           +L+ R+   +P +RIT  +   H WF K L   PR L
Sbjct: 257 SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 293

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 201 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 257
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 258 LDLVKKLLVVDPKARFTTEEALRHPWL 284

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAP-RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I HRD+K EN LL+   +   +KI DFG S       + +  +GT  YIAPEVL +++
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KKK 223
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           Y+ K  DVWSCGV +Y++L G  PF  Q D    +  I ++   +Y     D+ +IS + 
Sbjct: 224 YNEK-CDVWSCGVIMYILLCGYPPFGGQND----QDIIKKVEKGKYYFDFNDWKNISDEA 278
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           + L+  +   + ++R T +E  +  W  K
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIKK 307

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 32  QICHRDLKLENTL-LDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            + HRDLK EN L L  SP   LK+ DFG +         ++ VGTP Y++P+VL     
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE--GL 183
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDCR 148
            G   D WS GV +YV+L G  PF    D     + + +I    +  P  D++++S    
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNVSPQAE 239
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKNL---PREL 182
           +L+ R+   +P +RIT  +   H WF K L   PR L
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 24/187 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-PKSTVGTPAYIAPEVLSRRE 89
           + I +RDLK EN +L+      +K+ DFG  K S+          GT  Y+APE+L R  
Sbjct: 140 KGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           ++ +  D WS G  +Y ML GA PF  +    N +KTI +I+  +  +P Y  ++Q+ R+
Sbjct: 198 HN-RAVDWWSLGALMYDMLTGAPPFTGE----NRKKTIDKILKCKLNLPPY--LTQEARD 250
Query: 150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFS--LQS 202
           LL ++   N + R+        E+++HP+F     R +    + +  RK  P F   LQS
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFF-----RHI--NWEELLARKVEPPFKPLLQS 303
Query: 203 VEEITKI 209
            E++++ 
Sbjct: 304 EEDVSQF 310

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRDLKL N  L+      +KI DFG  +K      R K   GTP YIAPEVLS++ 
Sbjct: 158 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  ++ DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    +
Sbjct: 216 HSFEV-DVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPK--HINPVAAS 268
Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           L+ ++   +P+ R TI E+ +  +F
Sbjct: 269 LIQKMLQTDPTARPTINELLNDEFF 293

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRDLKL N  L+      +KI DFG  +K      R K   GTP YIAPEVLS++ 
Sbjct: 160 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  ++ DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    +
Sbjct: 218 HSFEV-DVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPK--HINPVAAS 270
Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           L+ ++   +P+ R TI E+ +  +F
Sbjct: 271 LIQKMLQTDPTARPTINELLNDEFF 295

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++ HRDLKL N  L+      +KI DFG  +K      R K   GTP YIAPEVLS++ 
Sbjct: 134 NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  ++ DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    +
Sbjct: 192 HSFEV-DVWSIGCIMYTLLVGKPPFETS----CLKETYLRIKKNEYSIPK--HINPVAAS 244
Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           L+ ++   +P+ R TI E+ +  +F
Sbjct: 245 LIQKMLQTDPTARPTINELLNDEFF 269

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRRE 89
           + + +RDLKLEN +LD      +KI DFG  K  +      K+  GTP Y+APEVL   +
Sbjct: 268 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +  + ++
Sbjct: 326 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPRT--LGPEAKS 378
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVE 204
           LLS +   +P +R+       KEI  H +F   +        Q +Y +K +P F  Q   
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV-------WQHVYEKKLSPPFKPQVTS 431
Query: 205 E 205
           E
Sbjct: 432 E 432

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRRE 89
           + + +RDLKLEN +LD      +KI DFG  K  +      K+  GTP Y+APEVL   +
Sbjct: 271 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +  + ++
Sbjct: 329 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPRT--LGPEAKS 381
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVE 204
           LLS +   +P +R+       KEI  H +F   +        Q +Y +K +P F  Q   
Sbjct: 382 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV-------WQHVYEKKLSPPFKPQVTS 434
Query: 205 E 205
           E
Sbjct: 435 E 435

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           + ++ HRDLKL N  L+      +KI DFG  +K      R K+  GTP YIAPEVL ++
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  ++ D+WS G  LY +LVG  PFE        ++T  RI   +Y +P   HI+    
Sbjct: 218 GHSFEV-DIWSLGCILYTLLVGKPPFETS----CLKETYIRIKKNEYSVPR--HINPVAS 270
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
            L+ R+  A+P+ R ++ E+ +  +F
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFF 296

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
           S+ + HRD+K EN L+D       K+ DFG    +LLH  P +   GT  Y  PE +SR 
Sbjct: 157 SRGVVHRDIKDENILIDLRRG-CAKLIDFG--SGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           +Y    A VWS G+ LY M+ G  PFE DQE           I+  +   P   H+S DC
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQE-----------ILEAELHFP--AHVSPDC 260
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
             L+ R     PS R +++EI   PW 
Sbjct: 261 CALIRRCLAPKPSSRPSLEEILLDPWM 287

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 30  SQQICHRDLKLENTL-LDGSPAPR-LKICDFGYSKSSLLHSRPKSTVGTPAY----IAPE 83
           +Q + HRDLK  N L +D S  P  ++ICDFG++K           + TP Y    +APE
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL---RAENGLLXTPCYTANFVAPE 190
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YV 141
           VL R+ YD    D+WS GV LY  L G  PF +  D     + ++RI + ++ +    + 
Sbjct: 191 VLERQGYDAA-CDIWSLGVLLYTXLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWN 248
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
            +S   ++L+S+    +P +R+T   +  HPW +
Sbjct: 249 SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIV 282

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 334 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 390
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 391 LDLVKKLLVVDPKARFTTEEALRHPWL 417

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           + ++ HRDLKL N  L+      +KI DFG  +K      R K   GTP YIAPEVL ++
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  ++ D+WS G  LY +LVG  PFE        ++T  RI   +Y +P   HI+    
Sbjct: 218 GHSFEV-DIWSLGCILYTLLVGKPPFETS----CLKETYIRIKKNEYSVPR--HINPVAS 270
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
            L+ R+  A+P+ R ++ E+ +  +F
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFF 296

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 33  ICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           I HRDLK EN LL       L KI DFG+SK     S  ++  GTP Y+APEVL      
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 92  G--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPD-YVHISQDC 147
           G  +  D WS GV L++ L G  PF +     + +    +I + +Y  IP+ +  +S+  
Sbjct: 320 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWAEVSEKA 376
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +L+ ++ V +P  R T +E   HPW 
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWL 403

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           + ++ HRDLKL N  L+      +KI DFG  +K      R K   GTP YIAPEVL ++
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  ++ D+WS G  LY +LVG  PFE        ++T  RI   +Y +P   HI+    
Sbjct: 218 GHSFEV-DIWSLGCILYTLLVGKPPFETS----CLKETYIRIKKNEYSVPR--HINPVAS 270
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
            L+ R+  A+P+ R ++ E+ +  +F
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFF 296

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRRE 89
           + + +RDLKLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   +
Sbjct: 129 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +  + ++
Sbjct: 187 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKS 239
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVE 204
           LLS +   +P +R+       KEI  H +F   +        Q +Y +K +P F  Q   
Sbjct: 240 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV-------WQHVYEKKLSPPFKPQVTS 292
Query: 205 E 205
           E
Sbjct: 293 E 293

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           + ++ HRDLKL N  L+      +KI DFG  +K      R K   GTP YIAPEVL ++
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  ++ D+WS G  LY +LVG  PFE        ++T  RI   +Y +P   HI+    
Sbjct: 202 GHSFEV-DIWSLGCILYTLLVGKPPFETS----CLKETYIRIKKNEYSVPR--HINPVAS 254
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
            L+ R+  A+P+ R ++ E+ +  +F
Sbjct: 255 ALIRRMLHADPTLRPSVAELLTDEFF 280

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRRE 89
           + + +RDLKLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   +
Sbjct: 128 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +  + ++
Sbjct: 186 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKS 238
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVE 204
           LLS +   +P +R+       KEI  H +F   +        Q +Y +K +P F  Q   
Sbjct: 239 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV-------WQHVYEKKLSPPFKPQVTS 291
Query: 205 E 205
           E
Sbjct: 292 E 292

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRRE 89
           + + +RDLKLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   +
Sbjct: 130 KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +  + ++
Sbjct: 188 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILMEEIRFPR--TLGPEAKS 240
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVE 204
           LLS +   +P +R+       KEI  H +F   +        Q +Y +K +P F  Q   
Sbjct: 241 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV-------WQHVYEKKLSPPFKPQVTS 293
Query: 205 E 205
           E
Sbjct: 294 E 294

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K+  GTP Y+APEVL   
Sbjct: 123 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 233
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K+  GTP Y+APEVL   
Sbjct: 126 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 184 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 236
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 237 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 268

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K+  GTP Y+APEVL   
Sbjct: 123 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 233
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 16/169 (9%)
Query: 23  DIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAY 79
           D       +++ HRD+K EN L+       LKI DFG+S    +H+   R +   GT  Y
Sbjct: 126 DALHYCHERKVIHRDIKPENLLM--GYKGELKIADFGWS----VHAPSLRRRXMCGTLDY 179
Query: 80  IAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD 139
           + PE++  + +D K+ D+W  GV  Y  LVG  PF    D  +  +T  RI+ V  K P 
Sbjct: 180 LPPEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPF----DSPSHTETHRRIVNVDLKFPP 234
Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQA 188
           +  +S   ++L+S++   +P +R+ +K +  HPW   N  R L    Q+
Sbjct: 235 F--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQS 281

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 16/169 (9%)
Query: 23  DIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAY 79
           D       +++ HRD+K EN L+       LKI DFG+S    +H+   R +   GT  Y
Sbjct: 125 DALHYCHERKVIHRDIKPENLLM--GYKGELKIADFGWS----VHAPSLRRRXMCGTLDY 178
Query: 80  IAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD 139
           + PE++  + +D K+ D+W  GV  Y  LVG  PF    D  +  +T  RI+ V  K P 
Sbjct: 179 LPPEMIEGKTHDEKV-DLWCAGVLCYEFLVGMPPF----DSPSHTETHRRIVNVDLKFPP 233
Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQA 188
           +  +S   ++L+S++   +P +R+ +K +  HPW   N  R L    Q+
Sbjct: 234 F--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQS 280

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 32/159 (20%)
Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLS 86
           SQ + H+DLK EN L  D SP   +KI DFG ++  L  S   ST   GT  Y+APEV  
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE--LFKSDEHSTNAAGTALYMAPEVF- 198
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ----YKIPDYVH 142
           +R+   K  D+WS GV +Y +L G  PF           T + +  VQ    YK P+Y  
Sbjct: 199 KRDVTFK-CDIWSAGVVMYFLLTGCLPF-----------TGTSLEEVQQKATYKEPNY-- 244
Query: 143 ISQDCR-------NLLSRIFVANPSRRITIKEIKSHPWF 174
            + +CR       +LL ++   +P RR +  ++  H WF
Sbjct: 245 -AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   
Sbjct: 128 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 186 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 238
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 239 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 24  IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKSTVGTPAYIAP 82
           +FF   S+ I +RDLKL+N +LD      +KI DFG  K ++      K   GTP YIAP
Sbjct: 134 LFFLQ-SKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKXFCGTPDYIAP 190
Query: 83  EVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI-PDYV 141
           E+++ + Y GK  D W+ GV LY ML G  PFE +++ + F+  +   +A    +  + V
Sbjct: 191 EIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAV 249
Query: 142 HISQDCRNLLSRIFVANPSRRITI-----KEIKSHPWF 174
            I   C+ L+++    +P +R+       ++IK H +F
Sbjct: 250 AI---CKGLMTK----HPGKRLGCGPEGERDIKEHAFF 280

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   
Sbjct: 123 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 233
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   
Sbjct: 123 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 233
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +      K   GTP Y+APEVL   
Sbjct: 123 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S + +
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILMEEIRFPR--TLSPEAK 233
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFL 175
           +LL+ +   +P +R+       KE+  H +FL
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
               H DLK EN +     +  LK+ DFG +         K T GT  + APEV   +  
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDCR 148
            G   D+WS GV  Y++L G  PF  + D     +T+  + +  + + D  +  IS+D +
Sbjct: 228 -GYYTDMWSVGVLSYILLSGLSPFGGENDD----ETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
           + + ++ +A+P+ R+TI +   HPW 
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWL 308

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 17/152 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKSTVGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N +LD      +KI DFG  K ++      K   GTP YIAPE+++ +
Sbjct: 460 SKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI-PDYVHISQDC 147
            Y GK  D W+ GV LY ML G  PFE +++ + F+  +   +A    +  + V I   C
Sbjct: 518 PY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI---C 573
Query: 148 RNLLSRIFVANPSRRITI-----KEIKSHPWF 174
           + L+++    +P +R+       ++IK H +F
Sbjct: 574 KGLMTK----HPGKRLGCGPEGERDIKEHAFF 601

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 23  DIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAY 79
           D       +++ HRD+K EN LL       LKI DFG+S    +H+   R K+  GT  Y
Sbjct: 134 DALMYCHGKKVIHRDIKPENLLLGLKGE--LKIADFGWS----VHAPSLRRKTMCGTLDY 187
Query: 80  IAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD 139
           + PE++  R ++ K+ D+W  GV  Y +LVG  PFE     + +R    RI+ V  K P 
Sbjct: 188 LPPEMIEGRMHNEKV-DLWCIGVLCYELLVGNPPFESASHNETYR----RIVKVDLKFP- 241
Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETA 186
              +    ++L+S++   NPS R+ + ++ +HPW   N  R L  +A
Sbjct: 242 -ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPSA 287

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKL 94
           H DLK EN +     +  LK+ DFG +         K T GT  + APEV   +   G  
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV-GYY 336
Query: 95  ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDCRNLLS 152
            D+WS GV  Y++L G  PF  + D +  R     + +  + + D  +  IS+D ++ + 
Sbjct: 337 TDMWSVGVLSYILLSGLSPFGGENDDETLRN----VKSCDWNMDDSAFSGISEDGKDFIR 392
Query: 153 RIFVANPSRRITIKEIKSHPWF 174
           ++ +A+P+ R+TI +   HPW 
Sbjct: 393 KLLLADPNTRMTIHQALEHPWL 414

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           S  + HRD+K +N LLD      LK+ DFG      ++ ++H    + VGTP YI+PEVL
Sbjct: 192 SMGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDETGMVHC--DTAVGTPDYISPEVL 247
Query: 86  SRREYDG---KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDY 140
             +  DG   +  D WS GV L+ MLVG  PF       +   T S+IM  +  +  P+ 
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY----ADSLVGTYSKIMDHKNSLCFPED 303
Query: 141 VHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             IS+  +NL+         R  R  ++EIK HP+F
Sbjct: 304 AEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF 339

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
           S  I +RDLK EN LLD      + + DFG  K ++ H+   ST  GTP Y+APEVL ++
Sbjct: 157 SLNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            YD +  D W  G  LY ML G  PF  +   + +   +++ + ++       +I+   R
Sbjct: 215 PYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK------PNITNSAR 267
Query: 149 NLLSRIFVANPSRRITIK----EIKSHPWF 174
           +LL  +   + ++R+  K    EIKSH +F
Sbjct: 268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           S    HRD+K +N LLD S    LK+ DFG     +K  ++  R  + VGTP YI+PEVL
Sbjct: 191 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVL 246
Query: 86  SRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDY 140
             +    Y G+  D WS GV LY MLVG  PF       +   T S+IM  +  +  PD 
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDD 302
Query: 141 VHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             IS++ +NL+         R  R  ++EIK H +F
Sbjct: 303 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 338

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           S    HRD+K +N LLD S    LK+ DFG     +K  ++  R  + VGTP YI+PEVL
Sbjct: 186 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVL 241
Query: 86  SRRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDY 140
             +    Y G+  D WS GV LY MLVG  PF       +   T S+IM  +  +  PD 
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDD 297
Query: 141 VHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             IS++ +NL+         R  R  ++EIK H +F
Sbjct: 298 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 333

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           S    HRD+K +N LLD S    LK+ DFG     +K  ++  R  + VGTP YI+PEVL
Sbjct: 191 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVL 246
Query: 86  SRREYDG---KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDY 140
             +  DG   +  D WS GV LY MLVG  PF       +   T S+IM  +  +  PD 
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY----ADSLVGTYSKIMNHKNSLTFPDD 302
Query: 141 VHISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             IS++ +NL+         R  R  ++EIK H +F
Sbjct: 303 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 338

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            + I +RDLKL+N LLD       K+ DFG  K  + +    +T  GTP YIAPE+L   
Sbjct: 142 DKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y G   D W+ GV LY ML G  PFE + +   F      I+  +   P ++H  +D  
Sbjct: 200 LY-GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILNDEVVYPTWLH--EDAT 252
Query: 149 NLLSRIFVANPSRRITI------KEIKSHPWF 174
            +L      NP+ R+          I  HP+F
Sbjct: 253 GILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 28/177 (15%)
Query: 30  SQQICHRDLKLENTLLDGSP--APRLKICDFGYSKSSLLHSR--PKST------VGTPAY 79
           ++ I HRDLK EN L + SP     +KICDF       L++   P +T       G+  Y
Sbjct: 129 TKGIAHRDLKPENILCE-SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 80  IAPEVL----SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ--EDPKNFRKTISR---- 129
           +APEV+     +  +  K  D+WS GV LY+ML G  PF      D    R  + R    
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 130 -----IMAVQYKIPD--YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
                I   +Y+ PD  + HIS + ++L+S++ V +  +R++  ++  HPW     P
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAP 304

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R K  VGTP ++APE++S
Sbjct: 265 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 320
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 321 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLK--NLHKVSPS 376
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-----SRPKSTVGTPAYIAPEV 84
           SQ I H+D+K  N LL  +    LKI   G +++  LH        +++ G+PA+  PE+
Sbjct: 127 SQGIVHKDIKPGNLLL--TTGGTLKISALGVAEA--LHPFAADDTCRTSQGSPAFQPPEI 182
Query: 85  LSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
            +  + + G   D+WS GVTLY +  G YPFE      N  K    I    Y IP     
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD----NIYKLFENIGKGSYAIPG---- 234
Query: 144 SQDC----RNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
             DC     +LL  +    P++R +I++I+ H WF K  P
Sbjct: 235 --DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 241
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R K  VGTP ++APE++S
Sbjct: 188 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 243
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 244 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLK--NLHKVSPS 299
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 241
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 5   VSSLSEFVMLEGSVK--MKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRLKI 55
           V  L +F+   G+++  +    F+  L       +  + HRD+K EN L+D +    LK+
Sbjct: 94  VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRG-ELKL 152
Query: 56  CDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFE 115
            DFG S + L  +      GT  Y  PE +    Y G+ A VWS G+ LY M+ G  PFE
Sbjct: 153 IDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
Query: 116 DQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
             E+             ++ ++     +S +C++L+       PS R T +EI++HPW  
Sbjct: 212 HDEE------------IIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
Query: 176 KN-LPRELTE 184
              LP+E  E
Sbjct: 260 DVLLPQETAE 269

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 135 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 240
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 273

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 135 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 240
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 273

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 241
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 134 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 191
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 192 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 239
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 240 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 272

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 158 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 215
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 216 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSXECQHLIR 263
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 264 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 296

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 236
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 283
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 283
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 150 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 255
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 288

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 150 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSXECQHLIR 255
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 288

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R K  VGTP ++APE++S
Sbjct: 143 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 198
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 199 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLK--NLHKVSPS 254
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 287

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   E  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 170 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 227
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 228 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 275
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 308

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SSECQHLIR 269
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SSECQHLIR 268
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSXECQHLIR 256
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 289

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSXECQHLIR 283
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 268
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SXECQHLIR 269
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SSECQHLIR 268
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 183 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 240
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 241 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSXECQHLIR 288
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 289 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 321

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSSECQHLIR 256
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 289

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SSECQHLIR 236
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SSECQHLIR 269
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R K  VGTP ++APE++S
Sbjct: 145 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 200
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 201 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLK--NLHKVSPS 256
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 289

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SXECQHLIR 269
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+          I+  Q      V  S +C++L+ 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQRV--SXECQHLIR 268
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 PS R T +EI++HPW     LP+E  E
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R  +  GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 310

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R K  VGTP ++APE++S
Sbjct: 134 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 189
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 190 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLK--NLHKVSPS 245
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    R K  VGTP ++APE++S
Sbjct: 138 AQGVIHRDIKSDSILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 193
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ + E P    K I   +  + K  +   +S  
Sbjct: 194 RLPY-GPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLK--NLHKVSPS 249
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +  L R+ V +P++R T  E+  HP+  K  P
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 282

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLAGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R  +  GTP Y+APE++  + 
Sbjct: 145 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKG 200
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 201 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 253
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 254 LLRNLLQVDLTKRFGNLKDGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 300

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 310

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 310

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 310

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLMID--QQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 180 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 235
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 236 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 288
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 289 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 335

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV----GTPAYIAPEVLSRR 88
           I +RDLKL+N LLD      +K+ D+G  K  L   RP  T     GTP YIAPE+L   
Sbjct: 174 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGL---RPGDTTSTFCGTPNYIAPEILRGE 228
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +Y G   D W+ GV ++ M+ G  PF+     D  D          I+  Q +IP    +
Sbjct: 229 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSL 285
Query: 144 SQDCRNLLSRIFVANPSRRI------TIKEIKSHPWFLKNLPRELTETAQAI 189
           S    ++L      +P  R+         +I+ HP+F +N+  ++ E  Q +
Sbjct: 286 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMMEQKQVV 336

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLXGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV----GTPAYIAPEVLSRR 88
           I +RDLKL+N LLD      +K+ D+G  K  L   RP  T     GTP YIAPE+L   
Sbjct: 142 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGL---RPGDTTSXFCGTPNYIAPEILRGE 196
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +Y G   D W+ GV ++ M+ G  PF+     D  D          I+  Q +IP  + +
Sbjct: 197 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSV 255
Query: 144 SQDCRNLLSRIFVANPSRRI------TIKEIKSHPWFLKNLPRELTETAQAI 189
                ++L      +P  R+         +I+ HP+F +N+  ++ E  Q +
Sbjct: 256 K--AASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF-RNVDWDMMEQKQVV 304

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV----GTPAYIAPEVLSRR 88
           I +RDLKL+N LLD      +K+ D+G  K  L   RP  T     GTP YIAPE+L   
Sbjct: 127 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGL---RPGDTTSXFCGTPNYIAPEILRGE 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +Y G   D W+ GV ++ M+ G  PF+     D  D          I+  Q +IP    +
Sbjct: 182 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSL 238
Query: 144 SQDCRNLLSRIFVANPSRRI------TIKEIKSHPWFLKNLPRELTETAQAI 189
           S    ++L      +P  R+         +I+ HP+F +N+  ++ E  Q +
Sbjct: 239 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMMEQKQVV 289

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLPNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 310

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV----GTPAYIAPEVLSRR 88
           I +RDLKL+N LLD      +K+ D+G  K  L   RP  T     GTP YIAPE+L   
Sbjct: 131 IIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGL---RPGDTTSXFCGTPNYIAPEILRGE 185
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE-----DQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +Y G   D W+ GV ++ M+ G  PF+     D  D          I+  Q +IP    +
Sbjct: 186 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSL 242
Query: 144 SQDCRNLLSRIFVANPSRRI------TIKEIKSHPWFLKNLPRELTETAQAI 189
           S    ++L      +P  R+         +I+ HP+F +N+  ++ E  Q +
Sbjct: 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMMEQKQVV 293

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 180 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 235
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 236 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 288
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 289 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 335

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 154 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 209
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 210 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 262
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 263 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 309

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKDGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 146 SLDLIYRDLKPENLLID--EQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 202 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 254
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 255 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 301

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKSTVGTPAYIAPEVLSRREYD 91
           I +RDLKL+N +LD      +KI DFG  K  ++     +   GTP YIAPE+++ + Y 
Sbjct: 141 IIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY- 197
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           GK  D W+ GV LY ML G  PF+ +++ + F+     IM      P    +S++  ++ 
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS----IMEHNVSYPK--SLSKEAVSIC 251
Query: 152 SRIFVANPSRRITI-----KEIKSHPWF 174
             +   +P++R+       ++++ H +F
Sbjct: 252 KGLMTKHPAKRLGCGPEGERDVREHAFF 279

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 152 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 207
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 208 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 260
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 261 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 307

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKDGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APEV+S
Sbjct: 159 NQGVIHRDIKSDSILLTSDG----RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  Y G   D+WS G+ +  M+ G  P+ ++   +  R+      ++  ++ D   +S  
Sbjct: 215 RLPY-GTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD---SLPPRVKDLHKVSSV 270
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R  L  + V  PS+R T +E+  HP FLK
Sbjct: 271 LRGFLDLMLVREPSQRATAQELLGHP-FLK 299

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 152 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 207
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 208 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 260
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 261 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 307

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKDGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKDGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 31  QQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             I H DLK +N LL    P   +KI DFG S+        +  +GTP Y+APE+L+   
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN--- 206
Query: 90  YD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           YD      D+W+ G+  Y++L    PF  +++ + +   IS++  V Y    +  +SQ  
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN-ISQV-NVDYSEETFSSVSQLA 264
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF----LKNL--PRELTETAQA 188
            + +  + V NP +R T +   SH W      +NL  P E + ++Q 
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQT 311

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRD+K EN L+D +    LK+ DFG S + L  +      GT  Y  PE +    Y G
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS 152
           + A VWS G+ LY M+ G  PFE  E+             ++ ++     +S +C++L+ 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQVFFRQRVSXECQHLIR 256
Query: 153 RIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
                 P  R T +EI++HPW     LP+E  E
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWMQDVLLPQETAE 289

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHS--RPKST------VGTPAYI 80
           ++ I HRDLK EN L +  +    +KICDFG      L+    P ST       G+  Y+
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 81  APEVLSRRE-----YDGKLADVWSCGVTLYVMLVGAYPF-----------EDQEDPKNFR 124
           APEV+         YD K  D+WS GV LY++L G  PF             +  P    
Sbjct: 189 APEVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 125 KTISRIMAVQYKIPD--YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
                I   +Y+ PD  + HIS   ++L+S++ V +  +R++  ++  HPW     P   
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
Query: 183 TET 185
             T
Sbjct: 308 LPT 310

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLMID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++R       + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLIID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIIISKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +K+ DFG +K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLMID--QQGYIKVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRREY 90
           + HRDLK EN L  D +    +KI DFG+++     ++P K+   T  Y APE+L++  Y
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-----YKIPDYVHISQ 145
           D +  D+WS GV LY ML G  PF+  +        +  +  ++     ++   + ++SQ
Sbjct: 187 D-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQ 245
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           + ++L+  +   +P++R+ +  ++ + W 
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +     +  GTP Y+APE++  + 
Sbjct: 180 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGATWTLCGTPEYLAPEIILSKG 235
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 236 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 288
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 289 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 335

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 20/175 (11%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+ ++ S    + K  VGTP ++APEV+S
Sbjct: 159 AQGVIHRDIKSDSILLTLDG----RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYP-FEDQ--EDPKNFRKTISRIMAVQYKIPDYVHI 143
           R  Y  ++ D+WS G+ +  M+ G  P F D   +  K  R +    +   +K      +
Sbjct: 215 RSLYATEV-DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHK------V 267
Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK-NLPRELTETAQAIYYRKENPT 197
           S   R+ L R+ V +P  R T +E+  HP+ L+  LP  L    Q   YRK+  T
Sbjct: 268 SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQ--LYRKQTST 320

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 160 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 215
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 268
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +I +H WF        T    AIY RK    F
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIXNHKWF-------ATTDWIAIYQRKVEAPF 315

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+AP ++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPAIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSR-----RITIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           LL  +   + ++     +  + +IK+H WF        T    AIY RK
Sbjct: 268 LLRNLLQVDLTKAFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRK 309

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN ++D      +++ DFG +K   +  R     GTP Y+APE++  + 
Sbjct: 159 SLDLIYRDLKPENLMID--QQGYIQVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K   +  R     GTP  +APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEALAPEIILSKG 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+ K  D W+ GV +Y M  G  PF   +  + + K +S     + + P   H S D ++
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRFPS--HFSSDLKD 267
Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF 198
           LL  +   + ++R       + +IK+H WF        T    AIY RK    F
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF-------ATTDWIAIYQRKVEAPF 314

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 28/183 (15%)
Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHS--RPKST------VGTPAYI 80
           ++ I HRDLK EN L +  +    +KICDF       L+    P ST       G+  Y+
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 81  APEVLSRRE-----YDGKLADVWSCGVTLYVMLVGAYPF-----------EDQEDPKNFR 124
           APEV+         YD K  D+WS GV LY++L G  PF             +  P    
Sbjct: 189 APEVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 125 KTISRIMAVQYKIPD--YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
                I   +Y+ PD  + HIS   ++L+S++ V +  +R++  ++  HPW     P   
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
Query: 183 TET 185
             T
Sbjct: 308 LPT 310

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 124 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-------KIPDYVHI 143
             + +D+WS G++L  M VG YP    +  ++ R  ++    + Y       K+P  V  
Sbjct: 181 SVQ-SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGV-F 238
Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           S + ++ +++  + NP+ R  +K++  H +  ++   E+
Sbjct: 239 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 277

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE- 89
           + ICHRD+K  N L+D +   R+K+ DFG S+  ++  + K + GT  ++ PE  S    
Sbjct: 171 KNICHRDVKPSNILMDKNG--RVKLSDFGESEY-MVDKKIKGSRGTYEFMPPEFFSNESS 227
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQ----EDPKNFR-KTISRIMAVQYKIPDYVHIS 144
           Y+G   D+WS G+ LYVM     PF  +    E   N R K I   +   + +    +  
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287
Query: 145 QDC-RNLLS-------RIFV-ANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKE 194
             C  N LS       ++F+  NP+ RIT ++   H W       +L E ++ +Y +++
Sbjct: 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKRK 346

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 30  SQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +                     +  
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET---------------------TGE 173
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 174 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 232
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTETAQAIYYRKE 194
            + L+  +    P++R+TI E  +HPW +++  +P+    T++ +   KE
Sbjct: 233 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 282

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
             I H D+K EN + +   A  +KI DFG +         K T  T  + APE++  RE 
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD-REP 226
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDCR 148
            G   D+W+ GV  YV+L G  PF  ++D     +T+  +    ++  +  +  +S + +
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETLQNVKRCDWEFDEDAFSSVSPEAK 282
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
           + +  +    P +R+T+ +   HPW LK     LT    +  Y K
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPW-LKGDHSNLTSRIPSSRYNK 326

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R  S VGT  Y++PE+L+
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 208 EKS-ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R  S VGT  Y++PE+L+
Sbjct: 147 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 205 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 257
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 258 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R  S VGT  Y++PE+L+
Sbjct: 151 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 209 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 261
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 262 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 189
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 190 RKAY-GPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 245
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  H  FLK
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQ-FLK 274

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+    VGTP ++APEV++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT 189
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 190 RKAY-GPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 245
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  H  FLK
Sbjct: 246 FRDFLNRCLEMDVEKRGSAKELLQHQ-FLK 274

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 87/158 (55%), Gaps = 17/158 (10%)
Query: 31  QQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVL 85
           ++I HRD+K +N  L  DG+    +++ DFG ++  +L+S     ++ +GTP Y++PE+ 
Sbjct: 144 RKILHRDIKSQNIFLTKDGT----VQLGDFGIAR--VLNSTVELARACIGTPYYLSPEIC 197
Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
             + Y+ K +D+W+ G  LY +    + FE      + +  + +I++  +  P  +H S 
Sbjct: 198 ENKPYNNK-SDIWALGCVLYELCTLKHAFE----AGSMKNLVLKIISGSFP-PVSLHYSY 251
Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT 183
           D R+L+S++F  NP  R ++  I    +  K + + L+
Sbjct: 252 DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLS 289

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+    VGTP ++APEV++
Sbjct: 135 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT 190
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 191 RKAY-GPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 246
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  H  FLK
Sbjct: 247 FRDFLNRCLEMDVEKRGSAKELIQHQ-FLK 275

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGY-SKSSLLHSRPKSTVGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DGS    +K+ DFG+ ++ +   S+    VGTP ++APEV++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVT 189
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 190 RKAY-GPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 245
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  H  FLK
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQ-FLK 274

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R  + VGT  Y++PE+L+
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I H D++ EN +     +  +KI +FG ++        +     P Y APEV  + +
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHD 178
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDC 147
                 D+WS G  +YV+L G  PF  + +    ++ I  IM  +Y   +  +  IS + 
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETN----QQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRK 193
            + + R+ V     R+T  E   HPW  + + R  T+  + + +R+
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRR 280

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F    ++I+ ++Y  P+       
Sbjct: 208 EKSAX-KSSDLWALGCIIYQLVAGLPPFRAGNEGLIF----AKIIKLEYDFPE--KFFPK 260
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 143 HKIMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 199
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-QYKIPDYVHISQDCRN 149
             + +D+WS G++L  M VG YP           + +  I+     K+P  V  S + ++
Sbjct: 200 SVQ-SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGV-FSLEFQD 257
Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
            +++  + NP+ R  +K++  H +  ++   E+
Sbjct: 258 FVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 290

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 151 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 209 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 261
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 262 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+    Y
Sbjct: 305 ERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV--HISQDCR 148
                D W+ G  LY M+ G  PF+ Q   K  R+ + R++    ++P+      S   R
Sbjct: 363 TFS-PDWWALGCLLYEMIAGQSPFQ-QRKKKIKREEVERLVK---EVPEEYSERFSPQAR 417
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLK 176
           +L S++   +P+ R+     + +E+K HP F K
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLS 86
           S Q+ HR++K +N LL  DGS    +K+ DFG+          +ST VGTP ++APEV++
Sbjct: 135 SNQVIHRNIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 190
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ Y G   D+WS G+    M+ G  P+ + E+P      I+     + + P+   +S  
Sbjct: 191 RKAY-GPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAI 246
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            R+ L+R    +  +R + KE+  H  FLK
Sbjct: 247 FRDFLNRCLEMDVEKRGSAKELIQHQ-FLK 275

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 155 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 213 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 265
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 266 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 299

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 147 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 205 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 257
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 258 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 132 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 190 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 242
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 243 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 276

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 125 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 183 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 235
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 236 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 126 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 184 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 236
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F    ++I+ ++Y  P+       
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF----AKIIKLEYDFPE--KFFPK 260
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 127 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 185 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 237
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 238 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 128 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 186 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 238
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 239 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           ++I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+    Y
Sbjct: 305 ERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV--HISQDCR 148
                D W+ G  LY M+ G  PF+ Q   K  R+ + R++    ++P+      S   R
Sbjct: 363 TFS-PDWWALGCLLYEMIAGQSPFQ-QRKKKIKREEVERLVK---EVPEEYSERFSPQAR 417
Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLK 176
           +L S++   +P+ R+     + +E+K HP F K
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 18/154 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K        +R    VGT  Y++PE+L+
Sbjct: 153 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P        
Sbjct: 211 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFP--AAFFPK 263
Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 264 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 297

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--RPKSTVGTPAYIAPEVLSRRE- 89
           I +RD+KLEN LLD +    + + DFG SK  +     R     GT  Y+AP+++   + 
Sbjct: 180 IIYRDIKLENILLDSNG--HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS 237
Query: 90  -YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +D K  D WS GV +Y +L GA PF   +  KN +  ISR + ++ + P    +S   +
Sbjct: 238 GHD-KAVDWWSLGVLMYELLTGASPFT-VDGEKNSQAEISRRI-LKSEPPYPQEMSALAK 294
Query: 149 NLLSRIFVANPSRRIT-----IKEIKSHPWFLK 176
           +L+ R+ + +P +R+        EIK H +F K
Sbjct: 295 DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV--GTPAYIAPEVLSRREYD- 91
           HRD+K +N L+D +   RL   DFG     +     +S+V  GTP YI+PE+L   E   
Sbjct: 198 HRDIKPDNILMDMNGHIRLA--DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 92  ---GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV-HISQDC 147
              G   D WS GV +Y ML G  PF  +   + + K ++     +++ P  V  +S++ 
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH--KERFQFPTQVTDVSENA 313
Query: 148 RNLLSRIFVANPSR--RITIKEIKSHPWF 174
           ++L+ R+  +   R  +  I++ K HP+F
Sbjct: 314 KDLIRRLICSREHRLGQNGIEDFKKHPFF 342

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSR- 87
             QI HRD+K +N L++ + +  LKI DFG SK  + ++   ++  GT  Y+APE++ + 
Sbjct: 140 DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 88  -REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            R Y GK AD+WS G T+  M  G  PF +  +P+     +  +  V  +IP+   +S +
Sbjct: 199 PRGY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIPE--SMSAE 254
Query: 147 CRNLLSRIFVANPSRRITIKEI 168
            +  + + F  +P +R    ++
Sbjct: 255 AKAFILKCFEPDPDKRACANDL 276

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L   E
Sbjct: 308 RNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQD-C 147
           YD  + D ++ GVTLY M+    PF  + +    ++   R++      PD +   S+D C
Sbjct: 366 YDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFC 424
Query: 148 RNLLSRIFVANPSRRITIKE-----IKSHPWF 174
             LL +    +P +R+  ++     +++HP F
Sbjct: 425 EALLQK----DPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L   E
Sbjct: 308 RNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQD-C 147
           YD  + D ++ GVTLY M+    PF  + +    ++   R++      PD +   S+D C
Sbjct: 366 YDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFC 424
Query: 148 RNLLSRIFVANPSRRITIKE-----IKSHPWF 174
             LL +    +P +R+  ++     +++HP F
Sbjct: 425 EALLQK----DPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSR- 87
             QI HRD+K +N L++ + +  LKI DFG SK  + ++   ++  GT  Y+APE++ + 
Sbjct: 126 DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 88  -REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            R Y GK AD+WS G T+  M  G  PF +  +P+     +  +  V  +IP+   +S +
Sbjct: 185 PRGY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIPE--SMSAE 240
Query: 147 CRNLLSRIFVANPSRRITIKEI 168
            +  + + F  +P +R    ++
Sbjct: 241 AKAFILKCFEPDPDKRACANDL 262

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L   E
Sbjct: 308 RNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQD-C 147
           YD  + D ++ GVTLY M+    PF  + +    ++   R++      PD +   S+D C
Sbjct: 366 YDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFC 424
Query: 148 RNLLSRIFVANPSRRITIKE-----IKSHPWF 174
             LL +    +P +R+  ++     +++HP F
Sbjct: 425 EALLQK----DPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           + I +RDLK EN LLD      ++I D G + +     ++ K   GTP ++APE+L   E
Sbjct: 308 RNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YVHISQD-C 147
           YD  + D ++ GVTLY M+    PF  + +    ++   R++      PD +   S+D C
Sbjct: 366 YDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFC 424
Query: 148 RNLLSRIFVANPSRRITIKE-----IKSHPWF 174
             LL +    +P +R+  ++     +++HP F
Sbjct: 425 EALLQK----DPEKRLGFRDGSCDGLRTHPLF 452

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 27/156 (17%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPEVLSRR 88
           HRD+K +N LLD +   RL   DFG    S L      TV      GTP YI+PE+L   
Sbjct: 214 HRDIKPDNVLLDVNGHIRL--ADFG----SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 89  EYD----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--YKIPDYV- 141
           E      G   D WS GV +Y ML G  PF      ++  +T  +IM  +  ++ P +V 
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQFPSHVT 323
Query: 142 HISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWF 174
            +S++ ++L+ R+ + +  RR+    I++ K H +F
Sbjct: 324 DVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF 358

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 27/156 (17%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPEVLSRR 88
           HRD+K +N LLD +   RL   DFG    S L      TV      GTP YI+PE+L   
Sbjct: 198 HRDIKPDNVLLDVNGHIRL--ADFG----SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 89  EYD----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--YKIPDYV- 141
           E      G   D WS GV +Y ML G  PF      ++  +T  +IM  +  ++ P +V 
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQFPSHVT 307
Query: 142 HISQDCRNLLSRIFVANPSRRI---TIKEIKSHPWF 174
            +S++ ++L+ R+ + +  RR+    I++ K H +F
Sbjct: 308 DVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF 342

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
Query: 35  HRDLKLENTLL--DGSPAPRLKICDFGYSK-----SSLLHSRPKST-VGTPAYIAPEVLS 86
           HRD+K  N LL  DGS    ++I DFG S        +  ++ + T VGTP ++APEV+ 
Sbjct: 144 HRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 87  R-REYDGKLADVWSCGVTLYVMLVGAYPFED-----------QEDPKNFRKTI-SRIMAV 133
           + R YD K AD+WS G+T   +  GA P+             Q DP +    +  + M  
Sbjct: 200 QVRGYDFK-ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 258
Query: 134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE 184
           +Y         +  R ++S     +P +R T  E+  H +F K   +E  +
Sbjct: 259 KY--------GKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQ 301

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVL----S 86
           +I HRD+K  N LLD S    +K+CDFG S   L+ S  K+   G   Y+APE +    S
Sbjct: 146 KIIHRDIKPSNILLDRSG--NIKLCDFGIS-GQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ YD + +DVWS G+TLY +  G +P+     PK +     ++  V    P  +  S++
Sbjct: 203 RQGYDVR-SDVWSLGITLYELATGRFPY-----PK-WNSVFDQLTQVVKGDPPQLSNSEE 255
Query: 147 CR------NLLSRIFVANPSRRITIKEIKSHPWFL 175
                   N ++     + S+R   KE+  HP+ L
Sbjct: 256 REFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL 290

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+       VGT +Y++PE L    Y
Sbjct: 127 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDEMANEFVGTRSYMSPERLQGTHY 183
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-------KIPDYVHI 143
             + +D+WS G++L  M VG YP          R  ++    + Y       K+P  V  
Sbjct: 184 SVQ-SDIWSMGLSLVEMAVGRYP----------RPPMAIFELLDYIVNEPPPKLPSAV-F 231
Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
           S + ++ +++  + NP+ R  +K++  H +  ++   E+
Sbjct: 232 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 270

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            QI HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y+APE L    Y
Sbjct: 134 HQIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMAPERLQGTHY 190
Query: 91  DGKLADVWSCGVTLYVMLVGAYPF 114
             + +D+WS G++L  + VG YP 
Sbjct: 191 SVQ-SDIWSMGLSLVELAVGRYPI 213

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK--STVGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K  + VGTP ++APEV+ +
Sbjct: 138 SEKKIHRDIKAANVLL--SEQGDVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQED-------PKNFRKTISRIMAVQYKIPDY 140
             YD K AD+WS G+T   +  G  P  D          PKN   T+         + D+
Sbjct: 195 SAYDSK-ADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTL---------VGDF 244
Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
              ++  +  +      +PS R T KE+  H + +KN
Sbjct: 245 ---TKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 278

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 35  HRDLKLENTLL--DGSPAPRLKICDFGYSK-----SSLLHSRPKST-VGTPAYIAPEVLS 86
           HRD+K  N LL  DGS    ++I DFG S        +  ++ + T VGTP ++APEV+ 
Sbjct: 139 HRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 87  R-REYDGKLADVWSCGVTLYVMLVGAYPFED-----------QEDPKNFRKTI-SRIMAV 133
           + R YD K AD+WS G+T   +  GA P+             Q DP +    +  + M  
Sbjct: 195 QVRGYDFK-ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 253
Query: 134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           +Y         +  R ++S     +P +R T  E+  H +F K
Sbjct: 254 KY--------GKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 22/147 (14%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK---STVGTPAYIAPEVLSR 87
           + I HRD+K EN ++  +    +K+ DFG   S+    R K   +  GT  Y APEVL  
Sbjct: 149 KDIIHRDIKDENIVI--AEDFTIKLIDFG---SAAYLERGKLFYTFCGTIEYCAPEVLMG 203
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI-PDYVHISQD 146
             Y G   ++WS GVTLY ++    PF + E+             V+  I P Y+ +S++
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEE------------TVEAAIHPPYL-VSKE 250
Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPW 173
             +L+S +    P RR T++++ + PW
Sbjct: 251 LMSLVSGLLQPVPERRTTLEKLVTDPW 277

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 151 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 207
Query: 91  DGKLADVWSCGVTLYVMLVGAYP 113
             + +D+WS G++L  M VG YP
Sbjct: 208 SVQ-SDIWSMGLSLVEMAVGRYP 229

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 186 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 242
Query: 91  DGKLADVWSCGVTLYVMLVGAYPF 114
             + +D+WS G++L  M VG YP 
Sbjct: 243 SVQ-SDIWSMGLSLVEMAVGRYPI 265

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 12  VMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--SR 69
           VM + ++ +K     S     + HRDLK  N  LDG     +K+ DFG ++  L H  S 
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARI-LNHDTSF 172
Query: 70  PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP---FEDQEDPKNFRKT 126
            K+ VGTP Y++PE ++R  Y+ K +D+WS G  LY +     P   F  +E     R+ 
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 127 ISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
             R +  +Y        S +   +++R+       R +++EI  +P  L+
Sbjct: 232 KFRRIPYRY--------SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 12  VMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--SR 69
           VM + ++ +K     S     + HRDLK  N  LDG     +K+ DFG ++  L H  S 
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARI-LNHDTSF 172
Query: 70  PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP---FEDQEDPKNFRKT 126
            K+ VGTP Y++PE ++R  Y+ K +D+WS G  LY +     P   F  +E     R+ 
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 127 ISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
             R +  +Y        S +   +++R+       R +++EI  +P  L+
Sbjct: 232 KFRRIPYRY--------SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 124 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 91  DGKLADVWSCGVTLYVMLVGAYPF 114
             + +D+WS G++L  M VG YP 
Sbjct: 181 SVQ-SDIWSMGLSLVEMAVGRYPI 203

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 124 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 91  DGKLADVWSCGVTLYVMLVGAYPF 114
             + +D+WS G++L  M VG YP 
Sbjct: 181 SVQ-SDIWSMGLSLVEMAVGRYPI 203

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 124 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 91  DGKLADVWSCGVTLYVMLVGAYP 113
             + +D+WS G++L  M VG YP
Sbjct: 181 SVQ-SDIWSMGLSLVEMAVGRYP 202

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 124 HKIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 91  DGKLADVWSCGVTLYVMLVGAYP 113
             + +D+WS G++L  M VG YP
Sbjct: 181 SVQ-SDIWSMGLSLVEMAVGRYP 202

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 26  FSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPE 83
            S L Q ++ HRD+K +N LL  +    +K+ DFG S        R  + +GTP ++APE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 199
Query: 84  VLSRRE-----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP 138
           V++  E     YD K +D+WS G+T   M  GA P  D   P      I R  A + K  
Sbjct: 200 VIACDENPDATYDFK-SDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSK 257
Query: 139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
            +   S+  ++ +    V N S+R   +++  HP F+++ P E
Sbjct: 258 KW---SKKFQSFIESCLVKNHSQRPATEQLMKHP-FIRDQPNE 296

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 7   SLSEFVMLEGSVKMKPDIFFS---------SLSQQICHRDLKLENTLLDGSPAPRLKICD 57
           +LSE++   G + +   I F+         +   +I HRD+K +N L+D +    LKI D
Sbjct: 97  TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT--LKIFD 154
Query: 58  FGYSK--SSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFE 115
           FG +K  S    ++    +GT  Y +PE  ++ E   +  D++S G+ LY MLVG  PF 
Sbjct: 155 FGIAKALSETSLTQTNHVLGTVQYFSPE-QAKGEATDECTDIYSIGIVLYEMLVGEPPF- 212
Query: 116 DQEDPKNFRKTIS-RIMAVQYKIPDYV-----HISQDCRNLLSRIFVANPSRRI-TIKEI 168
                 N    +S  I  +Q  +P+        I Q   N++ R    + + R  TI+E+
Sbjct: 213 ------NGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
Query: 169 KS 170
           K 
Sbjct: 267 KD 268

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK--STVGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K  + VGTP ++APEV+ +
Sbjct: 142 SEKKIHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY------V 141
             YD K AD+WS G+T   +  G  P  +              M V + IP         
Sbjct: 199 SAYDSK-ADIWSLGITAIELARGEPPHSELHP-----------MKVLFLIPKNNPPTLEG 246
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           + S+  +  +       PS R T KE+  H + L+N
Sbjct: 247 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 282

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 12  VMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-- 69
           VM + ++ +K     S     + HRDLK  N  LDG     +K+ DFG ++  L H    
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARI-LNHDEDF 172
Query: 70  PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP---FEDQEDPKNFRKT 126
            K  VGTP Y++PE ++R  Y+ K +D+WS G  LY +     P   F  +E     R+ 
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 127 ISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
             R +  +Y        S +   +++R+       R +++EI  +P  L+
Sbjct: 232 KFRRIPYRY--------SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK--STVGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K  + VGTP ++APEV+ +
Sbjct: 122 SEKKIHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY------V 141
             YD K AD+WS G+T   +  G  P  +              M V + IP         
Sbjct: 179 SAYDSK-ADIWSLGITAIELARGEPPHSELHP-----------MKVLFLIPKNNPPTLEG 226
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           + S+  +  +       PS R T KE+  H + L+N
Sbjct: 227 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 262

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K    VGTP ++APEV+ +
Sbjct: 122 SEKKIHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY------V 141
             YD K AD+WS G+T   +  G  P  +              M V + IP         
Sbjct: 179 SAYDSK-ADIWSLGITAIELARGEPPHSELHP-----------MKVLFLIPKNNPPTLEG 226
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           + S+  +  +       PS R T KE+  H + L+N
Sbjct: 227 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 262

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K    VGTP ++APEV+ +
Sbjct: 137 SEKKIHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY------V 141
             YD K AD+WS G+T   +  G  P  +              M V + IP         
Sbjct: 194 SAYDSK-ADIWSLGITAIELARGEPPHSELHP-----------MKVLFLIPKNNPPTLEG 241
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           + S+  +  +       PS R T KE+  H + L+N
Sbjct: 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR-EYD 91
           + +RDLK  N LLD      ++I D G +       +P ++VGT  Y+APEVL +   YD
Sbjct: 313 VVYRDLKPANILLD--EHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYD 369
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
              AD +S G  L+ +L G  PF  Q   K+  +     + +  ++PD    S + R+LL
Sbjct: 370 SS-ADWFSLGCMLFKLLRGHSPFR-QHKTKDKHEIDRMTLTMAVELPD--SFSPELRSLL 425
Query: 152 SRIFVANPSRRITI-----KEIKSHPWF 174
             +   + +RR+       +E+K  P+F
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR-EYD 91
           + +RDLK  N LLD      ++I D G +       +P ++VGT  Y+APEVL +   YD
Sbjct: 313 VVYRDLKPANILLD--EHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYD 369
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
              AD +S G  L+ +L G  PF  Q   K+  +     + +  ++PD    S + R+LL
Sbjct: 370 SS-ADWFSLGCMLFKLLRGHSPFR-QHKTKDKHEIDRMTLTMAVELPD--SFSPELRSLL 425
Query: 152 SRIFVANPSRRITI-----KEIKSHPWF 174
             +   + +RR+       +E+K  P+F
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
Query: 33  ICHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 365
Query: 89  -EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             YD   AD +S G  L+ +L G  PF  Q   K+  +     + +  ++PD    S + 
Sbjct: 366 VAYDSS-ADWFSLGCMLFKLLRGHSPFR-QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 421
Query: 148 RNLLSRIFVANPSRRITI-----KEIKSHPWF 174
           R+LL  +   + +RR+       +E+K  P+F
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
Query: 33  ICHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           + +RDLK  N LLD     R+      CDF   K       P ++VGT  Y+APEVL + 
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPEVLQKG 364
Query: 89  -EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             YD   AD +S G  L+ +L G  PF  Q   K+  +     + +  ++PD    S + 
Sbjct: 365 VAYDSS-ADWFSLGCMLFKLLRGHSPFR-QHKTKDKHEIDRMTLTMAVELPD--SFSPEL 420
Query: 148 RNLLSRIFVANPSRRITI-----KEIKSHPWF 174
           R+LL  +   + +RR+       +E+K  P+F
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 30  SQQICHRDLKLENTL--LDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVL- 85
             +I HRDLK  N L  LDG     +K+ DFG S K++    R  S +GTP ++APEV+ 
Sbjct: 153 DNKIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM 208
Query: 86  ----SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
                 R YD K ADVWS G+TL + +    P   + +P      I++        P   
Sbjct: 209 CETSKDRPYDYK-ADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS-- 264
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL--KNLP-RELTETAQA 188
             S + ++ L +    N   R T  ++  HP+     N P REL   A+A
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKA 314

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 30  SQQICHRDLKLENTL--LDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVL- 85
             +I HRDLK  N L  LDG     +K+ DFG S K++    R  S +GTP ++APEV+ 
Sbjct: 153 DNKIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 208
Query: 86  ----SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
                 R YD K ADVWS G+TL + +    P   + +P      I++        P   
Sbjct: 209 CETSKDRPYDYK-ADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS-- 264
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL--KNLP-RELTETAQA 188
             S + ++ L +    N   R T  ++  HP+     N P REL   A+A
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKA 314

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-------SRPKSTV-------GTPA 78
           I HRDLK+EN LL  S    +K+CDFG S +++ H       ++ ++ V        TP 
Sbjct: 159 IIHRDLKVENLLL--SNQGTIKLCDFG-SATTISHYPDYSWSAQRRALVEEEITRNTTPM 215
Query: 79  YIAPEVLSRREY--DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
           Y  PE++        G+  D+W+ G  LY++    +PFED            RI+  +Y 
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--------LRIVNGKYS 267
Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
           IP +        +L+  +   NP  R++I E+
Sbjct: 268 IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK EN L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 122 SHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 128 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK EN L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 124 SHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK EN L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK EN L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 122 SHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK EN L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 123 SHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 10  EFVMLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR 69
           E ++ + +V +   +++      + HRD+K  N LLD     ++K+CDFG S   +    
Sbjct: 123 ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD--ERGQIKLCDFGISGRLVDDKA 180
Query: 70  PKSTVGTPAYIAPEVL-----SRREYDGKLADVWSCGVTLYVMLVGAYPFED 116
              + G  AY+APE +     ++ +YD + ADVWS G++L  +  G +P+++
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIR-ADVWSLGISLVELATGQFPYKN 231

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 128 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 122 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 30  SQQICHRDLKLENTL--LDGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVL- 85
             +I HRDLK  N L  LDG     +K+ DFG S K++    R    +GTP ++APEV+ 
Sbjct: 153 DNKIIHRDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM 208
Query: 86  ----SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
                 R YD K ADVWS G+TL + +    P   + +P      I++        P   
Sbjct: 209 CETSKDRPYDYK-ADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS-- 264
Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL--KNLP-RELTETAQA 188
             S + ++ L +    N   R T  ++  HP+     N P REL   A+A
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKA 314

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 125 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 122 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 123 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 125 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 182
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 123 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 123 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++   A  +K+ DFG +++  +  R     V T  Y APE+L   
Sbjct: 122 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFR--KTISRIMAVQY----KIPDYV 141
           +Y     D+WS G     M+     F  D E  + FR  +T+     V +     +PDY 
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 142 H----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +D R+LLS++   +P++RI+ K   +HP+F
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++  +      V T  Y APEV+    
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG 199
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI------------------- 130
           Y   + D+WS G  +  ++ G+  F+  +    + K I ++                   
Sbjct: 200 YKENV-DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 258
Query: 131 --------MAVQYKIPDYVHISQ---------DCRNLLSRIFVANPSRRITIKEIKSHPW 173
                   +A +   PD++  S+           R+LLS++ V +P +RI++ E   HP+
Sbjct: 259 ENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 20/153 (13%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           +Q+I HRD+K +N LLD      + I DF  +      ++  +  GT  Y+APE+ S R+
Sbjct: 133 NQRIIHRDMKPDNILLD--EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 90  YDGK--LADVWSCGVTLYVMLVGAYPFE------DQEDPKNFRKTISRIMAVQYKIPDYV 141
             G     D WS GVT Y +L G  P+        +E    F  T+     V Y      
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-----VTYPSA--- 242
Query: 142 HISQDCRNLLSRIFVANPSRRIT-IKEIKSHPW 173
             SQ+  +LL ++   NP +R + + ++++ P+
Sbjct: 243 -WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           + + HRDLK  N LL       LKICDFG +     H    +  G+ A++APEV     Y
Sbjct: 125 KALIHRDLKPPNLLLVAG-GTVLKICDFGTACDIQTHM--TNNKGSAAWMAPEVFEGSNY 181
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
             K  DV+S G+ L+ ++    PF++   P  FR  I   +    + P   ++ +   +L
Sbjct: 182 SEK-CDVFSWGIILWEVITRRKPFDEIGGPA-FR--IMWAVHNGTRPPLIKNLPKPIESL 237
Query: 151 LSRIFVANPSRRITIKEI 168
           ++R +  +PS+R +++EI
Sbjct: 238 MTRCWSKDPSQRPSMEEI 255

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           + + HRDLK  N LL       LKICDFG +     H    +  G+ A++APEV     Y
Sbjct: 124 KALIHRDLKPPNLLLVAG-GTVLKICDFGTACDIQTHM--TNNKGSAAWMAPEVFEGSNY 180
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL 150
             K  DV+S G+ L+ ++    PF++   P  FR  I   +    + P   ++ +   +L
Sbjct: 181 SEK-CDVFSWGIILWEVITRRKPFDEIGGPA-FR--IMWAVHNGTRPPLIKNLPKPIESL 236
Query: 151 LSRIFVANPSRRITIKEI 168
           ++R +  +PS+R +++EI
Sbjct: 237 MTRCWSKDPSQRPSMEEI 254

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 39/192 (20%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP----KSTVGTPAYIAPEVLSRREY 90
           HRD+K EN L+       +K+CDFG+++   L + P       V T  Y +PE+L     
Sbjct: 125 HRDVKPENILITKHSV--IKLCDFGFAR---LLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF---RKTISRIM--------AVQY---- 135
            G   DVW+ G     +L G   +  + D       RKT+  ++          QY    
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 136 KIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF-----LKNLPR 180
           KIPD          + +IS     LL      +P+ R+T +++  HP+F     +++L +
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAK 299
Query: 181 ELTETAQAIYYR 192
           E  + A+ +Y++
Sbjct: 300 EHDKPAENLYFQ 311

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++  +      V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI--------MAVQYKI---- 137
           Y   + D+WS G  +  ++ G   F+  +    + K I ++         A+Q  +    
Sbjct: 202 YAANV-DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 260
Query: 138 ---------------PDYVHISQ---------DCRNLLSRIFVANPSRRITIKEIKSHPW 173
                          PD++  S+           R+LLS++ V +P +RI++ E   HP+
Sbjct: 261 ENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 320

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 35/175 (20%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVL-SRR 88
            +I HRDLK +N L++     +LK+ DFG +++  +  +   S V T  Y AP+VL   R
Sbjct: 127 NKILHRDLKPQNLLIN--KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------YKIPDY 140
            Y   + D+WSCG  L  M+ G   F    D +   K I  IM            K+P Y
Sbjct: 185 TYSTSI-DIWSCGCILAEMITGKPLFPGTNDEEQL-KLIFDIMGTPNESLWPSVTKLPKY 242
Query: 141 V-HISQ----DCR----------------NLLSRIFVANPSRRITIKEIKSHPWF 174
             +I Q    D R                + L  +   NP  R++ K+   HPWF
Sbjct: 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSLLHSRPKSTVGTPAYIAPEV 84
           S+++ HRD+K  N  +  +    +K+ D G      SK++  HS     VGTP Y++PE 
Sbjct: 154 SRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPER 207
Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
           +    Y+ K +D+WS G  LY M     PF    D  N      +I    Y      H S
Sbjct: 208 IHENGYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 145 QDCRNLLSRIFVANPSRR 162
           ++ R L++     +P +R
Sbjct: 265 EELRQLVNMCINPDPEKR 282

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S++  HRD+K  N LL  S    +K+ DFG +   L  ++ K    VGTP ++APEV+ +
Sbjct: 134 SERKIHRDIKAANVLL--SEQGDVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFED 116
             YD K AD+WS G+T   +  G  P  D
Sbjct: 191 SAYDFK-ADIWSLGITAIELAKGEPPNSD 218

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 29/151 (19%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRREYDGK 93
           HRD+K  N LL+       K+ DFG +   +   ++    +GTP ++APEV+    Y+  
Sbjct: 148 HRDIKAGNILLNTEG--HAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC- 204
Query: 94  LADVWSCGVTLYVMLVGAYPFED-----------QEDPKNFRKTISRIMAVQYKIPDYVH 142
           +AD+WS G+T   M  G  P+ D              P  FRK            P+   
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRK------------PEL-- 250
Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
            S +  + + +  V +P +R T  ++  HP+
Sbjct: 251 WSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HR+LK  N L+D      +K+CDFG S+   S+ L S  KS  GTP ++APEVL R E
Sbjct: 160 IVHRNLKSPNLLVDKKYT--VKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVL-RDE 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFED 116
              + +DV+S GV L+ +     P+ +
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGN 241

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 27/170 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S+ + HRDLK +N L++ +    LK+ DFG +++  +  R  S  V T  Y  P+VL   
Sbjct: 119 SRNVLHRDLKPQNLLINRNG--ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------QYKIPDY 140
           +      D+WS G     +   A P     D  +  K I R++            K+PDY
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 141 V----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                             ++   R+LL  +   NP +RI+ +E   HP+F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 177 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 234
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 235 TSSI-DVWSAGCVLAELLLG 253

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 155 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 213 TSSI-DVWSAGCVLAELLLG 231

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 30  SQQICHRDLKLENTL--LDGSPAPRLKICDFGYSKSSL--LHSRPKSTVGTPAYIAPEV- 84
           S++I HRDLK  N L  L+G     +++ DFG S  +L  L  R  S +GTP ++APEV 
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVV 181
Query: 85  ----LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY 140
               +    YD K AD+WS G+TL + +    P   + +P      I++        P  
Sbjct: 182 MCETMKDTPYDYK-ADIWSLGITL-IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPS- 238
Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP-----RELTETAQA 188
              S + R+ L      NP  R +  ++  HP F+ ++      REL   A+A
Sbjct: 239 -KWSVEFRDFLKIALDKNPETRPSAAQLLEHP-FVSSITSNKALRELVAEAKA 289

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 151 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 208
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 209 TSSI-DVWSAGCVLAELLLG 227

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 155 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 213 TSSI-DVWSAGCVLAELLLG 231

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 30  SQQICHRDLKLENTL--LDGSPAPRLKICDFGYSKSSL--LHSRPKSTVGTPAYIAPEV- 84
           S++I HRDLK  N L  L+G     +++ DFG S  +L  L  R  S +GTP ++APEV 
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVV 189
Query: 85  ----LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY 140
               +    YD K AD+WS G+TL + +    P   + +P      I++        P  
Sbjct: 190 MCETMKDTPYDYK-ADIWSLGITL-IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPS- 246
Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP-----RELTETAQA 188
              S + R+ L      NP  R +  ++  HP F+ ++      REL   A+A
Sbjct: 247 -KWSVEFRDFLKIALDKNPETRPSAAQLLEHP-FVSSITSNKALRELVAEAKA 297

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 162 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 219
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 220 TSSI-DVWSAGCVLAELLLG 238

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDLK  N L+D      +K+CDFG S+   S  L S  K   GTP ++APEVL R E
Sbjct: 160 IVHRDLKSPNLLVDKKYT--VKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVL-RDE 214
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPF 114
              + +DV+S GV L+ +     P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPW 239

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 144 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 201
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 202 TSSI-DVWSAGCVLAELLLG 220

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 171 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 228
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 229 TSSI-DVWSAGCVLAELLLG 247

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 147 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSXICSRYYRAPELIFGATDY 204
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 205 TSSI-DVWSAGCVLAELLLG 223

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 25  FFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV 84
           F  + +  I HRDLK +N  + G P   +KI D G + +    S  K+ +GTP + APE 
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITG-PTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEX 201
Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPF-EDQEDPKNFRKTISRIMAVQYK---IPDY 140
              + YD  + DV++ G          YP+ E Q   + +R+  S +    +    IP+ 
Sbjct: 202 YEEK-YDESV-DVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259
Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             I + C          N   R +IK++ +H +F
Sbjct: 260 KEIIEGC-------IRQNKDERYSIKDLLNHAFF 286

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 177 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 234
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 235 TSSI-DVWSAGCVLAELLLG 253

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 179 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 236
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 237 TSSI-DVWSAGCVLAELLLG 255

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 222 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 279
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 280 TSSI-DVWSAGCVLAELLLG 298

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 148 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 205
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 206 TSSI-DVWSAGCVLAELLLG 224

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 181 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 238
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 239 TSSI-DVWSAGCVLAELLLG 257

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 156 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 213
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 214 TSSI-DVWSAGCVLAELLLG 232

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE-VLSRREY 90
           ICHRD+K +N LLD   A  LK+CDFG +K  L+   P  S + +  Y APE +    +Y
Sbjct: 143 ICHRDIKPQNLLLDPDTA-VLKLCDFGSAK-QLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 91  DGKLADVWSCGVTLYVMLVG 110
              + DVWS G  L  +L+G
Sbjct: 201 TSSI-DVWSAGCVLAELLLG 219

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           ICHRD+K +N LLD  P+  LK+ DFG +K  +      S + +  Y APE++       
Sbjct: 162 ICHRDIKPQNLLLD-PPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYT 220
Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA-----VQYKIPDYVH----- 142
              D+WS G  +  ++ G   F  +       + I  +       ++   P+Y+      
Sbjct: 221 TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQ 280
Query: 143 -------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                           D  +L+SR+    PS R+T  E   HP+F
Sbjct: 281 IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRRE 89
            +I HRDLK +N L++   A  LK+ DFG +++  +  R  +  V T  Y AP+VL   +
Sbjct: 138 HRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS--------------------- 128
                 D+WS G     M+ G   F    D     K  S                     
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 129 RIMAVQYKIPDYVHISQDCR---NLLSRIFVANPSRRITIKEIKSHPWF 174
           R   V  K P    I   C+   +LLS +   +P++RI+ ++  +HP+F
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 46/217 (21%)
Query: 1   MQLGVSSLSEFVMLEGSVKMKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRL 53
           M+L  ++LS+ + +E   +    + +  L       S  I HRDLK  N ++       L
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT--L 165
Query: 54  KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP 113
           KI DFG ++++         V T  Y APEV+    Y   + D+WS GV +  M+ G   
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGVIMGEMIKGGVL 224
Query: 114 FEDQEDPKNFRKTISRIMA--------VQYKIPDYVH----------------------- 142
           F   +    + K I ++          +Q  +  YV                        
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 143 -----ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                 +   R+LLS++ V + S+RI++ E   HP+ 
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 33  ICHRDLKLENTLL-----DGSPAPR-LKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVL 85
           I HRDLK  N L+     +G  + + LKI DFG ++    H   K S  G  A++APEV+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE--WHRTTKMSAAGAYAWMAPEVI 186
Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPF 114
            R     K +DVWS GV L+ +L G  PF
Sbjct: 187 -RASMFSKGSDVWSYGVLLWELLTGEVPF 214

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRRE 89
            +I HRDLK +N L++   A  LK+ DFG +++  +  R  +  V T  Y AP+VL   +
Sbjct: 138 HRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIS--------------------- 128
                 D+WS G     M+ G   F    D     K  S                     
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 129 RIMAVQYKIPDYVHISQDCR---NLLSRIFVANPSRRITIKEIKSHPWF 174
           R   V  K P    I   C+   +LLS +   +P++RI+ ++  +HP+F
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 35/176 (19%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N L++ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 162 SANVLHRDLKPSNLLINTTCD--LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 86  SRREYDGKLADVWSCGVTLYVML------------------VGAYPFEDQED-------- 119
              +   K  D+WS G  L  ML                  +G      QED        
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMK 279
Query: 120 PKNFRKTI-SRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            +N+ +++ S+      K+  +        +LL R+   NP++RIT++E  +HP+ 
Sbjct: 280 ARNYLQSLPSKTKVAWAKL--FPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 46/217 (21%)
Query: 1   MQLGVSSLSEFVMLEGSVKMKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRL 53
           M+L  ++LS+ + +E   +    + +  L       S  I HRDLK  N ++       L
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT--L 165
Query: 54  KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP 113
           KI DFG ++++         V T  Y APEV+    Y   + D+WS GV +  M+ G   
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGVIMGEMIKGGVL 224
Query: 114 FEDQEDPKNFRKTISRIMA--------VQYKIPDYVH----------------------- 142
           F   +    + K I ++          +Q  +  YV                        
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 143 -----ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                 +   R+LLS++ V + S+RI++ E   HP+ 
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 41/165 (24%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VGT  Y+ PE 
Sbjct: 132 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 183
Query: 85  L----SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +    S RE +GK         DVWS G  LY M  G  PF+           IS++ A+
Sbjct: 184 IKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAI 236
Query: 134 -----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 237 IDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 279

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 41/165 (24%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VGT  Y+ PE 
Sbjct: 148 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 199
Query: 85  L----SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +    S RE +GK         DVWS G  LY M  G  PF+           IS++ A+
Sbjct: 200 IKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAI 252
Query: 134 -----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 253 IDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 41/165 (24%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VGT  Y+ PE 
Sbjct: 176 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 85  L----SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +    S RE +GK         DVWS G  LY M  G  PF+           IS++ A+
Sbjct: 228 IKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAI 280
Query: 134 -----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 281 IDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 39/164 (23%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VGT  Y+ PE 
Sbjct: 176 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 85  L----SRRE------YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV- 133
           +    S RE           +DVWS G  LY M  G  PF+           IS++ A+ 
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAII 281
Query: 134 ----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
               + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 282 DPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 32  QICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           +I HRDLK EN +L   P   + KI D GY+K           VGT  Y+APE+L +++Y
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY 201
Query: 91  DGKLADVWSCGVTLYVMLVGAYPF 114
              + D WS G   +  + G  PF
Sbjct: 202 TVTV-DYWSFGTLAFECITGFRPF 224

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 32  QICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
           +I HRDLK EN +L   P   + KI D GY+K           VGT  Y+APE+L +++Y
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY 200
Query: 91  DGKLADVWSCGVTLYVMLVGAYPF 114
              + D WS G   +  + G  PF
Sbjct: 201 TVTV-DYWSFGTLAFECITGFRPF 223

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 41/165 (24%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VGT  Y+ PE 
Sbjct: 129 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 85  L----SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +    S RE +GK         DVWS G  LY M  G  PF+           IS++ A+
Sbjct: 181 IKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAI 233
Query: 134 -----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 234 IDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 276

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 39/180 (21%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKS-------TVGTPAYI 80
            + HRDLK  N L++ +    LK+CDFG ++    S+  +S P          V T  Y 
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 81  APEVLSRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQE-------------DPKNFRK 125
           APEV+       +  DVWSCG  L  + +    +P  D                  N  +
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 126 TISRIMAVQY--KIPDY---------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            I    A +Y   +P Y           ++    +LL R+ V +P++RIT KE   HP+ 
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 41/165 (24%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VGT  Y+ PE 
Sbjct: 128 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPPEA 179
Query: 85  L----SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +    S RE +GK         DVWS G  LY M  G  PF+           IS++ A+
Sbjct: 180 IKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAI 232
Query: 134 -----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 233 IDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 275

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPE----VLSR 87
           + HRD+K  N L++     ++K+CDFG S   L+ S  K+   G   Y+APE     L++
Sbjct: 175 VIHRDVKPSNVLINA--LGQVKMCDFGIS-GYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           + Y  K +D+WS G+T+  + +  +P++    P    K +    + Q     +   S + 
Sbjct: 232 KGYSVK-SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEF 287
Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +  S+    N   R T  E+  HP+F
Sbjct: 288 VDFTSQCLKKNSKERPTYPELMQHPFF 314

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 33/161 (20%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAYIAPEVL--- 85
           I H DLK  N L+ DG     LK+ DFG +             S VGT  Y+ PE +   
Sbjct: 148 IVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 86  -SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---- 133
            S RE +GK         DVWS G  LY M  G  PF+           IS++ A+    
Sbjct: 204 SSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAIIDPN 256
Query: 134 -QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
            + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 257 HEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 39/180 (21%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKST-------VGTPAYI 80
            + HRDLK  N L++ +    LK+CDFG ++    S+  +S P          V T  Y 
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 81  APEVLSRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQE-------------DPKNFRK 125
           APEV+       +  DVWSCG  L  + +    +P  D                  N  +
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 126 TISRIMAVQY--KIPDY---------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            I    A +Y   +P Y           ++    +LL R+ V +P++RIT KE   HP+ 
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 39/180 (21%)
Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKST-------VGTPAYI 80
            + HRDLK  N L++ +    LK+CDFG ++    S+  +S P          V T  Y 
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 81  APEVLSRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQE-------------DPKNFRK 125
           APEV+       +  DVWSCG  L  + +    +P  D                  N  +
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 126 TISRIMAVQY--KIPDY---------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            I    A +Y   +P Y           ++    +LL R+ V +P++RIT KE   HP+ 
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPEVLSRR 88
           HRD+K +N LLD      +++ DFG    S L  R   TV      GTP Y++PE+L   
Sbjct: 185 HRDIKPDNILLD--RCGHIRLADFG----SCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 89  EYDGKL------ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH 142
                        D W+ GV  Y M  G  PF      + + K +     +   + D   
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE-G 297
Query: 143 ISQDCRNLLSRIFVANPSR--RITIKEIKSHPWFL 175
           + ++ R+ + R+     +R  R    + ++HP+F 
Sbjct: 298 VPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFF 332

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV---LS 86
           S  + HRD+K  N LL  S    +K+ DFG   S+ + +     VGTP ++APEV   + 
Sbjct: 172 SHNMIHRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMD 226
Query: 87  RREYDGKLADVWSCGVT 103
             +YDGK+ DVWS G+T
Sbjct: 227 EGQYDGKV-DVWSLGIT 242

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV---LS 86
           S  + HRD+K  N LL  S    +K+ DFG   S+ + +     VGTP ++APEV   + 
Sbjct: 133 SHNMIHRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMD 187
Query: 87  RREYDGKLADVWSCGVT 103
             +YDGK+ DVWS G+T
Sbjct: 188 EGQYDGKV-DVWSLGIT 203

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 32/176 (18%)
Query: 25  FFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPE 83
           F  SL   ICHRD+K +N L++ S    LK+CDFG +K  L+ S P  + + +  Y APE
Sbjct: 156 FIHSLG--ICHRDIKPQNLLVN-SKDNTLKLCDFGSAK-KLIPSEPSVAXICSRFYRAPE 211
Query: 84  V-LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK------ 136
           + L   EY   + D+WS G     +++G   F  +       + I +IM    K      
Sbjct: 212 LMLGATEYTPSI-DLWSIGCVFGELILGKPLFSGETSIDQLVRII-QIMGTPTKEQMIRM 269
Query: 137 IPDYVHI------SQDCR------------NLLSRIFVANPSRRITIKEIKSHPWF 174
            P Y  +      ++D R            +LL +I    P  RI   E  +HP+F
Sbjct: 270 NPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S+ + HRDLK +N L++ +    LK+ +FG +++  +  R  S  V T  Y  P+VL   
Sbjct: 119 SRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------QYKIPDY 140
           +      D+WS G     +     P     D  +  K I R++            K+PDY
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 141 V----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                             ++   R+LL  +   NP +RI+ +E   HP+F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPE----VLSRR 88
           + HRD+K  N L++     ++K+CDFG S   +         G   Y+APE     L+++
Sbjct: 131 VIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K +D+WS G+T+  + +  +P++    P    K +    + Q     +   S +  
Sbjct: 189 GYSVK-SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFV 244
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
           +  S+    N   R T  E+  HP+F
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQHPFF 270

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 24/166 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  
Sbjct: 138 SHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI----------------MAV 133
           Y     D+WS G     M      F    D     K +  I                 A 
Sbjct: 196 Y-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254
Query: 134 QYK----IPDYV-HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             K    I  +V  I +  ++LL +    NP++RI+     SHP+F
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRREYD 91
           I HRDLK  N LLD +    LK+ DFG +KS    +R     V T  Y APE+L      
Sbjct: 133 ILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 92  GKLADVWSCGVTLYVMLVGAYPF----EDQEDPKNFRKTISRIMAVQY----KIPDYV-- 141
           G   D+W+ G  L  +L+   PF     D +      +T+      Q+     +PDYV  
Sbjct: 191 GVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 249
Query: 142 ---------HI----SQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                    HI      D  +L+  +F+ NP  RIT  +     +F
Sbjct: 250 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 24/166 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  
Sbjct: 138 SHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI----------------MAV 133
           Y     D+WS G     M      F    D     K +  I                 A 
Sbjct: 196 Y-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254
Query: 134 QYK----IPDYV-HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             K    I  +V  I +  ++LL +    NP++RI+     SHP+F
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 24/166 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  
Sbjct: 138 SHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI----------------MAV 133
           Y     D+WS G     M      F    D     K +  I                 A 
Sbjct: 196 Y-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254
Query: 134 QYK----IPDYV-HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             K    I  +V  I +  ++LL +    NP++RI+     SHP+F
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 41/165 (24%)
Query: 33  ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-------VGTPAYIAPEV 84
           I H DLK  N L+ DG     LK+ DFG +       +P +T       VG   Y+ PE 
Sbjct: 176 IVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 85  L----SRREYDGKLA-------DVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +    S RE +GK         DVWS G  LY M  G  PF+           IS++ A+
Sbjct: 228 IKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ------QIINQISKLHAI 280
Query: 134 -----QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                + + PD     +D +++L      +P +RI+I E+ +HP+
Sbjct: 281 IDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 35/166 (21%)
Query: 30  SQQICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLL----HSRPKSTVGTPAYIAP 82
           S  I HRDLK  N L+   +     +  I DFG  K   +     SR     GT  +IAP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 83  EVLSR--REYDGKLADVWSCG-VTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD 139
           E+LS   +E      D++S G V  YV+  G++PF      K+ ++  + ++        
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-----GKSLQRQANILLGA------ 244
Query: 140 YVHISQDC-----------RNLLSRIFVANPSRRITIKEIKSHPWF 174
               S DC           R L+ ++   +P +R + K +  HP+F
Sbjct: 245 ---CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 46/217 (21%)
Query: 1   MQLGVSSLSEFVMLEGSVKMKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRL 53
           M+L  ++LS+ + +E   +    + +  L       S  I HRDLK  N ++       L
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT--L 165
Query: 54  KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP 113
           KI DFG ++++         V T  Y APEV+    Y   + D+WS G  +  M+ G   
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVL 224
Query: 114 FEDQEDPKNFRKTISRIMA--------VQYKIPDYVH----------------------- 142
           F   +    + K I ++          +Q  +  YV                        
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 143 -----ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                 +   R+LLS++ V + S+RI++ E   HP+ 
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIA 81
           S++I H D+K +N LL  DGS A    +CDFG++         KS +      GT  ++A
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHA---ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMA 259
Query: 82  PEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
           PEV+  R  D K+ DVWS    +  ML G +P+
Sbjct: 260 PEVVLGRSCDAKV-DVWSSCCMMLHMLNGCHPW 291

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 46/217 (21%)
Query: 1   MQLGVSSLSEFVMLEGSVKMKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRL 53
           M+L  ++LS+ + +E   +    + +  L       S  I HRDLK  N ++       L
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT--L 165
Query: 54  KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP 113
           KI DFG ++++         V T  Y APEV+    Y   + D+WS G  +  M+ G   
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVL 224
Query: 114 FEDQEDPKNFRKTISRIMA--------VQYKIPDYVH----------------------- 142
           F   +    + K I ++          +Q  +  YV                        
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 143 -----ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                 +   R+LLS++ V + S+RI++ E   HP+ 
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 46/217 (21%)
Query: 1   MQLGVSSLSEFVMLEGSVKMKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRL 53
           M+L  ++LS+ + +E   +    + +  L       S  I HRDLK  N ++       L
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT--L 165
Query: 54  KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP 113
           KI DFG ++++         V T  Y APEV+    Y   + D+WS G  +  M+ G   
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVL 224
Query: 114 FEDQEDPKNFRKTISRIMA--------VQYKIPDYVH----------------------- 142
           F   +    + K I ++          +Q  +  YV                        
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 143 -----ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                 +   R+LLS++ V + S+RI++ E   HP+ 
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L+  S +  +K+CDFG++++           V T  Y APE+L   
Sbjct: 142 SHNIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 89  EYDGKLADVWSCGVTLYVMLVG 110
              GK  DVW+ G  +  M +G
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMG 221

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEVLSRR 88
           S  +CHRD+K  N L++ +    LK+CDFG +K  L  S P  + + +  Y APE++   
Sbjct: 149 SVNVCHRDIKPHNVLVNEADG-TLKLCDFGSAKK-LSPSEPNVAYICSRYYRAPELIFGN 206
Query: 89  EYDGKLADVWSCGVTLYVMLVG 110
           ++     D+WS G     M++G
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLG 228

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSS------LLHSRPKSTVGTPAYIAPEVLSRR 88
           HRD+K  N LLD   A   KI DFG +++S      ++ SR    VGT AY+APE L R 
Sbjct: 156 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXSR---IVGTTAYMAPEAL-RG 209
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK 121
           E   K +D++S GV L  ++ G    ++  +P+
Sbjct: 210 EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQ 241

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 46/217 (21%)
Query: 1   MQLGVSSLSEFVMLEGSVKMKPDIFFSSL-------SQQICHRDLKLENTLLDGSPAPRL 53
           M+L  ++LS+ + +E   +    + +  L       S  I HRDLK  N ++       L
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--L 165
Query: 54  KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYP 113
           KI DFG ++++         V T  Y APEV+    Y   + D+WS G  +  M+ G   
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIKGGVL 224
Query: 114 FEDQEDPKNFRKTISRIMA--------VQYKIPDYVH----------------------- 142
           F   +    + K I ++          +Q  +  YV                        
Sbjct: 225 FPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 143 -----ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                 +   R+LLS++ V + S+RI++ E   HP+ 
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIA 81
           S++I H D+K +N LL  DGS A    +CDFG++         K  +      GT  ++A
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHA---ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMA 240
Query: 82  PEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
           PEV+  R  D K+ DVWS    +  ML G +P+
Sbjct: 241 PEVVLGRSCDAKV-DVWSSCCMMLHMLNGCHPW 272

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 29/167 (17%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK  N  ++      LKI DFG ++ +   S     V T  Y APEV+       
Sbjct: 149 IIHRDLKPGNLAVNEDC--ELKILDFGLARQA--DSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 93  KLADVWSCGVTLYVMLVGAYPFE--DQED------------PKNFRKTISRIMAVQY--K 136
           +  D+WS G  +  M+ G   F+  D  D            P  F + +    A  Y   
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG 264
Query: 137 IP-----DYVHISQDCR----NLLSRIFVANPSRRITIKEIKSHPWF 174
           +P     D+  I  +      NLL ++ V +  +R+T  E  +HP+F
Sbjct: 265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPE 83
           +++I H D+K +N LL  S   R  +CDFG++         KS +      GT  ++APE
Sbjct: 184 TRRILHGDVKADNVLLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
           V+  +  D K+ D+WS    +  ML G +P+
Sbjct: 243 VVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 272

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPE 83
           +++I H D+K +N LL  S   R  +CDFG++         KS +      GT  ++APE
Sbjct: 168 TRRILHGDVKADNVLLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
           V+  +  D K+ D+WS    +  ML G +P+
Sbjct: 227 VVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 256

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV------GTPAYIAPE 83
           +++I H D+K +N LL  S   R  +CDFG++         KS +      GT  ++APE
Sbjct: 182 TRRILHGDVKADNVLLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
           V+  +  D K+ D+WS    +  ML G +P+
Sbjct: 241 VVMGKPCDAKV-DIWSSCCMMLHMLNGCHPW 270

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
            +++ HRDLK +N L++      LKI DFG +++  +  R  +  V T  Y AP+VL   
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------QYKIPDY 140
           +      D+WS G     M+ GA  F    +     + I RI+            ++P Y
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMR-IFRILGTPNSKNWPNVTELPKY 234
Query: 141 ----------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
                             + +   +LLS++   +P++RIT K+   H +F +N
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SL----LHSRP--------KSTV 74
           SQ I HRDLK  N  +D S    +KI DFG +K+   SL    L S+          S +
Sbjct: 134 SQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 75  GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ 134
           GT  Y+A EVL    +  +  D++S G+  + M+   YPF    +  N  K + R ++++
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL-RSVSIE 247
Query: 135 YKIPDYVHISQDCRNLLSRIFV-ANPSRRITIKEIKSHPWF 174
           +  PD+          + R+ +  +P++R   + + +  W 
Sbjct: 248 FP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYD 91
           HRD+K  N LLD   A   KI DFG +++S   ++       VGT AY+APE L R E  
Sbjct: 156 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEIT 212
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPK 121
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 213 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 241

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SL----LHSRP--------KSTV 74
           SQ I HRDLK  N  +D S    +KI DFG +K+   SL    L S+          S +
Sbjct: 134 SQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 75  GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ 134
           GT  Y+A EVL    +  +  D++S G+  + M+   YPF    +  N  K + R ++++
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL-RSVSIE 247
Query: 135 YKIPDYVHISQDCRNLLSRIFV-ANPSRRITIKEIKSHPWF 174
           +  PD+          + R+ +  +P++R   + + +  W 
Sbjct: 248 FP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPE----VLSRR 88
           + HRD+K  N L++     ++K CDFG S   +         G   Y APE     L+++
Sbjct: 158 VIHRDVKPSNVLINA--LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQK 215
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K +D+WS G+T   + +  +P++    P    K +    + Q     +   S +  
Sbjct: 216 GYSVK-SDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFV 271
Query: 149 NLLSRIFVANPSRRITIKEIKSHPWF 174
           +  S+    N   R T  E+  HP+F
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQHPFF 297

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+ G   F   +    + K I ++          +Q  +  YV
Sbjct: 202 YKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+ G   F   +    + K I ++          +Q  +  YV
Sbjct: 202 YKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYD 91
           HRD+K  N LLD   A   KI DFG +++S   ++       VGT AY+APE L R E  
Sbjct: 150 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEIT 206
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPK 121
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 207 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 235

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+ G   F   +    + K I ++          +Q  +  YV
Sbjct: 203 YKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 261
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 262 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321
Query: 174 F 174
Sbjct: 322 I 322

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+ G   F   +    + K I ++          +Q  +  YV
Sbjct: 202 YKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 142 SANVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 86  SRREYDGKLADVWSCGVTLYVML------------------VGAYPFEDQEDPKNFRKTI 127
              +   K  D+WS G  L  ML                  +G      QED        
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLK 259
Query: 128 SR--IMAVQY--KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           +R  ++++ +  K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 146 SANVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 39/178 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 140 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 86  SRREYDGKLADVWSCGVTLYVML------------------VGAYPFEDQEDPKNFRKTI 127
              +   K  D+WS G  L  ML                  +G     +QED       I
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQED----LNCI 253
Query: 128 SRIMAVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
             + A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+ G   F   +    + K I ++          +Q  +  YV
Sbjct: 204 YKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 262
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 263 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 322
Query: 174 F 174
Sbjct: 323 I 323

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 147 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 264
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 265 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 146 SANVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 142 SANVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 259
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 162 SANVLHRDLKPSNLLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 279
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I H DLK EN LL       +K+ DFG   S   H R  + + +  Y APEV+    Y
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARY 276
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQED 119
            G   D+WS G  L  +L G YP    ED
Sbjct: 277 -GMPIDMWSLGCILAELLTG-YPLLPGED 303

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 39/178 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 144 SANVLHRDLKPSNLLLNTTSD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV------------ 133
              +   K  D+WS G  L  ML     F      K++   ++ I+ +            
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG----KHYLDQLNHILGILGSPSQEDLNCG 257
Query: 134 --------------QYKIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
                         + K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I H DLK EN LL       +K+ DFG   S   H R  + + +  Y APEV+    Y
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARY 276
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQED 119
            G   D+WS G  L  +L G YP    ED
Sbjct: 277 -GMPIDMWSLGCILAELLTG-YPLLPGED 303

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---SRPKSTVG-------TPAYIAPEV 84
           HRDLK  N LL     P L   D G    + +H   SR   T+        T +Y APE+
Sbjct: 157 HRDLKPTNILLGDEGQPVLM--DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 85  LSRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDY 140
            S + +    +  DVWS G  LY M+ G  P++       F+K  S  +AVQ +  IP  
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD-----MVFQKGDSVALAVQNQLSIPQS 269
Query: 141 VHISQDCRNLLSRIFVANPSRR 162
              S     LL+ +   +P +R
Sbjct: 270 PRHSSALWQLLNSMMTVDPHQR 291

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 150 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 267
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 268 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 142 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 259
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 144 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 261
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 144 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 261
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 140 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 257
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 258 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 162 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 279
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 147 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 264
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 265 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 148 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 265
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 266 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 139 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 256
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 257 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS--KSSLLHSRP-KSTVGTPAYIAPEVLS 86
           ++ I HRD+K  N  L       +KI DFG +  KS    S+  +   G+  ++APEV+ 
Sbjct: 150 AKNIIHRDMKSNNIFL--HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 87  RREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
            ++ +     +DV+S G+ LY ++ G  P+       N R  I  ++   Y  PD   + 
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGELPYSH----INNRDQIIFMVGRGYASPDLSKLY 263
Query: 145 QDCRNLLSRIFVANPSRRI 163
           ++C   + R+ VA+  +++
Sbjct: 264 KNCPKAMKRL-VADCVKKV 281

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 142 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 259
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++ +   H         V T  Y APE++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 86  SRREYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNF------------RKTISRIM 131
              +   K  D+WS G  L  ML     +P +   D  N                I  + 
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 132 AVQY--------KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           A  Y        K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYD 91
           HRD+K  N LLD   A   KI DFG +++S   ++       VGT AY APE L R E  
Sbjct: 147 HRDIKSANILLD--EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEIT 203
Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPK 121
            K +D++S GV L  ++ G    ++  +P+
Sbjct: 204 PK-SDIYSFGVVLLEIITGLPAVDEHREPQ 232

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
            +++ HRDLK +N L++      LKI DFG +++  +  R  +  V T  Y AP+VL   
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------QYKIPDY 140
           +      D+WS G     M+ G   F    +     + I RI+            ++P Y
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR-IFRILGTPNSKNWPNVTELPKY 234
Query: 141 ----------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
                             + +   +LLS++   +P++RIT K+   H +F +N
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 145 SADIIHRDLKPSN--LAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 259 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 149 SADIIHRDLKPSN--LAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 263 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 148 SADIIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 262 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPE 83
           S    I HRD+K  N L+  + A  +K+ DFG ++    S     +  + +GT  Y++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNA--VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
                  D + +DV+S G  LY +L G  PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 154 SADIIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 267
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 268 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 148 SADIIHRDLKPSN--LAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 262 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 33  ICHRDLKLENTLL----DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR- 87
           I HR++K  N +     DG      K+ DFG ++      +  S  GT  Y+ P++  R 
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSV--YKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 88  -------REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA 132
                  ++Y G   D+WS GVT Y    G+ PF   E P+  ++ + +I+ 
Sbjct: 191 VLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I H DLK EN LL       +K+ DFG   S   H R    + +  Y APEV+    Y
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQSRFYRAPEVILGARY 276
Query: 91  DGKLADVWSCGVTLYVMLVGAYPFEDQED 119
            G   D+WS G  L  +L G YP    ED
Sbjct: 277 -GMPIDMWSLGCILAELLTG-YPLLPGED 303

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 45/178 (25%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 172 SADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 225
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-----AVQYKIPDYVH 142
             +     D+WS G  +  +L G   F    D  N  + I R+      +V  ++P    
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLFPGT-DHINQLQQIMRLTGTPPASVISRMP---- 280
Query: 143 ISQDCRN--------------------------LLSRIFVANPSRRITIKEIKSHPWF 174
            S + RN                          LL ++ V +  +RIT  E  +HP+F
Sbjct: 281 -SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 33  ICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDL+  N  L   D +     K+ DFG S+ S+ HS     +G   ++APE +   E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV-HSV-SGLLGNFQWMAPETIGAEE 202
Query: 90  --YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             Y  K AD +S  + LY +L G  PF++    K     + R   ++  IP      +DC
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP------EDC 255
Query: 148 ----RNLLSRIFVANPSRR 162
               RN++   +  +P +R
Sbjct: 256 PPRLRNVIELCWSGDPKKR 274

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPE 83
           S    I HRD+K  N ++  + A  +K+ DFG ++    S    ++  + +GT  Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
                  D + +DV+S G  LY +L G  PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPE 83
           S    I HRD+K  N ++  + A  +K+ DFG ++    S    ++  + +GT  Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
                  D + +DV+S G  LY +L G  PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPE 83
           S    I HRD+K  N ++  + A  +K+ DFG ++    S    ++  + +GT  Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
                  D + +DV+S G  LY +L G  PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRR 88
            +++ HRDLK +N L++      LKI DFG +++  +  R  +  + T  Y AP+VL   
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------QYKIPDY 140
           +      D+WS G     M+ G   F    +     + I RI+            ++P Y
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR-IFRILGTPNSKNWPNVTELPKY 234
Query: 141 ----------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
                             + +   +LLS++   +P++RIT K+   H +F +N
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPE 83
           S    I HRD+K  N ++  + A  +K+ DFG ++    S    ++  + +GT  Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
                  D + +DV+S G  LY +L G  PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPE 83
           S    I HRD+K  N ++  + A  +K+ DFG ++    S    ++  + +GT  Y++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPF 114
                  D + +DV+S G  LY +L G  PF
Sbjct: 207 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 236

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEV-LSRR 88
           Q++ HRDLK +N L++      LK+ DFG +++  + ++   + V T  Y  P++ L   
Sbjct: 119 QKVLHRDLKPQNLLIN--ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 89  EYDGKLADVWSCGVTLYVMLVG--AYPFEDQEDPKNFRKTISRIMAV------------- 133
           +Y  ++ D+W  G   Y M  G   +P    E+  +F   I RI+               
Sbjct: 177 DYSTQI-DMWGVGCIFYEMATGRPLFPGSTVEEQLHF---IFRILGTPTEETWPGILSNE 232
Query: 134 ---QYKIPDYV---------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL 175
               Y  P Y           +  D  +LL+++       RI+ ++   HP+FL
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 33  ICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDL+  N  L   D +     K+ DFG S+ S+ HS     +G   ++APE +   E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV-HSV-SGLLGNFQWMAPETIGAEE 202
Query: 90  --YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             Y  K AD +S  + LY +L G  PF++    K     + R   ++  IP      +DC
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP------EDC 255
Query: 148 ----RNLLSRIFVANPSRR 162
               RN++   +  +P +R
Sbjct: 256 PPRLRNVIELCWSGDPKKR 274

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 150 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLN 203
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 155 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 269 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 149 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 263 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 155 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 269 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 155 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 269 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 166 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 219
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 280 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++      +  V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 145 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 259 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 150 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLN 203
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 150 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLN 203
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 148 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 262 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRDL   N LL  +    + ICDF  ++     +     V    Y APE++ + +   
Sbjct: 155 VVHRDLHPGNILL--ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT 212
Query: 93  KLADVWSCGVTLYVM-----LVGAYPFEDQ-------------EDPKNF---------RK 125
           KL D+WS G  +  M     L     F +Q             ED   F         R 
Sbjct: 213 KLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRN 272
Query: 126 TISRIMAVQYK--IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL-PREL 182
           ++S + A  +   +P    ++ D   L++++   NP RRI+ ++   HP+F     P +L
Sbjct: 273 SLSNVPARAWTAVVPTADPVALD---LIAKMLEFNPQRRISTEQALRHPYFESLFDPLDL 329
Query: 183 TETAQAIYYRKENPT 197
           TE     ++  E+ T
Sbjct: 330 TEGLSERFHFDESVT 344

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 154 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 267
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 268 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 142 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 195
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 255
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 256 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 150 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 203
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 145 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 259 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           + HRDL   N LL  +    + ICDF  ++     +     V    Y APE++ + +   
Sbjct: 155 VVHRDLHPGNILL--ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFT 212
Query: 93  KLADVWSCGVTLYVM-----LVGAYPFEDQ-------------EDPKNF---------RK 125
           KL D+WS G  +  M     L     F +Q             ED   F         R 
Sbjct: 213 KLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRN 272
Query: 126 TISRIMAVQYK--IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL-PREL 182
           ++S + A  +   +P    ++ D   L++++   NP RRI+ ++   HP+F     P +L
Sbjct: 273 SLSNVPARAWTAVVPTADPVALD---LIAKMLEFNPQRRISTEQALRHPYFESLFDPLDL 329
Query: 183 TETAQAIYYRKENPT 197
           TE     ++  E+ T
Sbjct: 330 TEGLSERFHFDESVT 344

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      LKI DFG ++ +         V T  Y APE++    
Sbjct: 163 SADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMXGXVATRWYRAPEIMLNWM 218
Query: 90  YDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPKNF 123
           +  +  D+WS G  +  +L G   +P  D                         E  +N+
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 278
Query: 124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 279 IQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 145 SADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 259 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 162 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 276 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 153 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 206
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 266
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 267 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 163 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 277 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG  +    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 195 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 148 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 262 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 163 SADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 277 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 162 SADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 276 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 140 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 253
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 254 NYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  L  +    LKI DFG ++ +         V T  Y APE++    
Sbjct: 166 SADIIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMXGYVATRWYRAPEIMLNWM 221
Query: 90  YDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPKNF 123
           +  +  D+WS G  +  +L G   +P  D                         E  +N+
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 281
Query: 124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 282 IQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 140 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 253
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 254 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 141 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 194
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 254
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 255 NYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 149 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 263 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTP---AYIAPEVLS 86
           S Q  HRDL   N L+D      +K+ DFG ++  +L  +  S+VGT     + APEV  
Sbjct: 122 SHQFIHRDLAARNCLVDRDLC--VKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFH 178
Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFE 115
             +Y  K +DVW+ G+ ++ V  +G  P++
Sbjct: 179 YFKYSSK-SDVWAFGILMWEVFSLGKMPYD 207

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 139 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 253 NYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 149 SADIIHRDLKPSN--LAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 263 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 29/173 (16%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVG----TPAYIAPEVL 85
           S  + HRDLK  N  ++ +    LKI DFG ++    H   K  +     T  Y +P +L
Sbjct: 138 SANVLHRDLKPANLFIN-TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196
Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--------I 137
                  K  D+W+ G     ML G   F    + +  +  +  I  V  +        I
Sbjct: 197 LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVI 256
Query: 138 PDYVH----------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           P Y+                 IS++  + L +I   +P  R+T +E  SHP+ 
Sbjct: 257 PVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  L  +    LKI DFG ++ +         V T  Y APE++    
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWM 198
Query: 90  YDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPKNF 123
           +  +  D+WS G  +  +L G   +P  D                         E  +N+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 258
Query: 124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 259 IQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 139 SADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 253 NYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      LKI DFG ++ +         V T  Y APE++    
Sbjct: 143 SADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWM 198
Query: 90  YDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPKNF 123
           +  +  D+WS G  +  +L G   +P  D                         E  +N+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 258
Query: 124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 259 IQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APE++  
Sbjct: 139 SADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 253 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVL-SRR 88
           S+ I HRD+K  N ++D     +L++ D+G ++           V +  +  PE+L   +
Sbjct: 150 SKGIMHRDVKPHNVMID-HQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------YKIP-- 138
            YD  L D+WS G  L  M+    PF   +D  +    I++++  +        Y I   
Sbjct: 209 MYDYSL-DMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD 267
Query: 139 ----------------DYVH------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                           +++H      +S +  +LL ++   +  +R+T KE   HP+F
Sbjct: 268 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 178
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 234
Query: 144 SQDCRNLLSRIF 155
             +C   + R+ 
Sbjct: 235 RSNCPKAMKRLM 246

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 183
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 239
Query: 144 SQDCRNLLSRIF 155
             +C   + R+ 
Sbjct: 240 RSNCPKAMKRLM 251

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 124 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 180
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 236
Query: 144 SQDCRNLLSRIF 155
             +C   + R+ 
Sbjct: 237 RSNCPKAMKRLM 248

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 195 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 183
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 239
Query: 144 SQDCRNLLSRIF 155
             +C   + R+ 
Sbjct: 240 RSNCPKAMKRLM 251

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVI 178
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 234
Query: 144 SQDCRNLLSRIF 155
             +C   + R+ 
Sbjct: 235 RSNCPKAMKRLM 246

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 203 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 261
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 262 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
Query: 174 F 174
Sbjct: 322 I 322

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 203 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 261
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 262 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
Query: 174 F 174
Sbjct: 322 I 322

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVI 206
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 262
Query: 144 SQDCRNLLSRIFV 156
             +C   + R+  
Sbjct: 263 RSNCPKAMKRLMA 275

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 201 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 259
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 260 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 319
Query: 174 F 174
Sbjct: 320 I 320

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 142 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVI 198
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 254
Query: 144 SQDCRNLLSRIFV 156
             +C   + R+  
Sbjct: 255 RSNCPKAMKRLMA 267

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVL-SRR 88
           S+ I HRD+K  N ++D     +L++ D+G ++           V +  +  PE+L   +
Sbjct: 155 SKGIMHRDVKPHNVMID-HQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------YKIP-- 138
            YD  L D+WS G  L  M+    PF   +D  +    I++++  +        Y I   
Sbjct: 214 MYDYSL-DMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD 272
Query: 139 ----------------DYVH------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                           +++H      +S +  +LL ++   +  +R+T KE   HP+F
Sbjct: 273 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 178
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 234
Query: 144 SQDCRNLLSRIF 155
             +C   + R+ 
Sbjct: 235 RSNCPKAMKRLM 246

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 240 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 298
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 196 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 254
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 255 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 202 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 261 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 196 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 254
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 255 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 149 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 205
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 261
Query: 144 SQDCRNLLSRIFV 156
             +C   + R+  
Sbjct: 262 RSNCPKAMKRLMA 274

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 206
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++   Y  PD   +
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMVGRGYLSPDLSKV 262
Query: 144 SQDCRNLLSRIFV 156
             +C   + R+  
Sbjct: 263 RSNCPKAMKRLMA 275

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      LKI DFG ++ +         V T  Y APE++    
Sbjct: 139 SADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWM 194
Query: 90  YDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPKNF 123
           +  +  D+WS G  +  +L G   +P  D                         E  +N+
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254
Query: 124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 255 IQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 240 YKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 298
Query: 142 HI----------------------------SQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358
Query: 174 F 174
Sbjct: 359 I 359

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  + HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APEV+  
Sbjct: 144 SAGVVHRDLKPGNLAVNEDC--ELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILS 197
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------- 133
             +  +  D+WS G  +  ML G   F+     K++   +++I+ V              
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVTGVPGTEFVQKLND 253
Query: 134 -----------QYKIPDYVHI----SQDCRNLLSRIFVANPSRRITIKEIKSHPWF--LK 176
                      Q    D+  +    S    +LL ++   +  +R+T  +  +HP+F   +
Sbjct: 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313
Query: 177 NLPRELTETAQ 187
           + P E TE  Q
Sbjct: 314 D-PEEETEAQQ 323

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  + HRDLK  N  ++      LKI DFG ++    H+  + T  V T  Y APEV+  
Sbjct: 162 SAGVVHRDLKPGNLAVNEDC--ELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILS 215
Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------- 133
             +  +  D+WS G  +  ML G   F+     K++   +++I+ V              
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVTGVPGTEFVQKLND 271
Query: 134 -----------QYKIPDYVHI----SQDCRNLLSRIFVANPSRRITIKEIKSHPWF--LK 176
                      Q    D+  +    S    +LL ++   +  +R+T  +  +HP+F   +
Sbjct: 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331
Query: 177 NLPRELTETAQ 187
           + P E TE  Q
Sbjct: 332 D-PEEETEAQQ 341

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI D+G ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 33  ICHRDLKLENTLL----DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR- 87
           I HR++K  N +     DG      K+ DFG ++      +     GT  Y+ P++  R 
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSV--YKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA 190
Query: 88  -------REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM 131
                  ++Y G   D+WS GVT Y    G+ PF   E P+  ++ + +I+
Sbjct: 191 VLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++      +  V T  Y APEV+    
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  +  YV
Sbjct: 202 YKENV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 174 F 174
Sbjct: 321 I 321

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRDLK  N  L      ++KI DFG   S     +   + GT  Y++PE +S ++
Sbjct: 154 SKKLIHRDLKPSNIFL--VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD 211
Query: 90  YDGKLADVWSCGVTLYVML 108
           Y GK  D+++ G+ L  +L
Sbjct: 212 Y-GKEVDLYALGLILAELL 229

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 24  IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPE 83
           +F ++    I H DLK EN LL       +KI DFG   S  L  R    + +  Y +PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPE 228
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI 127
           VL    YD  + D+WS G  L  M  G   F    +     K +
Sbjct: 229 VLLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 24  IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPE 83
           +F ++    I H DLK EN LL       +KI DFG   S  L  R    + +  Y +PE
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPE 209
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI 127
           VL    YD  + D+WS G  L  M  G   F    +     K +
Sbjct: 210 VLLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 24  IFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPE 83
           +F ++    I H DLK EN LL       +KI DFG   S  L  R    + +  Y +PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPE 228
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI 127
           VL    YD  + D+WS G  L  M  G   F    +     K +
Sbjct: 229 VLLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SL----LHSRP--------KSTV 74
           SQ I HR+LK  N  +D S    +KI DFG +K+   SL    L S+          S +
Sbjct: 134 SQGIIHRNLKPXNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 75  GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ 134
           GT  Y+A EVL    +  +  D +S G+  +  +   YPF    +  N  K + R ++++
Sbjct: 192 GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKL-RSVSIE 247
Query: 135 YKIPDYVHISQDCRNLLSRIFV-ANPSRRITIKEIKSHPWF 174
           +  PD+          + R+ +  +P++R   + + +  W 
Sbjct: 248 FP-PDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 31/174 (17%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRP---KSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKI DFG ++ +   H         V T  Y APE++
Sbjct: 142 SANVLHRDLKPSNLLLNTTXD--LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 86  SRREYDGKLADVWSCGVTLYVML------------------VGAYPFEDQEDPKNFRKTI 127
              +   K  D+WS G  L  ML                  +G      QED        
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLK 259
Query: 128 SR--IMAVQY--KIP-DYVHISQDCR--NLLSRIFVANPSRRITIKEIKSHPWF 174
           +R  ++++ +  K+P + +  + D +  +LL ++   NP +RI +++  +HP+ 
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 33  ICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           I HRDL+  N  L   D +     K+ DF  S+ S+ HS     +G   ++APE +   E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV-HSV-SGLLGNFQWMAPETIGAEE 202
Query: 90  --YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             Y  K AD +S  + LY +L G  PF++    K     + R   ++  IP      +DC
Sbjct: 203 ESYTEK-ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP------EDC 255
Query: 148 ----RNLLSRIFVANPSRR 162
               RN++   +  +P +R
Sbjct: 256 PPRLRNVIELCWSGDPKKR 274

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 149 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  +  YV
Sbjct: 207 YKENV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 265
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 266 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 325
Query: 174 F 174
Sbjct: 326 I 326

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y   + D+WS G  +  M+     F  ++    + K I ++          +Q  +  YV
Sbjct: 196 YKENV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 254
Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V + S+RI++ E   HP+
Sbjct: 255 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 314

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI  FG ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 44/184 (23%)
Query: 30  SQQICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVL 85
           S++  HRDLK +N LL   D S  P LKI DFG +++  +  R     + T  Y  PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 86  SRREYDGKLADVWSCGVTLYVML--------------------------------VGAYP 113
               +     D+WS       ML                                V A P
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 114 FEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
              Q  PK   KT+ R++           +  +  +LL+ +   +P +RI+ K    HP+
Sbjct: 270 DWKQSFPKFRGKTLKRVLGAL--------LDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
Query: 174 FLKN 177
           F  N
Sbjct: 322 FSHN 325

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAY-IAPEVL 85
           SQ   HR+L   N LLD      +KI DFG +K+      + R +    +P +  APE L
Sbjct: 135 SQHYIHRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 86  SRREYDGKLA-DVWSCGVTLYVMLV 109
             +EY    A DVWS GVTLY +L 
Sbjct: 193 --KEYKFYYASDVWSFGVTLYELLT 215

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS--KSSLLHSRP-KSTVGTPAYIAPEVLS 86
           ++ I HRDLK  N  L       +KI DFG +  KS    S   +   G+  ++APEV+ 
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 87  RREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
            ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++      PD   + 
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKVR 251
Query: 145 QDCRNLLSRIFV 156
            +C   + R+  
Sbjct: 252 SNCPKRMKRLMA 263

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 36/119 (30%)
Query: 33  ICHRDLKLENTLLDGSPAPRLK---ICDFGYS--------------------------KS 63
           I HRD+K  N L +     RLK   + DFG +                          K 
Sbjct: 138 IVHRDVKPSNFLYN----RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKC 193
Query: 64  SLLHSRPKSTV---GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED 119
           S+  SR +      GTP + APEVL++        D+WS GV    +L G YPF    D
Sbjct: 194 SICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRL-KICDFGYSKS---SLLHSRPKSTVGTPAY-IAPEV 84
           +Q   HRDL   N LLD     RL KI DFG +K+        R +    +P +  APE 
Sbjct: 152 AQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 85  LSRREYDGKLA-DVWSCGVTLYVMLV 109
           L  +EY    A DVWS GVTLY +L 
Sbjct: 209 L--KEYKFYYASDVWSFGVTLYELLT 232

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 30  SQQICHRDLKLENTLLD-----------GSPAPRLKICDFGYSK-----SSLLHSRPKST 73
           S +I HRDLK +N L+            G+   R+ I DFG  K              + 
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 74  VGTPAYIAPEVL--SRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI 130
            GT  + APE+L  S +    +  D++S G   Y +L  G +PF D+   ++    I  I
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGI 268
Query: 131 MAV-QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++ + K      +  +  +L+S++   +P +R T  ++  HP F
Sbjct: 269 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTV-GTPAYIAPEVLS 86
           ++ I HRD+K  N LLD +  P  KI DFG SK  + L  +     V GT  YI PE   
Sbjct: 157 TRAIIHRDVKSINILLDENFVP--KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 87  RREYDGKLADVWSCGVTLYVML 108
           +     K +DV+S GV L+ +L
Sbjct: 215 KGRLTEK-SDVYSFGVVLFEVL 235

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGY----SKSSLLHSRPKSTVGTPAYIAPEVL 85
           ++ I HRDLK  N  L       +KI DFG     S+ S  H   + + G+  ++APEV+
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNT--VKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVI 182
Query: 86  SRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
             ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++      PD   +
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKV 238
Query: 144 SQDCRNLLSRIFV 156
             +C   + R+  
Sbjct: 239 RSNCPKRMKRLMA 251

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 30  SQQICHRDLKLENTLLD-----------GSPAPRLKICDFGYSK-----SSLLHSRPKST 73
           S +I HRDLK +N L+            G+   R+ I DFG  K              + 
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 74  VGTPAYIAPEVL--SRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI 130
            GT  + APE+L  S +    +  D++S G   Y +L  G +PF D+   ++    I  I
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGI 268
Query: 131 MAV-QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            ++ + K      +  +  +L+S++   +P +R T  ++  HP F
Sbjct: 269 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS--KSSLLHSRP-KSTVGTPAYIAPEVLS 86
           ++ I HRDLK  N  L       +KI DFG +  KS    S   +   G+  ++APEV+ 
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 87  RREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
            ++ +     +DV++ G+ LY ++ G  P+ +     N R  I  ++      PD   + 
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKVR 251
Query: 145 QDCRNLLSRIFV 156
            +C   + R+  
Sbjct: 252 SNCPKRMKRLMA 263

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTV-GTPAYIAPEVLS 86
           ++ I HRD+K  N LLD +  P  KI DFG SK  + L  +     V GT  YI PE   
Sbjct: 157 TRAIIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 87  RREYDGKLADVWSCGVTLYVML 108
           +     K +DV+S GV L+ +L
Sbjct: 215 KGRLTEK-SDVYSFGVVLFEVL 235

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI D G ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 47/195 (24%)
Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKS----TVGTPAYIAPE 83
           +  + HRDLK  N L+  +G    R+KI D G+++      +P +     V T  Y APE
Sbjct: 146 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFE-DQEDPKN----FRKTISRIMAVQ---- 134
           +L    +  K  D+W+ G     +L     F   QED K         + RI  V     
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPA 265
Query: 135 -------YKIPDYVHISQDCR-------------------------NLLSRIFVANPSRR 162
                   K+P++  + +D R                         +LL ++   +P +R
Sbjct: 266 DKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 325
Query: 163 ITIKEIKSHPWFLKN 177
           IT ++    P+FL++
Sbjct: 326 ITSEQAMQDPYFLED 340

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      L+I DFG ++ +         V T  Y APE++    
Sbjct: 149 SAGIIHRDLKPSNVAVNEDS--ELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWM 204
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +  +  D+WS G  +  +L G   F       ++   + RIM V
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPG----SDYIDQLKRIMEV 244

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI D G ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDGGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      L+I DFG ++ +         V T  Y APE++    
Sbjct: 149 SAGIIHRDLKPSNVAVNEDS--ELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWM 204
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +  +  D+WS G  +  +L G   F       ++   + RIM V
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPG----SDYIDQLKRIMEV 244

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI DF  ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 76/218 (34%), Gaps = 78/218 (35%)
Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKS-----------------------SLLHSR 69
           I HRDLK  N LL+   +  +K+CDFG +++                         L  +
Sbjct: 150 IIHRDLKPANCLLNQDCS--VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 70  PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVML----------VGAYPF----- 114
             S V T  Y APE++  +E   K  D+WS G     +L             +P      
Sbjct: 208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSS 267
Query: 115 ------------------EDQ-------------EDPKNFRK--TISRIMAVQYKIP--- 138
                              DQ             +D KN  K   I  I    ++ P   
Sbjct: 268 CFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINL 327
Query: 139 --DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              Y  IS D  NLL  +   NP++RITI +   HP+ 
Sbjct: 328 KQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 31  QQICHRDLKLENTLLDGSPAPRL-----------------KICDFGYSKSSLLHSRPKST 73
            Q+ H DLK EN L   S    L                 ++ DFG   ++  H    + 
Sbjct: 174 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--SATFDHEHHTTI 231
Query: 74  VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF---------- 123
           V T  Y  PEV+    +  +  DVWS G  L+    G   F+  E+ ++           
Sbjct: 232 VATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 290
Query: 124 -RKTISRIMAVQY----------KIPDYVHISQDCR-----------------NLLSRIF 155
               I R    +Y             D  ++ ++C+                 +L+ R+ 
Sbjct: 291 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML 350
Query: 156 VANPSRRITIKEIKSHPWFLKNLPRE 181
             +P++RIT+ E   HP+F    P E
Sbjct: 351 EFDPAQRITLAEALLHPFFAGLTPEE 376

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S  I HRDLK  N  L  +    LKI D G ++    H+  + T  V T  Y APE++  
Sbjct: 143 SADIIHRDLKPSN--LAVNEDCELKILDRGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 88  REYDGKLADVWSCGVTLYVMLVG--AYPFEDQ------------------------EDPK 121
             +  +  D+WS G  +  +L G   +P  D                         E  +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 122 NFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           N+ ++++++  + +    ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SLLHSRPKSTVGTPAY-IAPEVL 85
           +Q   HR+L   N LLD      +KI DFG +K+      + R +    +P +  APE L
Sbjct: 135 AQHYIHRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 86  SRREYDGKLA-DVWSCGVTLYVMLV 109
             +EY    A DVWS GVTLY +L 
Sbjct: 193 --KEYKFYYASDVWSFGVTLYELLT 215

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 30  SQQICHRDLKLENTLLD-----------GSPAPRLKICDFGYSK-----SSLLHSRPKST 73
           S +I HRDLK +N L+            G+   R+ I DFG  K      S   +   + 
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 74  VGTPAYIAPEVL-------SRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRK 125
            GT  + APE+L       ++R     + D++S G   Y +L  G +PF D+   ++   
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSI-DIFSMGCVFYYILSKGKHPFGDKYSRES--N 249
Query: 126 TISRIMAV-QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            I  I ++ + K      +  +  +L+S++   +P +R T  ++  HP F
Sbjct: 250 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 31  QQICHRDLKLENTLLDGSPAPRL-----------------KICDFGYSKSSLLHSRPKST 73
            Q+ H DLK EN L   S    L                 ++ DFG   ++  H    + 
Sbjct: 151 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--SATFDHEHHTTI 208
Query: 74  VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF---------- 123
           V T  Y  PEV+    +  +  DVWS G  L+    G   F+  E+ ++           
Sbjct: 209 VATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 267
Query: 124 -RKTISRIMAVQY----------KIPDYVHISQDCR-----------------NLLSRIF 155
               I R    +Y             D  ++ ++C+                 +L+ R+ 
Sbjct: 268 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML 327
Query: 156 VANPSRRITIKEIKSHPWFLKNLPRE 181
             +P++RIT+ E   HP+F    P E
Sbjct: 328 EFDPAQRITLAEALLHPFFAGLTPEE 353

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 33  ICHRDLKLENTLLDGSPAP----RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           I H D+K EN L++   +P    ++KI D G   +        +++ T  Y +PEVL   
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKT--ISRIMAVQYKIPDYV 141
            + G  AD+WS    ++ ++ G + FE  E     +    I++I+ +  ++P Y+
Sbjct: 211 PW-GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL 264

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 33  ICHRDLKLENTLLDGSPAP----RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           I H D+K EN L++   +P    ++KI D G   +        +++ T  Y +PEVL   
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKT--ISRIMAVQYKIPDYV 141
            + G  AD+WS    ++ ++ G + FE  E     +    I++I+ +  ++P Y+
Sbjct: 211 PW-GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL 264

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 31  QQICHRDLKLENTLLDGSPAPRL-----------------KICDFGYSKSSLLHSRPKST 73
            Q+ H DLK EN L   S    L                 ++ DFG   ++  H    + 
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--SATFDHEHHTTI 199
Query: 74  VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF---------- 123
           V T  Y  PEV+    +  +  DVWS G  L+    G   F+  E+ ++           
Sbjct: 200 VATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258
Query: 124 -RKTISRIMAVQY----------KIPDYVHISQDCR-----------------NLLSRIF 155
               I R    +Y             D  ++ ++C+                 +L+ R+ 
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML 318
Query: 156 VANPSRRITIKEIKSHPWFLKNLPRE 181
             +P++RIT+ E   HP+F    P E
Sbjct: 319 EFDPAQRITLAEALLHPFFAGLTPEE 344

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ +RDLK  N  L      ++KI DFG   S     +   + GT  Y++PE +S ++
Sbjct: 140 SKKLINRDLKPSNIFL--VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQD 197
Query: 90  YDGKLADVWSCGVTLYVML 108
           Y GK  D+++ G+ L  +L
Sbjct: 198 Y-GKEVDLYALGLILAELL 215

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL------LHSRPKSTVGTPAYIAPE 83
           S++  HRDL   N +LD      +K+ DFG ++  L      +H++  + +    ++A E
Sbjct: 152 SKKFVHRDLAARNCMLD--EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV-KWMALE 208
Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            L  +++  K +DVWS GV L+ +M  GA P+ D
Sbjct: 209 SLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPD 241

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      L+I DFG ++ +         V T  Y APE++    
Sbjct: 141 SAGIIHRDLKPSNVAVNEDC--ELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWM 196
Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV 133
           +  +  D+WS G  +  +L G   F       ++   + RIM V
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPG----SDYIDQLKRIMEV 236

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA------YIAPEVLSRR 88
           HRDL   N L+D +     K+ DFG S+  +L   P +   T        + APE ++ R
Sbjct: 174 HRDLAARNVLVDSNLV--CKVSDFGLSR--VLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 89  EYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP 138
            +    +DVWS GV ++ V+  G  P+ +  +    R  IS +    Y++P
Sbjct: 230 TFS-SASDVWSFGVVMWEVLAYGERPYWNMTN----RDVISSVEE-GYRLP 274

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA------YIAPEVLSRR 88
           HRDL   N L+D +     K+ DFG S+  +L   P +   T        + APE ++ R
Sbjct: 174 HRDLAARNVLVDSNLV--CKVSDFGLSR--VLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 89  EYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP 138
            +    +DVWS GV ++ V+  G  P+ +  +    R  IS +    Y++P
Sbjct: 230 TFS-SASDVWSFGVVMWEVLAYGERPYWNMTN----RDVISSVEE-GYRLP 274

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL--------LHSRPKSTVGTPAYIAP 82
           Q+  HRDL   N +LD S    +K+ DFG ++  L         H   +  V    + A 
Sbjct: 143 QKFVHRDLAARNCMLDESFT--VKVADFGLARDILDREYYSVQQHRHARLPV---KWTAL 197
Query: 83  EVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH 142
           E L    +  K +DVWS GV L+ +L    P     DP +    ++  +A   ++P   +
Sbjct: 198 ESLQTYRFTTK-SDVWSFGVLLWELLTRGAPPYRHIDPFD----LTHFLAQGRRLPQPEY 252
Query: 143 ISQDCRNLLSRIFVANPSRRITIK 166
                  ++ + + A+P+ R T +
Sbjct: 253 CPDSLYQVMQQCWEADPAVRPTFR 276

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	265
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-108
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	9e-79
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-74
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-59
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-59
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-58
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	7e-58
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-57
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-57
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-57
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-57
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-56
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-56
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-56
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-55
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-55
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-52
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-46
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-45
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-44
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-43
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-43
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-43
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	9e-43
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-42
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-41
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-41
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-41
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-40
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-40
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-40
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-40
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-40
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-40
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-40
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-40
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-40
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-40
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-39
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-39
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-39
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-39
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-39
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-39
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-39
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-39
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-39
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	8e-39
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-39
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-38
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-38
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-38
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-38
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-38
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-38
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-37
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-37
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-37
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-37
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-37
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-36
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-36
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-36
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-35
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-35
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-35
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-35
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-34
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-34
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-34
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-34
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-34
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	7e-34
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-33
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-33
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-33
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-33
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-33
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-33
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	9e-33
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-32
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-32
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-32
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-32
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-32
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-31
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-30
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-30
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-28
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-27
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-26
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-26
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-25
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-25
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-23
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-23
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-21
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-21
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-21
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-20
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-20
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-20
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-20
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-19
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-19
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-18
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-18
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-17
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-17
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-17
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-17
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-16
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-16
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	8e-16
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-15
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-15
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-15
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-15
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-15
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-15
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-15
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-15
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	7e-15
3niz_A	311	Rhodanese family protein; structural genomics, str	8e-15
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-14
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-14
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-14
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-14
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-14
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-14
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-13
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-13
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-13
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-12
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-10
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-10
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-09
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-09
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-07
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	7e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	8e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	8e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	9e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-04

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  317 bits (814), Expect = e-108
 Identities = 134/218 (61%), Positives = 168/218 (77%), Gaps = 1/218 (0%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL R+E
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDGK+ADVWSCGVTLYVMLVGAYPFED E+P+++RKTI RI++V+Y IPD + IS +C +
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKI 209
           L+SRIFVA+P+ RI+I EIK+H WFLKNLP +L   +      +E P   +QS++ I +I
Sbjct: 254 LISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQE-PEQPMQSLDTIMQI 312

Query: 210 VEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADEED 247
           + EA +P   +R +  F     +  D+ ++     E D
Sbjct: 313 ISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEID 350

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  239 bits (613), Expect = 9e-79
 Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 21/211 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLS 86
              I HRD+K EN LLD      LKI DFG +     ++R        GT  Y+APE+L 
Sbjct: 123 GIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAVQYKIPDYVHISQ 145
           RRE+  +  DVWSCG+ L  ML G  P++   D  + +     +    +  +  +  I  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK----KTYLNPWKKIDS 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTF---SLQS 202
               LL +I V NPS RITI +IK   W+ K L +             E+P+     +QS
Sbjct: 237 APLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQS 296

Query: 203 VEEITKIVEEAKVPPPVSRSIGGFGWGGEED 233
             + + +   ++ P        G GW  E  
Sbjct: 297 NLDFSPVNSASRTP--------GSGWSKEHH 319

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  227 bits (582), Expect = 1e-74
 Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLS 86
              I HRD+K EN LLD      LKI DFG +     ++R        GT  Y+APE+L 
Sbjct: 123 GIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAVQYKIPDYVHISQ 145
           RRE+  +  DVWSCG+ L  ML G  P++   D  + +     +    +  +  +  I  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK----KTYLNPWKKIDS 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
               LL +I V NPS RITI +IK   W+ K L +  
Sbjct: 237 APLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 273

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  189 bits (482), Expect = 2e-59
 Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSLLHSRPKSTVGTPAYIAPEV 84
            Q+I HRD+K  N L+       +KI DFG S       +LL +    TVGTPA++APE 
Sbjct: 155 YQKIIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSN----TVGTPAFMAPES 208

Query: 85  LS--RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH 142
           LS  R+ + GK  DVW+ GVTLY  + G  PF D+       K    I +   + PD   
Sbjct: 209 LSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK----IKSQALEFPDQPD 264

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           I++D ++L++R+   NP  RI + EIK HPW  +
Sbjct: 265 IAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  187 bits (478), Expect = 6e-59
 Identities = 61/157 (38%), Positives = 84/157 (53%), Gaps = 16/157 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPEVL 85
              + HRDLK EN LLD       KI DFG S        L +    + G+P Y APEV+
Sbjct: 129 RHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRT----SCGSPNYAAPEVI 182

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           S R Y G   D+WSCGV LY +L G  PF+D+  P  F+K    I    + IP+  ++++
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGGVFYIPE--YLNR 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
               LL  +   +P +R TIK+I+ H WF ++LP  L
Sbjct: 237 SVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  187 bits (478), Expect = 3e-58
 Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 16/157 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPEVL 85
             +I HRDLK EN LLD +    +KI DFG S      + L +    + G+P Y APEV+
Sbjct: 126 RHKIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKT----SCGSPNYAAPEVI 179

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           + + Y G   DVWSCG+ LYVMLVG  PF+D+  P  F+K    + +  Y +PD   +S 
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK----VNSCVYVMPD--FLSP 233

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
             ++L+ R+ VA+P +RITI+EI+  PWF  NLP  L
Sbjct: 234 GAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYL 270

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  185 bits (473), Expect = 7e-58
 Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 20/161 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSLLHSRPKSTVGTPAYIAP 82
           SQ I H+D+K  N LL       LKI   G +             +    + G+PA+  P
Sbjct: 127 SQGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCRT----SQGSPAFQPP 180

Query: 83  EVLS-RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV 141
           E+ +    + G   D+WS GVTLY +  G YPFE      N  K    I    Y IP   
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD----NIYKLFENIGKGSYAIPGD- 235

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
                  +LL  +    P++R +I++I+ H WF K  P   
Sbjct: 236 -CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAE 275

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  185 bits (472), Expect = 2e-57
 Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 8/155 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++I HRDLK EN LLD      +KI DFG+S    +  +  +  G P Y APE+   ++
Sbjct: 132 QKRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           YDG   DVWS GV LY ++ G+ PF+ Q   +   +    ++  +Y+IP Y+  S DC N
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER----VLRGKYRIPFYM--STDCEN 243

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE 184
           LL R  V NP +R T+++I    W       +  +
Sbjct: 244 LLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELK 278

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  183 bits (466), Expect = 3e-57
 Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 10/158 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
           S  I HRDL L N LL  +    +KI DFG +    +      T+ GTP YI+PE+ +R 
Sbjct: 130 SHGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  + +DVWS G   Y +L+G  PF+        + T+++++   Y++P    +S + +
Sbjct: 188 AHGLE-SDVWSLGCMFYTLLIGRPPFDT----DTVKNTLNKVVLADYEMPS--FLSIEAK 240

Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETA 186
           +L+ ++   NP+ R+++  +  HP+  +N   +  +  
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  182 bits (465), Expect = 5e-57
 Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 10/154 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL  +    LKI DFG+S  +   SR     GT  Y+ PE++  R 
Sbjct: 127 SKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRM 183

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K  D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD   +++  R+
Sbjct: 184 HDEK-VDLWSLGVLCYEFLVGKPPFEA----NTYQETYKRISRVEFTFPD--FVTEGARD 236

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELT 183
           L+SR+   NPS+R  ++E+  HPW   N  +   
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  182 bits (464), Expect = 7e-57
 Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +++ HRD+K EN L+       LKI DFG+S  +    R ++  GT  Y+ PE++  + 
Sbjct: 132 ERKVIHRDIKPENLLMGYKG--ELKIADFGWSVHAP-SLRRRTMCGTLDYLPPEMIEGKT 188

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K  D+W  GV  Y  LVG  PF+     +  R+    I+ V  K P ++  S   ++
Sbjct: 189 HDEK-VDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----IVNVDLKFPPFL--SDGSKD 241

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAI 189
           L+S++   +P +R+ +K +  HPW   N  R L    Q+ 
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQST 281

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  182 bits (463), Expect = 2e-56
 Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 11/159 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
             ++ HRDLKL N  L+      +KI DFG +         K  + GTP YIAPEVLS++
Sbjct: 133 RNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  +  DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    
Sbjct: 191 GHSFE-VDVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPK--HINPVAA 243

Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKN-LPRELTETA 186
           +L+ ++   +P+ R TI E+ +  +F    +P  L  T 
Sbjct: 244 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC 282

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  182 bits (464), Expect = 2e-56
 Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 21/159 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS---KSSLLHSRPKSTVGTPAYIAPEVLS 86
           +  + HRD+K EN L+D +    LK+ DFG     K ++         GT  Y  PE + 
Sbjct: 167 NCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIR 221

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
              Y G+ A VWS G+ LY M+ G  PFE  E           I+  Q        +S +
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EIIRGQVFFRQ--RVSSE 269

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK-NLPRELTE 184
           C++L+       PS R T +EI++HPW     LP+E  E
Sbjct: 270 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 308

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  183 bits (465), Expect = 2e-56
 Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 30/184 (16%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           ICHRD+K  N L+D +   R+K+ DFG S+      +      + GT  ++ PE  S   
Sbjct: 173 ICHRDVKPSNILMDKNG--RVKLSDFGESEYMVDKKIKG----SRGTYEFMPPEFFSNES 226

Query: 90  -YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV------- 141
            Y+G   D+WS G+ LYVM     PF  +    +  +  + I     + P          
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKI---SLVELFNNIRTKNIEYPLDRNHFLYPL 283

Query: 142 ----------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYY 191
                      +S +  + L      NP+ RIT ++   H W       +L E ++ +Y 
Sbjct: 284 TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYK 343

Query: 192 RKEN 195
           +++ 
Sbjct: 344 KRKK 347

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  186 bits (473), Expect = 3e-56
 Identities = 59/157 (37%), Positives = 81/157 (51%), Gaps = 16/157 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPEVL 85
              + HRDLK EN LLD       KI DFG S        L +    + G+P Y APEV+
Sbjct: 134 RHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRT----SCGSPNYAAPEVI 187

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           S R Y G   D+WS GV LY +L G  PF+D   P  F+K    I    +  P   +++ 
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK----ICDGIFYTPQ--YLNP 241

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
              +LL  +   +P +R TIK+I+ H WF ++LP+ L
Sbjct: 242 SVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYL 278

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  180 bits (458), Expect = 1e-55
 Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS---KSSLLHSRPKSTVGTPAYIAPEVLS 86
           S+ + HRD+K EN L+D       K+ DFG                  GT  Y  PE +S
Sbjct: 157 SRGVVHRDIKDENILIDLRRG-CAKLIDFGSGALLHDEPYTD----FDGTRVYSPPEWIS 211

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R +Y    A VWS G+ LY M+ G  PFE  +           I+  +   P   H+S D
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------EILEAELHFPA--HVSPD 259

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
           C  L+ R     PS R +++EI   PW      
Sbjct: 260 CCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  180 bits (459), Expect = 2e-55
 Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 11/159 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
             ++ HRDLKL N  L+      +KI DFG +         K  + GTP YIAPEVLS++
Sbjct: 159 RNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  +  DVWS G  +Y +LVG  PFE        ++T  RI   +Y IP   HI+    
Sbjct: 217 GHSFE-VDVWSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPK--HINPVAA 269

Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKN-LPRELTETA 186
           +L+ ++   +P+ R TI E+ +  +F    +P  L  T 
Sbjct: 270 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC 308

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  171 bits (436), Expect = 4e-52
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 22/154 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS----KSSLLHSRPKSTVGTPAYIAPEVL 85
            + I HRD+K EN ++       +K+ DFG +    +  L ++      GT  Y APEVL
Sbjct: 148 LKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLFYT----FCGTIEYCAPEVL 201

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
               Y G   ++WS GVTLY ++    PF +          +   +      P  V  S+
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCE----------LEETVEAAIHPPYLV--SK 249

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
           +  +L+S +    P RR T++++ + PW  + + 
Sbjct: 250 ELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  157 bits (398), Expect = 2e-46
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 12/156 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTPAYIAPEV 84
           +Q ICHRD+K EN L   + +  +K+ DFG SK     ++  +    +  GTP ++APEV
Sbjct: 186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV 245

Query: 85  LSRREYD-GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYV 141
           L+      G   D WS GV L+++L+GA PF    D     +    ++  +     P+Y 
Sbjct: 246 LNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ----VLNKKLCFENPNYN 301

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            +S   R+LLS +   N   R        HPW  + 
Sbjct: 302 VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF 337

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  154 bits (391), Expect = 1e-45
 Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 19/161 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLS 86
              I H DLK  N L+       LK+ DFG +      +      S VGT  Y+ PE + 
Sbjct: 145 QHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201

Query: 87  RREYD----------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
                             +DVWS G  LY M  G  PF+   +       +  I+   ++
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHE 258

Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           I       +D +++L      +P +RI+I E+ +HP+    
Sbjct: 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  152 bits (385), Expect = 2e-44
 Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 19/163 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLS 86
              I H DLK  N L+       LK+ DFG +      +      S VGT  Y+ PE + 
Sbjct: 126 QHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182

Query: 87  RREYD----------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
                             +DVWS G  LY M  G  PF+   +  +    +  I+   ++
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHE 239

Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
           I       +D +++L      +P +RI+I E+ +HP+      
Sbjct: 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  151 bits (382), Expect = 1e-43
 Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 20/198 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLS 86
              I H DLK  N L+       LK+ DFG +      +      S VG   Y+ PE + 
Sbjct: 173 QHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229

Query: 87  RREYD----------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
                             +DVWS G  LY M  G  PF+   +  +    +  I+   ++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHE 286

Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENP 196
           I       +D +++L      +P +RI+I E+ +HP+  +     + + A+      +  
Sbjct: 287 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV-QIQTHPVNQMAKGTTEEMKYV 345

Query: 197 TFSLQSVEEITKIVEEAK 214
              L  +     I++ AK
Sbjct: 346 LGQLVGLNSPNSILKAAK 363

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  147 bits (374), Expect = 2e-43
 Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 9/153 (5%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              + HRDLK EN L    SP   LK+ DFG +         ++ VGTP Y++P+VL   
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL-EG 182

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQD 146
            Y G   D WS GV +YV+L G  PF    D +   K    I    +     D++++S  
Sbjct: 183 LY-GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK----IREGTFTFPEKDWLNVSPQ 237

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
             +L+ R+   +P +RIT  +   H WF K L 
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  146 bits (371), Expect = 6e-43
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           SQ + H+DLK EN L    SP   +KI DFG ++         +  GT  Y+APEV  +R
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF-KR 200

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYVHISQDC 147
           +      D+WS GV +Y +L G  PF      +  +K        +     +   ++   
Sbjct: 201 DV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK----ATYKEPNYAVECRPLTPQA 255

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            +LL ++   +P RR +  ++  H WF
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWF 282

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  147 bits (372), Expect = 9e-43
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR--LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
              I HR++K  N +       +   K+ DFG ++      +  S  GT  Y+ P++  R
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189

Query: 88  REYD-------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY----- 135
                      G   D+WS GVT Y    G+ PF   E P+  ++ + +I+  +      
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249

Query: 136 --------------KIPDYVHISQDCRN----LLSRIFVANPSRRITIKEIKSHPWFLKN 177
                          +P    +S+  +     +L+ I  A+  +     +  +    + +
Sbjct: 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309

Query: 178 LPR 180
              
Sbjct: 310 RGN 312

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  148 bits (376), Expect = 2e-42
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN LL        +KI DFG+SK     S  ++  GTP Y+APEVL   
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 316

Query: 89  EYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
                 +  D WS GV L++ L G  PF +     + +  I+      +    +  +S+ 
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS-GKYNFIPEVWAEVSEK 375

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
             +L+ ++ V +P  R T +E   HPW      + 
Sbjct: 376 ALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  146 bits (369), Expect = 8e-42
 Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 26/163 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              + H  L+  + +LD      + +  F +            +  +  +  PE+ +RR 
Sbjct: 224 HYGLVHTYLRPVDIVLDQRG--GVFLTGFEHLVR---DGARVVSSVSRGFEPPELEARRA 278

Query: 90  ----------YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD 139
                           D W+ G+ +Y +     P                          
Sbjct: 279 TISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCK-------- 330

Query: 140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
             +I Q  R LL          R+   +    P + + L  EL
Sbjct: 331 --NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY-EQLRTEL 370

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  143 bits (363), Expect = 1e-41
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HR+LK EN LL   +    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQD 146
            Y  K  D+W+CGV LY++LVG  PF D++  + + +    I A  Y    P++  ++ +
Sbjct: 183 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ----IKAGAYDYPSPEWDTVTPE 237

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
            ++L+  +   NP +RIT  +    PW       
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  143 bits (362), Expect = 2e-41
 Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 13/160 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++    
Sbjct: 142 KLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 199

Query: 90  YD-----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVH 142
            D     GK  D+WS GV +Y +L G+ PF  ++     R     IM+  Y+   P++  
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM----IMSGNYQFGSPEWDD 255

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
            S   ++L+SR  V  P +R T +E  +HP+F + +  E+
Sbjct: 256 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  143 bits (362), Expect = 4e-41
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN LL        +KI DFG+SK     S  ++  GTP Y+APEVL   
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 191

Query: 89  EYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKN-FRKTISRIMAVQYKIPDYV--HI 143
                 +  D WS GV L++ L G  PF +     +   +    I + +Y     V   +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ----ITSGKYNFIPEVWAEV 247

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           S+   +L+ ++ V +P  R T +E   HPW 
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 278

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  144 bits (366), Expect = 2e-40
 Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 9/151 (5%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN LL+       +KI DFG S     +++ K  +GT  YIAPEVL R 
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RG 197

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYVHISQD 146
            Y  +  DVWS GV LY++L G  PF  + +    ++    +      + +P +  IS D
Sbjct: 198 TY-DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR----VETGKYAFDLPQWRTISDD 252

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            ++L+ ++   +PS RIT  +   HPW  K 
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  141 bits (357), Expect = 2e-40
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 7/152 (4%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSR 87
           S  I HRD+K EN L         LK+ DFG++K         ++   TP Y+APEVL  
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGP 203

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQ 145
            +YD K  D+WS GV +Y++L G  PF              RI   QY    P++  +S+
Sbjct: 204 EKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 262

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           D + L+  +   +P+ R+TI +  +HPW  ++
Sbjct: 263 DAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  140 bits (356), Expect = 2e-40
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 8/155 (5%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSR 87
              + HRDLK EN L  D +    +KI DFG+++     ++P  T   T  Y APE+L++
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF---EDQEDPKNFRKTISRIMAVQY--KIPDYVH 142
             YD +  D+WS GV LY ML G  PF   +      +  + + +I    +  +   + +
Sbjct: 184 NGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           +SQ+ ++L+  +   +P++R+ +  ++ + W    
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  139 bits (353), Expect = 4e-40
 Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN LL+       +KI DFG S     +++ K  +GT  YIAPEVL R 
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RG 197

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQD 146
            Y  +  DVWS GV LY++L G  PF  + +    ++    +   +Y   +P +  IS D
Sbjct: 198 TY-DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR----VETGKYAFDLPQWRTISDD 252

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
            ++L+ ++   +PS RIT  +   HPW  K    E
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  139 bits (353), Expect = 4e-40
 Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 25/162 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---------------SLLHSRPKSTV 74
           SQ I HRDLK  N  +D S    +KI DFG +K+                       S +
Sbjct: 134 SQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191

Query: 75  GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ 134
           GT  Y+A EVL    +  +  D++S G+  + M+         E     +K    + +V 
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKK----LRSVS 245

Query: 135 YKIPDYV--HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            + P     +  +  + ++  +   +P++R   + + +  W 
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  139 bits (352), Expect = 5e-40
 Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 9/149 (6%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S++I H DLK EN +L     P PR+K+ DFG +      +  K+  GTP ++APE+++ 
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
               G  AD+WS GV  Y++L GA PF  +   +        I AV Y   +  + + S+
Sbjct: 186 EPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTN----ISAVNYDFDEEYFSNTSE 240

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++ + R+ V +P RR+TI +   H W 
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  143 bits (363), Expect = 6e-40
 Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 9/151 (5%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRD+K EN LL + +    +KI DFG S       + +  +GT  YIAPEVL ++
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KK 222

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYVHISQD 146
           +Y  +  DVWSCGV +Y++L G  PF  Q D    +K    +      +   D+ +IS +
Sbjct: 223 KY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKK----VEKGKYYFDFNDWKNISDE 277

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            + L+  +   + ++R T +E  +  W  K 
Sbjct: 278 AKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  139 bits (353), Expect = 7e-40
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 9/149 (6%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN +L     P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
               G  AD+WS GV  Y++L GA PF      +        I +V Y   +  + H S+
Sbjct: 193 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLAN----ITSVSYDFDEEFFSHTSE 247

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++ + ++ V    +R+TI+E   HPW 
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  141 bits (357), Expect = 7e-40
 Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 4/151 (2%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY    P++  +S++
Sbjct: 239 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 297

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            + L+  +    P++R+TI E  +HPW +++
Sbjct: 298 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  142 bits (361), Expect = 8e-40
 Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
             +I HRDLK EN LL+  S    ++I DFG S       + K  +GT  YIAPEVL   
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HG 202

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYVHISQD 146
            Y  +  DVWS GV LY++L G  PF    +    +K    +      +++P +  +S+ 
Sbjct: 203 TY-DEKCDVWSTGVILYILLSGCPPFNGANEYDILKK----VEKGKYTFELPQWKKVSES 257

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
            ++L+ ++    PS RI+ ++   H W       ++
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 293

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  139 bits (352), Expect = 1e-39
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 8/148 (5%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I H DLK +N LL    P   +KI DFG S+        +  +GTP Y+APE+L+  
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
                  D+W+ G+  Y++L    PF  +++ + +      I  V     +  +  +SQ 
Sbjct: 209 PI-TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN----ISQVNVDYSEETFSSVSQL 263

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWF 174
             + +  + V NP +R T +   SH W 
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWL 291

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  139 bits (352), Expect = 1e-39
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 9/149 (6%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQ 145
               G  AD+WS GV  Y++L GA PF      +        + AV Y  +   + + S 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLAN----VSAVNYEFEDEYFSNTSA 246

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++ + R+ V +P +R+TI++   HPW 
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  138 bits (351), Expect = 1e-39
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST---VGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K     S+       VGT  Y++PE+L+
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 205

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +    K +D+W+ G  +Y ++ G  PF    +   F+K    I+ ++Y  P+       
Sbjct: 206 EKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258

Query: 147 CRNLLSRIFVANPSRRITIK------EIKSHPWF 174
            R+L+ ++ V + ++R+  +       +K+HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  142 bits (360), Expect = 2e-39
 Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 9/155 (5%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN LL        +KI DFG S       + K  +GT  YIAPEVL R+
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RK 212

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYVHISQD 146
           +Y  +  DVWS GV L+++L G  PF  Q D +  RK    +      +  P++ ++S+ 
Sbjct: 213 KY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK----VEKGKYTFDSPEWKNVSEG 267

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
            ++L+ ++   +  RRI+ ++   HPW  +   ++
Sbjct: 268 AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKK 302

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  140 bits (354), Expect = 2e-39
 Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 38/221 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR--LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
              I HR++K  N +       +   K+ DFG ++      +  S  GT  Y+ P++  R
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189

Query: 88  REYD-------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY----- 135
                      G   D+WS GVT Y    G+ PF   E P+  ++ + +I+  +      
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249

Query: 136 --------------KIPDYVHISQDCR----NLLSRIFVANPSRRITIKEIKSHPWFLKN 177
                          +P    +S+  +     +L+ I  A+  +     +  +    + +
Sbjct: 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309

Query: 178 LP----RELTETAQAIYYRKENPTFS--LQSVEEITKIVEE 212
                   L +      Y     T +   + V + TKI+  
Sbjct: 310 RMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKIISS 350

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  139 bits (351), Expect = 3e-39
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +++I H DLK EN +L     P P +K+ DFG +         K+  GTP ++APE+++ 
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
               G  AD+WS GV  Y++L GA PF      +        I AV Y   +  +   S+
Sbjct: 193 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLAN----ITAVSYDFDEEFFSQTSE 247

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++ + ++ V    +R+TI+E   HPW 
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  138 bits (351), Expect = 3e-39
 Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 8/151 (5%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HR+LK EN LL   +    +K+ DFG +             GTP Y++PEVL + 
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQD 146
            Y  K  D+W+CGV LY++LVG  PF D++  + + +    I A  Y    P++  ++ +
Sbjct: 206 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ----IKAGAYDYPSPEWDTVTPE 260

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            ++L+  +   NP +RIT  +    PW    
Sbjct: 261 AKSLIDSMLTVNPKKRITADQALKVPWICNR 291

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  138 bits (350), Expect = 3e-39
 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 7/150 (4%)

Query: 30  SQQICHRDLKLENTLLDGSP--APRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLS 86
           +Q + HRDLK  N L          ++ICDFG++K     +    T   T  ++APEVL 
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE 193

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHIS 144
           R+ YD    D+WS GV LY ML G  PF +  D     + ++RI + ++      +  +S
Sbjct: 194 RQGYD-AACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSGKFSLSGGYWNSVS 251

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              ++L+S++   +P +R+T   +  HPW 
Sbjct: 252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  138 bits (350), Expect = 4e-39
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              I H DLK EN L     A ++KI DFG ++      + K   GTP ++APEV+   +
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV-NYD 263

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
           +     D+WS GV  Y++L G  PF    D     +T++ I+A ++  +  ++  IS++ 
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDND----AETLNNILACRWDLEDEEFQDISEEA 319

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKEN 195
           +  +S++ +   S RI+  E   HPW L +       +AQ    R  +
Sbjct: 320 KEFISKLLIKEKSWRISASEALKHPW-LSDHKLHSRLSAQKKKNRGSD 366

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  136 bits (345), Expect = 8e-39
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 11/152 (7%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEVLSR 87
              I HRDLK EN L        ++ I DFG SK  +  +    +  GTP Y+APEVL++
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK--MEQNGIMSTACGTPGYVAPEVLAQ 181

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQ 145
           + Y  K  D WS GV  Y++L G  PF ++ + K F K    I    Y+   P +  IS+
Sbjct: 182 KPY-SKAVDCWSIGVITYILLCGYPPFYEETESKLFEK----IKEGYYEFESPFWDDISE 236

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
             ++ +  +   +P+ R T ++  SHPW   N
Sbjct: 237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  138 bits (349), Expect = 8e-39
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 7/150 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              I H D+K EN + +   A  +KI DFG +         K T  T  + APE++ R  
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREP 226

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
             G   D+W+ GV  YV+L G  PF  ++D     +T+  +    +      +  +S + 
Sbjct: 227 V-GFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETLQNVKRCDWEFDEDAFSSVSPEA 281

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           ++ +  +    P +R+T+ +   HPW   +
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  136 bits (345), Expect = 9e-39
 Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 17/160 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----------VGTPAY 79
           ++   HRDLK  N LL      +  + D G    + +H                  T +Y
Sbjct: 152 AKGYAHRDLKPTNILLGDEG--QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209

Query: 80  IAPEVLSRREYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI 137
            APE+ S + +    +  DVWS G  LY M+ G  P++      +   +++  +  Q  I
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---SVALAVQNQLSI 266

Query: 138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           P     S     LL+ +   +P +R  I  + S    L+ 
Sbjct: 267 PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  137 bits (348), Expect = 1e-38
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 13/154 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           +  I HRDLK EN LLD +    +++ DFG+S       + +   GTP Y+APE+L    
Sbjct: 218 ANNIVHRDLKPENILLDDNMQ--IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275

Query: 90  YD-----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV--H 142
            +     GK  D+W+CGV L+ +L G+ PF  +      R     IM  QY+        
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSSPEWDD 331

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
            S   ++L+SR+   +P  R+T ++   HP+F +
Sbjct: 332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  137 bits (348), Expect = 1e-38
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 12/150 (8%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +Q+I HRD+K +N LLD  G     + I DF  +      ++  +  GT  Y+APE+ S 
Sbjct: 133 NQRIIHRDMKPDNILLDEHG----HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188

Query: 88  REYDG--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           R+  G     D WS GVT Y +L G  P+  +    + ++ +          P     SQ
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-TSSKEIVHTFETTVVTYPSA--WSQ 245

Query: 146 DCRNLLSRIFVANPSRRI-TIKEIKSHPWF 174
           +  +LL ++   NP +R   + ++++ P+ 
Sbjct: 246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  136 bits (345), Expect = 1e-38
 Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 25/167 (14%)

Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-------------V 74
                I HRDLK+EN LL       +K+CDFG + +   +     +              
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQG--TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211

Query: 75  GTPAYIAPEV--LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA 132
            TP Y  PE+  L      G+  D+W+ G  LY++    +PFED            RI+ 
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG--------AKLRIVN 263

Query: 133 VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            +Y IP +        +L+  +   NP  R++I E+      +    
Sbjct: 264 GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  136 bits (344), Expect = 1e-38
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 7/147 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I H D++ EN +     +  +KI +FG ++        +     P Y APEV     
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
                 D+WS G  +YV+L G  PF  + +    ++ I  IM  +Y      +  IS + 
Sbjct: 180 V-STATDMWSLGTLVYVLLSGINPFLAETN----QQIIENIMNAEYTFDEEAFKEISIEA 234

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF 174
            + + R+ V     R+T  E   HPW 
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWL 261

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  137 bits (345), Expect = 2e-38
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 9/157 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+ + H     +N  +      RL + D        + +R  ++     Y   E L+   
Sbjct: 212 SKGLVHGHFTPDNLFIMPDG--RLMLGDVSALWK--VGTRGPASSVPVTYAPREFLNAST 267

Query: 90  YD-GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF---RKTISRIMAVQYKIPDYVHISQ 145
                  + W  G+++Y +     PF            R ++               +  
Sbjct: 268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPD 327

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
             + L+ R    +  RR+   E    P F   L  E+
Sbjct: 328 FVKTLIGRFLNFDRRRRLLPLEAMETPEF-LQLQNEI 363

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  140 bits (353), Expect = 5e-38
 Identities = 45/213 (21%), Positives = 75/213 (35%), Gaps = 27/213 (12%)

Query: 30  SQQICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
             +I HRDLK EN +L  G      KI D GY+K           VGT  Y+APE+L ++
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI--------------SRIMAVQ 134
           +Y     D WS G   +  + G  PF     P  +   +              +  +   
Sbjct: 199 KYTVT-VDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFS 257

Query: 135 YKIPDYVHISQDCRNLLSRIF----VANPSRRITIKEIKSHPWFLKNLPRELTETAQAIY 190
             +P   H+S      L R      + +  +R T  +  +   F + L   L+    ++ 
Sbjct: 258 SVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCF-QALDSILSLKLLSVM 316

Query: 191 YRKENPTFSLQSVEEIT------KIVEEAKVPP 217
                   +    E          + ++  +P 
Sbjct: 317 NMVSGRVHTYPVTENENLQNLKSWLQQDTGIPE 349

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  133 bits (336), Expect = 7e-38
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 11/151 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
              + HRDLK  N  LDG     +K+ DFG ++  +   S  K+ VGTP Y++PE ++R 
Sbjct: 134 GHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIPDYVHISQDC 147
            Y+ K +D+WS G  LY +     PF       + ++   +I   ++ +IP     S + 
Sbjct: 192 SYNEK-SDIWSLGCLLYELCALMPPFTA----FSQKELAGKIREGKFRRIPY--RYSDEL 244

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL 178
             +++R+       R +++EI  +P  L++ 
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLILEHH 275

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  134 bits (340), Expect = 1e-37
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSR 87
              I HRD+K    LL     +  +K+  FG +             VGTP ++APEV+ R
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQ 145
             Y GK  DVW CGV L+++L G  PF   ++     +    I+  +YK     + HIS+
Sbjct: 208 EPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWSHISE 261

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
             ++L+ R+ + +P+ RIT+ E  +HPW  + 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKER 293

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  133 bits (336), Expect = 1e-37
 Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ +RDLK  N  L  +   ++KI DFG   S     +   + GT  Y++PE +S ++
Sbjct: 140 SKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD 197

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y  +  D+++ G+ L  +L       +        K  + +      I D     +  + 
Sbjct: 198 YGKE-VDLYALGLILAELLHVCDTAFETS------KFFTDLR--DGIISD--IFDKKEKT 246

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
           LL ++    P  R    EI       K  P
Sbjct: 247 LLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  134 bits (339), Expect = 1e-37
 Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN L    +P   LKI DFG SK        K+  GTP Y APE+L   
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC 225

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQD 146
            Y G   D+WS G+  Y++L G  PF D+   +       RI+  +Y    P +  +S +
Sbjct: 226 AY-GPEVDMWSVGIITYILLCGFEPFYDERGDQF---MFRRILNCEYYFISPWWDEVSLN 281

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
            ++L+ ++ V +P +R+T  +   HPW      
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  137 bits (347), Expect = 2e-37
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
                H DLK EN +     +  LK+ DFG +         K T GT  + APEV   + 
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 332

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC 147
             G   D+WS GV  Y++L G  PF  + D     +T+  + +  +      +  IS+D 
Sbjct: 333 V-GYYTDMWSVGVLSYILLSGLSPFGGEND----DETLRNVKSCDWNMDDSAFSGISEDG 387

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           ++ + ++ +A+P+ R+TI +   HPW    
Sbjct: 388 KDFIRKLLLADPNTRMTIHQALEHPWLTPG 417

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  135 bits (342), Expect = 3e-37
 Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 15/155 (9%)

Query: 30  SQQICHRDLKLENTLL----DGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYIAPEV 84
              + HR+LK EN LL     G+    +K+ DFG +       +      GTP Y++PEV
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAA---VKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVH 142
           L +  Y GK  D+W+CGV LY++LVG  PF D++  + +++    I A  Y    P++  
Sbjct: 185 LRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ----IKAGAYDFPSPEWDT 239

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
           ++ + ++L++++   NPS+RIT  E   HPW    
Sbjct: 240 VTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  131 bits (332), Expect = 1e-36
 Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
            ++I HRD+K +N  L       +++ DFG ++  +      ++ +GTP Y++PE+   +
Sbjct: 143 DRKILHRDIKSQNIFLTKDG--TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYVHISQDC 147
            Y+ K +D+W+ G  LY +    + FE      + +  + +I++  +  +    H S D 
Sbjct: 201 PYNNK-SDIWALGCVLYELCTLKHAFEA----GSMKNLVLKIISGSFPPVSL--HYSYDL 253

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEIT 207
           R+L+S++F  NP  R ++  I    +  K + + L+    A         F L++  +  
Sbjct: 254 RSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIA-------EEFCLKTFSKFG 306

Query: 208 KIVEEAKVPPPVSRSI 223
                AK P     SI
Sbjct: 307 SQPIPAKRPASGQNSI 322

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  131 bits (331), Expect = 2e-36
 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 19/153 (12%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
           S  I +RDLK EN LLD  G     +K+ DFG SK S+ H +   +  GT  Y+APEV++
Sbjct: 144 SLGIIYRDLKPENILLDEEG----HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           RR +  + AD WS GV ++ ML G  PF+     K+ ++T++ I+  +  +P +  +S +
Sbjct: 200 RRGH-TQSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPE 252

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            ++LL  +F  NP+ R+      ++EIK H +F
Sbjct: 253 AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  128 bits (325), Expect = 7e-36
 Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 28/185 (15%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSK--------SSLLHSRPKSTVGTPAY 79
           ++ I HRDLK EN L +     +P +KICDF            S +      +  G+  Y
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSP-VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187

Query: 80  IAPEVLSRREYD----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY 135
           +APEV+     +     K  D+WS GV LY++L G  PF  +              A Q 
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247

Query: 136 KI-------------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
            +              D+ HIS   ++L+S++ V +  +R++  ++  HPW     P   
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307

Query: 183 TETAQ 187
             T  
Sbjct: 308 LPTPM 312

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  128 bits (325), Expect = 1e-35
 Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 19/153 (12%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
            + I +RDLK EN +L+  G     +K+ DFG  K S+       T  GT  Y+APE+L 
Sbjct: 139 QKGIIYRDLKPENIMLNHQG----HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R  +  +  D WS G  +Y ML GA PF  +    N +KTI +I+  +  +P Y  ++Q+
Sbjct: 195 RSGH-NRAVDWWSLGALMYDMLTGAPPFTGE----NRKKTIDKILKCKLNLPPY--LTQE 247

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            R+LL ++   N + R+        E+++HP+F
Sbjct: 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  129 bits (327), Expect = 1e-35
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 16/155 (10%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLH--SRPKSTVGTPAYIAPEVL 85
              I +RD+KLEN LLD  G     + + DFG SK  +     R     GT  Y+AP+++
Sbjct: 177 KLGIIYRDIKLENILLDSNG----HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232

Query: 86  SRREY-DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
              +    K  D WS GV +Y +L GA PF    +  +  +   RI+  +   P    +S
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE--MS 290

Query: 145 QDCRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
              ++L+ R+ + +P +R+        EIK H +F
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  128 bits (324), Expect = 1e-35
 Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 20/152 (13%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S+ I +RDLK EN LLD  G     +KI DFG++K   +     +  GTP YIAPEV+S 
Sbjct: 124 SKDIIYRDLKPENILLDKNG----HIKITDFGFAK--YVPDVTYTLCGTPDYIAPEVVST 177

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           + Y  K  D WS G+ +Y ML G  PF D  +     KT  +I+  + + P     ++D 
Sbjct: 178 KPY-NKSIDWWSFGILIYEMLAGYTPFYD-SNTM---KTYEKILNAELRFPP--FFNEDV 230

Query: 148 RNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           ++LLSR+   + S+R+       +++K+HPWF
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  128 bits (324), Expect = 8e-35
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 34/179 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAP-----------RLKICDFGYSK-----SSLLHSRPKST 73
           S +I HRDLK +N L+  S              R+ I DFG  K      S   +   + 
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192

Query: 74  VGTPAYIAPEVLSRREYD------GKLADVWSCGVTLYVMLVGAY-PFEDQEDPKNFRKT 126
            GT  + APE+L             +  D++S G   Y +L     PF D+         
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS------R 246

Query: 127 ISRIMAVQYKIPDYV-----HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
            S I+   + + +        +  +  +L+S++   +P +R T  ++  HP F     +
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  126 bits (319), Expect = 1e-34
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 20/152 (13%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S  + +RDLK EN L+D  G     +++ DFG++K   +  R  +  GTP  +APE++  
Sbjct: 159 SLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR--VKGRTWTLCGTPEALAPEIILS 212

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           + Y  K  D W+ GV +Y M  G  PF   + P    +   +I++ + + P   H S D 
Sbjct: 213 KGY-NKAVDWWALGVLIYEMAAGYPPFFA-DQPI---QIYEKIVSGKVRFPS--HFSSDL 265

Query: 148 RNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           ++LL  +   + ++R       + +IK+H WF
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  127 bits (320), Expect = 2e-34
 Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 19/165 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SLLHSRPKSTVGTPAYIAPEVLSR 87
              + H  L+  + +LD      + +  F +     +   S        P   A  +L  
Sbjct: 229 HYGLVHTYLRPVDIVLD--QRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPF 286

Query: 88  REYDGKL----ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
            ++   L     D W+ G+ +Y +     P  D                         +I
Sbjct: 287 GQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSC----------KNI 336

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQA 188
            Q  R LL          R+   +    P + + L  EL+     
Sbjct: 337 PQPVRALLEGFLRYPKEDRLLPLQAMETPEY-EQLRTELSAALPL 380

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  125 bits (316), Expect = 2e-34
 Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 19/153 (12%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
           S+ + +RD+KLEN +LD  G     +KI DFG  K  +       T  GTP Y+APEVL 
Sbjct: 123 SRDVVYRDIKLENLMLDKDG----HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
             +Y G+  D W  GV +Y M+ G  PF +Q+  + F      I+  + + P    +S +
Sbjct: 179 DNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILMEEIRFPRT--LSPE 231

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            ++LL+ +   +P +R+       KE+  H +F
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  124 bits (314), Expect = 5e-34
 Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 15/149 (10%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
           S+ I +RDLKL+N LLD  G     +KI DFG  K ++L     +T  GTP YIAPE+L 
Sbjct: 136 SKGIVYRDLKLDNILLDKDG----HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL 191

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            ++Y     D WS GV LY ML+G  PF  Q++ + F      I       P +  + ++
Sbjct: 192 GQKY-NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS----IRMDNPFYPRW--LEKE 244

Query: 147 CRNLLSRIFVANPSRRITIK-EIKSHPWF 174
            ++LL ++FV  P +R+ ++ +I+ HP F
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLF 273

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  124 bits (314), Expect = 6e-34
 Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 19/153 (12%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
           S+ I +RDLKL+N +LD  G     +KI DFG  K ++       T  GTP YIAPE+++
Sbjct: 139 SKGIIYRDLKLDNVMLDSEG----HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA 194

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            + Y GK  D W+ GV LY ML G  PFE +++ + F+     IM      P    +S++
Sbjct: 195 YQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHNVAYPKS--MSKE 247

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
              +   +   +P +R+       ++IK H +F
Sbjct: 248 AVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  125 bits (315), Expect = 7e-34
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 18/152 (11%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
           S  I +RDLK EN LLD  G     + + DFG  K ++ H+   ST  GTP Y+APEVL 
Sbjct: 157 SLNIVYRDLKPENILLDSQG----HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           ++ Y  +  D W  G  LY ML G  PF  +   + +      I+    ++    +I+  
Sbjct: 213 KQPY-DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN----ILNKPLQLKP--NITNS 265

Query: 147 CRNLLSRIFVANPSRRI----TIKEIKSHPWF 174
            R+LL  +   + ++R+       EIKSH +F
Sbjct: 266 ARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  124 bits (313), Expect = 1e-33
 Identities = 51/152 (33%), Positives = 70/152 (46%), Gaps = 16/152 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            + I +RDLKL+N LLD       K+ DFG  K  + +    +T  GTP YIAPE+L   
Sbjct: 142 DKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y G   D W+ GV LY ML G  PFE + +   F      I+  +   P    + +D  
Sbjct: 200 LY-GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILNDEVVYPT--WLHEDAT 252

Query: 149 NLLSRIFVANPSRRI------TIKEIKSHPWF 174
            +L      NP+ R+          I  HP+F
Sbjct: 253 GILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  124 bits (314), Expect = 1e-33
 Identities = 58/155 (37%), Positives = 77/155 (49%), Gaps = 17/155 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL--HSRPKSTVGTPAYIAPEVLSR 87
           S    HRD+K +N LLD S    LK+ DFG           R  + VGTP YI+PEVL  
Sbjct: 186 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243

Query: 88  REYD---GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYVH 142
           +  D   G+  D WS GV LY MLVG  PF       +   T S+IM        PD   
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD----SLVGTYSKIMNHKNSLTFPDDND 299

Query: 143 ISQDCRNLLSRIFVANPSRRIT---IKEIKSHPWF 174
           IS++ +NL+   F+ +   R+    ++EIK H +F
Sbjct: 300 ISKEAKNLICA-FLTDREVRLGRNGVEEIKRHLFF 333

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  125 bits (315), Expect = 2e-33
 Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 17/156 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
                HRD+K +N L+D +    +++ DFG     +     +S+  VGTP YI+PE+L  
Sbjct: 193 QLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250

Query: 88  REYD----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYV 141
            E      G   D WS GV +Y ML G  PF  +    +  +T  +IM    +++ P  V
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE----SLVETYGKIMNHKERFQFPTQV 306

Query: 142 -HISQDCRNLLSRIFVANPSR--RITIKEIKSHPWF 174
             +S++ ++L+ R+  +   R  +  I++ K HP+F
Sbjct: 307 TDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  124 bits (314), Expect = 2e-33
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 15/156 (9%)

Query: 30  SQQICHRDLKLENTLL---DGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAP 82
           S  I HRDLK  N L+   +     +  I DFG  K         SR     GT  +IAP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195

Query: 83  EVLSRREYD--GKLADVWSCGVTLYVMLVGAY-PFEDQEDPKNFRKTISRIMAVQYKIPD 139
           E+LS    +      D++S G   Y ++     PF         R+    + A       
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ----RQANILLGACSLDCLH 251

Query: 140 Y-VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              H     R L+ ++   +P +R + K +  HP+F
Sbjct: 252 PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  122 bits (308), Expect = 4e-33
 Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
            + I +RDLKL+N LLD  G     +K+ D+G  K  L      ST  GTP YIAPE+L 
Sbjct: 128 ERGIIYRDLKLDNVLLDSEG----HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 183

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIMAVQYKIPDYV 141
             +Y G   D W+ GV ++ M+ G  PF      D  D          I+  Q +IP   
Sbjct: 184 GEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS- 241

Query: 142 HISQDCRNLLSRIFVANPSRRI------TIKEIKSHPWF 174
            +S    ++L      +P  R+         +I+ HP+F
Sbjct: 242 -LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  125 bits (316), Expect = 7e-33
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           ++ + +RDLK  N LLD      ++I D G +       +P ++VGT  Y+APEVL +  
Sbjct: 310 NRFVVYRDLKPANILLDEHG--HVRISDLGLACD-FSKKKPHASVGTHGYMAPEVLQKGV 366

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
                AD +S G  L+ +L G  PF      K+  +     + +  ++PD    S + R+
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQ-HKTKDKHEIDRMTLTMAVELPDS--FSPELRS 423

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWF 174
           LL  +   + +RR+       +E+K  P+F
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  120 bits (304), Expect = 7e-33
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 11/145 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           SQ + H D+K  N  L   P  R K+ DFG           +   G P Y+APE+L +  
Sbjct: 175 SQGLVHLDVKPANIFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL-QGS 231

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y    ADV+S G+T+  +          E  +  R+          +      +S + R+
Sbjct: 232 YGTA-ADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPP-----EFTA--GLSSELRS 283

Query: 150 LLSRIFVANPSRRITIKEIKSHPWF 174
           +L  +   +P  R T + + + P  
Sbjct: 284 VLVMMLEPDPKLRATAEALLALPVL 308

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  125 bits (314), Expect = 9e-33
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 15/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRR 88
           S+ I +RDLKL+N +LD      +KI DFG  K ++       T  GTP YIAPE+++ +
Sbjct: 460 SKGIIYRDLKLDNVMLD--SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ 517

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y GK  D W+ GV LY ML G  PFE +++ + F+     IM      P    +S++  
Sbjct: 518 PY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHNVAYPKS--MSKEAV 570

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            +   +   +P +R+       ++IK H +F
Sbjct: 571 AICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  122 bits (309), Expect = 1e-32
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 15/148 (10%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLSRREYD 91
           + +RDLKLEN +LD      +KI DFG  K  +       T  GTP Y+APEVL   +Y 
Sbjct: 270 VVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY- 326

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL 151
           G+  D W  GV +Y M+ G  PF +Q+  K F      I+  + + P    +  + ++LL
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL----ILMEEIRFPRT--LGPEAKSLL 380

Query: 152 SRIFVANPSRRI-----TIKEIKSHPWF 174
           S +   +P +R+       KEI  H +F
Sbjct: 381 SGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  122 bits (307), Expect = 1e-32
 Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 21/159 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL--HSRPKSTVGTPAYIAPEVLSR 87
                HRD+K +N LLD      +++ DFG           R    VGTP Y++PE+L  
Sbjct: 180 RLGYVHRDIKPDNILLDRCG--HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237

Query: 88  REYD------GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPD 139
                     G   D W+ GV  Y M  G  PF       +  +T  +I+       +P 
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD----STAETYGKIVHYKEHLSLPL 293

Query: 140 Y-VHISQDCRNLLSRIFVANPSRRIT---IKEIKSHPWF 174
               + ++ R+ + R  +  P  R+      + ++HP+F
Sbjct: 294 VDEGVPEEARDFIQR-LLCPPETRLGRGGAGDFRTHPFF 331

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  123 bits (311), Expect = 2e-32
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 10/150 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            ++I +RDLK EN LLD      ++I D G +         K  VGT  Y+APEV+    
Sbjct: 304 RERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 361

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y     D W+ G  LY M+ G  PF+ ++      +    +  V  +  +    S   R+
Sbjct: 362 Y-TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--FSPQARS 418

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWF 174
           L S++   +P+ R+     + +E+K HP F
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLF 448

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  121 bits (305), Expect = 2e-32
 Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTV-GTPAYIAPEVLS 86
            + I +RDLKL+N LLD  G     +K+ D+G  K  L      ST  GTP YIAPE+L 
Sbjct: 171 ERGIIYRDLKLDNVLLDSEG----HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIMAVQYKIPDYV 141
             +Y G   D W+ GV ++ M+ G  PF      D  D          I+  Q +IP   
Sbjct: 227 GEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-- 283

Query: 142 HISQDCRNLLSRIFVANPSRRI------TIKEIKSHPWF 174
            +S    ++L      +P  R+         +I+ HP+F
Sbjct: 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  122 bits (309), Expect = 3e-32
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 15/153 (9%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLH-SRPKSTVGTPAYIAPEVLS 86
            + I +RDLK EN LLD  G     ++I D G +       ++ K   GTP ++APE+L 
Sbjct: 307 QRNIIYRDLKPENVLLDDDG----NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
             EY     D ++ GVTLY M+    PF  + +    ++   R++      PD    S  
Sbjct: 363 GEEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPA 419

Query: 147 CRNLLSRIFVANPSRRI-----TIKEIKSHPWF 174
            ++    +   +P +R+     +   +++HP F
Sbjct: 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  115 bits (290), Expect = 8e-31
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 25/151 (16%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG                     A E     
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFG--------------------FAKETT-GE 173

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV--HISQD 146
           +YD K  D+WS GV +Y++L G  PF             +RI   QY+ P+     +S++
Sbjct: 174 KYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 232

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            + L+  +    P++R+TI E  +HPW +++
Sbjct: 233 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  114 bits (287), Expect = 2e-30
 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 8/154 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
           S+++ HRD+K  N  +  +    +K+ D G  +  S   +   S VGTP Y++PE +   
Sbjct: 154 SRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYVHISQDC 147
            Y+ K +D+WS G  LY M     PF    D  N      +I    Y  +P   H S++ 
Sbjct: 212 GYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPS-DHYSEEL 267

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
           R L++     +P +R  +  +      +      
Sbjct: 268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  113 bits (286), Expect = 2e-30
 Identities = 36/172 (20%), Positives = 67/172 (38%), Gaps = 24/172 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-------------SSLLHSRPKSTVGT 76
           S+ + HRDLK  N          +K+ DFG                    ++R    VGT
Sbjct: 136 SKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193

Query: 77  PAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
             Y++PE +    Y  K  D++S G+ L+ +L   YPF  Q +     +T++ +  +++ 
Sbjct: 194 KLYMSPEQIHGNSYSHK-VDIFSLGLILFELL---YPFSTQMERV---RTLTDVRNLKFP 246

Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK-NLPRELTETAQ 187
            P +         ++  +   +P  R     I  +  F   + P +     +
Sbjct: 247 -PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTVLRQR 297

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  109 bits (274), Expect = 2e-28
 Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 23/158 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-------------VGT 76
           S+ + HRDLK  N          +K+ DFG   +       ++              VGT
Sbjct: 182 SKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239

Query: 77  PAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK 136
             Y++PE +    Y  K  D++S G+ L+ +L   Y F  Q       + I+ +  +++ 
Sbjct: 240 KLYMSPEQIHGNNYSHK-VDIFSLGLILFELL---YSFSTQM---ERVRIITDVRNLKFP 292

Query: 137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              +         ++  +   +P+ R    +I  +  F
Sbjct: 293 -LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  104 bits (262), Expect = 6e-27
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSLLHSRPKSTVGTPAYIAPEVL--S 86
             QI HRD+K +N L++ + +  LKI DFG SK  + ++   ++  GT  Y+APE++   
Sbjct: 140 DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--------- 137
            R Y    AD+WS G T+  M  G  PF +  +P           A  +K+         
Sbjct: 199 PRGYGKA-ADIWSLGCTIIEMATGKPPFYELGEP----------QAAMFKVGMFKVHPEI 247

Query: 138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
           P+   +S + +  + + F  +P +R    ++    +
Sbjct: 248 PE--SMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  103 bits (258), Expect = 5e-26
 Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 27/167 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSLLHSRPKSTVGTPAYIAPE 83
           +++I H D+K +N LL      R  +CDFG++                   GT  ++APE
Sbjct: 168 TRRILHGDVKADNVLLSSD-GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226

Query: 84  VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV-- 141
           V+  +  D K  D+WS    +  ML G +P+                  +  KI      
Sbjct: 227 VVMGKPCDAK-VDIWSSCCMMLHMLNGCHPWTQYFR-----------GPLCLKIASEPPP 274

Query: 142 ------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
                   +      +       P  R +  E++            L
Sbjct: 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGL 321

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  103 bits (258), Expect = 7e-26
 Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 28/173 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR---------LKICDFGYSKSSLLHSRP---KSTVGTP 77
             +I H D+K +N +L      +         L + D G S    L  +     +   T 
Sbjct: 190 DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETS 249

Query: 78  AYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI---------- 127
            +   E+LS + ++ +  D +    T+Y ML G Y     E  +   + +          
Sbjct: 250 GFQCVEMLSNKPWNYQ-IDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMW 308

Query: 128 SRIMAVQYKIPDYVHIS--QDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL 178
           +    V   IPD  H+      R  L ++F  + + +I       +   +  L
Sbjct: 309 NEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKI---RALRNRLIVLLL 358

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  101 bits (254), Expect = 1e-25
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 23/186 (12%)

Query: 27  SSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLS 86
           S   + + HRDLK  N LL       LKICDFG +    + +   +  G+ A++APEV  
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAG-GTVLKICDFGTAC--DIQTHMTNNKGSAAWMAPEVFE 176

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-----IPDYV 141
              Y  K  DV+S G+ L+ ++    PF++   P        RIM   +      +   +
Sbjct: 177 GSNYSEK-CDVFSWGIILWEVITRRKPFDEIGGPA------FRIMWAVHNGTRPPLIKNL 229

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQ 201
              +   +L++R +  +PS+R +++EI      + +L R      + + Y  ++   SL 
Sbjct: 230 P--KPIESLMTRCWSKDPSQRPSMEEIVKI---MTHLMRYFPGADEPLQYPCQH---SLP 281

Query: 202 SVEEIT 207
             E+  
Sbjct: 282 PGEDGR 287

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 99.7 bits (249), Expect = 5e-25
 Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 30/165 (18%)

Query: 30  SQQICHRDLKLENTLLD-----------------GSPAPRLKICDFGYSKSSLLHSRPKS 72
           S  + H D+K  N  +                   S     KI D G+       S P+ 
Sbjct: 133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR---ISSPQV 189

Query: 73  TVGTPAYIAPEVLS-RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM 131
             G   ++A EVL     +  K AD+++  +T+           + +     R+      
Sbjct: 190 EEGDSRFLANEVLQENYTHLPK-ADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLP-- 246

Query: 132 AVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
               +IP    +SQ+   LL  +   +P RR +   +  H   L 
Sbjct: 247 ----RIPQ--VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 94.3 bits (235), Expect = 4e-23
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           I HRDLK +N  + G P   +KI D G +      S  K+ +GTP ++APE+    +YD 
Sbjct: 152 IIHRDLKCDNIFITG-PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMY-EEKYDE 208

Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDPKN-FRKTISRIMAVQYKIPDYVHISQDCRNLL 151
              DV++ G+ +  M    YP+ + ++    +R+  S +               + + ++
Sbjct: 209 S-VDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDK--VAIPEVKEII 263

Query: 152 SRIFVANPSRRITIKEIKSHPWF 174
                 N   R +IK++ +H +F
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFF 286

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 94.3 bits (235), Expect = 5e-23
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 20/151 (13%)

Query: 28  SLSQQICHRDLKLENTLLDG---SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV 84
           + +  I HRDL+  N  L     +     K+ DFG S+ S         +G   ++APE 
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS--VHSVSGLLGNFQWMAPET 197

Query: 85  LSRRE--YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-----I 137
           +   E  Y  K AD +S  + LY +L G  PF++    K     I  I  ++ +     I
Sbjct: 198 IGAEEESYTEK-ADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIREEGLRPTI 251

Query: 138 PDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
           P+        RN++   +  +P +R     I
Sbjct: 252 PEDCP--PRLRNVIELCWSGDPKKRPHFSYI 280

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 89.0 bits (221), Expect = 6e-21
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 30/168 (17%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLS 86
           +Q + HRD+K ++ LL  DG    R+K+ DFG+  + S    + KS VGTP ++APEV+S
Sbjct: 159 AQGVIHRDIKSDSILLTLDG----RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS 214

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-------- 138
           R  Y  +  D+WS G+ +  M+ G  P+   + P          +    ++         
Sbjct: 215 RSLYATE-VDIWSLGIMVIEMVDGEPPYFS-DSP----------VQAMKRLRDSPPPKLK 262

Query: 139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTE 184
           +   +S   R+ L R+ V +P  R T +E+  HP FL    LP  L  
Sbjct: 263 NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP-FLLQTGLPECLVP 309

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 88.5 bits (220), Expect = 7e-21
 Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 20/162 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
           ++ I HRDLK  N  L       +KI DFG +          + +   G+  ++APEV+ 
Sbjct: 138 AKSIIHRDLKSNNIFLHEDN--TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195

Query: 87  RRE---YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
            ++   Y  + +DV++ G+ LY ++ G  P+ +     N R  I  ++      PD   +
Sbjct: 196 MQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKV 250

Query: 144 SQDC----RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
             +C    + L++         R +   I +    ++ L RE
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAE---IEELARE 289

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 88.5 bits (220), Expect = 7e-21
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 30/168 (17%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLS 86
           S Q+ HRD+K +N LL  DG     +K+ DFG+  + +   S+  + VGTP ++APEV++
Sbjct: 134 SNQVIHRDIKSDNILLGMDG----SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 189

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-------- 138
           R+ Y  K  D+WS G+    M+ G  P+ + E+P          +   Y I         
Sbjct: 190 RKAYGPK-VDIWSLGIMAIEMIEGEPPYLN-ENP----------LRALYLIATNGTPELQ 237

Query: 139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN--LPRELTE 184
           +   +S   R+ L+R    +  +R + KE+  H  FLK       LT 
Sbjct: 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ-FLKIAKPLSSLTP 284

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 89.5 bits (222), Expect = 8e-21
 Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 42/183 (22%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYD 91
           +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y 
Sbjct: 152 KIMHRDVKPSNILVNSRG--EIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYS 208

Query: 92  GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY----------- 140
            + +D+WS G++L  M VG YP    +  +       ++     + P             
Sbjct: 209 VQ-SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267

Query: 141 ---VHISQDCRNLLSRI-------------------FVA-----NPSRRITIKEIKSHPW 173
                       LL  I                   FV      NP+ R  +K++  H +
Sbjct: 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327

Query: 174 FLK 176
             +
Sbjct: 328 IKR 330

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 26/157 (16%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEV----LS 86
            + HRD+K  N L++     ++K+CDFG S   L+    K    G   Y+APE     L+
Sbjct: 130 SVIHRDVKPSNVLINALG--QVKMCDFGISGY-LVDDVAKDIDAGCKPYMAPERINPELN 186

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY------ 140
           ++ Y  K +D+WS G+T+  + +  +P++    P               ++ +       
Sbjct: 187 QKGYSVK-SDIWSLGITMIELAILRFPYDSWGTP----------FQQLKQVVEEPSPQLP 235

Query: 141 -VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
               S +  +  S+    N   R T  E+  HP+F  
Sbjct: 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 88.2 bits (219), Expect = 1e-20
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRRE- 89
            + HRD+K  N LLD     ++K+CDFG S   L+  + K    G  AY+APE +   + 
Sbjct: 145 GVIHRDVKPSNILLDERG--QIKLCDFGISGR-LVDDKAKDRSAGCAAYMAPERIDPPDP 201

Query: 90  ----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP---DYVH 142
               YD + ADVWS G++L  +  G +P+   ++ K   + ++++  +Q + P    ++ 
Sbjct: 202 TKPDYDIR-ADVWSLGISLVELATGQFPY---KNCKTDFEVLTKV--LQEEPPLLPGHMG 255

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
            S D ++ +      +  +R    ++  H +  +    E
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE 294

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 22/148 (14%)

Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           +L   I    L   + ++D       +I       S     +    +  PA++APE L +
Sbjct: 129 TLEPLIPRHALNSRSVMIDEDM--TARISMADVKFSF----QSPGRMYAPAWVAPEALQK 182

Query: 88  REYDG--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-----IPDY 140
           +  D   + AD+WS  V L+ ++    PF D          +   M V  +     IP  
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADL-------SNMEIGMKVALEGLRPTIPP- 234

Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEI 168
             IS     L+      +P++R     I
Sbjct: 235 -GISPHVSKLMKICMNEDPAKRPKFDMI 261

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 87.4 bits (217), Expect = 2e-20
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 21/155 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
           S++  HRD+K  N LL       +K+ DFG +   +    +  + VGTP ++APEV+ + 
Sbjct: 137 SEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 194

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYV------H 142
            YD K AD+WS G+T   +  G  P  +   P          M V + IP         +
Sbjct: 195 AYDSK-ADIWSLGITAIELARGEPPHSE-LHP----------MKVLFLIPKNNPPTLEGN 242

Query: 143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 177
            S+  +  +       PS R T KE+  H + L+N
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 86.6 bits (215), Expect = 4e-20
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 23/167 (13%)

Query: 28  SLSQQICHRDLKLENTLLDGSPAPRLKICDFGYS--KSSLLHSRPKSTVGTPAYIAPEVL 85
           + +  I HR+LK  N L+D      +K+CDFG S  K+S   S  KS  GTP ++APEVL
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKASTFLSS-KSAAGTPEWMAPEVL 211

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-----IPDY 140
                + K +DV+S GV L+ +     P+ +             + AV +K     IP  
Sbjct: 212 RDEPSNEK-SDVYSFGVILWELATLQQPWGNLNP-------AQVVAAVGFKCKRLEIPRN 263

Query: 141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQ 187
           ++       ++   +   P +R +   I      L+ L +       
Sbjct: 264 LN--PQVAAIIEGCWTNEPWKRPSFATIMDL---LRPLIKSAVPPPN 305

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 86.3 bits (214), Expect = 7e-20
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 35/183 (19%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPK--STVGTPAYIAPEVL 85
             +  HRD+K  N LL  +G      K+ DFG +   L  +  K  + +GTP ++APEV+
Sbjct: 143 FMRKIHRDIKAGNILLNTEG----HAKLADFGVA-GQLTDTMAKRNTVIGTPFWMAPEVI 197

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP------- 138
               Y+   AD+WS G+T   M  G  P+ D   P          M   + IP       
Sbjct: 198 QEIGYNCV-ADIWSLGITAIEMAEGKPPYAD-IHP----------MRAIFMIPTNPPPTF 245

Query: 139 -DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP-----RELTETAQAIYYR 192
                 S +  + + +  V +P +R T  ++  HP F+++       R+L   A  +  +
Sbjct: 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHP-FVRSAKGVSILRDLINEAMDVKLK 304

Query: 193 KEN 195
           ++ 
Sbjct: 305 RQE 307

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 85.8 bits (213), Expect = 1e-19
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVL----S 86
           +I HRD+K  N LLD S    +K+CDFG S   L+ S  K+   G   Y+APE +    S
Sbjct: 146 KIIHRDIKPSNILLDRSG--NIKLCDFGISGQ-LVDSIAKTRDAGCRPYMAPERIDPSAS 202

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           R+ YD + +DVWS G+TLY +  G +P+       +    + +    Q    +    S  
Sbjct: 203 RQGYDVR-SDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPS 261

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
             N ++     + S+R   KE+  HP+ L 
Sbjct: 262 FINFVNLCLTKDESKRPKYKELLKHPFILM 291

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 22/150 (14%)

Query: 33  ICHRDLKLENTLLDGSPAPR------LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLS 86
           I HRDLK  N L+             LKI DFG ++     +   S  G  A++APEV+ 
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE-WHRTTKMSAAGAYAWMAPEVIR 187

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-----IPDYV 141
              +    +DVWS GV L+ +L G  PF   +        ++    V        IP   
Sbjct: 188 ASMFSKG-SDVWSYGVLLWELLTGEVPFRGID-------GLAVAYGVAMNKLALPIPSTC 239

Query: 142 HISQDCRNLLSRIFVANPSRRITIKEIKSH 171
              +    L+   +  +P  R +   I   
Sbjct: 240 P--EPFAKLMEDCWNPDPHSRPSFTNILDQ 267

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 82.4 bits (204), Expect = 2e-18
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 32/167 (19%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLS 86
             ++ HRD+K +N LL  +      +K+ DFG S +      R  + +GTP ++APEV++
Sbjct: 147 QHKVIHRDIKGQNVLLTENA----EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202

Query: 87  RRE-----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--- 138
             E     YD K +D+WS G+T   M  GA P  D   P          M   + IP   
Sbjct: 203 CDENPDATYDFK-SDLWSLGITAIEMAEGAPPLCD-MHP----------MRALFLIPRNP 250

Query: 139 ----DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
                    S+  ++ +    V N S+R   +++  HP F+++ P E
Sbjct: 251 APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP-FIRDQPNE 296

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 81.2 bits (201), Expect = 4e-18
 Identities = 40/172 (23%), Positives = 60/172 (34%), Gaps = 44/172 (25%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTPAYIAPEVL-- 85
           I HRDLK +N L+  +   +  I D G +      ++ L       VGT  Y+APEVL  
Sbjct: 134 IAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191

Query: 86  ----SRREYDGKLADVWSCGVTLYVMLVGAY----------PFEDQ--EDP--------- 120
                  +   +  D+W+ G+ L+ +               PF D    DP         
Sbjct: 192 TIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250

Query: 121 --KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS 170
                R  I         +     + ++C          NPS R+T   IK 
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWY-------QNPSARLTALRIKK 295

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 80.9 bits (200), Expect = 6e-18
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 40/174 (22%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSLLHSRPKSTVGTPAYIAPE 83
           ++ I H+DLK +N   D     ++ I DFG         +     + +   G   ++APE
Sbjct: 148 AKGILHKDLKSKNVFYDNG---KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204

Query: 84  VLSRRE---------YDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-------KNFRKTI 127
           ++ +           +    +DV++ G   Y +    +PF+ Q             +  +
Sbjct: 205 IIRQLSPDTEEDKLPFSKH-SDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL 263

Query: 128 SRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
           S+I            + ++  ++L   +      R T  ++      L+ LP+ 
Sbjct: 264 SQI-----------GMGKEISDILLFCWAFEQEERPTFTKLMDM---LEKLPKR 303

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 80.1 bits (198), Expect = 8e-18
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 25/172 (14%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS------KSSLLHSRPKSTVGTPAYIA 81
                HRD+K  N LL  DGS    ++I DFG S           +   K+ VGTP ++A
Sbjct: 139 KNGQIHRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194

Query: 82  PEVLSR-REYDGKLADVWSCGVTLYVMLVGAYPFEDQED-------PKNFRKTISRIMAV 133
           PEV+ + R YD K AD+WS G+T   +  GA P+             +N   ++   +  
Sbjct: 195 PEVMEQVRGYDFK-ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253

Query: 134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE-LTE 184
           +  +  Y    +  R ++S     +P +R T  E+  H +F K   +E L E
Sbjct: 254 KEMLKKY---GKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 36/179 (20%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYS-KSSLLHSRPKSTVGTPAYIAPEVLS 86
           S++I HRDLK  N L+  +G     +++ DFG S K+     +  S +GTP ++APEV+ 
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM 190

Query: 87  RRE-----YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--- 138
                   YD K AD+WS G+TL  M     P  +  +P          M V  KI    
Sbjct: 191 CETMKDTPYDYK-ADIWSLGITLIEMAQIEPPHHE-LNP----------MRVLLKIAKSD 238

Query: 139 -----DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP----RELTETAQA 188
                     S + R+ L      NP  R +  ++  HP+          REL   A+A
Sbjct: 239 PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKA 297

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 78.6 bits (194), Expect = 5e-17
 Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 49/196 (25%)

Query: 32  QICHRDLKLENTLLDGSPAPR----LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
            I H D+K EN L++   +P     +KI D G   +        +++ T  Y +PEVL  
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDEHYTNSIQTREYRSPEVLLG 209

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKT--ISRIMAV------------ 133
             +    AD+WS    ++ ++ G + FE  E     +    I++I+ +            
Sbjct: 210 APWGCG-ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 268

Query: 134 ------------------------QYKIPDYVHISQDCR----NLLSRIFVANPSRRITI 165
                                   +  + +    S+D      + LS +   +P +R   
Sbjct: 269 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328

Query: 166 KEIKSHPWFLKNLPRE 181
             + +HPW    L  E
Sbjct: 329 GGLVNHPWLKDTLGME 344

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 79.0 bits (195), Expect = 6e-17
 Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           S  ICHRD+K +N LLD   A  LK+CDFG +K   L     +   + +  Y APE+   
Sbjct: 174 SFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQ--LVRGEPNVSYICSRYYRAPELIFG 230

Query: 87  RREYDGKLADVWSCGVTLYVMLVGA--YPFEDQED-----------PKNFRKTISRI--M 131
             +Y   + DVWS G  L  +L+G   +P +   D           P   R+ I  +   
Sbjct: 231 ATDYTSSI-DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT--REQIREMNPN 287

Query: 132 AVQYKIPDYV----------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++K P                 +   L SR+    P+ R+T  E  +H +F
Sbjct: 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 34/173 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           S  ICHRD+K +N LLD      LK+ DFG +K   L +   +   + +  Y APE+   
Sbjct: 159 SIGICHRDIKPQNLLLDPPSG-VLKLIDFGSAKI--LIAGEPNVSYICSRYYRAPELIFG 215

Query: 87  RREYDGKLADVWSCGVTLYVMLVGA--YPFEDQED-----------PKNFRKTISRIMA- 132
              Y   + D+WS G  +  ++ G   +P E   D           P   R+ I  +   
Sbjct: 216 ATNYTTNI-DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS--REQIKTMNPN 272

Query: 133 -VQYKIPDYV----------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            +++K P                 D  +L+SR+    PS R+T  E   HP+F
Sbjct: 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 47/193 (24%)

Query: 23  DIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTP 77
           +I  +     I HRDLK +N L+  +      I D G +      +  +   P   VGT 
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215

Query: 78  AYIAPEVL------SRREYDGKLADVWSCGVTLYVMLVG----------AYPFEDQ--ED 119
            Y+APEVL         E   + AD+++ G+  + +               P+ D    D
Sbjct: 216 RYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274

Query: 120 P-----------KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
           P           +  R  I         +     I ++C       + AN + R+T   I
Sbjct: 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC-------WYANGAARLTALRI 327

Query: 169 KSHPWFLKNLPRE 181
           K     L  L ++
Sbjct: 328 KKT---LSQLSQQ 337

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 44/182 (24%)

Query: 23  DIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTP 77
           +IF +     I HRDLK +N L+  +      I D G +      ++ +   P + VGT 
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210

Query: 78  AYIAPEVL------SRREYDGKLADVWSCGVTLYVMLVG----------AYPFED--QED 119
            Y+ PEVL      +  +     AD++S G+ L+ +               P+ D    D
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIM-ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269

Query: 120 P-----------KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEI 168
           P           K  R +     +    +     +  +C       +  NP+ R+T   +
Sbjct: 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTEC-------WAHNPASRLTALRV 322

Query: 169 KS 170
           K 
Sbjct: 323 KK 324

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 75.5 bits (186), Expect = 5e-16
 Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 35/182 (19%)

Query: 30  SQQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLS- 86
           S  + HRD+K  N LL   G     +K+ DFG   +S++     S VGTP ++APEV+  
Sbjct: 172 SHNMIHRDVKAGNILLSEPG----LVKLGDFGS--ASIMAPA-NSFVGTPYWMAPEVILA 224

Query: 87  --RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP------ 138
               +YDGK  DVWS G+T   +     P  +  +           M+  Y I       
Sbjct: 225 MDEGQYDGK-VDVWSLGITCIELAERKPPLFN-MNA----------MSALYHIAQNESPA 272

Query: 139 -DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP----RELTETAQAIYYRK 193
               H S+  RN +       P  R T + +  H + L+  P     +L +  +      
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVREL 332

Query: 194 EN 195
           +N
Sbjct: 333 DN 334

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 75.8 bits (187), Expect = 5e-16
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 31/173 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STVGTPAYIAPEV-LSR 87
           S  +CHRD+K  N L++ +    LK+CDFG +K  L  S P  + + +  Y APE+    
Sbjct: 149 SVNVCHRDIKPHNVLVNEADG-TLKLCDFGSAK-KLSPSEPNVAYICSRYYRAPELIFGN 206

Query: 88  REYDGKLADVWSCGVTLYVMLVGA--YPFEDQED---------------------PKNFR 124
           + Y   + D+WS G     M++G   +  ++                        P +  
Sbjct: 207 QHYTTAV-DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTD 265

Query: 125 KTISRIMAVQYK--IPDYV-HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             +     + +     D+    +++  +LLS +    P  R+   E   HP+F
Sbjct: 266 VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 75.2 bits (185), Expect = 8e-16
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 34/173 (19%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           S  ICHRD+K +N L++      LK+CDFG +K   L     S   + +  Y APE+ L 
Sbjct: 159 SLGICHRDIKPQNLLVNSKDN-TLKLCDFGSAKK--LIPSEPSVAYICSRFYRAPELMLG 215

Query: 87  RREYDGKLADVWSCGVTLYVMLVGA--YPFEDQED-----------PKNFRKTISRI--M 131
             EY   + D+WS G     +++G   +  E   D           P   ++ + R+   
Sbjct: 216 ATEYTPSI-DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPT--KEQMIRMNPH 272

Query: 132 AVQYKIPDYVHIS----------QDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             + + P                    +LL +I    P  RI   E  +HP+F
Sbjct: 273 YTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 74.6 bits (184), Expect = 9e-16
 Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 39/180 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVL-S 86
           S  I HRD+K  N ++D     +L++ D+G ++    H   +    V +  +  PE+L  
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFY--HPGQEYNVRVASRYFKGPELLVD 204

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPF------EDQ----------EDPKNFRKTISRI 130
            + YD  L D+WS G  L  M+    PF       DQ          ED  ++    +  
Sbjct: 205 YQMYDYSL-DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263

Query: 131 MAVQYK--IPDY--------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           +  ++   +  +                +S +  + L ++   +   R+T +E   HP+F
Sbjct: 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 75.3 bits (185), Expect = 1e-15
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 8/88 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + + DLK EN +L      +LK+ D G        +      GTP + APE++    
Sbjct: 200 SIGLVYNDLKPENIMLTEE---QLKLIDLGAVSR---INSFGYLYGTPGFQAPEIVRTGP 253

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQ 117
                 D+++ G TL  + +       +
Sbjct: 254 TVA--TDIYTVGRTLAALTLDLPTRNGR 279

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 72.9 bits (180), Expect = 2e-15
 Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 48/186 (25%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
           S+ + HRDLK +N L++ +    LK+ +FG +++  +  R  S  V T  Y  P+VL   
Sbjct: 119 SRNVLHRDLKPQNLLINRN--GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF------EDQEDPKNFRKTISRIMAV-------- 133
           + Y   + D+WS G     +     P       +DQ         + RI  +        
Sbjct: 177 KLYSTSI-DMWSAGCIFAELANAGRPLFPGNDVDDQ---------LKRIFRLLGTPTEEQ 226

Query: 134 ---QYKIPDYV----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                K+PDY                  ++   R+LL  +   NP +RI+ +E   HP+F
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

Query: 175 LKNLPR 180
             +   
Sbjct: 287 -SDFCP 291

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 44/175 (25%), Positives = 65/175 (37%), Gaps = 33/175 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----VGTPAYIAPEV- 84
           S  + HRDLK  N  ++ +    LKI DFG ++    H   K      + T  Y +P + 
Sbjct: 138 SANVLHRDLKPANLFIN-TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFE------------------DQED----PKN 122
           LS   Y  K  D+W+ G     ML G   F                    +ED       
Sbjct: 197 LSPNNYT-KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSV 255

Query: 123 FRKTISRIMAVQYKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
               I      +   P       IS++  + L +I   +P  R+T +E  SHP+ 
Sbjct: 256 IPVYIRN-DMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 72.3 bits (178), Expect = 6e-15
 Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR---LKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL 85
           S++  HRDLK +N LL  S A     LKI DFG +++  +  R  +  + T  Y  PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209

Query: 86  -SRREYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIM-------- 131
              R Y   + D+WS       ML+    F      DQ         I  ++        
Sbjct: 210 LGSRHYSTSV-DIWSIACIWAEMLMKTPLFPGDSEIDQLF------KIFEVLGLPDDTTW 262

Query: 132 -AVQYKIPDYV-----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
             V   +PD+                   +  +  +LL+ +   +P +RI+ K    HP+
Sbjct: 263 PGVT-ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321

Query: 174 FLKNLP 179
           F  +  
Sbjct: 322 F-SHND 326

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 72.8 bits (179), Expect = 6e-15
 Identities = 41/213 (19%), Positives = 63/213 (29%), Gaps = 56/213 (26%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
             +I H DLK EN LL       +K+ DFG   S   H R  + + +  Y APEV+    
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTYIQSRFYRAPEVILGAR 275

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPF----------------------------------- 114
           Y   + D+WS G  L  +L G                                       
Sbjct: 276 YGMPI-DMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334

Query: 115 ----------EDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR--------NLLSRIFV 156
                         D                  P+        +        + L +   
Sbjct: 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394

Query: 157 ANPSRRITIKEIKSHPWFLKNLPRELTETAQAI 189
            +P+ R+T  +   HPW  + LP+  T    ++
Sbjct: 395 WDPAVRMTPGQALRHPWLRRRLPKPPTGEKTSV 427

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 72.2 bits (178), Expect = 6e-15
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 47/200 (23%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
                HRD+K EN L+       +K+CDFG+++     S      V T  Y +PE+L   
Sbjct: 120 KHNCIHRDVKPENILITKH--SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIM----------- 131
            +Y G   DVW+ G     +L G   +      DQ         I + +           
Sbjct: 178 TQY-GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ------LYLIRKTLGDLIPRHQQVF 230

Query: 132 -----AVQYKIPDYV----------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF-- 174
                    KIPD            +IS     LL      +P+ R+T +++  HP+F  
Sbjct: 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290

Query: 175 ---LKNLPRELTETAQAIYY 191
              +++L +E  + A+ +Y+
Sbjct: 291 IREIEDLAKEHDKPAENLYF 310

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 72.3 bits (178), Expect = 7e-15
 Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 30/172 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV-LSRR 88
              + HRDL   N LL  +    + ICDF  ++     +     V    Y APE+ +  +
Sbjct: 152 EAGVVHRDLHPGNILLADNN--DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFK 209

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFE------------------DQED-----PKNFRK 125
            +  KL D+WS G  +  M      F                     ED       + R 
Sbjct: 210 GFT-KLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268

Query: 126 TISRIMAVQYKIP---DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            +   ++                   +L++++   NP RRI+ ++   HP+F
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 72.3 bits (178), Expect = 7e-15
 Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 35/173 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           S  + HRDLK  N  ++      LKI DFG ++ +      + T  V T  Y APEV LS
Sbjct: 144 SAGVVHRDLKPGNLAVNEDC--ELKILDFGLARHA----DAEMTGYVVTRWYRAPEVILS 197

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFE-----DQED---------PKNFRKTISRIMA 132
              Y+ +  D+WS G  +  ML G   F+     DQ              F + ++   A
Sbjct: 198 WMHYN-QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256

Query: 133 VQY--KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             Y   +P          +   S    +LL ++   +  +R+T  +  +HP+F
Sbjct: 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 71.8 bits (177), Expect = 8e-15
 Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 44/186 (23%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
             +I HRDLK +N L++      LK+ DFG +++  +  R  +  V T  Y AP+VL   
Sbjct: 137 QHRILHRDLKPQNLLINSD--GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIM---------AV 133
           ++Y   + D+WS G     M+ G   F     +DQ         I  I+          V
Sbjct: 195 KKYSTSV-DIWSIGCIFAEMITGKPLFPGVTDDDQLP------KIFSILGTPNPREWPQV 247

Query: 134 QYKIPDYV-----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
           Q ++P +                     Q+  +LLS +   +P++RI+ ++  +HP+F K
Sbjct: 248 Q-ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF-K 305

Query: 177 NLPREL 182
           +L  ++
Sbjct: 306 DLDPQI 311

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 72.2 bits (177), Expect = 9e-15
 Identities = 34/205 (16%), Positives = 64/205 (31%), Gaps = 54/205 (26%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYS--------KSSLLHSRPKSTVGTPAYIA 81
                HR +K  + L+       + +     +        +  ++H  PK +V    +++
Sbjct: 146 HMGYVHRSVKASHILISVDGK--VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203

Query: 82  PEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFED-----------QEDP-------- 120
           PEVL +  + YD K +D++S G+T   +  G  PF+D                       
Sbjct: 204 PEVLQQNLQGYDAK-SDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262

Query: 121 ---------------------KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANP 159
                                     T           P +   S    + + +    NP
Sbjct: 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNP 322

Query: 160 SRRITIKEIKSHPWFLKNLPRELTE 184
             R +   + +H  F K + R  +E
Sbjct: 323 DARPSASTLLNHS-FFKQIKRRASE 346

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
           +    HRD+K EN L+  S      + DFG     +   L  ++  +TVGT  Y+APE  
Sbjct: 152 AAGATHRDVKPENILV--SADDFAYLVDFGIASATTDEKL--TQLGNTVGTLYYMAPERF 207

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFE 115
           S      + AD+++    LY  L G+ P++
Sbjct: 208 SESHATYR-ADIYALTCVLYECLTGSPPYQ 236

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 32/177 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---------------SSLLHSRPKSTV 74
           S  I HRDL   N L+  +    + + DFG ++                     +  + V
Sbjct: 126 SMNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183

Query: 75  GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ 134
           G P ++APE+++ R YD K  DV+S G+ L  ++       D   P+           + 
Sbjct: 184 GNPYWMAPEMINGRSYDEK-VDVFSFGIVLCEIIGRVNADPD-YLPRT------MDFGLN 235

Query: 135 YKIPDYVHISQDC----RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQ 187
            +     +   +C      +  R    +P +R +  +++    +L+ L   L     
Sbjct: 236 VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLE---HWLETLRMHLAGHLP 289

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 44/193 (22%), Positives = 71/193 (36%), Gaps = 43/193 (22%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSR- 87
           S  I HRD+K EN L+  S    +K+CDFG++++           V T  Y APE+L   
Sbjct: 142 SHNIIHRDIKPENILVSQS--GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIM----------- 131
            +Y GK  DVW+ G  +  M +G   F      DQ         I   +           
Sbjct: 200 VKY-GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ------LYHIMMCLGNLIPRHQELF 252

Query: 132 -----AVQYKIPDYVH----------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
                    ++P+             +S+   +L  +    +P +R    E+  H +F  
Sbjct: 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312

Query: 177 -NLPRELTETAQA 188
                  ++  Q 
Sbjct: 313 DGFAERFSQELQL 325

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 70.2 bits (173), Expect = 3e-14
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 42/177 (23%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
            +++ HRDLK +N L++      LKI DFG +++  +  R  +  + T  Y AP+VL   
Sbjct: 118 DRRVLHRDLKPQNLLINRE--GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIM---------AV 133
           ++Y   + D+WS G     M+ G   F      DQ         I RI+          V
Sbjct: 176 KKYSTTI-DIWSVGCIFAEMVNGTPLFPGVSEADQLM------RIFRILGTPNSKNWPNV 228

Query: 134 QYKIPDYV----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++P Y                  + +   +LLS++   +P++RIT K+   H +F
Sbjct: 229 T-ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 44/186 (23%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
            Q++ HRDLK +N L++      LK+ DFG +++  + ++     V T  Y  P++L   
Sbjct: 118 RQKVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIM---------AV 133
            +Y  ++ D+W  G   Y M  G   F     E+Q         I RI+          +
Sbjct: 176 TDYSTQI-DMWGVGCIFYEMATGRPLFPGSTVEEQLH------FIFRILGTPTEETWPGI 228

Query: 134 QYKIPDYV-----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
                ++                   +  D  +LL+++       RI+ ++   HP+F  
Sbjct: 229 L-SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF-L 286

Query: 177 NLPREL 182
           +L   +
Sbjct: 287 SLGERI 292

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 42/169 (24%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS--- 86
           I HRD+K +N LL  +      I DFG +    +          VGT  Y+APEVL    
Sbjct: 152 ISHRDIKSKNVLLKNNLTA--CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209

Query: 87  --RREYDGKLADVWSCGVTL--------------------YVMLVGAYP-FEDQED---P 120
             +R+   +  D+++ G+ L                    +   +G +P  ED ++    
Sbjct: 210 NFQRDAFLR-IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH 268

Query: 121 KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIK 169
           K  R  +         +       ++C +        +   R++   + 
Sbjct: 269 KKKRPVLRDYWQKHAGMAMLCETIEECWD-------HDAEARLSAGCVG 310

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 35/173 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           S  I HRDLK  N  ++      LKI DFG ++     +  + T  V T  Y APE+ L+
Sbjct: 150 SADIIHRDLKPSNLAVNEDC--ELKILDFGLARH----TADEMTGYVATRWYRAPEIMLN 203

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFE-----DQED---------PKNFRKTISRIMA 132
              Y+ +  D+WS G  +  +L G   F      DQ                K IS   A
Sbjct: 204 WMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262

Query: 133 VQY--KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             Y   +           ++  +    +LL ++ V +  +RIT  +  +H +F
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 35/173 (20%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEV-LS 86
           +  I HRDLK  N  ++      LKI DFG ++     +  + T  V T  Y APEV L+
Sbjct: 146 AAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQ----ADSEMTGYVVTRWYRAPEVILN 199

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFE-----DQED---------PKNFRKTISRIMA 132
              Y  +  D+WS G  +  M+ G   F+     DQ           P  F + +    A
Sbjct: 200 WMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258

Query: 133 VQY--KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             Y   +P+           + S    NLL ++ V +  +R+T  E  +HP+F
Sbjct: 259 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 68.8 bits (169), Expect = 8e-14
 Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 34/181 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL-SR 87
             +I HRDLK +N L++     +LK+ DFG +++  +     S+ V T  Y AP+VL   
Sbjct: 126 ENKILHRDLKPQNLLINKR--GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF-----EDQ------------ED--P-------- 120
           R Y   + D+WSCG  L  M+ G   F     E+Q            E   P        
Sbjct: 184 RTYSTSI-DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242

Query: 121 -KNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
             N ++   R +    +      +  +  + L  +   NP  R++ K+   HPWF     
Sbjct: 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF-AEYY 301

Query: 180 R 180
            
Sbjct: 302 H 302

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 40/181 (22%), Positives = 60/181 (33%), Gaps = 44/181 (24%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           +  I HRDLK EN L+       +K+ DFG ++           V T  Y APEVL +  
Sbjct: 138 ANCIVHRDLKPENILVTSG--GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST 195

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPF------EDQEDPKNFRKTISRIMAV---------- 133
           Y   + D+WS G     M     P        DQ         + +I  +          
Sbjct: 196 YATPV-DMWSVGCIFAEMFRRK-PLFCGNSEADQ---------LGKIFDLIGLPPEDDWP 244

Query: 134 ------QYKIPDYV---------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL 178
                 +   P             + +    LL  +   NP +RI+      H +  K+ 
Sbjct: 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304

Query: 179 P 179
            
Sbjct: 305 G 305

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 45/181 (24%), Positives = 67/181 (37%), Gaps = 39/181 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 145 SAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFE------------------DQED------------ 119
           Y  +  D+WS G  +  M+ G   F                     E             
Sbjct: 203 YK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 261

Query: 120 ---PKNFRKTISRIMAVQYKIPDYVHISQ---DCRNLLSRIFVANPSRRITIKEIKSHPW 173
              PK    +  ++        D  H        R+LLS++ V + S+RI++ E   HP+
Sbjct: 262 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321

Query: 174 F 174
            
Sbjct: 322 I 322

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 33/175 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST----VGTPAYIAPEV- 84
           S  + HRDLK  N LL+ +    LKICDFG ++ +             V T  Y APE+ 
Sbjct: 146 SANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFE-----DQED---------PKNFRKTISRI 130
           L+ + Y  K  D+WS G  L  ML     F      DQ +          +     I  +
Sbjct: 204 LNSKGYT-KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262

Query: 131 MAVQY--KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            A  Y   +P          + +      +LL ++   NP +RI +++  +HP+ 
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 67.6 bits (166), Expect = 3e-13
 Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 43/181 (23%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  
Sbjct: 138 SHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPF-----EDQEDPKNFRKTISRIMAV----------- 133
           Y   + D+WS G     M      F      DQ         + +I+ V           
Sbjct: 196 YATPV-DLWSVGCIFAEMFRRKPLFRGSSDVDQ---------LGKILDVIGLPGEEDWPR 245

Query: 134 -----QYKIPDYV---------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
                +                 I +  ++LL +    NP++RI+     SHP+F ++L 
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF-QDLE 304

Query: 180 R 180
           R
Sbjct: 305 R 305

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 67.6 bits (166), Expect = 3e-13
 Identities = 54/187 (28%), Positives = 73/187 (39%), Gaps = 52/187 (27%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVL- 85
              I HRDLK  N LLD  G     LK+ DFG +KS    +R  +  V T  Y APE+L 
Sbjct: 130 QHWILHRDLKPNNLLLDENG----VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF 185

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPF------EDQEDPKNFRKTISRIMAV------ 133
             R Y   + D+W+ G  L  +L+   PF       DQ         ++RI         
Sbjct: 186 GARMYGVGV-DMWAVGCILAELLLRV-PFLPGDSDLDQ---------LTRIFETLGTPTE 234

Query: 134 -----QYKIPDYV---------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                   +PDYV                   D  +L+  +F+ NP  RIT  +     +
Sbjct: 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294

Query: 174 FLKNLPR 180
           F  N P 
Sbjct: 295 F-SNRPG 300

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 67.9 bits (166), Expect = 3e-13
 Identities = 42/199 (21%), Positives = 67/199 (33%), Gaps = 50/199 (25%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR--LKICDFGYSKSSLLHSRPKST----VGTPAYIAPE 83
           +  + HRDLK  N L+ G    R  +KI D G+++      +P +     V T  Y APE
Sbjct: 146 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205

Query: 84  VL-SRREYDGKLADVWSCGVTLYVML---------------------------------- 108
           +L   R Y  K  D+W+ G     +L                                  
Sbjct: 206 LLLGARHY-TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 264

Query: 109 -------VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSR 161
                  +   P          R T +    ++Y     V       +LL ++   +P +
Sbjct: 265 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 324

Query: 162 RITIKEIKSHPWFLKNLPR 180
           RIT ++    P+F    P 
Sbjct: 325 RITSEQAMQDPYF-LEDPL 342

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSR 87
             +I HRD+K +N L+D      LKI DFG +K  S    ++    +GT  Y +PE    
Sbjct: 129 DMRIVHRDIKPQNILID--SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFE 115
              D    D++S G+ LY MLVG  PF 
Sbjct: 187 EATDEC-TDIYSIGIVLYEMLVGEPPFN 213

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 67.2 bits (164), Expect = 4e-13
 Identities = 45/215 (20%), Positives = 73/215 (33%), Gaps = 50/215 (23%)

Query: 32  QICHRDLKLENTLLDGSPAPRLKICDFGYSK---------SSLLHSRPKSTVGTPAYIAP 82
            I HRDL   N L+         I DFG S               +   S VGT  Y+AP
Sbjct: 140 AISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197

Query: 83  EVLSRR------EYDGKLADVWSCGVTLYVML---VGAYPFEDQEDPKNFRKTISRIMAV 133
           EVL         E   K  D+++ G+  + +       +P E   +              
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE-------------- 243

Query: 134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKE-IKSHPWFLKNLPRELTET-----AQ 187
            Y++     +         ++ V+   +R    E  K +   +++L +E  E      A+
Sbjct: 244 -YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSL-KETIEDCWDQDAE 301

Query: 188 AIYYRKENPTFS--LQSVEEITKIVEEAKVPPPVS 220
           A   R    T     + + E+  I E  K   P +
Sbjct: 302 A---R---LTAQXAEERMAELMMIWERNKSVSPTA 330

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 45/213 (21%), Positives = 65/213 (30%), Gaps = 61/213 (28%)

Query: 25  FFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV 84
           F ++    I H DLK EN LL       +KI DFG   S  L  R    + +  Y +PEV
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQYIQSRFYRSPEV 229

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVG---------------------------------- 110
           L    YD  + D+WS G  L  M  G                                  
Sbjct: 230 LLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA 288

Query: 111 ----------AYPFEDQEDPKN-----FRKTISRIMAVQYKIP---DYVHISQDCRN--- 149
                      +  +  +D K        + +  I+ V+   P             +   
Sbjct: 289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 348

Query: 150 ---LLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
              L+ R+   +P  RI       H +F K   
Sbjct: 349 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 65.7 bits (161), Expect = 9e-13
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKSTVGTPAYIAPEVL 85
              I HRD+K  N ++  S    +K+ DFG     + S    ++  + +GT  Y++PE  
Sbjct: 134 QNGIIHRDVKPANIMI--SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFE 115
                D + +DV+S G  LY +L G  PF 
Sbjct: 192 RGDSVDAR-SDVYSLGCVLYEVLTGEPPFT 220

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 41/183 (22%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRPKST-------VGTPA 78
              + HRDLK  N L++ +    LK+CDFG      +S+  +S P          V T  
Sbjct: 130 GSNVIHRDLKPSNLLINSNC--DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187

Query: 79  YIAPEV-LSRREYDGKLADVWSCGVTLYVMLVGAYPFE-----DQED----------PKN 122
           Y APEV L+  +Y  +  DVWSCG  L  + +    F       Q              N
Sbjct: 188 YRAPEVMLTSAKYS-RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246

Query: 123 FRKTISRIMAVQY--KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSH 171
             + I    A +Y   +P          +  ++    +LL R+ V +P++RIT KE   H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306

Query: 172 PWF 174
           P+ 
Sbjct: 307 PYL 309

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 64.5 bits (157), Expect = 4e-12
 Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 41/182 (22%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 182 SAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFE------------------DQED------------ 119
           Y  +  D+WS G  +  M+     F                     E             
Sbjct: 240 YK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 298

Query: 120 -------PKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHP 172
                     F K     +       +    +   R+LLS++ V +P++RI++ +   HP
Sbjct: 299 ENRPKYAGLTFPKLFPDSLFPADSEHNK-LKASQARDLLSKMLVIDPAKRISVDDALQHP 357

Query: 173 WF 174
           + 
Sbjct: 358 YI 359

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 43/206 (20%), Positives = 66/206 (32%), Gaps = 60/206 (29%)

Query: 32  QICHRDLKLENTLLDGSPA-----------------PRLKICDFGYSKSSLLHSRPKST- 73
           Q+ H DLK EN L   S                     +++ DFG   S+       +T 
Sbjct: 143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATFDHEHHTTI 199

Query: 74  VGTPAYIAPEVLSRREYDGKLADVWSCGVTLY---------------------VMLVGAY 112
           V T  Y  PEV+    +     DVWS G  L+                       ++G  
Sbjct: 200 VATRHYRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258

Query: 113 P------------FEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD-----CRNLLSRIF 155
           P            F       +   +  R +    K      +          +L+ R+ 
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML 318

Query: 156 VANPSRRITIKEIKSHPWFLKNLPRE 181
             +P++RIT+ E   HP+F    P E
Sbjct: 319 EFDPAQRITLAEALLHPFFAGLTPEE 344

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 39/179 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSLLHSRP-KSTVGTPAYIAPEV 84
             +I HRD+K  N L+       LK+ DFG    +S +         + V T  Y  PE+
Sbjct: 142 RNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL 199

Query: 85  L-SRREYDGKLADVWSCGVTLYVMLVGAYPF------EDQ-------------------- 117
           L   R+Y   + D+W  G  +  M   + P       + Q                    
Sbjct: 200 LLGERDYGPPI-DLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITPEVWPNVD 257

Query: 118 --EDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             E  +       +   V+ ++  YV       +L+ ++ V +P++RI   +  +H +F
Sbjct: 258 NYELYEKLELVKGQKRKVKDRLKAYV-RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 43/209 (20%), Positives = 72/209 (34%), Gaps = 67/209 (32%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST---------------- 73
           S  + HRD+K  N LL+      +K+ DFG S+S +   R  +                 
Sbjct: 127 SGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184

Query: 74  ------VGTPAYIAPEV-LSRREYDGKLADVWSCGVTLYVMLVG---------------- 110
                 V T  Y APE+ L   +Y  K  D+WS G  L  +L G                
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYT-KGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243

Query: 111 -------------------------AYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
                                    +   + +    N R   ++   +  KI      ++
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
           +  +LL ++   NP++RI+  +   HP+ 
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFV 332

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 43/207 (20%), Positives = 71/207 (34%), Gaps = 61/207 (29%)

Query: 32  QICHRDLKLENTLLDGSPA-----------------PRLKICDFGYSKSSLLHSRPKST- 73
           ++ H DLK EN L   S                   P +K+ DFG   S+       ST 
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SATYDDEHHSTL 194

Query: 74  VGTPAYIAPEVLSRREYDGKLADVWSCGVTLY---------------------VMLVGAY 112
           V T  Y APEV+    +     DVWS G  L                        ++G  
Sbjct: 195 VSTRHYRAPEVILALGWSQPC-DVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253

Query: 113 P-------------FEDQEDPKNFRKTISRIMAVQYKIPDYVHIS----QDCRNLLSRIF 155
           P               D+ D          +      + +++       +   +L+ ++ 
Sbjct: 254 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML 313

Query: 156 VANPSRRITIKEIKSHPWFLKNLPREL 182
             +P++RIT++E   HP+F   L + +
Sbjct: 314 EYDPAKRITLREALKHPFF-DLLKKSI 339

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 46/222 (20%), Positives = 67/222 (30%), Gaps = 80/222 (36%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA----------- 78
              I HRDLK  N LL+      +K+CDFG +++                          
Sbjct: 147 ESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204

Query: 79  ------------YIAPEV-LSRREYDGKLADVWSCGVTLYVMLVG--------------- 110
                       Y APE+ L +  Y  K  D+WS G     +L                 
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYT-KSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF 263

Query: 111 ---------AYPFEDQEDPKNFRKTISRIM------------------AVQY--KIPD-- 139
                          +   K+ R  ++ I                    ++Y    P   
Sbjct: 264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRK 323

Query: 140 -------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                  Y  IS D  NLL  +   NP++RITI +   HP+ 
Sbjct: 324 PINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 17/100 (17%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-----GTPAYIAPEVL 85
               HRD+K  N LLD +     KI DFG ++        ++ +     GT AY+APE L
Sbjct: 152 NHHIHRDIKSANILLDEAFTA--KISDFGLAR--ASEKFAQTVMTSRIVGTTAYMAPEAL 207

Query: 86  SRREYDGKL---ADVWSCGVTLYVMLVGAYPFEDQEDPKN 122
                 G++   +D++S GV L  ++ G    ++  +P+ 
Sbjct: 208 R-----GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 45/166 (27%)

Query: 51  PRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG 110
            ++KI D G   +  +H      + T  Y + EVL    Y+   AD+WS     + +  G
Sbjct: 233 LKVKIADLG--NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP-ADIWSTACMAFELATG 289

Query: 111 AYPFE--DQEDPKNFRKTISRIMAVQYKIP------------------DYVHIS------ 144
            Y FE    E+       I+ I+ +  K+P                  D  HI+      
Sbjct: 290 DYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349

Query: 145 ----------------QDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                               + L  +    P +R T  E   HPW 
Sbjct: 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 4e-08
 Identities = 42/282 (14%), Positives = 83/282 (29%), Gaps = 73/282 (25%)

Query: 4   GVSSLSEFVMLEGSVKMKPD--IFFSSLS------------QQICHRDLKLENTLLDGSP 49
           G + ++  V L   V+ K D  IF+ +L             Q++ ++      +  D S 
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 50  APRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWS---------- 99
             +L+I         LL S+P         +   VL          +V +          
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYEN----CLL---VL-----L----NVQNAKAWNAFNLS 265

Query: 100 C---------GVTLYVMLVGAYPFEDQEDPKNFRKTISR-IMAVQYKIPDYVHIS-QDCR 148
           C          VT ++                      + ++        Y+    QD  
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL------KYLDCRPQDLP 319

Query: 149 NLLSRIFVANPSRRITI--KEIKSHP--W-FLKNLPRELTETAQAIYYRKENPTFSLQSV 203
             +      NP RR++I  + I+     W   K++  +   T          P    +  
Sbjct: 320 REVLTT---NP-RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 204 EEITKIVEEAKVPPPVSRSIGGFGWGGEEDGDEKEEETDADE 245
           + ++     A +P  +   I    W    D  + +     ++
Sbjct: 376 DRLSVFPPSAHIPTILLSLI----WF---DVIKSDVMVVVNK 410

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 38/207 (18%), Positives = 64/207 (30%), Gaps = 68/207 (32%)

Query: 32  QICHRDLKLENTLLDGSPA-----------------------PRLKICDFGYSKSSLLHS 68
            + H DLK EN LLD                             +K+ DFG    +   S
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG---CATFKS 213

Query: 69  RPKST-VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA--YPFEDQED------ 119
               + + T  Y APEV+    +D    D+WS G  L  +  G+  +   +  +      
Sbjct: 214 DYHGSIINTRQYRAPEVILNLGWDVSS-DMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272

Query: 120 ------PKNFRKTISRIMAVQY--------------KIPDYVHISQDCR----------- 148
                 PKN     ++    +Y                 + +   + C            
Sbjct: 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332

Query: 149 -NLLSRIFVANPSRRITIKEIKSHPWF 174
            + L  I   +P+ R +  E+  H + 
Sbjct: 333 CDFLYSILQIDPTLRPSPAELLKHKFL 359

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 17/80 (21%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTV-----GTPAYIAPEVLSR 87
           I HRD+K  N LLD        + DFG +K   L     + V     GT  +IAPE LS 
Sbjct: 155 IIHRDVKAANILLDEEFEA--VVGDFGLAK---LMDYKDTHVTTAVRGTIGHIAPEYLST 209

Query: 88  REYDGKL---ADVWSCGVTL 104
               GK     DV+  GV L
Sbjct: 210 ----GKSSEKTDVFGYGVML 225

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 12/84 (14%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK-STV--GTPAYIAPEVLSRRE 89
           I HRD+K  N LLD +  P  KI DFG SK      +   STV  GT  YI PE   +  
Sbjct: 160 IIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK-- 215

Query: 90  YDGKL---ADVWSCGVTLYVMLVG 110
             G+L   +DV+S GV L+ +L  
Sbjct: 216 --GRLTEKSDVYSFGVVLFEVLCA 237

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 12/112 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYI-----APE 83
           S++  HRDL   N L+  S A  +KI DFG +K  LL        V  P        APE
Sbjct: 145 SRRCVHRDLAARNILV-ESEA-HVKIADFGLAK--LLPLDKDYYVVREPGQSPIFWYAPE 200

Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQ 134
            LS   +  + +DVWS GV LY +            +          + A+ 
Sbjct: 201 SLSDNIFSRQ-SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 19/158 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S+   HRDL   N L+       LKI DFG S+         +  G    +     APE 
Sbjct: 231 SKCCIHRDLAARNCLVTEKNV--LKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEA 286

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L+   Y  + +DVWS G+ L+    +GA P+ +     N ++T   +     ++P     
Sbjct: 287 LNYGRYSSE-SDVWSFGILLWETFSLGASPYPNL---SN-QQTREFVEK-GGRLPCPELC 340

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
                 L+ + +   P +R +   I      L+++ + 
Sbjct: 341 PDAVFRLMEQCWAYEPGQRPSFSTIY---QELQSIRKR 375

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 10/88 (11%), Positives = 20/88 (22%), Gaps = 29/88 (32%)

Query: 33  ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDG 92
           +           +  S    +                    +  PA +            
Sbjct: 150 VALSIDHPSRVRV--SIDGDVV-------------------LAYPATMPDA--------N 180

Query: 93  KLADVWSCGVTLYVMLVGAYPFEDQEDP 120
              D+   G +LY +LV  +P  +    
Sbjct: 181 PQDDIRGIGASLYALLVNRWPLPEAGVR 208

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           +++  HRDL   N L+  +   R+KI DFG +K  L   +    V  P        APE 
Sbjct: 132 TKRYIHRDLATRNILV-ENEN-RVKIGDFGLTKV-LPQDKEFFKVKEPGESPIFWYAPES 188

Query: 85  LSRREYDGKLADVWSCGVTLY 105
           L+  ++    +DVWS GV LY
Sbjct: 189 LTESKFSVA-SDVWSFGVVLY 208

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           +++  HRDL   N L+  +   R+KI DFG +K  L   +    V  P        APE 
Sbjct: 163 TKRYIHRDLATRNILV-ENEN-RVKIGDFGLTKV-LPQDKEYYKVKEPGESPIFWYAPES 219

Query: 85  LSRREYDGKLADVWSCGVTLY 105
           L+  ++    +DVWS GV LY
Sbjct: 220 LTESKFSVA-SDVWSFGVVLY 239

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 7/86 (8%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGT--P-AYIAPEVLSRREYD 91
           HRDL   N L+  +P   +KI DFG +K      +     G   P  ++A E +  R Y 
Sbjct: 140 HRDLAARNVLV-KTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197

Query: 92  GKLADVWSCGVTLY-VMLVGAYPFED 116
            + +DVWS GVT++ +M  G+ P++ 
Sbjct: 198 HQ-SDVWSYGVTVWELMTFGSKPYDG 222

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 6/90 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAY--IAPEVLSR 87
            +   HR+L   N L+  +    +K+ DFG S+     +              APE L+ 
Sbjct: 336 KKNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393

Query: 88  REYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            ++  K +DVW+ GV L+ +   G  P+  
Sbjct: 394 NKFSIK-SDVWAFGVLLWEIATYGMSPYPG 422

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 46/190 (24%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPA----------- 78
           S  I HRDLK  N L++      +K+CDFG +++        S +               
Sbjct: 174 SAGILHRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231

Query: 79  -----------------YIAPEV-LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP 120
                            Y APE+ L +  Y  +  DVWS G     +L      ++    
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYT-EAIDVWSIGCIFAELLNMI---KENVAY 287

Query: 121 KNFRKTI------SRIMAVQYKIPDYVHISQDCRNLLSRIF--VANPSRRITIKEIKSHP 172
              R  +        +   Q    D+   ++  R+ L+ IF  +  PS    I+ ++   
Sbjct: 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE-DIEALEKED 346

Query: 173 W--FLKNLPR 180
              +++  P+
Sbjct: 347 AKRYIRIFPK 356

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--RPKSTVGTPA-YIAPEVLS 86
           S++  HRDL   N LL       +KICDFG ++          K     P  ++APE + 
Sbjct: 211 SRKCIHRDLAARNILLSEKNV--VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 268

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTI 127
            R Y  + +DVWS GV L+ +  +GA P+   +  + F + +
Sbjct: 269 DRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAY--IAPEVLSR 87
                HRDL+  N L+  +     K+ DFG ++    +               APE    
Sbjct: 298 RMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355

Query: 88  REYDGKLADVWSCGVTLY-VMLVGAYPFED 116
             +  K +DVWS G+ L  +   G  P+  
Sbjct: 356 GRFTIK-SDVWSFGILLTELTTKGRVPYPG 384

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 45.3 bits (108), Expect = 6e-06
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S++  HRDL   N LL  +    +KI DFG  ++ L  +     +     +     APE 
Sbjct: 139 SKRFIHRDLAARNLLL-ATRD-LVKIGDFGLMRA-LPQNDDHYVMQEHRKVPFAWCAPES 195

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           L  R +    +D W  GVTL+ +   G  P+  
Sbjct: 196 LKTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG 227

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 45.6 bits (108), Expect = 7e-06
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAY--IAPEVLSR 87
                HRDL+  N L+  +     K+ DFG ++    +               APE    
Sbjct: 381 RMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438

Query: 88  REYDGKLADVWSCGVTLY-VMLVGAYPFED 116
             +  K +DVWS G+ L  +   G  P+  
Sbjct: 439 GRFTIK-SDVWSFGILLTELTTKGRVPYPG 467

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           +Q   HRDL   N LL  +    +KI DFG +K+ +        V           APE 
Sbjct: 152 AQHYIHRDLAARNVLL-DNDR-LVKIGDFGLAKA-VPEGHEYYRVREDGDSPVFWYAPEC 208

Query: 85  LSRREYDGKLADVWSCGVTLY 105
           L   ++    +DVWS GVTLY
Sbjct: 209 LKEYKFYYA-SDVWSFGVTLY 228

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI---APEVLS 86
                HRDL   N L+        K+ DFG +K +       +       +   APE L 
Sbjct: 307 GNNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALR 359

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            +++  K +DVWS G+ L+ +   G  P+  
Sbjct: 360 EKKFSTK-SDVWSFGILLWEIYSFGRVPYPR 389

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 11/93 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
              + HR+L   N LL  SP+ ++++ DFG +   LL    K  + + A       A E 
Sbjct: 133 EHGMVHRNLAARNVLL-KSPS-QVQVADFGVAD--LLPPDDKQLLYSEAKTPIKWMALES 188

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           +   +Y  + +DVWS GVT++ +M  GA P+  
Sbjct: 189 IHFGKYTHQ-SDVWSYGVTVWELMTFGAEPYAG 220

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYI---APEVL 85
                HRDL   N L+D +     K+ DFG S+          +T G    I   APE +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLV--CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226

Query: 86  SRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           + R +    +DVWS GV ++ V+  G  P+ +
Sbjct: 227 AFRTFSSA-SDVWSFGVVMWEVLAYGERPYWN 257

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 12/94 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGT--P-AYIAPE 83
                HRDL   N LL  +     KI DFG SK   L +     K+      P  + APE
Sbjct: 135 ESNFVHRDLAARNVLL-VTQH-YAKISDFGLSK--ALRADENYYKAQTHGKWPVKWYAPE 190

Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            ++  ++  K +DVWS GV ++     G  P+  
Sbjct: 191 CINYYKFSSK-SDVWSFGVLMWEAFSYGQKPYRG 223

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 11/88 (12%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEVLSRRE 89
           HRDL   N L+  +P   +KI DFG +K  LL +  K        +     A E +  R 
Sbjct: 140 HRDLAARNVLV-KTPQ-HVKITDFGLAK--LLGAEEKEYHAEGGKVPIKWMALESILHRI 195

Query: 90  YDGKLADVWSCGVTLY-VMLVGAYPFED 116
           Y  + +DVWS GVT++ +M  G+ P++ 
Sbjct: 196 YTHQ-SDVWSYGVTVWELMTFGSKPYDG 222

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYI-----APE 83
           S+Q  HRDL   N L+  S   ++KI DFG +K   + +  +  TV           APE
Sbjct: 144 SRQYVHRDLAARNVLV-ESEH-QVKIGDFGLTK--AIETDKEYYTVKDDRDSPVFWYAPE 199

Query: 84  VLSRREYDGKLADVWSCGVTLY 105
            L + ++    +DVWS GVTL+
Sbjct: 200 CLMQSKFYIA-SDVWSFGVTLH 220

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 30/177 (16%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
            +   HRDL   N LL  +     KI DFG SK+ L       T  +         APE 
Sbjct: 128 EKNFVHRDLAARNVLL-VNRH-YAKISDFGLSKA-LGADDSYYTARSAGKWPLKWYAPEC 184

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRI-----MAVQYKIP 138
           ++ R++  + +DVWS GVT++  +  G  P++     K   + ++ I     M    + P
Sbjct: 185 INFRKFSSR-SDVWSYGVTMWEALSYGQKPYKKM---KG-PEVMAFIEQGKRMECPPECP 239

Query: 139 DYVH-ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKE 194
             ++ +  DC              R     ++     ++     L    +  ++   
Sbjct: 240 PELYALMSDCWI-------YKWEDRPDFLTVE---QRMRACYYSLASKVEGHHHHHH 286

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-KSTVGTPAYI---APEVL 85
           +    HRDL   N L++ +     K+ DFG S+          +T G    I   APE +
Sbjct: 165 NMNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222

Query: 86  SRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           S R++    +DVWS G+ ++ VM  G  P+ +
Sbjct: 223 SYRKFTSA-SDVWSFGIVMWEVMTYGERPYWE 253

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 42.6 bits (100), Expect = 7e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 12/89 (13%)

Query: 35  HRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYI---APEVLSRR 88
           HR+L   N LL  +     KI DFG SK   L +      +       +   APE ++ R
Sbjct: 459 HRNLAARNVLL-VNRH-YAKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPECINFR 514

Query: 89  EYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           ++  + +DVWS GVT++  +  G  P++ 
Sbjct: 515 KFSSR-SDVWSYGVTMWEALSYGQKPYKK 542

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYI-----APE 83
                HRD+   N LL      R+ KI DFG ++   ++       G  A +      PE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWMPPE 215

Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPF 114
                 +  K  D WS GV L+ +  +G  P+
Sbjct: 216 AFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPY 246

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.8 bits (99), Expect = 8e-05
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 16/93 (17%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
                HRDL   N L+  S     K+ DFG +       +  S+      +     APE 
Sbjct: 135 GNNFVHRDLAARNVLV--SEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEA 185

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
           L  +++  K +DVWS G+ L+ +   G  P+  
Sbjct: 186 LREKKFSTK-SDVWSFGILLWEIYSFGRVPYPR 217

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYI-----APE 83
                HRD+   N LL      R+ KI DFG ++   ++       G  A +      PE
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD--IYRAGYYRKGGCAMLPVKWMPPE 256

Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPF 114
                 +  K  D WS GV L+ +  +G  P+
Sbjct: 257 AFMEGIFTSK-TDTWSFGVLLWEIFSLGYMPY 287

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S++  HRDL   N L+  +    +KI DFG ++   +H        T   +     APE 
Sbjct: 209 SKKCIHRDLAARNVLV--TEDNVMKIADFGLAR--DIHHIDYYKKTTNGRLPVKWMAPEA 264

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L  R Y  + +DVWS GV L+ +  +G  P+      + F+          +++    + 
Sbjct: 265 LFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-----HRMDKPSNC 318

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSV 203
           + +   ++   + A PS+R T K++      L  +    +      Y+   +  + + + 
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLV---EDLDRIVALTSNQEMGYYHHHHHHDYDIPTT 375

Query: 204 EEI 206
           E +
Sbjct: 376 ENL 378

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 12/94 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYI---APE 83
                HRDL   N L++ +     K+ DFG  +  +L   P    +T G    I   +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLV--CKVSDFGLGR--VLEDDPEAAYTTRGGKIPIRWTSPE 220

Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            ++ R++    +DVWS G+ L+ VM  G  P+ +
Sbjct: 221 AIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWE 253

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI---APEVLS 86
            +   HRDL+  N L+  S     KI DFG ++  +  +   +  G    I   APE ++
Sbjct: 302 QRNYIHRDLRAANILVSASLV--CKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAIN 358

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
              +  K +DVWS G+ L  ++  G  P+  
Sbjct: 359 FGSFTIK-SDVWSFGILLMEIVTYGRIPYPG 388

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGT-PA-YIAPEVLSR 87
            +   HRDL   N L+  +    +K+ DFG S+     +         P  + APE L+ 
Sbjct: 129 KKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186

Query: 88  REYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            ++  K +DVW+ GV L+ +   G  P+  
Sbjct: 187 NKFSIK-SDVWAFGVLLWEIATYGMSPYPG 215

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI---APEVLS 86
              + HRDL   N L+  +    +K+ DFG ++  +L  +  S+ GT   +   +PEV S
Sbjct: 122 EACVIHRDLAARNCLVGENQV--IKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 178

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
              Y  K +DVWS GV ++ V   G  P+E+
Sbjct: 179 FSRYSSK-SDVWSFGVLMWEVFSEGKIPYEN 208

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI---APEVLS 86
           S Q  HRDL   N L+D      +K+ DFG ++  +L  +  S+VGT   +   APEV  
Sbjct: 122 SHQFIHRDLAARNCLVDRDLC--VKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAPEVFH 178

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
             +Y  K +DVW+ G+ ++ V  +G  P++ 
Sbjct: 179 YFKYSSK-SDVWAFGILMWEVFSLGKMPYDL 208

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVG------TPAYIAPE 83
            +   HRDL+  N L+  + +   KI DFG ++    +              T    APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWT----APE 180

Query: 84  VLSRREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
            ++   +  K +DVWS G+ L  ++  G  P+  
Sbjct: 181 AINYGTFTIK-SDVWSFGILLTEIVTHGRIPYPG 213

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 22/173 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           SQ+  HRDL   N L+  +    +KI DFG ++   +++       T   +     APE 
Sbjct: 175 SQKCIHRDLAARNVLVTENNV--MKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEA 230

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L  R Y  + +DVWS GV ++ +  +G  P+      + F+          +++    + 
Sbjct: 231 LFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-----HRMDKPANC 284

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENP 196
           + +   ++   + A PS+R T K++         L R LT T    Y     P
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVED------LDRILTLTTNEEYLDLSQP 331

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S+   HRD+   N LL  +     KI DFG ++   + +     V   A +     APE 
Sbjct: 182 SKNCIHRDVAARNVLL--TNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPES 237

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISR--IMAVQYKIPDYV 141
           +    Y  + +DVWS G+ L+ +  +G  P+        F K +     MA     P  +
Sbjct: 238 IFDCVYTVQ-SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNI 296

Query: 142 H-ISQDCRNLLSRIFVANPSRRITIKEIKSH 171
           + I Q C           P+ R T ++I S 
Sbjct: 297 YSIMQACWA-------LEPTHRPTFQQICSF 320

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 22/164 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           SQ+  HRDL   N L+  +    +KI DFG ++   +++       T   +     APE 
Sbjct: 221 SQKCIHRDLAARNVLV--TENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEA 276

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           L  R Y  + +DVWS GV ++ +  +G  P+      + F+          +++    + 
Sbjct: 277 LFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-----HRMDKPANC 330

Query: 144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQ 187
           + +   ++   + A PS+R T K++         L R LT T  
Sbjct: 331 TNELYMMMRDCWHAVPSQRPTFKQLVED------LDRILTLTTN 368

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S+   HRDL   N +L       + + DFG S+   ++S      G  + +     A E 
Sbjct: 155 SRNFIHRDLAARNCMLAEDMT--VCVADFGLSR--KIYSGDYYRQGCASKLPVKWLALES 210

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPF 114
           L+   Y    +DVW+ GVT++ +M  G  P+
Sbjct: 211 LADNLYTVH-SDVWAFGVTMWEIMTRGQTPY 240

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S+   HRDL   N LL        KICDFG ++   + +     V   A +     APE 
Sbjct: 163 SKNCIHRDLAARNILLTHGRI--TKICDFGLAR--DIKNDSNYVVKGNARLPVKWMAPES 218

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYP 113
           +    Y  + +DVWS G+ L+ +  +G+ P
Sbjct: 219 IFNCVYTFE-SDVWSYGIFLWELFSLGSSP 247

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 23/157 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           SQ   HRDL   N L+       +KI DFG S+   ++S     VG    +      PE 
Sbjct: 151 SQHFVHRDLATRNCLV--GANLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPES 206

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPFEDQEDPKNFRKTIS-RIMAVQYKIPDYVH 142
           +  R++  + +DVWS GV L+ +   G  P+    + +        R++      P  V+
Sbjct: 207 IMYRKFTTE-SDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVY 265

Query: 143 -ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL 178
            +   C           P +R+ IKEI      L  L
Sbjct: 266 DVMLGCWQ-------REPQQRLNIKEIY---KILHAL 292

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI---APEVLS 86
           S+Q  HRDL   N L++      +K+ DFG S+  +L     S+VG+   +    PEVL 
Sbjct: 138 SKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM 194

Query: 87  RREYDGKLADVWSCGVTLY-VMLVGAYPFED 116
             ++  K +D+W+ GV ++ +  +G  P+E 
Sbjct: 195 YSKFSSK-SDIWAFGVLMWEIYSLGKMPYER 224

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           S++  HRDL   N LL       +KICDFG ++   ++  P       A +     APE 
Sbjct: 166 SRKCIHRDLAARNILLSEKNV--VKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPET 221

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPF 114
           +  R Y  + +DVWS GV L+ +  +GA P+
Sbjct: 222 IFDRVYTIQ-SDVWSFGVLLWEIFSLGASPY 251

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
           ++   HRDL   N +L       + + DFG SK   ++S      G  A +     A E 
Sbjct: 165 NRNFLHRDLAARNCMLRDDMT--VCVADFGLSK--KIYSGDYYRQGRIAKMPVKWIAIES 220

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYPF 114
           L+ R Y  K +DVW+ GVT++ +   G  P+
Sbjct: 221 LADRVYTSK-SDVWAFGVTMWEIATRGMTPY 250

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 39.2 bits (92), Expect = 9e-04
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 14/90 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYI-----APEV 84
            +Q  HRDL   N L+  +     KI DFG S+   ++        T   +     A E 
Sbjct: 160 QKQFIHRDLAARNILVGENYV--AKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIES 212

Query: 85  LSRREYDGKLADVWSCGVTLY-VMLVGAYP 113
           L+   Y    +DVWS GV L+ ++ +G  P
Sbjct: 213 LNYSVYTTN-SDVWSYGVLLWEIVSLGGTP 241

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	265
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.98
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.98
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.98
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.98
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.98
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.98
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.98
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.98
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.98
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.98
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.98
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.98
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.97
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.97
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.96
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.88
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.67
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.41
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.23
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.78
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.71
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.69
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.64
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.45
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.05
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.97
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.88
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.19
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.26
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.96
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.57
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	93.38
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.2
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.07
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	92.74
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	92.72
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	92.51
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	91.42
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	90.47
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	89.97
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	89.74
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	89.52
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	88.62
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	87.86
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.01
3mes_A	424	Choline kinase; malaria, structural genomics, stru	83.18
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	81.44

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.4e-47  Score=316.65  Aligned_cols=173  Identities=36%  Similarity=0.604  Sum_probs=137.4

Q ss_pred             CcccccchHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK   71 (265)
Q Consensus         1 me~~~~sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~   71 (265)
                      ||||+++|.+++..++.         ++|++.||.|||++||+||||||+|||++.++.  +||+|||+|+.........
T Consensus        92 mEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~~~~~~  169 (275)
T 3hyh_A           92 IEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN--VKIADFGLSNIMTDGNFLK  169 (275)
T ss_dssp             EECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCC--EEECCSSCC----------
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCC--EEEeecCCCeecCCCCccC
Confidence            89999999999987653         778999999999999999999999999988776  9999999998665555556


Q ss_pred             CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 024572           72 STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL  151 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  151 (265)
                      +.+||+.|+|||++.+..+++.++||||+||++|+|++|+.||.+.+..    .....+.......|  ..+++++++||
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~----~~~~~i~~~~~~~p--~~~s~~~~~li  243 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP----VLFKNISNGVYTLP--KFLSPGAAGLI  243 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHTCCCCC--TTSCHHHHHHH
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHcCCCCCC--CCCCHHHHHHH
Confidence            6789999999999999888777799999999999999999999875432    33344444444444  36899999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCcccCCCCChh
Q 024572          152 SRIFVANPSRRITIKEIKSHPWFLKNLPRE  181 (265)
Q Consensus       152 ~~~L~~dP~~R~s~~ell~h~~f~~~~~~~  181 (265)
                      .+||..||.+|||+.++++||||+..+|..
T Consensus       244 ~~~L~~dP~~R~s~~eil~hpw~k~~~p~~  273 (275)
T 3hyh_A          244 KRMLIVNPLNRISIHEIMQDDWFKVDLPEY  273 (275)
T ss_dssp             HHHSCSSGGGSCCHHHHHHCHHHHTTCCGG
T ss_pred             HHHccCChhHCcCHHHHHcCcccccCCChh
Confidence            999999999999999999999998877653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=6.3e-45  Score=310.62  Aligned_cols=173  Identities=27%  Similarity=0.469  Sum_probs=142.1

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~   70 (265)
                      ||||.+ +|.+++....        ++.|++.+|.|||++|||||||||+||||+.++.  +||+|||+|+..... ...
T Consensus       150 mEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~~~~  227 (346)
T 4fih_A          150 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRR  227 (346)
T ss_dssp             ECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSSSCCB
T ss_pred             EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCC--EEEecCcCceecCCCCCcc
Confidence            899986 9999887543        3778999999999999999999999999998876  999999999865433 334


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.+||+.|||||++.+..|+ .++|||||||++|+|++|+.||.+......+..+..   ......+.+..+++++++|
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~-~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~~~~~~~~~~~s~~~~dl  303 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYG-PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGF  303 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SSCCCCSCGGGSCHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CCCCCCCccccCCHHHHHH
Confidence            567899999999999988885 559999999999999999999987654433322211   1222334455789999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..||++|||+.++++||||++..+
T Consensus       304 i~~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          304 LDRLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            99999999999999999999999987654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.6e-45  Score=305.24  Aligned_cols=168  Identities=28%  Similarity=0.528  Sum_probs=140.9

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||||.+ +|.+++..++.         +.||+.+|.|||++|||||||||+|||++.++.  +||+|||+|+.....   
T Consensus       111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~--vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTTTC
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCC--EEEEEcCCceecCCCCCc
Confidence            899977 99999987653         678999999999999999999999999988776  999999999865432   


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ....+.+||+.|||||++.+..|+ .++|||||||++|+|++|+.||.+.+..    ..+..+....+.+|.  .+++++
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~-~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~~~~~~p~--~~s~~~  261 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKIIKLEYDFPE--KFFPKA  261 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBC-HHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHTCCCCCT--TCCHHH
T ss_pred             ccccCcccCcccCCHHHHcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCCCCc--ccCHHH
Confidence            233456899999999999988875 5699999999999999999999876543    334444455555554  689999


Q ss_pred             HHHHHHhcccCCCCCCCHHH------HhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKE------IKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~e------ll~h~~f~~~  177 (265)
                      ++||.+||.+||.+|||+.|      +++||||+.-
T Consensus       262 ~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             HHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence            99999999999999999988      5899999764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.9e-44  Score=299.15  Aligned_cols=169  Identities=22%  Similarity=0.391  Sum_probs=134.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcC--ceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||||.+ +|.+++...+         ++.||+.||.|||++|  ||||||||+|||+++ ++.  +||+|||+|+... .
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~--vKl~DFGla~~~~-~  184 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGLATLKR-A  184 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSC--EEECCTTGGGGCC-T
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCC--EEEEeCcCCEeCC-C
Confidence            799976 9999998764         3678999999999999  999999999999975 454  9999999997433 3


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ....+.+||+.|||||++.+ .|+ .++|||||||++|+|+||+.||.+......+..   .+.....+...+..+++++
T Consensus       185 ~~~~~~~GTp~YmAPE~~~~-~y~-~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~  259 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYEE-KYD-ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEV  259 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGT-CCC-THHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHH
T ss_pred             CccCCcccCccccCHHHcCC-CCC-cHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHH---HHHcCCCCCCCCccCCHHH
Confidence            33445689999999999875 464 569999999999999999999987655443332   2332222222334578999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||++|||+.++++||||++.
T Consensus       260 ~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          260 KEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999999999753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.7e-44  Score=311.82  Aligned_cols=173  Identities=27%  Similarity=0.469  Sum_probs=142.2

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~   70 (265)
                      ||||.+ +|.+++....        ++.+|+.||.|||++|||||||||+||||+.++.  +||+|||+|+..... ...
T Consensus       227 mEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~--vKl~DFGla~~~~~~~~~~  304 (423)
T 4fie_A          227 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRR  304 (423)
T ss_dssp             EECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCC--EEECCCTTCEECCSSCCCB
T ss_pred             EeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC--EEEecCccceECCCCCccc
Confidence            899986 9999887543        3778999999999999999999999999998876  999999999865433 334


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.+||+.|||||++.+..|+ .++|||||||++|+|++|+.||.+......+..+..   ......+.+..+++++++|
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~-~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~~~~~~~~~~~s~~~~dl  380 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYG-PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGF  380 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSCTTSSCHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CCCCCCcccccCCHHHHHH
Confidence            567899999999999988885 559999999999999999999987654433322211   1222344555789999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..||.+|||+.++|+||||++..+
T Consensus       381 i~~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          381 LDRLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            99999999999999999999999987544

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.7e-44  Score=301.44  Aligned_cols=168  Identities=33%  Similarity=0.501  Sum_probs=138.8

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||||.+ +|.+++..++.         +.|++.+|.|||++|||||||||+|||++.++.  +||+|||+|+.... ...
T Consensus       105 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~~~  182 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKK  182 (304)
T ss_dssp             ECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSC--EEEESSEEEEC-----CC
T ss_pred             EEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCC--EEecccccceeccCCCcc
Confidence            899976 99999987653         678999999999999999999999999998876  99999999985433 334


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ..+.+||+.|||||++.+..|+ .++|||||||++|+|++|+.||.+.+...    .+..+.......|  ..+|+++++
T Consensus       183 ~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~  255 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKE----TMTMILKAKLGMP--QFLSPEAQS  255 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHTSCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHH
T ss_pred             ccccccCcccCCHHHhccCCCC-CCCcccchHHHHHHHHhCCCCCCCcCHHH----HHHHHHcCCCCCC--CcCCHHHHH
Confidence            4567899999999999988876 45999999999999999999998765433    3333444444444  468999999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|||     ++++++||||+..
T Consensus       256 li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             HHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            999999999999998     5799999999753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.9e-44  Score=308.16  Aligned_cols=174  Identities=24%  Similarity=0.384  Sum_probs=141.9

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||||.+ +|.+++..+.           ++.||+.+|.|||++|||||||||+||||+.++.  +||+|||+|+......
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT--VQLGDFGIARVLNSTV  179 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCC--EEECSTTEESCCCHHH
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCC--EEEcccccceeecCCc
Confidence            899975 9999997542           3678999999999999999999999999988776  9999999998554321


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       .....+||+.|||||++.+..|+ .++|||||||++|+|++|+.||.+.+....+    ..+....+ .+.+..+++++
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~-~~~DiwSlGvilyemltG~~PF~~~~~~~~~----~~i~~~~~-~~~~~~~s~~~  253 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLV----LKIISGSF-PPVSLHYSYDL  253 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHTCC-CCCCTTSCHHH
T ss_pred             ccccccCCCccccCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----HHHHcCCC-CCCCccCCHHH
Confidence             12345799999999999988875 5599999999999999999999876543333    33333333 23445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCChhh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL  182 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~~~  182 (265)
                      ++||.+||..||.+|||+.++|+||||++...+.+
T Consensus       254 ~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~  288 (350)
T 4b9d_A          254 RSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFL  288 (350)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSHHHHTTGGGTS
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHHhhcCCCcCC
Confidence            99999999999999999999999999987665443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=4.4e-43  Score=303.50  Aligned_cols=221  Identities=60%  Similarity=0.997  Sum_probs=156.2

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.+++||+|||+++........
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~  174 (361)
T 3uc3_A           95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP  174 (361)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC
Confidence            788854 9999886544         377899999999999999999999999998777667999999999755444455


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....||+.|+|||++.+..+.++++|||||||++|+|++|+.||.+......+...+..+.......+....+++.+++|
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  254 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL  254 (361)
T ss_dssp             ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHH
T ss_pred             CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHH
Confidence            56679999999999988888777689999999999999999999887766666777777777777777777899999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCChhhHHHHHHHhhhcCCCCCCCcCHHHHHHHHHHhCCCCCcccc
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAKVPPPVSRS  222 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                      |.+||..||.+|||+.++++||||.+..+......... ......+....++.+.+.+.+.....+....+.
T Consensus       255 i~~~L~~dP~~Rps~~ell~hp~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (361)
T 3uc3_A          255 ISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNT-GSQFQEPEQPMQSLDTIMQIISEATIPAVRNRC  325 (361)
T ss_dssp             HHHHSCSCTTTSCCHHHHHTSHHHHTTCCCC-------------------CCHHHHHHHHHHHTCC------
T ss_pred             HHHHccCChhHCcCHHHHHhCcchhcCCchhhhccccc-cccccCCcccccCHHHHHHHHhhccCccccccc
Confidence            99999999999999999999999988776554322211 122233345567788888888877776654443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.8e-43  Score=304.40  Aligned_cols=176  Identities=24%  Similarity=0.285  Sum_probs=142.1

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-----
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-----   66 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-----   66 (265)
                      |||++++|.+++..++         ++.||+.||.|||++|||||||||+|||++.++.  +||+|||+|+....     
T Consensus       138 mE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~--~Ki~DFGla~~~~~~~~~~  215 (398)
T 4b99_A          138 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE--LKIGDFGMARGLCTSPAEH  215 (398)
T ss_dssp             EECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC--EEECCCTTCBCC-------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCC--EEEeecceeeecccCcccc
Confidence            8999999999987544         4788999999999999999999999999998776  99999999975432     


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-----------
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-----------  135 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------  135 (265)
                      .....+.+||+.|+|||++.+..+.+.++||||+||++|+|++|++||.+.+....+..+.........           
T Consensus       216 ~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~  295 (398)
T 4b99_A          216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV  295 (398)
T ss_dssp             CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CH
T ss_pred             ccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhh
Confidence            223345689999999999988777677799999999999999999999987766555554433211110           


Q ss_pred             -----cCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          136 -----KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       136 -----~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                           ..+.         +..+++++++||.+||.+||.+|||+.++|+||||++..
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          296 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence                 0110         124689999999999999999999999999999998643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.9e-42  Score=297.62  Aligned_cols=175  Identities=25%  Similarity=0.403  Sum_probs=131.5

Q ss_pred             Cccccc-chHHHHH------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC------
Q 024572            1 MQLGVS-SLSEFVM------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH------   67 (265)
Q Consensus         1 me~~~~-sL~~~~~------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~------   67 (265)
                      |||+.+ +|.+++.      .+.++.|++.||.|||++|||||||||+|||++.+. +.+||+|||+|+.....      
T Consensus        99 mE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~-~~~kl~DFGla~~~~~~~~~~~~  177 (361)
T 4f9c_A           99 MPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL-KKYALVDFGLAQGTHDTKIELLK  177 (361)
T ss_dssp             EECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECTTCSCGGGG
T ss_pred             EeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC-CeEEECcCCCCcccCCccccccc
Confidence            799864 8988874      344588899999999999999999999999998652 25999999999743221      


Q ss_pred             -----------------------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHH
Q 024572           68 -----------------------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFR  124 (265)
Q Consensus        68 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~  124 (265)
                                             ......+||+.|+|||++.+...++.++||||+||++|+|++|+.||....+.....
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l  257 (361)
T 4f9c_A          178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTAL  257 (361)
T ss_dssp             GC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHH
Confidence                                   112345799999999999887655677999999999999999999997665433222


Q ss_pred             HHHHHHhh-----------------------------------hc--------------ccCCCCCCCCHHHHHHHHHhc
Q 024572          125 KTISRIMA-----------------------------------VQ--------------YKIPDYVHISQDCRNLLSRIF  155 (265)
Q Consensus       125 ~~~~~~~~-----------------------------------~~--------------~~~~~~~~~~~~~~~li~~~L  155 (265)
                      ..+..+..                                   ..              .....+..+++++++||.+||
T Consensus       258 ~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL  337 (361)
T 4f9c_A          258 AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLL  337 (361)
T ss_dssp             HHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHT
T ss_pred             HHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHC
Confidence            11111100                                   00              011223467899999999999


Q ss_pred             ccCCCCCCCHHHHhcCcccCC
Q 024572          156 VANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       156 ~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .+||.+|+|+.|+|+||||+.
T Consensus       338 ~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          338 DLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             CSCTTTSCCHHHHHTSGGGTT
T ss_pred             cCChhHCcCHHHHhcCcccCC
Confidence            999999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-42  Score=295.35  Aligned_cols=171  Identities=23%  Similarity=0.277  Sum_probs=136.3

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||||.+ +|.+++..++.         +.|++.+|.|||++|||||||||+||||+.++. ++||+|||+|+......  
T Consensus       129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC-CEEECCCTTCEEC------
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCC-EEEEeeCCCCeEccCCCcc
Confidence            899986 99999987653         678999999999999999999999999987752 49999999998654322  


Q ss_pred             ----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC-CCCCCC
Q 024572           69 ----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI-PDYVHI  143 (265)
Q Consensus        69 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  143 (265)
                          .....+||+.|||||++.+..|+. ++|||||||++|+|++|+.||.+......+..+..    ..... ..+..+
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~-~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~~  282 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKPCDA-KVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS----EPPPIREIPPSC  282 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCCCCT-HHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH----SCCGGGGSCTTS
T ss_pred             cceecCCccccCccccCHHHHCCCCCCc-HHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc----CCCCchhcCccC
Confidence                123357999999999999988764 59999999999999999999988665544443332    12111 123468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHH-------------hcCcccCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEI-------------KSHPWFLKN  177 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~el-------------l~h~~f~~~  177 (265)
                      ++.+++||.+||.+||.+|||+.|+             ++|||+...
T Consensus       283 s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          283 APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            9999999999999999999999997             578998654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.9e-40  Score=302.41  Aligned_cols=171  Identities=26%  Similarity=0.367  Sum_probs=140.4

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      |||+.+ +|.+++..++.         +.+|+.||.|||++|||||||||+||||+.++.  +||+|||+|+.... ...
T Consensus       271 mEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~--vKL~DFGlA~~~~~-~~~  347 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSK-KKP  347 (689)
T ss_dssp             ECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSS-CCC
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCC--EEecccceeeecCC-CCC
Confidence            899976 99999987663         678999999999999999999999999998876  99999999986543 334


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      .+.+||+.|||||++.+...++.++|||||||++|+|++|++||.+..... ...+...+.......|  ..+++++++|
T Consensus       348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-~~~i~~~i~~~~~~~p--~~~S~~a~dL  424 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELP--DSFSPELRSL  424 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-HHHHHHHHHHCCCCCC--TTSCHHHHHH
T ss_pred             CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCC--ccCCHHHHHH
Confidence            567899999999999754434566999999999999999999997654322 2233444444444444  4689999999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|++     +.+|++||||+..
T Consensus       425 I~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          425 LEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             HHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            99999999999998     7999999999764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=280.15  Aligned_cols=169  Identities=21%  Similarity=0.277  Sum_probs=127.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--   67 (265)
                      ||||.+ +|.+++..+.          ++.+++.||.|||+++||||||||+|||++.++.  +||+|||+|+.....  
T Consensus       110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~--~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT--VKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEE--EEECCCSSCBC------
T ss_pred             EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCc--EEEeeccCceecccCCc
Confidence            799986 9999997543          3678899999999999999999999999998775  999999999754322  


Q ss_pred             -CCCCCCcCCCCCcccccccCCc--CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           68 -SRPKSTVGTPAYIAPEVLSRRE--YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~~~--~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                       ......+||+.|||||++.+..  ..+.++|||||||++|+|+||+.||.+..........+............+..++
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  267 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP  267 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSC
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccch
Confidence             2234557999999999997532  2345699999999999999999999887665444333322111111112244689


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+.+||.+||..||++|||+.+++++
T Consensus       268 ~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          268 KAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999999988654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.9e-41  Score=281.58  Aligned_cols=166  Identities=22%  Similarity=0.334  Sum_probs=123.4

Q ss_pred             Cccccc-chHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||||.+ +|.+++..++            ++.|++.||.|||++|||||||||+|||++.++.  +||+|||+|+.....
T Consensus        94 mE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~--vKl~DFGla~~~~~~  171 (299)
T 4g31_A           94 MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQD  171 (299)
T ss_dssp             EECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCCCC------
T ss_pred             EecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCc--EEEccCccceecCCC
Confidence            799976 9999997543            3568899999999999999999999999988776  999999999754332


Q ss_pred             C-------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc
Q 024572           68 S-------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ  134 (265)
Q Consensus        68 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  134 (265)
                      .             .....+||+.|||||++.+..|+ .++|||||||++|+|++   ||....   .....+..+....
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyell~---Pf~~~~---~~~~~~~~~~~~~  244 (299)
T 4g31_A          172 EEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY---PFSTQM---ERVRTLTDVRNLK  244 (299)
T ss_dssp             --------------------CCCTTSCHHHHTTCCCC-THHHHHHHHHHHHHHHS---CCSSHH---HHHHHHHHHHTTC
T ss_pred             ccccccccccccccccCCcccCccccCHHHHcCCCCC-CHHHHHHHHHHHHHHcc---CCCCcc---HHHHHHHHHhcCC
Confidence            1             12335799999999999988875 55999999999999996   775421   1122222222222


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      + .+.+...++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       245 ~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          245 F-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             C-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             C-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence            1 1122245677889999999999999999999999999975

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.6e-40  Score=301.23  Aligned_cols=172  Identities=26%  Similarity=0.467  Sum_probs=142.8

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |||+.+ +|.+++..+          .++.||+.+|.|||++||+||||||+|||++.+..+.+||+|||+|+.......
T Consensus       233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            789875 999988643          247889999999999999999999999999876555699999999987665555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+..|. .++|||||||++|+|++|+.||.+......    +..+....+.++  .+..+++++
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~-~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~  387 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVG-YYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDG  387 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBC-HHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTTCCCCCSGGGTTSCHHH
T ss_pred             eeeeEECccccCHHHhCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHhCCCCCCcccccCCCHHH
Confidence            5567899999999999998875 559999999999999999999988665433    333344433333  345789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||.+|||+.++|+||||+..
T Consensus       388 ~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          388 KDFIRKLLLADPNTRMTIHQALEHPWLTPG  417 (573)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcCcCCC
Confidence            999999999999999999999999999854

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.5e-39  Score=279.34  Aligned_cols=164  Identities=23%  Similarity=0.347  Sum_probs=134.3

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||||.+ +|.+++..+.                         ++.||+.|+.|||+++||||||||+|||++.++.  +|
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~--vK  225 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV--VK  225 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EE
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCC--EE
Confidence            799987 9999997532                         2567999999999999999999999999998876  99


Q ss_pred             EeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+|+.......   ....+||+.|||||++.+..|+ .++|||||||++|||+| |+.||.+......+...+.. 
T Consensus       226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~-~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~-  303 (353)
T 4ase_A          226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-  303 (353)
T ss_dssp             ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-
T ss_pred             ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCC-CcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc-
Confidence            999999986543322   2234689999999999988875 55999999999999998 89999887655444443322 


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                         ..+.+.+..+++++.+||.+||..||.+|||+.+|++|
T Consensus       304 ---g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          304 ---GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence               23344455789999999999999999999999999987

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.2e-39  Score=271.31  Aligned_cols=163  Identities=21%  Similarity=0.305  Sum_probs=132.8

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||||.+ +|.+++..+.                         ++.+|+.|+.|||+++||||||||+||||+.++.  +|
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~--~K  185 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN--VK  185 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCC--EE
Confidence            789876 9999996532                         4668999999999999999999999999998876  99


Q ss_pred             EeccCCcccCCCC---CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLH---SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+|+.....   ......+||+.|||||++.+..++ .++|||||||++|||+| |+.||.+......    +..+
T Consensus       186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s-~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~----~~~i  260 (308)
T 4gt4_A          186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFS-IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV----VEMI  260 (308)
T ss_dssp             ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH----HHHH
T ss_pred             ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCC-ccchhhhHHHHHHHHHhCCCCCCCCCCHHHH----HHHH
Confidence            9999999754322   223345799999999999988875 55999999999999998 8999988654332    2222


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .. ....|.+..+++.+.+||.+||..||.+|||+.+|+++
T Consensus       261 ~~-~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          261 RN-RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             Hc-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            22 23345566899999999999999999999999999875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=6.5e-39  Score=273.11  Aligned_cols=163  Identities=20%  Similarity=0.325  Sum_probs=125.9

Q ss_pred             Cccccc-chHHHHHHh------------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEE
Q 024572            1 MQLGVS-SLSEFVMLE------------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKI   55 (265)
Q Consensus         1 me~~~~-sL~~~~~~~------------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl   55 (265)
                      |||+.+ +|.+++..+                        .++.+++.++.|||+++||||||||+|||++.++.  +||
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~--~Ki  199 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV--VKI  199 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE--EEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc--EEE
Confidence            799987 999998643                        34678999999999999999999999999998776  999


Q ss_pred             eccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHh
Q 024572           56 CDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIM  131 (265)
Q Consensus        56 ~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~  131 (265)
                      +|||+|+......   .....+||+.|||||++.+..++ .++|||||||++|||+| |+.||.+......+    ..+.
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~-~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~----~~i~  274 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI----DCIT  274 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCC-HHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH----HHHH
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCC-ccccccchHHHHHHHHcCCCCCCCCCCHHHHH----HHHH
Confidence            9999998543322   22345699999999999988875 55999999999999999 89999886543332    2222


Q ss_pred             hhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          132 AVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . ..+.+.+..+++++.+||.+||..||++|||+.+|+++
T Consensus       275 ~-g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          275 Q-GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             H-TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             c-CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            2 22344555799999999999999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.5e-39  Score=272.17  Aligned_cols=161  Identities=24%  Similarity=0.339  Sum_probs=130.3

Q ss_pred             Cccccc-chHHHHHHhc----------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEec
Q 024572            1 MQLGVS-SLSEFVMLEG----------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICD   57 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~D   57 (265)
                      ||||.+ +|.+++..++                      ++.+++.|+.|||+++||||||||+|||++.++.  +||+|
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~--~Ki~D  171 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL--VKIGD  171 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCc--EEECC
Confidence            799976 9999997642                      4778999999999999999999999999998876  99999


Q ss_pred             cCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhh
Q 024572           58 FGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        58 fg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      ||+|+......   ......||+.|||||++.+..++ .++|||||||++|||+| |+.||.+......    +..+...
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~-~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~----~~~i~~~  246 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEV----IECITQG  246 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH----HHHHHHT
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHH----HHHHHcC
Confidence            99997543322   12234689999999999988875 55999999999999998 8999988654332    2222222


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                       ...+.+..+++++.+||.+||..||++|||+.+++
T Consensus       247 -~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          247 -RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence             22344557999999999999999999999999994

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=5.6e-38  Score=268.08  Aligned_cols=169  Identities=34%  Similarity=0.637  Sum_probs=142.1

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++..++         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus        93 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~~  170 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKL  170 (328)
T ss_dssp             ECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECSTTCCGGGSSSCGG
T ss_pred             EECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCC--EEEeeccCceecCCCCcc
Confidence            78885 49999987654         3678999999999999999999999999988776  999999999766555555


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..+.+.++|||||||++|+|++|+.||.+....    .....+....+..|.  .+++++.+|
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~l  244 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----ELRERVLRGKYRIPF--YMSTDCENL  244 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHCCCCCCT--TSCHHHHHH
T ss_pred             ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCCCCCC--CCCHHHHHH
Confidence            56789999999999998888777799999999999999999999876543    333334444444444  589999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|||+.++++||||+..
T Consensus       245 i~~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          245 LKRFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             HHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             HHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence            999999999999999999999999754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.7e-38  Score=269.28  Aligned_cols=172  Identities=38%  Similarity=0.634  Sum_probs=141.6

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPK   71 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~   71 (265)
                      ||+++++|.+++..++         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.........
T Consensus        88 ~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~--~kl~DFG~s~~~~~~~~~~  165 (336)
T 3h4j_B           88 IEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLN--VKIADFGLSNIMTDGNFLK  165 (336)
T ss_dssp             ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCC--EEECCSSCTBTTTTSBTTC
T ss_pred             EECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCC--EEEEEeccceeccCCcccc
Confidence            7999999999887654         4678999999999999999999999999988775  9999999998665555556


Q ss_pred             CCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 024572           72 STVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLL  151 (265)
Q Consensus        72 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  151 (265)
                      ..+||+.|+|||++.+..+.+.++|||||||++|+|++|+.||.........    ..+......  .+..+++.+.+||
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i~~~~~~--~p~~~s~~~~~li  239 (336)
T 3h4j_B          166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----KKVNSCVYV--MPDFLSPGAQSLI  239 (336)
T ss_dssp             CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----CCCCSSCCC--CCTTSCHHHHHHH
T ss_pred             cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----HHHHcCCCC--CcccCCHHHHHHH
Confidence            6789999999999998887667799999999999999999999775432211    111111222  2335899999999


Q ss_pred             HHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          152 SRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       152 ~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      .+||..||.+|||+.++++||||+...+.
T Consensus       240 ~~~L~~dP~~Rpt~~eil~hp~~~~~~~~  268 (336)
T 3h4j_B          240 RRMIVADPMQRITIQEIRRDPWFNVNLPD  268 (336)
T ss_dssp             HTTSCSSGGGSCCHHHHTTCHHHHTTCCG
T ss_pred             HHHcCCChhHCcCHHHHHhChhhccCCcc
Confidence            99999999999999999999999876654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.9e-37  Score=259.14  Aligned_cols=174  Identities=23%  Similarity=0.275  Sum_probs=138.7

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+++++|.+++....           ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        98 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~  175 (308)
T 3g33_A           98 FEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT--VKLADFGLARIYSYQMA  175 (308)
T ss_dssp             EECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSC--EEECSCSCTTTSTTCCC
T ss_pred             ehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC--EEEeeCccccccCCCcc
Confidence            6888899999887643           4678899999999999999999999999987775  99999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cCC----------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIP----------  138 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~----------  138 (265)
                      .....+|+.|+|||++.+..++. ++|||||||++|+|++|+.||.+.........+......... .++          
T Consensus       176 ~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (308)
T 3g33_A          176 LTPVVVTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF  254 (308)
T ss_dssp             SGGGGCCCSSCCHHHHHTSCCCS-THHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGS
T ss_pred             cCCccccccccCchHHcCCCCCc-hHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence            55667999999999998877754 599999999999999999999887665555444433211110 000          


Q ss_pred             ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          139 ----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       139 ----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                ....+++.+.+||.+||..||.+|||+.++++||||++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence                      012478899999999999999999999999999999764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.2e-37  Score=269.10  Aligned_cols=176  Identities=25%  Similarity=0.297  Sum_probs=136.2

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-----
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-----   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-----   67 (265)
                      ||+++++|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+|+.....     
T Consensus        90 ~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~~~~  167 (388)
T 3oz6_A           90 FDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH--VKVADFGLSRSFVNIRRVTN  167 (388)
T ss_dssp             EECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEESSSCCCCCC
T ss_pred             ecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCC--EEecCCcccccccccccccc
Confidence            7899999998887543        4678999999999999999999999999988776  999999999754321     


Q ss_pred             -----------------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH
Q 024572           68 -----------------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        68 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~  130 (265)
                                       ......+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..++..+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~  247 (388)
T 3oz6_A          168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI  247 (388)
T ss_dssp             CGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence                             112335799999999999875545667999999999999999999999876655544443221


Q ss_pred             hhhc-----------------------------------------ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572          131 MAVQ-----------------------------------------YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus       131 ~~~~-----------------------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                      ....                                         ........+++.+.+||.+||..||.+|||+.+++
T Consensus       248 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l  327 (388)
T 3oz6_A          248 DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDAL  327 (388)
T ss_dssp             CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred             CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHh
Confidence            1000                                         00011225789999999999999999999999999


Q ss_pred             cCcccCCCC
Q 024572          170 SHPWFLKNL  178 (265)
Q Consensus       170 ~h~~f~~~~  178 (265)
                      +||||+...
T Consensus       328 ~Hp~~~~~~  336 (388)
T 3oz6_A          328 KHPFVSIFH  336 (388)
T ss_dssp             TSTTTTTTC
T ss_pred             CCHHHHHhc
Confidence            999997543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.4e-36  Score=257.58  Aligned_cols=175  Identities=24%  Similarity=0.319  Sum_probs=137.7

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        98 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~  175 (311)
T 3niz_A           98 FEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRS  175 (311)
T ss_dssp             EECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEETTSCCC-
T ss_pred             EcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCC--EEEccCcCceecCCCccc
Confidence            7889999888877543          3678999999999999999999999999988775  999999999755432 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc-C-----------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-I-----------  137 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~-----------  137 (265)
                      .....+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.........+.......... .           
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  255 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ  255 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence            3345789999999999875544567999999999999999999998877766655554432211100 0           


Q ss_pred             ---C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          138 ---P---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       138 ---~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                         .         ....+++++.+||.+||..||.+|||+.++++||||+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred             cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence               0         012467899999999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.3e-36  Score=254.58  Aligned_cols=174  Identities=25%  Similarity=0.380  Sum_probs=139.1

Q ss_pred             Cccc-ccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLG-VSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++ +++|.+++..+.        ++.+++.++.|||++||+||||||+|||++.++.  +||+|||++....... ..
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~  173 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR  173 (297)
T ss_dssp             EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSTTCCB
T ss_pred             EECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCC--EEEeeCCCceecCCccccc
Confidence            7888 459999887543        4778899999999999999999999999988776  9999999987544332 23


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.............   .........+..++..+.+|
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l  249 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDF  249 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSCGGGSCHHHHHH
T ss_pred             CCccCCcCccChhhhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCCCCccccCHHHHHH
Confidence            345799999999999888775 45999999999999999999998765433332222   12222333445689999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      |.+||..||.+|||+.++++||||+...+.
T Consensus       250 i~~~l~~dp~~Rps~~ell~h~~~~~~~~~  279 (297)
T 3fxz_A          250 LNRCLEMDVEKRGSAKELLQHQFLKIAKPL  279 (297)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHHHccCChhHCcCHHHHhhChhhcccCcc
Confidence            999999999999999999999999866543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.5e-36  Score=257.77  Aligned_cols=168  Identities=30%  Similarity=0.522  Sum_probs=136.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         .+.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCCTTCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCC--EEEeeccchhhcccCCCc
Confidence            788865 9988887654         3567899999999999999999999999988776  99999999975332 233


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..+. .++|+|||||++|+|++|+.||.+.....    ....+.......|  ..+++++++
T Consensus       162 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~  234 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHER----LFELILMEEIRFP--RTLSPEAKS  234 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHH
T ss_pred             ccccccChhhCChhhhcCCCCC-chhhcccchhHHHHHhcCCCCCCCCCHHH----HHHHHHcCCCCCC--CCCCHHHHH
Confidence            4456799999999999887775 45999999999999999999998765432    2233333333444  368999999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||     ++.++++||||+..
T Consensus       235 li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            99999999999999     89999999999754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.7e-36  Score=263.44  Aligned_cols=172  Identities=27%  Similarity=0.439  Sum_probs=136.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC-CCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL-LHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~-~~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+|+... ....
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~~~~  209 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDT  209 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC
T ss_pred             EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCC--EEEeecceeeecccCCCc
Confidence            788866 9988887654         3677899999999999999999999999988876  9999999997532 3334


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH-----HHHHHHHHhhhcccCCCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN-----FRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||........     .......+.......|.  .++
T Consensus       210 ~~~~~gt~~Y~aPE~l~~~~~~-~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~--~~s  286 (396)
T 4dc2_A          210 TSTFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLS  286 (396)
T ss_dssp             BCCCCBCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT--TSC
T ss_pred             cccccCCcccCCchhhcCCCCC-hHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC--cCC
Confidence            4566899999999999988775 559999999999999999999975432111     12233333444444443  689


Q ss_pred             HHHHHHHHHhcccCCCCCCCH------HHHhcCcccCCC
Q 024572          145 QDCRNLLSRIFVANPSRRITI------KEIKSHPWFLKN  177 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~------~ell~h~~f~~~  177 (265)
                      ..+++||.+||..||.+||++      .++++||||+..
T Consensus       287 ~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            999999999999999999985      799999999753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.2e-36  Score=256.95  Aligned_cols=177  Identities=23%  Similarity=0.328  Sum_probs=138.2

Q ss_pred             CcccccchHHHHHHhc---------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGVSSLSEFVMLEG---------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.++|.+++..+.               ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        82 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           82 FEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ--LKLGDFGLARAFG  159 (317)
T ss_dssp             EECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCSSCEETT
T ss_pred             EEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCC--EEECcCccceecC
Confidence            7899999999887653               2458899999999999999999999999988776  9999999997554


Q ss_pred             CC-CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc---------
Q 024572           66 LH-SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY---------  135 (265)
Q Consensus        66 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---------  135 (265)
                      .. .......+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.........+.........         
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence            32 22344578999999999987554456699999999999999999999887665544444332211000         


Q ss_pred             -------------------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          136 -------------------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       136 -------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                                         .......++..+.+||.+||..||.+|||+.++++||||++...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence                               00011247889999999999999999999999999999986543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=8.3e-37  Score=269.83  Aligned_cols=177  Identities=24%  Similarity=0.309  Sum_probs=136.6

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+++++|.+++..+.           ++.+++.+|.|||++||+||||||+|||++.++...+||+|||+++...  ..
T Consensus       178 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~--~~  255 (429)
T 3kvw_A          178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QR  255 (429)
T ss_dssp             ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT--CC
T ss_pred             EeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC--Cc
Confidence            7899999999988654           3778899999999999999999999999988765559999999986432  33


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--------------  135 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------  135 (265)
                      ....++|+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+..++........              
T Consensus       256 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~  334 (429)
T 3kvw_A          256 VYTYIQSRFYRAPEVILGARYG-MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS  334 (429)
T ss_dssp             CCSSCSCGGGCCHHHHHTBCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred             ccccCCCCCccChHHHhCCCCC-chHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence            4456799999999999988775 5599999999999999999999887665554444332110000              


Q ss_pred             --cC-----------------------------CC--------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          136 --KI-----------------------------PD--------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       136 --~~-----------------------------~~--------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                        ..                             +.        ....++.+.+||.+||..||.+|||+.++|+||||++
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~  414 (429)
T 3kvw_A          335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR  414 (429)
T ss_dssp             TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-
T ss_pred             CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhcc
Confidence              00                             00        0123678999999999999999999999999999987


Q ss_pred             CCCh
Q 024572          177 NLPR  180 (265)
Q Consensus       177 ~~~~  180 (265)
                      ..+.
T Consensus       415 ~~~~  418 (429)
T 3kvw_A          415 RLPK  418 (429)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            6554

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=7e-37  Score=264.44  Aligned_cols=172  Identities=29%  Similarity=0.491  Sum_probs=139.3

Q ss_pred             Cccc-ccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC--CcEEEeccCCcccCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA--PRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~--~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++ +++|.+++..++         ++.+++.++.|||++||+||||||+|||++.++.  ..+||+|||+++......
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~  173 (361)
T 2yab_A           94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV  173 (361)
T ss_dssp             EECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC
Confidence            7888 459999886543         4778999999999999999999999999976652  259999999998665555


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  146 (265)
                      .....+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+......    +..+....+.++  .+..++..
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~~ll~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~  248 (361)
T 2yab_A          174 EFKNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGDTKQET----LANITAVSYDFDEEFFSQTSEL  248 (361)
T ss_dssp             CCCCCCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTTCCCCCHHHHTTSCHH
T ss_pred             ccccCCCCccEECchHHcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCCCCchhccCCCHH
Confidence            55667899999999999887765 559999999999999999999988654333    233333333332  23468999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +++||.+||..||.+|||+.++++||||+..
T Consensus       249 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          249 AKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            9999999999999999999999999999854

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9.8e-37  Score=262.81  Aligned_cols=168  Identities=30%  Similarity=0.469  Sum_probs=134.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus       103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~--ikL~DFG~a~~~~~~~~~  180 (353)
T 3txo_A          103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH--CKLADFGMCKEGICNGVT  180 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCC----
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCC--EEEccccceeecccCCcc
Confidence            788876 9998887654         3677899999999999999999999999988776  99999999975332 233


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+......    ...+.......|.  .++..+.+
T Consensus       181 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~~~~p~--~~~~~~~~  253 (353)
T 3txo_A          181 TATFCGTPDYIAPEILQEMLYG-PAVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDEVVYPT--WLHEDATG  253 (353)
T ss_dssp             -----CCGGGCCHHHHHHHHCT-THHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCT--TSCHHHHH
T ss_pred             ccccCCCcCeEChhhcCCCCcC-CccCCCcchHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCC--CCCHHHHH
Confidence            3456799999999999887775 559999999999999999999987654333    3333444444443  58999999


Q ss_pred             HHHHhcccCCCCCCCH------HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI------KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~------~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||++      .++++||||+..
T Consensus       254 li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          254 ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            9999999999999998      899999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.6e-36  Score=254.15  Aligned_cols=174  Identities=22%  Similarity=0.326  Sum_probs=132.9

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.++|.+++...          .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  156 (288)
T 1ob3_A           79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE--LKIADFGLARAFGIPVRK  156 (288)
T ss_dssp             EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCTTHHHHHCC----
T ss_pred             EEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC--EEEeECccccccCccccc
Confidence            688888888887753          24778999999999999999999999999988775  999999998754322 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc-------CC----
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-------IP----  138 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~----  138 (265)
                      .....+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+....................       .+    
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence            2345689999999999875544567999999999999999999998876555444443322111000       00    


Q ss_pred             ------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          139 ------------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       139 ------------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                  ....+++.+.+||.+||..||.+|||+.++++||||++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                        11247899999999999999999999999999999975

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=5.5e-36  Score=251.35  Aligned_cols=176  Identities=22%  Similarity=0.301  Sum_probs=134.1

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.++|.+++...          .++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        80 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE--LKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCSCCSC
T ss_pred             EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeecccceecCCcccc
Confidence            788888887776542          24778999999999999999999999999988776  999999999755432 23


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-c------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-K------------  136 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~------------  136 (265)
                      .....+|+.|+|||++.+....+.++|||||||++|+|++|..||............+........ .            
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence            344578999999999988765566799999999999999988886555444333222222111000 0            


Q ss_pred             -----------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          137 -----------IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       137 -----------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                                 ......++..+++||.+||..||.+|||+.++++||||+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence                       001124788999999999999999999999999999998653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1e-36  Score=271.64  Aligned_cols=175  Identities=26%  Similarity=0.353  Sum_probs=132.1

Q ss_pred             CcccccchHHHHH-------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVM-------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~-------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+.+.       .+.++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...........
T Consensus       146 ~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~~~~~  223 (464)
T 3ttj_A          146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPY  223 (464)
T ss_dssp             EECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCCCC-----CCCC---
T ss_pred             EeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCC--EEEEEEEeeeecCCCcccCCC
Confidence            7888888777654       3345788999999999999999999999999998776  999999999866555455667


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc---------------ccCC
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ---------------YKIP  138 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---------------~~~~  138 (265)
                      +||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+..++..+....               ...+
T Consensus       224 ~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~  302 (464)
T 3ttj_A          224 VVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP  302 (464)
T ss_dssp             -CCCTTCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSC
T ss_pred             cccccccCHHHHcCCCCC-HHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhccc
Confidence            899999999999988776 459999999999999999999998776555555443321100               0001


Q ss_pred             CCCC---------------------CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          139 DYVH---------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       139 ~~~~---------------------~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ....                     .++++++||.+||..||.+|||+.++|+||||+...
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~  363 (464)
T 3ttj_A          303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  363 (464)
T ss_dssp             CCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             ccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence            0000                     146789999999999999999999999999998644

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=7.7e-37  Score=267.73  Aligned_cols=176  Identities=32%  Similarity=0.533  Sum_probs=131.4

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..++           ++.+++.+|.|||++||+||||||+|||++... .+.+||+|||+++.....
T Consensus       138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  217 (400)
T ss_dssp             EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence            788865 9999987543           367789999999999999999999999998632 245999999999865544


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  145 (265)
                      ......+||+.|+|||++.+..++ .++|||||||++|+|++|+.||...............+....+.  .+.+..++.
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  296 (400)
T 1nxk_A          218 NSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  296 (400)
T ss_dssp             ---------CTTCCGGGSCCCCSS-SHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             CccccCCCCCCccCHhhcCCCCCC-CcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCH
Confidence            445566899999999999887775 55999999999999999999998754322111112222233333  334457899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++++||.+||..||.+|||+.++++||||.+.
T Consensus       297 ~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999999999999753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-36  Score=255.88  Aligned_cols=165  Identities=23%  Similarity=0.263  Sum_probs=129.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+++++|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus       136 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kl~DFG~a~~~~~~~~~  213 (311)
T 3p1a_A          136 TELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR--CKLGDFGLLVELGTAGAG  213 (311)
T ss_dssp             EECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGC--EEECCCTTCEECC-----
T ss_pred             EeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC--EEEccceeeeecccCCCC
Confidence            7899999999887654          3678899999999999999999999999988776  999999998766555455


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....||+.|+|||++.+ .+ +.++|||||||++|+|++|..||....   ..    ..+............+++.+.+|
T Consensus       214 ~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~el~~g~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~l~~l  284 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQG-SY-GTAADVFSLGLTILEVACNMELPHGGE---GW----QQLRQGYLPPEFTAGLSSELRSV  284 (311)
T ss_dssp             -CCCCCGGGCCGGGGGT-CC-STHHHHHHHHHHHHHHHHTCCCCSSHH---HH----HHHTTTCCCHHHHTTSCHHHHHH
T ss_pred             cccCCCccccCHhHhcC-CC-CchhhHHHHHHHHHHHHhCCCCCCCcc---HH----HHHhccCCCcccccCCCHHHHHH
Confidence            55679999999999876 44 456999999999999999977765421   11    11111111111223578999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      |.+||..||.+|||+.++++||||++
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999975

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.8e-36  Score=264.96  Aligned_cols=175  Identities=25%  Similarity=0.298  Sum_probs=137.9

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEc-CCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+++.+.+..             +.++.+++.+|.|||++||+||||||+|||++ .++  .+||+|||+++....
T Consensus       117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~--~~kL~DFG~a~~~~~  194 (394)
T 4e7w_A          117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG--VLKLIDFGSAKILIA  194 (394)
T ss_dssp             EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT--EEEECCCTTCEECCT
T ss_pred             eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCC--cEEEeeCCCcccccC
Confidence            68888876655442             23467899999999999999999999999998 455  499999999987655


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh----------c--
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV----------Q--  134 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------~--  134 (265)
                      ........+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..++......          .  
T Consensus       195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~  274 (394)
T 4e7w_A          195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM  274 (394)
T ss_dssp             TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred             CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence            5555667899999999999876545567999999999999999999999877665555554422110          0  


Q ss_pred             -ccCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 -YKIP----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 -~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                       ...+          ....+++++.+||.+||..||.+|||+.++++||||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence             0111          112478899999999999999999999999999999854

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=7.3e-36  Score=257.34  Aligned_cols=168  Identities=32%  Similarity=0.518  Sum_probs=137.2

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus       100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~  177 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDGVT  177 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCc--EEEEeCCcccccccCCcc
Confidence            788865 9999988654         3677899999999999999999999999988776  99999999975332 233


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..+. .++|+|||||++|+|++|+.||.+.....    ....+.......|  ..++.++++
T Consensus       178 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~  250 (353)
T 2i0e_A          178 TKTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQSIMEHNVAYP--KSMSKEAVA  250 (353)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBS-THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHH
T ss_pred             cccccCCccccChhhhcCCCcC-CcccccchHHHHHHHHcCCCCCCCCCHHH----HHHHHHhCCCCCC--CCCCHHHHH
Confidence            4456799999999999887775 55999999999999999999998765433    3333344444444  368999999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||+     +.++++||||+..
T Consensus       251 li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          251 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             HHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            999999999999995     6999999999753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.5e-36  Score=266.06  Aligned_cols=175  Identities=26%  Similarity=0.336  Sum_probs=137.5

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.++|.+++..             ..++.+++.+|.|||++||+||||||+|||++.++. .+||+|||+++.....
T Consensus       132 ~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~-~~kl~DFG~a~~~~~~  210 (420)
T 1j1b_A          132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRG  210 (420)
T ss_dssp             EECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTT-EEEECCCTTCEECCTT
T ss_pred             hhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCC-eEEeccchhhhhcccC
Confidence            67888877766542             234678999999999999999999999999986532 4899999999866555


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------c
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------Q  134 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------~  134 (265)
                      ......++|+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..++..+...             .
T Consensus       211 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~  290 (420)
T 1j1b_A          211 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE  290 (420)
T ss_dssp             CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC
T ss_pred             CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence            555567899999999999876444566999999999999999999999877666555554432110             0


Q ss_pred             ccCCC----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      +.++.          ...+++++++||.+||..||.+|||+.++++||||..
T Consensus       291 ~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          291 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             CCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             hccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence            11111          1246889999999999999999999999999999964

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=4.2e-36  Score=267.97  Aligned_cols=171  Identities=35%  Similarity=0.591  Sum_probs=141.8

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++..++         ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus        95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~--vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCC--EEECCCSSCEECCTTCCB
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCC--eEEEeccchhhccccccc
Confidence            78884 59998876443         4778999999999999999999999999988776  999999999866555555


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..+.+.++|||||||++|+|++|+.||........+    ..+....+..|  ..+++.+.+|
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~----~~i~~~~~~~p--~~~s~~~~~L  246 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF----KKICDGIFYTP--QYLNPSVISL  246 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHH----HHHHTTCCCCC--TTCCHHHHHH
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHH----HHHhcCCcCCC--ccCCHHHHHH
Confidence            56789999999999998877677799999999999999999999876654333    33333333333  3689999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..||.+|||+.++++||||++..+
T Consensus       247 i~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          247 LKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             HHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            99999999999999999999999987554

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-35  Score=252.55  Aligned_cols=167  Identities=34%  Similarity=0.541  Sum_probs=137.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ..
T Consensus        85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--~kL~Dfg~a~~~~~--~~  160 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH--IKITDFGFAKYVPD--VT  160 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC--EEECCCSSCEECSS--CB
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCC--EEEeecCcceecCC--cc
Confidence            788865 9999987654         3677899999999999999999999999988776  99999999975432  23


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..++ .++|+|||||++|+|++|+.||........    ...+.......|  ..++.++++|
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~p--~~~~~~~~~l  233 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKT----YEKILNAELRFP--PFFNEDVKDL  233 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBC-TTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHCCCCCC--TTSCHHHHHH
T ss_pred             ccccCCccccCHhHhcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCC--CCCCHHHHHH
Confidence            456799999999999887775 459999999999999999999987654333    333333444444  3689999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKNL  178 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~~  178 (265)
                      |.+||..||.+||     ++.++++||||+...
T Consensus       234 i~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence            9999999999999     999999999998643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=4.6e-36  Score=257.78  Aligned_cols=168  Identities=33%  Similarity=0.532  Sum_probs=137.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~  174 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGDAK  174 (345)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCC--EEEeEChhhhhcccCCCc
Confidence            788854 9999987644         3677899999999999999999999999988775  99999999975432 223


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..++ .++|+|||||++|+|++|+.||.+......    ...+.......|  ..++..+++
T Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p--~~~s~~~~~  247 (345)
T 1xjd_A          175 TNTFCGTPDYIAPEILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----FHSIRMDNPFYP--RWLEKEAKD  247 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCC--TTSCHHHHH
T ss_pred             ccCCCCCcccCChhhhcCCCCC-ChhhhHHHHHHHHHHhcCCCCCCCCCHHHH----HHHHHhCCCCCC--cccCHHHHH
Confidence            4456799999999999887775 559999999999999999999987654332    233333333333  358999999


Q ss_pred             HHHHhcccCCCCCCCHH-HHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIK-EIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~-ell~h~~f~~~  177 (265)
                      ||.+||..||.+||++. ++++||||+..
T Consensus       248 li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          248 LLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence            99999999999999998 99999999754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.3e-36  Score=259.61  Aligned_cols=174  Identities=24%  Similarity=0.289  Sum_probs=137.4

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++++|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ....
T Consensus       109 ~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~--~~~~  184 (367)
T 1cm8_A          109 MPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQADS--EMTG  184 (367)
T ss_dssp             EECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCS--SCCS
T ss_pred             EecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCC--EEEEeeeccccccc--ccCc
Confidence            6888889999887533        4778999999999999999999999999988775  99999999975432  3345


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc------------------
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ------------------  134 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------------  134 (265)
                      ..+|+.|+|||++.+....+.++||||+||++|+|++|+.||.+......+..+........                  
T Consensus       185 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  264 (367)
T 1cm8_A          185 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG  264 (367)
T ss_dssp             SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHH
T ss_pred             CcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHh
Confidence            67899999999998744345669999999999999999999988766555444433211100                  


Q ss_pred             -ccC------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          135 -YKI------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       135 -~~~------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                       ...      ..+..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             SCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence             000      01235689999999999999999999999999999997643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1e-35  Score=263.69  Aligned_cols=171  Identities=31%  Similarity=0.587  Sum_probs=137.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCC-CCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++..+.         ++.+++.++.|||++||+||||||+|||++.. ..+.+||+|||+++...... 
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~  168 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ  168 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence            788866 9999887654         47789999999999999999999999999853 22459999999997554332 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  146 (265)
                      ......||+.|+|||++.+..++ .++|||||||++|+|++|..||.+......+    ..+.....  ..+.+..+++.
T Consensus       169 ~~~~~~gt~~Y~APE~l~~~~~~-~~~DIwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~  243 (444)
T 3soa_A          169 AWFGFAGTPGYLSPEVLRKDPYG-KPVDLWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFPSPEWDTVTPE  243 (444)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHTCCCCCTTTTTTSCHH
T ss_pred             eeecccCCcccCCHHHhcCCCCC-CccccHHHHHHHHHHHhCCCCCCCccHHHHH----HHHHhCCCCCCccccccCCHH
Confidence            22446799999999999887775 5599999999999999999999876543332    33333333  33445578999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      +++||.+||..||.+|||+.++++||||+.
T Consensus       244 ~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          244 AKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            999999999999999999999999999963

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.5e-36  Score=255.20  Aligned_cols=175  Identities=21%  Similarity=0.313  Sum_probs=132.4

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.++|.+++...+          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...... .
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~  156 (324)
T 3mtl_A           79 FEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKT  156 (324)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCC--EEECSSSEEECC------
T ss_pred             ecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCC--EEEccCcccccccCCccc
Confidence            7899999999887643          3678899999999999999999999999988775  9999999987543222 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--------------  135 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------  135 (265)
                      .....+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.........+.........              
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT  236 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence            234568999999999987554556799999999999999999999887655544443332211100              


Q ss_pred             -cCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 -KIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 -~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                       ..+         ....+++++.+||.+||..||.+|||+.++++||||...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence             000         112468899999999999999999999999999999754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.4e-35  Score=254.90  Aligned_cols=172  Identities=27%  Similarity=0.430  Sum_probs=135.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.... ...
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--~kL~DFG~a~~~~~~~~~  166 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDT  166 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCGGGCBCSCCTTCC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC--EEEEeccccccccCCCCc
Confidence            788855 9998887654         3677899999999999999999999999988775  99999999975332 233


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP-----KNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ....+||+.|+|||++.+..+. .++|+|||||++|+|++|+.||......     .........+.......|  ..++
T Consensus       167 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~~~s  243 (345)
T 3a8x_A          167 TSTFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSLS  243 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC--TTSC
T ss_pred             ccccCCCccccCccccCCCCCC-hHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC--CCCC
Confidence            4456799999999999887775 5599999999999999999999753221     111222333333444444  3689


Q ss_pred             HHHHHHHHHhcccCCCCCCCH------HHHhcCcccCCC
Q 024572          145 QDCRNLLSRIFVANPSRRITI------KEIKSHPWFLKN  177 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~------~ell~h~~f~~~  177 (265)
                      ..+++||.+||..||.+||++      .++++||||+..
T Consensus       244 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            999999999999999999995      899999999753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.3e-36  Score=256.14  Aligned_cols=173  Identities=31%  Similarity=0.530  Sum_probs=138.0

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC--CCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP--APRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~--~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++  ...+||+|||+++......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~  172 (326)
T 2y0a_A           93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN  172 (326)
T ss_dssp             EECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS
T ss_pred             EEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC
Confidence            68885 59999886543         477889999999999999999999999998765  2259999999998665444


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  146 (265)
                      ......||+.|+|||++.+..++ .++|||||||++|+|++|..||.+......+.    .+.......+  .+..++..
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  247 (326)
T 2y0a_A          173 EFKNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGDTKQETLA----NVSAVNYEFEDEYFSNTSAL  247 (326)
T ss_dssp             CCCCCCSCTTTCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH----HHHHTCCCCCHHHHTTSCHH
T ss_pred             ccccccCCcCcCCceeecCCCCC-cHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH----HHHhcCCCcCccccccCCHH
Confidence            55566799999999999877765 55999999999999999999998765433322    2222222222  22467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      +.+||.+||..||.+|||+.++++||||+...
T Consensus       248 ~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            99999999999999999999999999998654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=5.7e-36  Score=262.60  Aligned_cols=173  Identities=32%  Similarity=0.445  Sum_probs=139.1

Q ss_pred             Cccc-ccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--C
Q 024572            1 MQLG-VSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--R   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--~   69 (265)
                      ||++ +++|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+|+......  .
T Consensus       148 ~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~--ikL~DFG~a~~~~~~~~~~  225 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNKEGMVR  225 (410)
T ss_dssp             ECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSEEE
T ss_pred             EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCC--EEEeccceeEeeccCCccc
Confidence            7888 459999886543        3677899999999999999999999999988776  9999999997554332  2


Q ss_pred             CCCCcCCCCCcccccccCCcC---CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREY---DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~---~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ....+||+.|+|||++.+...   .+.++|||||||++|+|++|+.||.+......+..++...  .....|....++..
T Consensus       226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~p~~~~~s~~  303 (410)
T 3v8s_A          226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK--NSLTFPDDNDISKE  303 (410)
T ss_dssp             CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH--HHCCCCTTCCCCHH
T ss_pred             ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc--ccccCCCcccccHH
Confidence            335679999999999986541   3456999999999999999999998866544444433321  22445555679999


Q ss_pred             HHHHHHHhcccCCCC--CCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSR--RITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~  177 (265)
                      +++||.+||..+|.+  |+++.+|++||||+..
T Consensus       304 ~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          304 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            999999999999988  9999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.1e-36  Score=259.23  Aligned_cols=171  Identities=30%  Similarity=0.566  Sum_probs=138.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-CcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++. ..+||+|||+++.......
T Consensus       107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~  186 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA  186 (362)
T ss_dssp             ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence            788866 8988876543         3678999999999999999999999999976532 3599999999986655544


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  147 (265)
                      .....||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.....    ....+....+..  +.+..+++.+
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~  261 (362)
T 2bdw_A          187 WHGFAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHR----LYAQIKAGAYDYPSPEWDTVTPEA  261 (362)
T ss_dssp             CCCSCSCTTTCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHTCCCCCTTGGGGSCHHH
T ss_pred             cccCCCCccccCHHHHccCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhCCCCCCcccccCCCHHH
Confidence            5566899999999999887765 55999999999999999999998765432    223333333333  3345689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++||.+||..||.+|||+.++++||||..
T Consensus       262 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          262 KSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            99999999999999999999999999964

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-37  Score=261.01  Aligned_cols=172  Identities=24%  Similarity=0.413  Sum_probs=138.2

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+|||++....+.+||+|||+++.......
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~  159 (321)
T 1tki_A           80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence            788875 9999886543          36788999999999999999999999999874445699999999986554444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  147 (265)
                      .....+|+.|+|||++.+..++ .++|||||||++|+|++|..||.........    ..+.......+  .+..++.++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  234 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQHDVVS-TATDMWSLGTLVYVLLSGINPFLAETNQQII----ENIMNAEYTFDEEAFKEISIEA  234 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEEC-HHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHTCCCCCHHHHTTSCHHH
T ss_pred             cccccCChhhcCcHHhcCCCCC-chhhHHHHHHHHHHHHhCCCCCcCCCHHHHH----HHHHcCCCCCChhhhccCCHHH
Confidence            4455799999999999887664 5699999999999999999999876543332    33333333322  234689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+||.+||..||.+|||+.++++||||++.
T Consensus       235 ~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          235 MDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            999999999999999999999999999765

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.2e-36  Score=260.13  Aligned_cols=174  Identities=23%  Similarity=0.309  Sum_probs=138.9

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.++|.+.+..             ..++.+++.+|.|||++||+||||||+|||++. ++  .+||+|||+++....
T Consensus       117 ~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~--~~kl~Dfg~a~~~~~  194 (383)
T 3eb0_A          117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN--TLKLCDFGSAKKLIP  194 (383)
T ss_dssp             ECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTT--EEEECCCTTCEECCT
T ss_pred             EecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCC--cEEEEECCCCcccCC
Confidence            78999988877763             224678999999999999999999999999974 44  499999999986655


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------  133 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------  133 (265)
                      ........+|+.|+|||++.+....+.++||||+||++|+|++|+.||.+......+..++......             
T Consensus       195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~  274 (383)
T 3eb0_A          195 SEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYT  274 (383)
T ss_dssp             TSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC-
T ss_pred             CCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccc
Confidence            5555667899999999999876644567999999999999999999999877666555554322110             


Q ss_pred             cccCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          134 QYKIP----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       134 ~~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ....+          .+..+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          275 EVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             -CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             cccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            00111          12247889999999999999999999999999999964

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.5e-35  Score=263.84  Aligned_cols=177  Identities=25%  Similarity=0.309  Sum_probs=127.3

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      ||+++++|.+++....         ++.+|+.+|.|||++|||||||||+|||++.++.  +||+|||+++......   
T Consensus       136 ~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~--~kl~DFGla~~~~~~~~~~  213 (458)
T 3rp9_A          136 LEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS--VKVCDFGLARTVDYPENGN  213 (458)
T ss_dssp             ECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC--EEECCCTTCBCTTSCTTCC
T ss_pred             EeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCC--EeecccccchhccCccccc
Confidence            7899999999887543         4778999999999999999999999999988776  9999999997543221   


Q ss_pred             -------------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-----------CCC
Q 024572           69 -------------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-----------GAY  112 (265)
Q Consensus        69 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-----------g~~  112 (265)
                                               .....+||+.|+|||++......+.++|||||||++|+|++           |++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p  293 (458)
T 3rp9_A          214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGP  293 (458)
T ss_dssp             CCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCC
T ss_pred             cccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccc
Confidence                                     12334689999999987554444566999999999999998           677


Q ss_pred             CCCCCCC--------------------hHHHHHHHHHHhhh----------------cccC---------CCCCCCCHHH
Q 024572          113 PFEDQED--------------------PKNFRKTISRIMAV----------------QYKI---------PDYVHISQDC  147 (265)
Q Consensus       113 pf~~~~~--------------------~~~~~~~~~~~~~~----------------~~~~---------~~~~~~~~~~  147 (265)
                      +|.+...                    ...+..+...+...                ....         ..+..+++++
T Consensus       294 ~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  373 (458)
T 3rp9_A          294 LFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADA  373 (458)
T ss_dssp             SCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHH
T ss_pred             cCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHH
Confidence            7765431                    01111111100000                0000         0123568999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      .+||.+||..||.+|||+.++|+||||+....
T Consensus       374 ~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          374 IHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             HHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence            99999999999999999999999999986543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.4e-37  Score=268.29  Aligned_cols=171  Identities=14%  Similarity=0.153  Sum_probs=133.4

Q ss_pred             CcccccchHHHHHHh----------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVSSLSEFVMLE----------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.++|.+++..+                .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus       167 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DFG~a~~~  244 (371)
T 3q60_A          167 MPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR--LMLGDVSALWKV  244 (371)
T ss_dssp             ECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSC--EEECCGGGEEET
T ss_pred             ecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCC--EEEEecceeeec
Confidence            789999999999863                33478999999999999999999999999988775  999999999754


Q ss_pred             CCCCCCCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH--HHH-HHHHHhhhcccCCC
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN--FRK-TISRIMAVQYKIPD  139 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~  139 (265)
                      ..  ......+|+.|+|||++.+  ..+ +.++|||||||++|+|++|+.||........  +.. ............+.
T Consensus       245 ~~--~~~~~~~t~~y~aPE~~~~~~~~~-~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (371)
T 3q60_A          245 GT--RGPASSVPVTYAPREFLNASTATF-THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGS  321 (371)
T ss_dssp             TC--EEEGGGSCGGGCCHHHHTCSEEEC-CHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTT
T ss_pred             CC--CccCccCCcCCcChhhccCCCCCc-CccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhh
Confidence            32  1224557799999999976  455 4669999999999999999999987632210  000 00000112233444


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ...+++.+.+||.+||..||.+|||+.++++||||++
T Consensus       322 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          322 CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            4578999999999999999999999999999999964

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.9e-36  Score=256.04  Aligned_cols=177  Identities=24%  Similarity=0.328  Sum_probs=131.7

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC---CCcEEEeccCCcccCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP---APRLKICDFGYSKSSLLH-   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~---~~~vkl~Dfg~a~~~~~~-   67 (265)
                      ||++.++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++   .+.+||+|||+++..... 
T Consensus       112 ~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~  191 (329)
T 3gbz_A          112 FEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI  191 (329)
T ss_dssp             EECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---
T ss_pred             EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc
Confidence            7899999999987653         467889999999999999999999999995322   234999999998754322 


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc-------CCCC
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-------IPDY  140 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~  140 (265)
                      .......+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.........+..........       .+.+
T Consensus       192 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (329)
T 3gbz_A          192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDW  271 (329)
T ss_dssp             --------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhh
Confidence            223345689999999999876645667999999999999999999998876655554444332111100       0000


Q ss_pred             -----------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          141 -----------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       141 -----------------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                       ..++..+.+||.+||..||.+|||+.++++||||+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          272 KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             CTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             hhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence                             0167899999999999999999999999999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.7e-35  Score=254.89  Aligned_cols=166  Identities=28%  Similarity=0.481  Sum_probs=136.8

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ..
T Consensus       120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--~kL~DFg~a~~~~~--~~  195 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKG--RT  195 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSS--CB
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCC--EEEcccccceeccC--Cc
Confidence            78885 59999988654         3677899999999999999999999999988776  99999999975433  23


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.......    ....+.......|  ..++..+.+|
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~~~~~~~l  268 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQ----IYEKIVSGKVRFP--SHFSSDLKDL  268 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTCCHHHHHH
T ss_pred             ccccCCccccCHHHhcCCCCC-CcCCEecccHhHhHHhhCCCCCCCCCHHH----HHHHHHcCCCCCC--CCCCHHHHHH
Confidence            456799999999999887775 55999999999999999999998765433    2333333444444  3689999999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      |.+||..||.+||+     +.++++||||+..
T Consensus       269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            99999999999998     9999999999753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.7e-35  Score=254.61  Aligned_cols=176  Identities=20%  Similarity=0.306  Sum_probs=134.2

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC----
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL----   66 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~----   66 (265)
                      ||++.++|.+.+...          .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....    
T Consensus       103 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~  180 (351)
T 3mi9_A          103 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNS  180 (351)
T ss_dssp             EECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCCCSSS
T ss_pred             EeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCC--EEEccchhcccccccccc
Confidence            688888888777643          34778999999999999999999999999988775  99999999875432    


Q ss_pred             -CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc-CCCCC---
Q 024572           67 -HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-IPDYV---  141 (265)
Q Consensus        67 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~---  141 (265)
                       ........+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.........+.......... .+...   
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  260 (351)
T 3mi9_A          181 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYE  260 (351)
T ss_dssp             SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCG
T ss_pred             cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccch
Confidence             2222345689999999999875544567999999999999999999998876544443333221111100 00000   


Q ss_pred             ----------------------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          142 ----------------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       142 ----------------------~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                                            ..++.+.+||.+||..||.+|||+.++++||||+...
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          261 LYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             GGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             hhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence                                  0267799999999999999999999999999997543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=9.4e-36  Score=261.22  Aligned_cols=177  Identities=22%  Similarity=0.311  Sum_probs=126.0

Q ss_pred             CcccccchHHHHHH------------------hccccchHHHHHhhhhcCceecCCCcCcEEEcC--CCCCcEEEeccCC
Q 024572            1 MQLGVSSLSEFVML------------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDG--SPAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~~sL~~~~~~------------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~--~~~~~vkl~Dfg~   60 (265)
                      ||+++++|.+++..                  +.++.+++.+|.|||++||+||||||+|||+..  ...+.+||+|||+
T Consensus        99 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A           99 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             EECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             EeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            78899998888763                  334778999999999999999999999999932  1223599999999


Q ss_pred             cccCCCC----CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---------HHHHHHH
Q 024572           61 SKSSLLH----SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---------KNFRKTI  127 (265)
Q Consensus        61 a~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---------~~~~~~~  127 (265)
                      ++.....    ......+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+....         ..+..++
T Consensus       179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~  258 (405)
T 3rgf_A          179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF  258 (405)
T ss_dssp             CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHH
T ss_pred             ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHH
Confidence            9754332    22234578999999999988665567799999999999999999999765431         2222222


Q ss_pred             HHHhhhccc-------C-------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          128 SRIMAVQYK-------I-------------------------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       128 ~~~~~~~~~-------~-------------------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ..+......       .                         ......+..+.+||.+||..||.+|||+.++|+||||+
T Consensus       259 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~  338 (405)
T 3rgf_A          259 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL  338 (405)
T ss_dssp             HHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhc
Confidence            211100000       0                         00112367899999999999999999999999999997


Q ss_pred             CC
Q 024572          176 KN  177 (265)
Q Consensus       176 ~~  177 (265)
                      ..
T Consensus       339 ~~  340 (405)
T 3rgf_A          339 ED  340 (405)
T ss_dssp             SS
T ss_pred             cC
Confidence            64

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=252.06  Aligned_cols=171  Identities=25%  Similarity=0.391  Sum_probs=137.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~  171 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH--VHITDFNIAAMLPRETQI  171 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTCCB
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCC--EEEeccceeeeccCCCce
Confidence            678854 9998887653         3668899999999999999999999999988776  999999999866555555


Q ss_pred             CCCcCCCCCcccccccCC---cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 KSTVGTPAYIAPEVLSRR---EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ...+||+.|+|||++.+.   .+ +.++|||||||++|+|++|+.||....... .......+.......|  ..++..+
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~~~~~~~~~~p--~~~s~~~  247 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGY-SFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVHTFETTVVTYP--SAWSQEM  247 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCB-CTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-HHHHHHHHHHCCCCCC--TTSCHHH
T ss_pred             eccCCCccccCCeeeccCCCCCC-CccceeechHHHHHHHHhCCCCCCCCCCcc-HHHHHHHHhhcccCCC--CcCCHHH
Confidence            667899999999999742   34 455999999999999999999997654322 2233333333333333  4689999


Q ss_pred             HHHHHHhcccCCCCCCC-HHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRIT-IKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s-~~ell~h~~f~~~  177 (265)
                      .+||.+||..||.+||+ +.++++||||+..
T Consensus       248 ~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            99999999999999998 8999999999764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.1e-36  Score=252.26  Aligned_cols=169  Identities=35%  Similarity=0.497  Sum_probs=132.1

Q ss_pred             Cccccc-chHHHH--------HHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFV--------MLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~--------~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.++.        ....++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...... ..
T Consensus       117 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~  194 (298)
T 2zv2_A          117 FELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH--IKIADFGVSNEFKGSDALL  194 (298)
T ss_dssp             EECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECSSSSCEE
T ss_pred             EecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCC--EEEecCCCccccccccccc
Confidence            566653 554432        23335778999999999999999999999999988775  9999999997544322 22


Q ss_pred             CCCcCCCCCcccccccCCcC--CCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREY--DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ....||+.|+|||++.+...  .+.++|||||||++|+|++|+.||......    .....+.......+....+++.+.
T Consensus       195 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~  270 (298)
T 2zv2_A          195 SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM----CLHSKIKSQALEFPDQPDIAEDLK  270 (298)
T ss_dssp             CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHCCCCCCSSSCCCHHHH
T ss_pred             cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH----HHHHHHhcccCCCCCccccCHHHH
Confidence            34579999999999976542  356699999999999999999999775432    222333334445555567899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      +||.+||..||.+|||+.++++||||+
T Consensus       271 ~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          271 DLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            999999999999999999999999995

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.4e-36  Score=255.00  Aligned_cols=169  Identities=21%  Similarity=0.207  Sum_probs=119.9

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhc--------CceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQ--------QICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~--------~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      |||+.+ +|.+++..+.        +..+++.++.|||++        +||||||||+|||++.++.  +||+|||+|+.
T Consensus        80 ~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~--~Ki~DFGla~~  157 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSC--EEECCCTTCEE
T ss_pred             ecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCC--EEEEeCCCCcc
Confidence            799975 9999997654        356789999999987        9999999999999998876  99999999975


Q ss_pred             CCCCC-----CCCCCcCCCCCcccccccCCcC-----CCchHhHHHHHHHHHHHHhCCCCCCCCCC----------h-HH
Q 024572           64 SLLHS-----RPKSTVGTPAYIAPEVLSRREY-----DGKLADVWSCGVTLYVMLVGAYPFEDQED----------P-KN  122 (265)
Q Consensus        64 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~-----~~~~~DiwslG~~l~~ll~g~~pf~~~~~----------~-~~  122 (265)
                      .....     .....+||+.|||||++.+...     .+.++|||||||++|||+||+.||.....          . ..
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            43322     1233579999999999976421     23569999999999999999876643211          1 01


Q ss_pred             HHHHHHHHhhhcccCCCCC-----CCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          123 FRKTISRIMAVQYKIPDYV-----HISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .......+.....+.+.+.     ..+..+.+|+.+||..||++|||+.+|++.
T Consensus       238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            1222222222222211111     123468899999999999999999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=5.1e-36  Score=261.27  Aligned_cols=173  Identities=23%  Similarity=0.441  Sum_probs=138.3

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.+|.|||++||+||||||+|||++.+..+.+||+|||+++.......
T Consensus       127 ~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             EEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence            688755 8988876442          36788999999999999999999999999865555699999999986554444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  147 (265)
                      .....||+.|+|||++.+..+. .++|||||||++|+|++|..||.+......+    ..+......  ...+..+++.+
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  281 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDREPVG-FYTDMWAIGVLGYVLLSGLSPFAGEDDLETL----QNVKRCDWEFDEDAFSSVSPEA  281 (387)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBC-HHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHHCCCCCCSSTTTTSCHHH
T ss_pred             eeeeccCCCccCchhccCCCCC-CcccEeeHhHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCccccccCCHHH
Confidence            4455799999999999887764 5599999999999999999999876543332    222222222  23345689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ++||.+||..||.+|||+.++++||||+...
T Consensus       282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            9999999999999999999999999998653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=8.1e-36  Score=254.17  Aligned_cols=174  Identities=32%  Similarity=0.477  Sum_probs=138.0

Q ss_pred             Cccccc-chHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++.+ +|.+++...         .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.....   
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTEE
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCC--EEEEEeeccceeccCCcc
Confidence            678855 887776543         34778999999999999999999999999988775  999999999744322   


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ......+||+.|+|||++.+..+.+.++|||||||++|+|++|+.||...........   .........+.+..++..+
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  238 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAP  238 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH---HHHTTCTTSTTGGGSCHHH
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HHhcccccCCccccCCHHH
Confidence            2223557999999999998877766779999999999999999999987655432222   1222233334445689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      .+||.+||..||.+|||+.++++||||++...
T Consensus       239 ~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          239 LALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            99999999999999999999999999986543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-35  Score=252.62  Aligned_cols=175  Identities=25%  Similarity=0.312  Sum_probs=138.2

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.++|.+++..+.          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus        91 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~  168 (346)
T 1ua2_A           91 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRA  168 (346)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCGGGSTTTSCCCC
T ss_pred             EEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCC--EEEEecccceeccCCccc
Confidence            6888889888887543          3677899999999999999999999999988775  999999999765332 23


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cCCC---------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIPD---------  139 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~---------  139 (265)
                      .....+|+.|+|||++.+....+.++|||||||++|+|++|.+||.+......+..+......... .++.         
T Consensus       169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  248 (346)
T 1ua2_A          169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT  248 (346)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccc
Confidence            344578999999999977654566799999999999999999999887665555554443221110 0000         


Q ss_pred             ------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          140 ------------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       140 ------------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                  ...++..+++||.+||..||.+|||+.++++||||+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             ccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence                        13467899999999999999999999999999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.5e-35  Score=254.82  Aligned_cols=168  Identities=30%  Similarity=0.467  Sum_probs=137.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCC-CCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL-LHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~-~~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++... ....
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--ikL~DFG~a~~~~~~~~~  195 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--IVLTDFGLCKENIEHNST  195 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCCBCGGGBCCCCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC--EEEeeCccccccccCCCc
Confidence            788865 9999887654         3677899999999999999999999999988776  9999999997533 2334


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..++ .++|+|||||++|+|++|+.||.+......+    ..+.......+  ..++..+++
T Consensus       196 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~~~~~~~--~~~~~~~~~  268 (373)
T 2r5t_A          196 TSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY----DNILNKPLQLK--PNITNSARH  268 (373)
T ss_dssp             CCSBSCCCCCCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCTTCCSBHHHHH----HHHHHSCCCCC--SSSCHHHHH
T ss_pred             cccccCCccccCHHHhCCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHhcccCCC--CCCCHHHHH
Confidence            4566899999999999887765 5599999999999999999999876543333    33333333333  368999999


Q ss_pred             HHHHhcccCCCCCCCH----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~----~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||++    .++++||||+..
T Consensus       269 li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             HHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence            9999999999999986    699999999754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2e-35  Score=255.67  Aligned_cols=177  Identities=24%  Similarity=0.333  Sum_probs=138.7

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC----
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS----   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~----   68 (265)
                      ||+++++|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......    
T Consensus       109 ~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~~  186 (364)
T 3qyz_A          109 QDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTG  186 (364)
T ss_dssp             EECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCGGGCBCC
T ss_pred             EcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCC--EEEEeCcceEecCCCCCccc
Confidence            6888899998876543        4778999999999999999999999999988776  9999999997543322    


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--------------  134 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--------------  134 (265)
                      .....+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..+........              
T Consensus       187 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  266 (364)
T 3qyz_A          187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN  266 (364)
T ss_dssp             TTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred             cccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHH
Confidence            123457999999999987655445679999999999999999999988776655554433211100              


Q ss_pred             --ccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          135 --YKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       135 --~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                        ...+         ....++..+.+||.+||..||.+|||+.++++||||++...
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence              0001         01357899999999999999999999999999999987644

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.7e-35  Score=260.53  Aligned_cols=168  Identities=32%  Similarity=0.508  Sum_probs=135.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~   68 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||+ +||+||||||+|||++.++.  +||+|||+++.... ..
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~  304 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH--IKITDFGLCKEGIKDGA  304 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSC--EEECCCCCCCTTCC---
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCC--EEEccCCCceeccCCCc
Confidence            788866 8988887654         36778999999998 99999999999999988775  99999999975332 23


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      .....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......    ...+.......|  ..+++.+.
T Consensus       305 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p--~~~~~~~~  377 (446)
T 4ejn_A          305 TMKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILMEEIRFP--RTLGPEAK  377 (446)
T ss_dssp             --CCSSSCGGGCCHHHHHTSCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCC--TTSCHHHH
T ss_pred             ccccccCCccccCHhhcCCCCCC-CccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHHhCCCCCC--ccCCHHHH
Confidence            34456799999999999887775 559999999999999999999987654332    223333333333  36899999


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      +||.+||..||.+||     ++.++++||||+..
T Consensus       378 ~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999999999     99999999999764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=6.4e-36  Score=259.60  Aligned_cols=172  Identities=28%  Similarity=0.474  Sum_probs=137.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.+|.|||++||+||||||+|||+..+..+.+||+|||+++.......
T Consensus       165 ~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~  244 (373)
T 2x4f_A          165 MEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK  244 (373)
T ss_dssp             EECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred             EeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence            788864 8988886543          36689999999999999999999999999544444699999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+..+.    ......+  .+..+++.+
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~  319 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVS-FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL----ACRWDLEDEEFQDISEEA  319 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCC-HHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH----HTCCCSCSGGGTTSCHHH
T ss_pred             cccccCCCcEeChhhccCCCCC-cHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hccCCCChhhhccCCHHH
Confidence            5556799999999999876654 56999999999999999999998876544333332    2222222  234689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||.+|||+.++++||||+..
T Consensus       320 ~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          320 KEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            999999999999999999999999999753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=7.5e-36  Score=257.63  Aligned_cols=172  Identities=24%  Similarity=0.300  Sum_probs=131.5

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCC---------------------
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS---------------------   48 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~---------------------   48 (265)
                      ||+++++|.+++..+.           ++.+++.+|.|||++||+||||||+|||++..                     
T Consensus       115 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  194 (360)
T 3llt_A          115 FEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY  194 (360)
T ss_dssp             ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEE
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccccc
Confidence            7899889999998654           36778999999999999999999999999751                     


Q ss_pred             --CCCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Q 024572           49 --PAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKT  126 (265)
Q Consensus        49 --~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~  126 (265)
                        ..+.+||+|||+++....  ......||+.|+|||++.+..++. ++|||||||++|+|++|+.||........+..+
T Consensus       195 ~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  271 (360)
T 3llt_A          195 RTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDV-SSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM  271 (360)
T ss_dssp             EESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCT-THHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             ccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCC-ccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence              134599999999975332  334567999999999999887754 599999999999999999999876554433322


Q ss_pred             HHHHhhh----------------------cccCCCC------------------CCCCHHHHHHHHHhcccCCCCCCCHH
Q 024572          127 ISRIMAV----------------------QYKIPDY------------------VHISQDCRNLLSRIFVANPSRRITIK  166 (265)
Q Consensus       127 ~~~~~~~----------------------~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~R~s~~  166 (265)
                      .......                      ...+|..                  ...++.+.+||.+||..||.+|||+.
T Consensus       272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~  351 (360)
T 3llt_A          272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA  351 (360)
T ss_dssp             HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence            2111000                      0000100                  01236788999999999999999999


Q ss_pred             HHhcCcccC
Q 024572          167 EIKSHPWFL  175 (265)
Q Consensus       167 ell~h~~f~  175 (265)
                      ++|+||||+
T Consensus       352 elL~hp~f~  360 (360)
T 3llt_A          352 ELLKHKFLE  360 (360)
T ss_dssp             HHTTSGGGC
T ss_pred             HHhcCcccC
Confidence            999999995

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=9.6e-36  Score=257.96  Aligned_cols=175  Identities=22%  Similarity=0.302  Sum_probs=123.8

Q ss_pred             CcccccchHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++++|.+++...        .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....  ....
T Consensus       113 ~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~--~kL~DFG~a~~~~~--~~~~  188 (367)
T 2fst_X          113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTAD--EMTG  188 (367)
T ss_dssp             EECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECC---------------
T ss_pred             ecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCC--EEEeeccccccccc--cCCC
Confidence            577778888877543        34778999999999999999999999999988775  99999999975432  2345


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc------------------
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ------------------  134 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------------  134 (265)
                      ..+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..+...+....                  
T Consensus       189 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  268 (367)
T 2fst_X          189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS  268 (367)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHT
T ss_pred             cCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhc
Confidence            67999999999998744445669999999999999999999988766555444433211100                  


Q ss_pred             -ccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          135 -YKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       135 -~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                       ...+      ....+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             SCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             cCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence             0001      01246889999999999999999999999999999986543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.3e-35  Score=259.09  Aligned_cols=178  Identities=27%  Similarity=0.318  Sum_probs=128.4

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      ||+++++|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......   
T Consensus       109 ~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~--~kL~DFGla~~~~~~~~~~  186 (432)
T 3n9x_A          109 LEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCS--VKVCDFGLARTINSEKDTN  186 (432)
T ss_dssp             EECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEEC-------
T ss_pred             EecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCC--EEEccCCCccccccccccc
Confidence            7899999999887643         4778999999999999999999999999988775  9999999997543321   


Q ss_pred             --------------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhC-----------CCCCCCC
Q 024572           69 --------------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG-----------AYPFEDQ  117 (265)
Q Consensus        69 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g-----------~~pf~~~  117 (265)
                                          .....+||+.|+|||++......+.++|||||||++|+|++|           .++|.+.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~  266 (432)
T 3n9x_A          187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGS  266 (432)
T ss_dssp             ------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCS
T ss_pred             ccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCc
Confidence                                124567999999999975555446679999999999999984           3444332


Q ss_pred             CC-----------------hHHHHHHHHHH--------------------hhhcccCC-----CCCCCCHHHHHHHHHhc
Q 024572          118 ED-----------------PKNFRKTISRI--------------------MAVQYKIP-----DYVHISQDCRNLLSRIF  155 (265)
Q Consensus       118 ~~-----------------~~~~~~~~~~~--------------------~~~~~~~~-----~~~~~~~~~~~li~~~L  155 (265)
                      ..                 ...+..++..+                    .......+     .+..+++.+.+||.+||
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL  346 (432)
T 3n9x_A          267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESML  346 (432)
T ss_dssp             CSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHS
T ss_pred             cccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHh
Confidence            21                 11111111100                    00000001     11357999999999999


Q ss_pred             ccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          156 VANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       156 ~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ..||.+|||+.++|+||||+.....
T Consensus       347 ~~dP~~R~ta~e~L~Hp~f~~~~~~  371 (432)
T 3n9x_A          347 KFNPNKRITIDQALDHPYLKDVRKK  371 (432)
T ss_dssp             CSSTTTSCCHHHHHTCGGGTTTCCT
T ss_pred             cCCcccCCCHHHHhcChhhhhccCc
Confidence            9999999999999999999875443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.6e-35  Score=256.34  Aligned_cols=172  Identities=26%  Similarity=0.363  Sum_probs=131.9

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      ||+++++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++. +  .+||+|||+++......   
T Consensus       135 ~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~-~--~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          135 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             EECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS-S--CEEECCCSSSCCC-------
T ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC-C--eEEEEecCccccccCCCccc
Confidence            7877789999987543         3678899999999999999999999999964 3  49999999997554322   


Q ss_pred             CCCCCcCCCCCcccccccCC----------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           69 RPKSTVGTPAYIAPEVLSRR----------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~----------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                      .....+||+.|+|||++.+.          ...+.++|||||||++|+|++|+.||.......   ..+..+.......+
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~  288 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE  288 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCC
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCC
Confidence            22345799999999998652          223566999999999999999999998754422   22233333333333


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .+...+..+.+||.+||..||.+|||+.++++||||+...
T Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             CCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            3445688999999999999999999999999999997543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.4e-35  Score=256.73  Aligned_cols=174  Identities=25%  Similarity=0.293  Sum_probs=133.7

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhh--hcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSL--SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH--~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++....           ++.+++.++.|||  ++||+||||||+|||++.+..+.+||+|||+++...  
T Consensus       135 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~--  212 (382)
T 2vx3_A          135 FEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG--  212 (382)
T ss_dssp             EECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT--
T ss_pred             EecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc--
Confidence            7899999999987653           3677899999999  579999999999999965444569999999997543  


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc------------
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY------------  135 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------------  135 (265)
                      .......+|+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+..+.........            
T Consensus       213 ~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  291 (382)
T 2vx3_A          213 QRIYQYIQSRFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKF  291 (382)
T ss_dssp             CCCCSSCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHH
T ss_pred             cccccccCCccccChHHHcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHH
Confidence            233456799999999999987765 5599999999999999999999987665555444432211000            


Q ss_pred             --cCC-------------------CCCC-------------------------CCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572          136 --KIP-------------------DYVH-------------------------ISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus       136 --~~~-------------------~~~~-------------------------~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                        ..+                   ....                         .++.+++||.+||..||.+|||+.++|
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L  371 (382)
T 2vx3_A          292 FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYAL  371 (382)
T ss_dssp             EEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             HHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHh
Confidence              000                   0000                         013789999999999999999999999


Q ss_pred             cCcccCCC
Q 024572          170 SHPWFLKN  177 (265)
Q Consensus       170 ~h~~f~~~  177 (265)
                      +||||++.
T Consensus       372 ~hp~f~~~  379 (382)
T 2vx3_A          372 QHSFFKKT  379 (382)
T ss_dssp             TSGGGCC-
T ss_pred             cCcccccC
Confidence            99999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.4e-35  Score=249.43  Aligned_cols=168  Identities=29%  Similarity=0.485  Sum_probs=132.5

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++. ++|.+++...+         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~  177 (327)
T 3a62_A          100 LEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCKESIHDGTV  177 (327)
T ss_dssp             EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSC--EEECCCSCC---------
T ss_pred             EeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCc--EEEEeCCcccccccCCcc
Confidence            78886 49999887654         3667899999999999999999999999987775  999999998753322 23


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.........    ..+.......|  ..++..+++
T Consensus       178 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~~~~~~p--~~~~~~~~~  250 (327)
T 3a62_A          178 THTFCGTIEYMAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTI----DKILKCKLNLP--PYLTQEARD  250 (327)
T ss_dssp             -CTTSSCCTTSCHHHHTTSCCC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHTCCCCC--TTSCHHHHH
T ss_pred             ccccCCCcCccCHhhCcCCCCC-CcccchhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCC--CCCCHHHHH
Confidence            3455799999999999887764 5699999999999999999999876543332    33333333333  368999999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+||     ++.++++||||+..
T Consensus       251 li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            99999999999999     88999999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3.2e-35  Score=253.53  Aligned_cols=175  Identities=21%  Similarity=0.295  Sum_probs=136.0

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhh--hcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSL--SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH--~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.++|.+.+..             ..++.+++.++.|||  ++||+||||||+|||++. ++  .+||+|||+++..
T Consensus       105 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~--~~kl~Dfg~a~~~  182 (360)
T 3e3p_A          105 MEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADG--TLKLCDFGSAKKL  182 (360)
T ss_dssp             EECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTT--EEEECCCTTCBCC
T ss_pred             eecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCC--cEEEeeCCCceec
Confidence            68888887665542             224677899999999  999999999999999986 54  4999999999866


Q ss_pred             CCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc---------
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY---------  135 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---------  135 (265)
                      ..........+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..+.........         
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (360)
T 3e3p_A          183 SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPS  262 (360)
T ss_dssp             CTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTT
T ss_pred             CCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccc
Confidence            65555556679999999999977664566799999999999999999999887665555444432111000         


Q ss_pred             -----------------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 -----------------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 -----------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                       ........+..+.+||.+||..||.+|||+.++++||||+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          263 HTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             CCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             hhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence                             000111256789999999999999999999999999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.8e-35  Score=268.06  Aligned_cols=172  Identities=28%  Similarity=0.405  Sum_probs=139.2

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++...+           ++.+|+.+|.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~--vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH--IRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCTTC
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCC--eEEEecccceecccCc
Confidence            78885 59998887543           3567899999999999999999999999988776  9999999998665444


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      .....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||...........+...+.......+  ..++++++
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~-~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p--~~~s~~~~  417 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS--ERFSPQAR  417 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEES-SHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC--TTSCHHHH
T ss_pred             cccccCCCccccCHHHHcCCCCC-ccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC--ccCCHHHH
Confidence            44556899999999999887775 5599999999999999999999876543222333333333333333  46899999


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      +||.+||..||.+||     ++.++++||||+..
T Consensus       418 dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             HHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            999999999999999     79999999999863

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3.2e-35  Score=253.03  Aligned_cols=174  Identities=32%  Similarity=0.546  Sum_probs=128.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..++         ++.+++.+|.|||++||+||||||+|||++. +..+.+||+|||+++.......
T Consensus       127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence            688864 9988876543         4678899999999999999999999999975 2234599999999976544444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  147 (265)
                      .....||+.|+|||++.+..+. .++|||||||++|+|++|+.||.........   ...+......  .+.+..++..+
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~  282 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYG-PEVDMWSVGIITYILLCGFEPFYDERGDQFM---FRRILNCEYYFISPWWDEVSLNA  282 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCTTCCTTCHHHH---HHHHHTTCCCCCTTTTTTSCHHH
T ss_pred             cccccCCCCccCHHHhcCCCCC-cccchHHHHHHHHHHHhCCCCCCCCcccHHH---HHHHHhCCCccCCchhhhCCHHH
Confidence            4556799999999999887765 5599999999999999999999876654322   2222333222  23345789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ++||.+||..||.+|||+.++++||||....
T Consensus       283 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999999999999998654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.2e-34  Score=260.07  Aligned_cols=172  Identities=24%  Similarity=0.383  Sum_probs=138.3

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++....             ++.+|+.+|.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~--vkL~DFGla~~~~~  341 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKA  341 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCT
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCC--EEEeecceeeeccC
Confidence            788865 9988886532             2667899999999999999999999999998776  99999999976544


Q ss_pred             CCCC-CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HSRP-KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .... ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||...........+...+.......|  ..++.
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p--~~~s~  418 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP--DKFSP  418 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC--TTSCH
T ss_pred             CCcccccccCCccccChhhhcCCCCC-hHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC--cccCH
Confidence            3332 345899999999999987775 5599999999999999999999876543333344444444444444  46899


Q ss_pred             HHHHHHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      .+++||.+||..||.+||+     +.++++||||+..
T Consensus       419 ~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             HHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            9999999999999999996     5899999999764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=7.5e-35  Score=270.19  Aligned_cols=168  Identities=32%  Similarity=0.525  Sum_probs=139.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+|+.+|.|||++|||||||||+||||+.++.  +||+|||+++.... ...
T Consensus       421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~~~~  498 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDGVT  498 (674)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSC--EEECCCTTCEECCCTTCC
T ss_pred             EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCc--EEEeecceeeccccCCcc
Confidence            788865 9999988654         3677899999999999999999999999998876  99999999975332 333


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.....    ....+......+|.  .++.++++
T Consensus       499 ~~~~~GT~~Y~APE~l~~~~~~-~~~DvwSlGvilyelltG~~Pf~~~~~~~----~~~~i~~~~~~~p~--~~s~~~~~  571 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQSIMEHNVAYPK--SMSKEAVA  571 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCCCBS-THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHSSCCCCCT--TSCHHHHH
T ss_pred             cccccCCCcccCHhhhcCCCCC-ccceEechHHHHHHHHcCCCCCCCCCHHH----HHHHHHhCCCCCCc--cCCHHHHH
Confidence            4556799999999999888775 55999999999999999999998865433    33344444444443  68999999


Q ss_pred             HHHHhcccCCCCCCCH-----HHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITI-----KEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~-----~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|+++     .+|++||||+..
T Consensus       572 li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          572 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            9999999999999997     999999999764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=9.8e-35  Score=242.49  Aligned_cols=173  Identities=30%  Similarity=0.555  Sum_probs=138.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-CcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++. ..+||+|||++........
T Consensus        84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA  163 (284)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence            678765 8888877654         3678899999999999999999999999976542 3599999999976655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--ccCCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--YKIPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  147 (265)
                      .....+++.|+|||++.+..++ .++||||||+++|+|++|+.||..........    .+....  ...+.+..+++.+
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  238 (284)
T 3kk8_A          164 WHGFAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHRLYA----QIKAGAYDYPSPEWDTVTPEA  238 (284)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCCTTTTTTSCHHH
T ss_pred             ccCCCCCcCCcCchhhcCCCCC-cccchHHHHHHHHHHHHCCCCCCCCchhHHHH----HHHhccccCCchhhcccCHHH
Confidence            5556799999999999887765 55999999999999999999998765433222    222222  2333445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .+||.+||..||.+|||+.++++||||++..
T Consensus       239 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          239 KSLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             HHHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence            9999999999999999999999999997653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.2e-35  Score=246.98  Aligned_cols=171  Identities=23%  Similarity=0.337  Sum_probs=123.6

Q ss_pred             CcccccchHHHHHHh-------------ccccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVMLE-------------GSVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~~-------------~~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.++|.+++...             .++.+++.++.|||++ ||+||||||+||+++.++.  +||+|||+++....
T Consensus        85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~  162 (290)
T 3fme_A           85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ--VKMCDFGISGYLVD  162 (290)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCC--EEBCCC--------
T ss_pred             EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC--EEEeecCCcccccc
Confidence            788988988877541             2467889999999998 9999999999999987765  99999999976555


Q ss_pred             CCCCCCCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           67 HSRPKSTVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ........+|+.|+|||++.   .....+.++|||||||++|+|++|+.||..........   ...............+
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~  239 (290)
T 3fme_A          163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---KQVVEEPSPQLPADKF  239 (290)
T ss_dssp             -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH---HHHHHSCCCCCCTTTS
T ss_pred             cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH---HHHhccCCCCcccccC
Confidence            44445557999999999973   22333566999999999999999999998654432221   1222222222223468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            999999999999999999999999999999964

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.2e-34  Score=246.80  Aligned_cols=173  Identities=28%  Similarity=0.453  Sum_probs=135.3

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.+++...        .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...... ..
T Consensus       121 ~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~~~  198 (321)
T 2c30_A          121 MEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKR  198 (321)
T ss_dssp             ECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSSSCCB
T ss_pred             EecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCc--EEEeeeeeeeecccCcccc
Confidence            688755 888876543        24778899999999999999999999999987765  9999999987544332 23


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-ccCCCCCCCCHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKIPDYVHISQDCRN  149 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  149 (265)
                      ....||+.|+|||++.+..++ .++|||||||++|+|++|+.||..........    .+.... ........+++.+.+
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~  273 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSLYA-TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK----RLRDSPPPKLKNSHKVSPVLRD  273 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSSCCCCTTGGGSCHHHHH
T ss_pred             ccccCCccccCHhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhcCCCCCcCccccCCHHHHH
Confidence            445799999999999887765 45999999999999999999998765433222    222211 122233457899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ||.+||..||.+|||+.++++||||.+....
T Consensus       274 li~~~l~~dp~~Rps~~ell~hp~~~~~~~~  304 (321)
T 2c30_A          274 FLERMLVRDPQERATAQELLDHPFLLQTGLP  304 (321)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSGGGGGCCCG
T ss_pred             HHHHHccCChhhCcCHHHHhcChhhccCCCc
Confidence            9999999999999999999999999865443

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.3e-35  Score=259.70  Aligned_cols=173  Identities=27%  Similarity=0.460  Sum_probs=136.6

Q ss_pred             Cccc-ccchHHHHHHh-c---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLG-VSSLSEFVMLE-G---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~-~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++ +++|.+++... +         ++.+++.+|.|||++|||||||||+|||++.++.  +||+|||+|+.......
T Consensus       153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~--vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH--IRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSC
T ss_pred             EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCC--EEEcchhhhhhcccCCC
Confidence            7888 55999999763 2         3678899999999999999999999999998776  99999999975443322


Q ss_pred             --CCCCcCCCCCccccccc-----CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-CC
Q 024572           70 --PKSTVGTPAYIAPEVLS-----RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-YV  141 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~-----~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~  141 (265)
                        ....+||+.|+|||++.     ...+ +.++|||||||++|+|++|+.||.+......+..++....  ....|. ..
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~  307 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRY-GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE--RFQFPTQVT  307 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEE-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH--HCCCCSSCC
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCC-CCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc--cccCCcccc
Confidence              23457999999999997     3344 4569999999999999999999988765544444433221  223333 24


Q ss_pred             CCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccCCCC
Q 024572          142 HISQDCRNLLSRIFVANPSR--RITIKEIKSHPWFLKNL  178 (265)
Q Consensus       142 ~~~~~~~~li~~~L~~dP~~--R~s~~ell~h~~f~~~~  178 (265)
                      .+++++++||++||..+|++  |+++.++++||||+..-
T Consensus       308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence            58999999999999988888  99999999999998643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.3e-35  Score=250.93  Aligned_cols=165  Identities=27%  Similarity=0.386  Sum_probs=135.4

Q ss_pred             Ccccc-c-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-S-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. + +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       108 ~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a~~~~~~~~  185 (335)
T 3dls_A          108 MEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFT--IKLIDFGSAAYLERGKL  185 (335)
T ss_dssp             EECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTCC
T ss_pred             EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCc--EEEeecccceECCCCCc
Confidence            56553 3 8888887653         4778899999999999999999999999988765  99999999986655544


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....||+.|+|||++.+..+.+.++|||||||++|+|++|+.||.....          ..  ......+..+++.+.+
T Consensus       186 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~~--~~~~~~~~~~~~~l~~  253 (335)
T 3dls_A          186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------TV--EAAIHPPYLVSKELMS  253 (335)
T ss_dssp             BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------GT--TTCCCCSSCCCHHHHH
T ss_pred             eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------HH--hhccCCCcccCHHHHH
Confidence            45567999999999999888767779999999999999999999976321          11  1122333458999999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      ||.+||..||.+|||+.++++||||++...
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~~~~~~~  283 (335)
T 3dls_A          254 LVSGLLQPVPERRTTLEKLVTDPWVTQPVN  283 (335)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred             HHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence            999999999999999999999999987654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.2e-35  Score=254.93  Aligned_cols=177  Identities=21%  Similarity=0.294  Sum_probs=130.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus       113 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~  190 (362)
T 3pg1_A          113 TELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND--ITICDFNLAREDTADANK  190 (362)
T ss_dssp             EECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCTTC----------
T ss_pred             EccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC--EEEEecCccccccccccc
Confidence            7889999988887543          4678999999999999999999999999987775  999999999755554455


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc----------------
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ----------------  134 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------------  134 (265)
                      ....+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.........+........                
T Consensus       191 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  270 (362)
T 3pg1_A          191 THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYL  270 (362)
T ss_dssp             -----CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHT
T ss_pred             ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHH
Confidence            5567999999999998744445679999999999999999999988765544444332211100                


Q ss_pred             ----ccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          135 ----YKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       135 ----~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                          ...+      ....+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  325 (362)
T 3pg1_A          271 RNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD  325 (362)
T ss_dssp             TTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence                0000      11246888999999999999999999999999999987543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=8.6e-35  Score=247.97  Aligned_cols=177  Identities=19%  Similarity=0.282  Sum_probs=133.3

Q ss_pred             Cccccc-chHHHHH------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVS-SLSEFVM------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~-sL~~~~~------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.+ +|.+++.      ...++.+++.+|.|||++||+||||||+|||++.++. .+||+|||+++...........
T Consensus       112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~-~~kl~Dfg~a~~~~~~~~~~~~  190 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVR  190 (330)
T ss_dssp             EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT-EEEECCCTTCEECCTTCCCCSC
T ss_pred             EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCC-EEEEEeCCCceEcCCCCccccc
Confidence            566664 6766643      2335778999999999999999999999999986652 4999999999866555555666


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh----------hcc--------
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA----------VQY--------  135 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------~~~--------  135 (265)
                      .++..|+|||++.+....+.++|||||||++|+|++|+.||............+.....          ...        
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (330)
T 3nsz_A          191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND  270 (330)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHH
T ss_pred             cccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhh
Confidence            89999999999987554566799999999999999999999665443222111111100          000        


Q ss_pred             --------------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          136 --------------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       136 --------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                                    .......+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          271 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             HHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             hhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                          0011122789999999999999999999999999999998653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.4e-35  Score=256.59  Aligned_cols=171  Identities=25%  Similarity=0.428  Sum_probs=134.1

Q ss_pred             Cccc-ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLG-VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++ +++|.+++...+          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~--vkL~DFGla~~~~~~~~  217 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH--IRLADFGSCLKLRADGT  217 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSC
T ss_pred             EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC--EEEeechhheeccCCCc
Confidence            7888 559999998753          2667899999999999999999999999998776  99999999975543322


Q ss_pred             --CCCCcCCCCCcccccccC-------CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC-
Q 024572           70 --PKSTVGTPAYIAPEVLSR-------REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD-  139 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~-------~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-  139 (265)
                        ....+||+.|+|||++..       ..+ +.++|||||||++|+|++|+.||........+..++...  .....|. 
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~-~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~~~p~~  294 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSY-GPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK--EHLSLPLV  294 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHTCTTCSEE-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH--HHCCCC--
T ss_pred             cccceeccccCcCCHHHHhhcccCcCCCCC-ChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--cCcCCCcc
Confidence              234579999999999973       334 456999999999999999999998866544444433221  1122332 


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCcccCCC
Q 024572          140 YVHISQDCRNLLSRIFVANPSRR---ITIKEIKSHPWFLKN  177 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R---~s~~ell~h~~f~~~  177 (265)
                      ...+++++++||.+||. +|.+|   +++.++++||||+..
T Consensus       295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            24689999999999999 99998   599999999999764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.4e-35  Score=250.96  Aligned_cols=172  Identities=26%  Similarity=0.379  Sum_probs=130.2

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||+++++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++. +  .+||+|||+++.......  
T Consensus        88 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~-~--~~kl~DFG~a~~~~~~~~~~  164 (343)
T 3dbq_A           88 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSV  164 (343)
T ss_dssp             ECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T--EEEECCCSSSCCC-------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC-C--cEEEeecccccccCcccccc
Confidence            7888889999987654         3678899999999999999999999999973 3  499999999975543322  


Q ss_pred             -CCCCcCCCCCcccccccC----------CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           70 -PKSTVGTPAYIAPEVLSR----------REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~----------~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                       ....+||+.|+|||++.+          ....+.++|||||||++|+|++|+.||.......   ..+...........
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~  241 (343)
T 3dbq_A          165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE  241 (343)
T ss_dssp             -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCCC
T ss_pred             cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcCCcccC
Confidence             234579999999999864          1233556999999999999999999998754432   12222233333333


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .+...+..+.+||.+||..||.+|||+.++++||||+...
T Consensus       242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            3445778999999999999999999999999999997543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1e-34  Score=246.98  Aligned_cols=174  Identities=25%  Similarity=0.297  Sum_probs=138.5

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.++|.+++....           ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        98 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~  175 (326)
T 1blx_A           98 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMA  175 (326)
T ss_dssp             EECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECSCCSCCCCCGGGG
T ss_pred             EecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCC--EEEecCcccccccCCCC
Confidence            6888899999887642           3678899999999999999999999999988775  99999999876544333


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-ccC-----------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-YKI-----------  137 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~-----------  137 (265)
                      .....+++.|+|||++.+..+. .++|||||||++|+|++|+.||.+......+..++....... ..+           
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (326)
T 1blx_A          176 LTSVVVTLWYRAPEVLLQSSYA-TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF  254 (326)
T ss_dssp             GCCCCCCCTTCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS
T ss_pred             ccccccccceeCHHHHhcCCCC-cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhh
Confidence            4456789999999999887765 559999999999999999999988766555444443221100 000           


Q ss_pred             ---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          138 ---------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       138 ---------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                               .....++..+++||.+||..||.+|||+.++++||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence                     0123578899999999999999999999999999999754

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=6.2e-35  Score=242.73  Aligned_cols=172  Identities=35%  Similarity=0.619  Sum_probs=130.5

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.........
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~  167 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDGEFL  167 (276)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSC--EEECCCCGGGCCCC----
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCC--EEEeecccccccCCCcce
Confidence            67885 49999987653         3677899999999999999999999999987765  999999999765544444


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||++.+..+.+.++||||||+++|+|++|+.||.......    ....+.......+  ..++..+.++
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~--~~~~~~l~~l  241 (276)
T 2h6d_A          168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT----LFKKIRGGVFYIP--EYLNRSVATL  241 (276)
T ss_dssp             ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHHH
T ss_pred             ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH----HHHHhhcCcccCc--hhcCHHHHHH
Confidence            456789999999999887765667999999999999999999997754322    2222222322233  3678999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      |.+||..||.+|||+.++++||||++..+.
T Consensus       242 i~~~l~~~p~~Rps~~~~l~h~~~~~~~~~  271 (276)
T 2h6d_A          242 LMHMLQVDPLKRATIKDIREHEWFKQDLPS  271 (276)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSHHHHTTCCG
T ss_pred             HHHHccCChhhCCCHHHHHhChhhccCchh
Confidence            999999999999999999999999877654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=4.6e-35  Score=253.55  Aligned_cols=169  Identities=31%  Similarity=0.573  Sum_probs=135.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||++.........
T Consensus       179 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~--ikl~DfG~~~~~~~~~~~  256 (365)
T 2y7j_A          179 FDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ--IRLSDFGFSCHLEPGEKL  256 (365)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCCB
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEEecCcccccCCCccc
Confidence            788876 9999887543         3678899999999999999999999999988775  999999998766555555


Q ss_pred             CCCcCCCCCcccccccCC------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCC
Q 024572           71 KSTVGTPAYIAPEVLSRR------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVH  142 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  142 (265)
                      ....||+.|+|||++.+.      .+ +.++|||||||++|+|++|+.||.........    ..+.......  +.+..
T Consensus       257 ~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~~Di~slG~il~ell~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~  331 (365)
T 2y7j_A          257 RELCGTPGYLAPEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILML----RMIMEGQYQFSSPEWDD  331 (365)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCTTSCCB-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCHHHHSS
T ss_pred             ccCCCCCCccChhhccccccccCcCC-CchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCCccccc
Confidence            566899999999998642      33 45599999999999999999999875443222    2222222222  22346


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++..+.+||.+||..||.+|||+.++++||||++
T Consensus       332 ~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            7899999999999999999999999999999963

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=5.6e-36  Score=260.27  Aligned_cols=160  Identities=18%  Similarity=0.191  Sum_probs=127.5

Q ss_pred             CcccccchHHHHHHh----------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVSSLSEFVMLE----------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||+++++|.+++..+                .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus       179 ~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DFG~a~~~  256 (377)
T 3byv_A          179 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG--VFLTGFEHLVRD  256 (377)
T ss_dssp             EECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCGGGCEET
T ss_pred             EeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEEechhheec
Confidence            789989999998753                25678899999999999999999999999997765  999999999743


Q ss_pred             CCCCCCCCCcCCCCCcccccccCC-----------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRR-----------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      .  ......+| +.|+|||++.+.           .+ +.++|||||||++|+|++|+.||.........          
T Consensus       257 ~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~----------  322 (377)
T 3byv_A          257 G--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLM-TFSFDAWALGLVIYWIWCADLPITKDAALGGS----------  322 (377)
T ss_dssp             T--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEEC-CHHHHHHHHHHHHHHHHHSSCCC------CCS----------
T ss_pred             C--CcccCCCC-cCccChhhhcccccccccccccccC-ChhhhHHHHHHHHHHHHHCCCCCcccccccch----------
Confidence            2  22334567 999999999876           55 46699999999999999999999764432111          


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .........+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       323 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          323 EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             GGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             hhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            1111223468999999999999999999999999999999963

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=5.8e-35  Score=248.45  Aligned_cols=174  Identities=29%  Similarity=0.485  Sum_probs=138.2

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC--CcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA--PRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~--~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....         ++.+++.+|.|||++||+||||||+||+++.++.  ..+||+|||+++......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~  173 (321)
T 2a2a_A           94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV  173 (321)
T ss_dssp             ECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc
Confidence            68885 59999987543         3677899999999999999999999999987652  149999999998665554


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  146 (265)
                      ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.......    ..+.......+  .+..++..
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~  248 (321)
T 2a2a_A          174 EFKNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGDTKQETL----ANITSVSYDFDEEFFSHTSEL  248 (321)
T ss_dssp             CCCCCCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHTTCCCCCHHHHTTCCHH
T ss_pred             cccccCCCCCccCcccccCCCCC-CccccHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhcccccChhhhcccCHH
Confidence            45566799999999999877765 5599999999999999999999876543322    22232222222  12367899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      +.+||.+||..||.+|||+.++++||||+....
T Consensus       249 ~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~  281 (321)
T 2a2a_A          249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDN  281 (321)
T ss_dssp             HHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCccccCCCc
Confidence            999999999999999999999999999976543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=8.4e-36  Score=258.69  Aligned_cols=175  Identities=27%  Similarity=0.365  Sum_probs=125.2

Q ss_pred             CcccccchHHHHHH-------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVML-------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~-------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+++..       ..++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...........
T Consensus       109 ~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~~~  186 (371)
T 2xrw_A          109 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPY  186 (371)
T ss_dssp             EECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCCCC-------------
T ss_pred             EEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC--EEEEEeecccccccccccCCc
Confidence            78999998887752       235778999999999999999999999999988775  999999999765444444556


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------cccCC
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------QYKIP  138 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~  138 (265)
                      .+|+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+..++......               ....+
T Consensus       187 ~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (371)
T 2xrw_A          187 VVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP  265 (371)
T ss_dssp             ---CTTCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSC
T ss_pred             eecCCccCHHHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCc
Confidence            799999999999887775 45999999999999999999998876544443332211000               00001


Q ss_pred             CCC---------------------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          139 DYV---------------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       139 ~~~---------------------~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ...                     ..+..+++||.+||..||.+|||+.++++||||+...
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          266 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             CCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             cccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence            000                     0146789999999999999999999999999997543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.6e-35  Score=251.69  Aligned_cols=170  Identities=29%  Similarity=0.555  Sum_probs=133.7

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.+ +|.+++..+.             ++.+++.+|.|||++||+||||||+|||++.++ ...+||+|||+++...
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~  184 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG  184 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence            788874 8988776542             367899999999999999999999999997643 2359999999997654


Q ss_pred             CCCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCC
Q 024572           66 LHSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVH  142 (265)
Q Consensus        66 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  142 (265)
                      .... ....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+..  .   .....+.......+  .+..
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~pf~~~~--~---~~~~~i~~~~~~~~~~~~~~  258 (351)
T 3c0i_A          185 ESGLVAGGRVGTPHFMAPEVVKREPYG-KPVDVWGCGVILFILLSGCLPFYGTK--E---RLFEGIIKGKYKMNPRQWSH  258 (351)
T ss_dssp             TTSCBCCCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCSSH--H---HHHHHHHHTCCCCCHHHHTT
T ss_pred             CCCeeecCCcCCcCccCHHHHcCCCCC-chHhhHHHHHHHHHHHHCCCCCCCcH--H---HHHHHHHcCCCCCCcccccc
Confidence            3322 3345799999999999887775 55999999999999999999998742  1   22222333322222  2246


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++..+++||.+||..||.+|||+.++++||||+.
T Consensus       259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            8999999999999999999999999999999964

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.5e-35  Score=252.10  Aligned_cols=174  Identities=28%  Similarity=0.515  Sum_probs=136.6

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC--CCcEEEeccCCcccCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP--APRLKICDFGYSKSSLLH-   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~--~~~vkl~Dfg~a~~~~~~-   67 (265)
                      ||++.+ +|.+++..++         ++.+++.+|.|||++||+||||||+|||+....  .+.+||+|||+++..... 
T Consensus        95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            789865 9999887654         367789999999999999999999999985432  134999999999754433 


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  145 (265)
                      ......++|+.|+|||++.+..++ .++|||||||++|+|++|..||..... .....+...+....+..+  .+..++.
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~  252 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYD-AACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSGKFSLSGGYWNSVSD  252 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHSSCSSCSSTT-SCHHHHHHHHHHCCCCCCSTTTTTSCH
T ss_pred             CceeccCCCccccCHHHhcCCCCC-CccCeeeHhHHHHHHhcCCCCCCCCCc-CCHHHHHHHHccCCcccCccccccCCH
Confidence            233456799999999999876664 559999999999999999999986432 122334444444444333  3457899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .+++||.+||..||.+|||+.++++||||..
T Consensus       253 ~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          253 TAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            9999999999999999999999999999954

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=5.9e-35  Score=249.22  Aligned_cols=172  Identities=26%  Similarity=0.346  Sum_probs=132.5

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-----------------CCc
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-----------------APR   52 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-----------------~~~   52 (265)
                      ||+++++|.+++..+.           ++.+++.+|.|||++||+||||||+|||++..+                 .+.
T Consensus        96 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~  175 (339)
T 1z57_A           96 FELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD  175 (339)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC
T ss_pred             EcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC
Confidence            7899889999988664           366789999999999999999999999998643                 345


Q ss_pred             EEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh
Q 024572           53 LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA  132 (265)
Q Consensus        53 vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~  132 (265)
                      +||+|||+++...  .......+|+.|+|||++.+..++ .++|||||||++|+|++|+.||............ .....
T Consensus       176 ~kl~Dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~  251 (339)
T 1z57_A          176 IKVVDFGSATYDD--EHHSTLVSTRHYRAPEVILALGWS-QPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM-ERILG  251 (339)
T ss_dssp             EEECCCSSCEETT--SCCCSSCSCGGGCCHHHHTTSCCC-THHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH-HHHHC
T ss_pred             ceEeeCcccccCc--cccccccCCccccChHHhhCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHhC
Confidence            9999999987533  233456799999999999887765 5599999999999999999999876554332222 21111


Q ss_pred             hcc---------------------------------------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          133 VQY---------------------------------------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       133 ~~~---------------------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      ...                                       ........++.+.+||.+||..||.+|||+.++++|||
T Consensus       252 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~  331 (339)
T 1z57_A          252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF  331 (339)
T ss_dssp             SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGG
T ss_pred             CCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHH
Confidence            000                                       00001123467899999999999999999999999999


Q ss_pred             cCC
Q 024572          174 FLK  176 (265)
Q Consensus       174 f~~  176 (265)
                      |+.
T Consensus       332 f~~  334 (339)
T 1z57_A          332 FDL  334 (339)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=245.11  Aligned_cols=175  Identities=25%  Similarity=0.354  Sum_probs=128.6

Q ss_pred             Cccccc-chHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+ +|.+++...         .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... .
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSV--IKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECC-----
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCC--EEEeeCCCchhccCcccc
Confidence            677777 566665533         24667899999999999999999999999987775  9999999997544322 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh---------------hc
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA---------------VQ  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------~~  134 (265)
                      .....+++.|+|||++.+....+.++|||||||++|+|++|+.||.+................               ..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG  238 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence            334578999999999987554456799999999999999999999887655444333222110               00


Q ss_pred             ccCCC----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 YKIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 ~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...+.          ...++..+.+||.+||..||.+|||+.++++||||++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence            01111          13578899999999999999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.5e-35  Score=251.66  Aligned_cols=173  Identities=28%  Similarity=0.410  Sum_probs=136.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus       138 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~~~~~~~~~  215 (355)
T 1vzo_A          138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH--VVLTDFGLSKEFVADETE  215 (355)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEESCSSEEEECCGGGGG
T ss_pred             eecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCc--EEEeeCCCCeecccCCCC
Confidence            788865 9999987654         3667899999999999999999999999988775  9999999987543221  


Q ss_pred             CCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .....+||+.|+|||++.+.. ..+.++|||||||++|+|++|+.||...........+...+.....  +.+..++..+
T Consensus       216 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  293 (355)
T 1vzo_A          216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--PYPQEMSALA  293 (355)
T ss_dssp             GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC--CCCTTSCHHH
T ss_pred             cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC--CCCcccCHHH
Confidence            223356999999999998632 2356699999999999999999999865443333344444333333  3334689999


Q ss_pred             HHHHHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      .+||.+||..||.+||     |+.++++||||++.
T Consensus       294 ~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          294 KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            9999999999999999     99999999999754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=7.6e-35  Score=261.19  Aligned_cols=171  Identities=34%  Similarity=0.553  Sum_probs=135.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++..+ .+.+||+|||+++.......
T Consensus       100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  179 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK  179 (486)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence            688865 8988886544         477889999999999999999999999996432 23599999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+. + +.++|||||||++|+|++|+.||.+......+    ..+....+  ..+.+..+++.+
T Consensus       180 ~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  253 (486)
T 3mwu_A          180 MKDRIGTAYYIAPEVLRGT-Y-DEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDDA  253 (486)
T ss_dssp             --CCTTGGGGCCGGGGGSC-C-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCSCSGGGGGSCHHH
T ss_pred             cCCCcCCCCCCCHHHhCCC-C-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCCcccCCCCHHH
Confidence            5566899999999999763 4 45699999999999999999999886543332    23333332  334455789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||.+|||+.++++||||++.
T Consensus       254 ~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          254 KDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence            999999999999999999999999999754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3e-35  Score=252.25  Aligned_cols=161  Identities=31%  Similarity=0.523  Sum_probs=123.4

Q ss_pred             ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-----CCCCCcCCCCCcccccccCC-c
Q 024572           16 GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-----RPKSTVGTPAYIAPEVLSRR-E   89 (265)
Q Consensus        16 ~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-~   89 (265)
                      .++.+++.++.|||++||+||||||+|||++.++...+||+|||+++......     ......||+.|+|||++.+. .
T Consensus       172 ~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  251 (345)
T 3hko_A          172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE  251 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence            35778999999999999999999999999987764469999999987543221     12345699999999999752 3


Q ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 024572           90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIK  169 (265)
Q Consensus        90 ~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell  169 (265)
                      ..+.++|||||||++|+|++|+.||.+.............  ......+.+..+++.+.+||.+||..||.+|||+.+++
T Consensus       252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  329 (345)
T 3hko_A          252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK--KLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL  329 (345)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhc--ccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence            3345699999999999999999999887654443333221  11122233335789999999999999999999999999


Q ss_pred             cCcccCCCC
Q 024572          170 SHPWFLKNL  178 (265)
Q Consensus       170 ~h~~f~~~~  178 (265)
                      +||||+...
T Consensus       330 ~hp~~~~~~  338 (345)
T 3hko_A          330 QHPWISQFS  338 (345)
T ss_dssp             HSHHHHTTS
T ss_pred             cChhhccCh
Confidence            999997643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=9.6e-35  Score=261.02  Aligned_cols=170  Identities=31%  Similarity=0.529  Sum_probs=137.2

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++..+ .+.+||+|||+++.......
T Consensus       115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            788866 8988887653         477889999999999999999999999997643 24599999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.+......+    ..+....+.  .+.+..+++.+
T Consensus       195 ~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  268 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRK-KY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEIL----RKVEKGKYTFDSPEWKNVSEGA  268 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTT-CB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCSGGGTTSCHHH
T ss_pred             ccccCCCcCeeCHHHHcc-cC-CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCchhcccCCHHH
Confidence            556789999999999864 45 45699999999999999999999886553332    233333332  33445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ++||.+||..||.+|||+.++++||||+.
T Consensus       269 ~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          269 KDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHHHHHCCCChhhCccHHHHhcCccccc
Confidence            99999999999999999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=6.3e-35  Score=248.86  Aligned_cols=176  Identities=26%  Similarity=0.475  Sum_probs=118.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH-S   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~-~   68 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++ ...+||+|||+++..... .
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  164 (325)
T 3kn6_A           85 MELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ  164 (325)
T ss_dssp             ECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred             EEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence            788866 9999987654         477889999999999999999999999997654 225999999999754332 2


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHHHhhhcccCCC--CCCC
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---KNFRKTISRIMAVQYKIPD--YVHI  143 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~  143 (265)
                      .....++|+.|+|||++.+..++ .++|||||||++|+|++|+.||......   ......+..+.......+.  +..+
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV  243 (325)
T ss_dssp             -------------------CCCC-HHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTS
T ss_pred             cccccCCCcCccCHHHhcCCCCC-CccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCC
Confidence            23445689999999999887765 5599999999999999999999765431   1123334444444333322  2358


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++.+++||.+||..||.+|||+.++++||||+..
T Consensus       244 s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             CHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             CHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            9999999999999999999999999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7.6e-35  Score=250.22  Aligned_cols=176  Identities=23%  Similarity=0.313  Sum_probs=132.3

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCC-----------------CCCc
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS-----------------PAPR   52 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-----------------~~~~   52 (265)
                      ||+++++|.+++..+.           ++.+++.+|.|||++||+||||||+|||++..                 ..+.
T Consensus       101 ~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  180 (355)
T 2eu9_A          101 FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS  180 (355)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCC
T ss_pred             EeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCc
Confidence            7899888888877654           36788999999999999999999999999432                 1235


Q ss_pred             EEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh
Q 024572           53 LKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA  132 (265)
Q Consensus        53 vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~  132 (265)
                      +||+|||+++...  .......||+.|+|||++.+..++ .++|||||||++|+|++|+.||..................
T Consensus       181 ~kl~Dfg~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  257 (355)
T 2eu9_A          181 IRVADFGSATFDH--EHHTTIVATRHYRPPEVILELGWA-QPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP  257 (355)
T ss_dssp             EEECCCTTCEETT--SCCCSSCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             EEEeecCcccccc--ccccCCcCCCcccCCeeeecCCCC-CccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999999997533  233456799999999999887775 4599999999999999999999876554433222211100


Q ss_pred             hc--------------------------------------ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          133 VQ--------------------------------------YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       133 ~~--------------------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ..                                      .........+..+.+||.+||..||.+|||+.++++||||
T Consensus       258 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f  337 (355)
T 2eu9_A          258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF  337 (355)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGG
T ss_pred             CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence            00                                      0000011124578899999999999999999999999999


Q ss_pred             CCCCC
Q 024572          175 LKNLP  179 (265)
Q Consensus       175 ~~~~~  179 (265)
                      +...+
T Consensus       338 ~~~~~  342 (355)
T 2eu9_A          338 AGLTP  342 (355)
T ss_dssp             GGCCH
T ss_pred             cCCCh
Confidence            86543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.9e-34  Score=247.99  Aligned_cols=175  Identities=25%  Similarity=0.357  Sum_probs=133.4

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC----
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS----   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~----   68 (265)
                      ||++.++|.+++....        ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......    
T Consensus        93 ~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~  170 (353)
T 2b9h_A           93 QELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNS  170 (353)
T ss_dssp             ECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECC-------
T ss_pred             EeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCc--EEEEeccccccccccccccc
Confidence            6888899998876543        4778899999999999999999999999987765  9999999987543221    


Q ss_pred             -------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc-------
Q 024572           69 -------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ-------  134 (265)
Q Consensus        69 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------  134 (265)
                             ......||+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..+........       
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (353)
T 2b9h_A          171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC  250 (353)
T ss_dssp             ---------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTT
T ss_pred             CccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccc
Confidence                   112346899999999987644456679999999999999999999988765443333222111000       


Q ss_pred             -------------ccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 -------------YKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 -------------~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                   ...+      .+..+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             cccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                         0000      013578999999999999999999999999999999754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=9e-35  Score=253.59  Aligned_cols=175  Identities=17%  Similarity=0.255  Sum_probs=129.9

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC--
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL--   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~--   66 (265)
                      ||++.+ +|.+++...           .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||.+.....  
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~--~kl~dfg~~~~~~~~~  182 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK--VYLSGLRSNLSMISHG  182 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCGGGCEECEETT
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEcccccceeecccc
Confidence            688864 899988764           24678899999999999999999999999987775  99999998753221  


Q ss_pred             ------CCCCCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-----
Q 024572           67 ------HSRPKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-----  133 (265)
Q Consensus        67 ------~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----  133 (265)
                            ........||+.|+|||++.+  ..+ +.++|||||||++|+|++|+.||.+..........+......     
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  261 (389)
T 3gni_B          183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS  261 (389)
T ss_dssp             EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCB-CTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred             ccccccccccccccccccccCHHHHhccCCCC-CcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence                  122233478999999999987  345 456999999999999999999998766544433322111000     


Q ss_pred             -----------------------------------cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          134 -----------------------------------QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       134 -----------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                                                         ....+.+..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence                                               001112335788999999999999999999999999999997643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.4e-34  Score=242.17  Aligned_cols=170  Identities=26%  Similarity=0.458  Sum_probs=126.0

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCC-CCCcEEEeccCCcccCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.+ +|.+++...             .++.+++.+|.|||++||+||||||+||+++.. ..+.+||+|||+++...
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            688866 888887543             246788999999999999999999999999542 23459999999997655


Q ss_pred             CCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC-CCCCCCC
Q 024572           66 LHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI-PDYVHIS  144 (265)
Q Consensus        66 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  144 (265)
                      .........+++.|+|||++.+ .+ +.++|||||||++|+|++|+.||.+.......    .......... .....++
T Consensus       179 ~~~~~~~~~~t~~y~aPE~~~~-~~-~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~  252 (285)
T 3is5_A          179 SDEHSTNAAGTALYMAPEVFKR-DV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ----QKATYKEPNYAVECRPLT  252 (285)
T ss_dssp             --------CTTGGGCCHHHHTT-CC-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCC--CCCC
T ss_pred             CcccCcCcccccCcCChHHhcc-CC-CcccCeehHHHHHHHHHhCCCCCCCCCHHHHH----hhhccCCcccccccCcCC
Confidence            5444556679999999999864 34 46699999999999999999999876533222    1111111111 1223478


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      +.+.+||.+||..||.+|||+.++++||||++
T Consensus       253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            99999999999999999999999999999975

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=4.8e-35  Score=249.72  Aligned_cols=175  Identities=24%  Similarity=0.430  Sum_probs=132.2

Q ss_pred             Cccccc-chHHHHHH-----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVML-----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~-----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..           ..++.+++.+|.|||++||+||||||+|||++... .+.+||+|||+++.....
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence            677755 77776632           23477899999999999999999999999998621 235999999999866554


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .......||+.|+|||++.+..++ .++|||||||++|+|++|+.||..............  .......+.+..++..+
T Consensus       188 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~  264 (327)
T 3lm5_A          188 CELREIMGTPEYLAPEILNYDPIT-TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--VNVDYSEETFSSVSQLA  264 (327)
T ss_dssp             ------CCCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCTTTTTTSCHHH
T ss_pred             cccccccCCcCccCCeeecCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh--cccccCchhhcccCHHH
Confidence            444556799999999999887765 559999999999999999999988655433322221  12222333445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .+||.+||..||.+|||+.++++||||+...
T Consensus       265 ~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            9999999999999999999999999997653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.3e-34  Score=240.96  Aligned_cols=169  Identities=32%  Similarity=0.539  Sum_probs=134.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEE---cCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll---~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..+.         ++.+++.++.|||++||+||||||+||++   +.++  .+||+|||++......
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~--~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS--PLKLIDFGLAARFKPG  162 (277)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC--CEEECCCTTCEECCTT
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCC--cEEEEecccceeccCc
Confidence            688855 8988877654         37778999999999999999999999999   4444  4999999999766555


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC--CCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  145 (265)
                      .......+|+.|+|||++.+. + +.++||||||+++|+|++|+.||..........    .+.......+.  +..+++
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~-~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  236 (277)
T 3f3z_A          163 KMMRTKVGTPYYVSPQVLEGL-Y-GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML----KIREGTFTFPEKDWLNVSP  236 (277)
T ss_dssp             SCBCCCCSCTTTCCHHHHTTC-B-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHCCCCCCHHHHTTSCH
T ss_pred             cchhccCCCCCccChHHhccc-C-CchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhCCCCCCchhhhcCCH
Confidence            555566799999999998764 4 455999999999999999999998765433322    22223332222  235789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+.+||.+||..||.+|||+.++++||||++.
T Consensus       237 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999999999999999653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2e-34  Score=250.02  Aligned_cols=173  Identities=23%  Similarity=0.296  Sum_probs=130.5

Q ss_pred             CcccccchHHHHH-------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVM-------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~-------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+++.       ...++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...  ......
T Consensus       126 ~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~~--~~~~~~  201 (371)
T 4exu_A          126 MPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHAD--AEMTGY  201 (371)
T ss_dssp             EECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECSTTCC----------CT
T ss_pred             EccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCC--EEEEecCcccccc--cCcCCc
Confidence            6778887776553       2345778999999999999999999999999988776  9999999997443  233456


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------------c
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------------Q  134 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~  134 (265)
                      .+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..++......                   .
T Consensus       202 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (371)
T 4exu_A          202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL  281 (371)
T ss_dssp             TCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHS
T ss_pred             ccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhcc
Confidence            789999999999874444566999999999999999999998876555444443321100                   0


Q ss_pred             ccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 YKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 ~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...+      .+..+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             CCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            0000      123568999999999999999999999999999999754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.7e-34  Score=244.74  Aligned_cols=177  Identities=29%  Similarity=0.495  Sum_probs=129.4

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-CcEEEeccCCcccCCCCC-
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++. ++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++. ..+||+|||+++...... 
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           90 FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred             EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence            78886 59999987654         3678899999999999999999999999986543 349999999986443211 


Q ss_pred             -------CCCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH-----------HHHH
Q 024572           69 -------RPKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK-----------NFRK  125 (265)
Q Consensus        69 -------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~-----------~~~~  125 (265)
                             .....+||+.|+|||++.+     ..++ .++|||||||++|+|++|+.||.+.....           ....
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  248 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM  248 (316)
T ss_dssp             ------------CCSGGGCCHHHHHHTSHHHHHHT-TTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred             cccccccccccccCCcCccChHHhhcccccccCCC-cccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence                   1123459999999999875     3343 45999999999999999999998754321           1122


Q ss_pred             HHHHHhhhcccCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          126 TISRIMAVQYKIPD--YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       126 ~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ....+.......+.  +..++..+++||.+||..||.+|||+.++++||||+...
T Consensus       249 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             HHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            23333333333332  235789999999999999999999999999999998643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.2e-34  Score=246.70  Aligned_cols=170  Identities=25%  Similarity=0.327  Sum_probs=135.0

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.++|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....   .
T Consensus       133 ~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DfG~a~~~~~---~  207 (348)
T 1u5q_A          133 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL--VKLGDFGSASIMAP---A  207 (348)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE--EEECCCTTCBSSSS---B
T ss_pred             EecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC--EEEeeccCceecCC---C
Confidence            7899999888876432          4677899999999999999999999999997765  99999999875432   2


Q ss_pred             CCCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 KSTVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ....||+.|+|||++.   ...+ +.++|||||||++|+|++|+.||...........    +............++..+
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l  282 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNESPALQSGHWSEYF  282 (348)
T ss_dssp             CCCCSCGGGCCHHHHHTTSSCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSCCCCCCCTTSCHHH
T ss_pred             CcccCCcceeCHhhhccccCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HHhcCCCCCCCCCCCHHH
Confidence            3457999999999985   3344 4569999999999999999999987654333222    222222223334689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      .+||.+||..||.+|||+.++++||||....+.
T Consensus       283 ~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~  315 (348)
T 1u5q_A          283 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP  315 (348)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred             HHHHHHHcccChhhCcCHHHHhhChhhhccCCc
Confidence            999999999999999999999999999765543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.5e-35  Score=257.48  Aligned_cols=173  Identities=30%  Similarity=0.454  Sum_probs=126.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++ ...+||+|||+++.......
T Consensus       218 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~  297 (419)
T 3i6u_A          218 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL  297 (419)
T ss_dssp             EECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----
T ss_pred             EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc
Confidence            677755 8877765433         467899999999999999999999999997543 23599999999986655544


Q ss_pred             CCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCCCCH
Q 024572           70 PKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQ  145 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  145 (265)
                      ....+||+.|+|||++.+  ....+.++|||||||++|+|++|+.||............+.   ......  ..+..+++
T Consensus       298 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~  374 (419)
T 3i6u_A          298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT---SGKYNFIPEVWAEVSE  374 (419)
T ss_dssp             -------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH---TTCCCCCHHHHTTSCH
T ss_pred             ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh---cCCCCCCchhhcccCH
Confidence            556679999999999864  22234569999999999999999999987654433333222   222211  12246789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .+.+||.+||..||.+|||+.++++||||+.
T Consensus       375 ~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          375 KALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            9999999999999999999999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.4e-34  Score=239.05  Aligned_cols=175  Identities=32%  Similarity=0.480  Sum_probs=136.2

Q ss_pred             Cccccc-chHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++.+ +|.+++..+         .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||++......   
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTEE
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCC--EEEeeCCCccccCCCcch
Confidence            577755 787776533         34778899999999999999999999999987765  999999998744322   


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .......+++.|+|||++.+..+.+.++||||||+++|+|++|+.||............   ........+.+..++..+
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  238 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAP  238 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH---HHTTCTTSTTGGGSCHHH
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---hhhcccccCchhhcCHHH
Confidence            12234568999999999988776566799999999999999999999876543222221   122222233345689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      .+||.+||..||.+|||+.++++||||++....
T Consensus       239 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          239 LALLHKILVENPSARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred             HHHHHHHCCCCchhCCCHHHHhcCccccChhhc
Confidence            999999999999999999999999999876543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.9e-34  Score=240.47  Aligned_cols=174  Identities=31%  Similarity=0.541  Sum_probs=136.8

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.........
T Consensus       103 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~  180 (298)
T 1phk_A          103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKL  180 (298)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCCB
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCc--EEEecccchhhcCCCccc
Confidence            68886 49999987653         3677899999999999999999999999988776  999999999765554444


Q ss_pred             CCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCC
Q 024572           71 KSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHI  143 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  143 (265)
                      ....+++.|+|||++.+     ....+.++||||||+++|+|++|+.||..........    .+......  .+.+..+
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  256 (298)
T 1phk_A          181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR----MIMSGNYQFGSPEWDDY  256 (298)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCCTTTGGGS
T ss_pred             ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHH----HHhcCCcccCccccccc
Confidence            55679999999999852     2223456999999999999999999998765433222    22222222  2333468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +..+.+||.+||..||.+|||+.++++||||++....
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  293 (298)
T 1phk_A          257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE  293 (298)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC--
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccch
Confidence            9999999999999999999999999999999876543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=8.3e-35  Score=253.72  Aligned_cols=172  Identities=22%  Similarity=0.310  Sum_probs=129.1

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhc-CceecCCCcCcEEEcCCC-------------------
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSP-------------------   49 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~-------------------   49 (265)
                      ||+++++|.+++..+.           ++.+++.+|.|||++ ||+||||||+|||++.++                   
T Consensus       124 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  203 (397)
T 1wak_A          124 FEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAP  203 (397)
T ss_dssp             ECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC--------
T ss_pred             EeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCC
Confidence            7899888888877653           377889999999998 999999999999998653                   


Q ss_pred             ----------------------------CCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHH
Q 024572           50 ----------------------------APRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCG  101 (265)
Q Consensus        50 ----------------------------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  101 (265)
                                                  ...+||+|||+++....  ......||+.|+|||++.+..++ .++||||||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG  280 (397)
T 1wak_A          204 PPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIGSGYN-TPADIWSTA  280 (397)
T ss_dssp             -------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB--CSCSCCSCGGGCCHHHHHTSCCC-THHHHHHHH
T ss_pred             CCCCCccccCCcccccccccccccccccccceEeccccccccccc--cCccCCCCCcccCChhhcCCCCC-cHHHHHHHH
Confidence                                        02499999999875433  23455799999999999987775 459999999


Q ss_pred             HHHHHHHhCCCCCCCCCChH------HHHHHHHHHhhh--------ccc----------------------------CCC
Q 024572          102 VTLYVMLVGAYPFEDQEDPK------NFRKTISRIMAV--------QYK----------------------------IPD  139 (265)
Q Consensus       102 ~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~--------~~~----------------------------~~~  139 (265)
                      |++|+|++|+.||.......      ....+.......        .+.                            ...
T Consensus       281 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (397)
T 1wak_A          281 CMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEW  360 (397)
T ss_dssp             HHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCC
T ss_pred             HHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhccc
Confidence            99999999999997654321      111111110000        000                            000


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ....+..+.+||.+||..||.+|||+.++++||||+
T Consensus       361 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          361 SQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             CHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             chhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence            112345688999999999999999999999999996

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.4e-34  Score=238.14  Aligned_cols=167  Identities=32%  Similarity=0.553  Sum_probs=130.9

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++..... ...
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~--~~l~Dfg~~~~~~~-~~~  164 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPS-SRR  164 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSC--EEECSCCEESCC------
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCC--EEEEeccccccCCc-ccc
Confidence            678875 8888876543         4678899999999999999999999999987776  99999998864332 223


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||++.+..+. .++||||||+++|+|++|+.||........    ...+.......+  ..++..+.+|
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~l  237 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQET----YKRISRVEFTFP--DFVTEGARDL  237 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCCC--TTSCHHHHHH
T ss_pred             cccCCCCCccCHhHhccCCCC-ccchhHhHHHHHHHHHHCCCCCCCCcHHHH----HHHHHhCCCCCC--CcCCHHHHHH
Confidence            445789999999999887665 459999999999999999999987543322    223333333333  3589999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|||+.++++||||+..
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HHHHhccChhhCCCHHHHhhCccccCC
Confidence            999999999999999999999999643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=8.1e-34  Score=237.83  Aligned_cols=169  Identities=21%  Similarity=0.358  Sum_probs=131.0

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcC--ceecCCCcCcEEEc-CCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++|  |+||||||+|||++ .++.  +||+|||++..... 
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~--~kl~Dfg~~~~~~~-  184 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGLATLKRA-  184 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSC--EEECCTTGGGGCCT-
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCC--EEEeeCCCcccccc-
Confidence            688855 9999997643         3677899999999999  99999999999997 4444  99999999864332 


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      .......+++.|+|||++.+. + +.++|||||||++|+|++|+.||............   +.............++.+
T Consensus       185 ~~~~~~~~t~~y~aPE~~~~~-~-~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l  259 (290)
T 1t4h_A          185 SFAKAVIGTPEFMAPEMYEEK-Y-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR---VTSGVKPASFDKVAIPEV  259 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGTC-C-CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH---HTTTCCCGGGGGCCCHHH
T ss_pred             cccccccCCcCcCCHHHHhcc-C-CCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH---HhccCCccccCCCCCHHH
Confidence            223345689999999988753 4 45699999999999999999999876654433322   222222222233567899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+||.+||..||.+|||+.++++||||+..
T Consensus       260 ~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          260 KEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            999999999999999999999999999753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=8.8e-34  Score=244.21  Aligned_cols=173  Identities=23%  Similarity=0.285  Sum_probs=130.1

Q ss_pred             CcccccchHHHHH-------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVM-------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~-------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.++|.+++.       ...++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++....  .....
T Consensus       108 ~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~--~~~~~  183 (353)
T 3coi_A          108 MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHADA--EMTGY  183 (353)
T ss_dssp             EECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCC--EEECSTTCTTC----------
T ss_pred             eccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCc--EEEeecccccCCCC--Ccccc
Confidence            6777777776543       3345788999999999999999999999999988775  99999999875432  23345


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh--------------------
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV--------------------  133 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------------  133 (265)
                      .+|+.|+|||++.+....+.++|||||||++|+|++|+.||.+......+..+.......                    
T Consensus       184 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T 3coi_A          184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL  263 (353)
T ss_dssp             CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTS
T ss_pred             ccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhC
Confidence            789999999999874444566999999999999999999998876544443333211000                    


Q ss_pred             -c---cc-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          134 -Q---YK-IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       134 -~---~~-~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                       .   .. ......+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          264 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             CBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             cCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence             0   00 01123578999999999999999999999999999999754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=6.7e-35  Score=248.33  Aligned_cols=166  Identities=19%  Similarity=0.296  Sum_probs=127.2

Q ss_pred             Cccccc-chHHHHHHh------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLE------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..+            .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus       140 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQD  217 (332)
T ss_dssp             EECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECSCC
T ss_pred             EEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCC--EEEeecCcccccccc
Confidence            688876 999998753            34678899999999999999999999999987775  999999999755433


Q ss_pred             C-------------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc
Q 024572           68 S-------------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ  134 (265)
Q Consensus        68 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  134 (265)
                      .             ......||+.|+|||++.+..++ .++|||||||++|+|++|..|+..      ............
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~~~~~~~------~~~~~~~~~~~~  290 (332)
T 3qd2_B          218 EEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYS-HKVDIFSLGLILFELLYSFSTQME------RVRIITDVRNLK  290 (332)
T ss_dssp             --------------CCCSCC-CGGGSCHHHHHCCCCC-THHHHHHHHHHHHHHHSCCCCHHH------HHHHHHHHHTTC
T ss_pred             hhhccccccccccccccccCCCcCccChHHhcCCCCc-chhhHHHHHHHHHHHHHcCCChhH------HHHHHHHhhccC
Confidence            1             22345699999999999887765 559999999999999998766421      122222222221


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .. ......++.+.+||.+||..||.+|||+.++++||||++
T Consensus       291 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          291 FP-LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             CC-HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             CC-cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            11 111235678899999999999999999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4.7e-35  Score=262.36  Aligned_cols=171  Identities=29%  Similarity=0.520  Sum_probs=135.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCC-CCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~-~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.. ..+.+||+|||+++.......
T Consensus       105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  184 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK  184 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence            677754 8988886543         47789999999999999999999999999532 233599999999976554444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+ .+ +.++|||||||++|+|++|+.||.+......+    ..+....+  ..+.+..+++.+
T Consensus       185 ~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  258 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHG-TY-DEKCDVWSTGVILYILLSGCPPFNGANEYDIL----KKVEKGKYTFELPQWKKVSESA  258 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHT-CC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCSGGGGGSCHHH
T ss_pred             cccCCCCccccCceeecC-CC-CCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHcCCCCCCCcccccCCHHH
Confidence            445579999999999976 44 45699999999999999999999886543332    23333332  334455789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||.+|||+.++++||||+..
T Consensus       259 ~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          259 KDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            999999999999999999999999999743

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2e-34  Score=259.53  Aligned_cols=172  Identities=31%  Similarity=0.501  Sum_probs=138.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-CcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++. ..+||+|||+++.......
T Consensus       125 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  204 (504)
T 3q5i_A          125 TEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK  204 (504)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc
Confidence            788865 9988887654         4778899999999999999999999999987653 2599999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+ .+ +.++||||+||++|+|++|..||.+......    +..+....+..  +.+..+++.+
T Consensus       205 ~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~  278 (504)
T 3q5i_A          205 LRDRLGTAYYIAPEVLKK-KY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDI----IKKVEKGKYYFDFNDWKNISDEA  278 (504)
T ss_dssp             BCCCCSCTTTCCHHHHTT-CB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCHHHHTTSCHHH
T ss_pred             cccccCCcCCCCHHHhcc-CC-CchHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCccccCCCCHHH
Confidence            556689999999999874 45 4569999999999999999999988654333    23333333322  2335689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ++||.+||..||.+|||+.++++||||++..
T Consensus       279 ~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          279 KELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             HHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            9999999999999999999999999997544

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=8.8e-34  Score=250.86  Aligned_cols=170  Identities=25%  Similarity=0.381  Sum_probs=126.6

Q ss_pred             CcccccchHHHHHHhc----------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-----------CCcE
Q 024572            1 MQLGVSSLSEFVMLEG----------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-----------APRL   53 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-----------~~~v   53 (265)
                      ||+++++|.+++....                ++.+++.+|.|||++||+||||||+|||++..+           ...+
T Consensus        88 ~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           88 LELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             ECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             EecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence            7999999999987542                467889999999999999999999999997532           3369


Q ss_pred             EEeccCCcccCCCCCC-----CCCCcCCCCCcccccccCC------cCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChH
Q 024572           54 KICDFGYSKSSLLHSR-----PKSTVGTPAYIAPEVLSRR------EYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPK  121 (265)
Q Consensus        54 kl~Dfg~a~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~  121 (265)
                      ||+|||+++.......     .....||+.|+|||++.+.      ...+.++|||||||++|+|++ |+.||.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            9999999975543221     2234799999999999751      233566999999999999999 999997654322


Q ss_pred             HHHHHHHHHhhhcccCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          122 NFRKTISRIMAVQYKIPDY-----VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                        ...+    ......+..     ..++.++.+||.+||..||.+|||+.++++||||..
T Consensus       248 --~~i~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          248 --SNII----RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             --HHHH----HTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             --HHHh----cCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence              1111    222222211     124578999999999999999999999999999964

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=6e-34  Score=243.17  Aligned_cols=175  Identities=24%  Similarity=0.373  Sum_probs=129.4

Q ss_pred             Cccccc-chHHHHHH---------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVML---------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~---------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.++...         ..++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus       103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV--VKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCTTC---------
T ss_pred             EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCc--EEEEeCCCceeecCCccc
Confidence            677777 45555432         234778999999999999999999999999987775  999999998754332 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh---------------hc
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA---------------VQ  134 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------~~  134 (265)
                      .....+++.|+|||++.+....+.++|||||||++|+|++|+.||..................               ..
T Consensus       181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG  260 (331)
T ss_dssp             ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred             cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence            334578999999999987644566799999999999999999999887665544443322110               00


Q ss_pred             ccCCC----------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 YKIPD----------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 ~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ...+.          ...+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            01111          12578999999999999999999999999999999754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.9e-34  Score=252.23  Aligned_cols=172  Identities=27%  Similarity=0.429  Sum_probs=125.4

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcC---CCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG---SPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~---~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.   .+..++||+|||+++.....
T Consensus        97 ~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A           97 IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             EECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             EECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence            7999999999997653          3677899999999999999999999999953   33345899999999755432


Q ss_pred             ----CCCCCCcCCCCCcccccccCC--cCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc-CCC
Q 024572           68 ----SRPKSTVGTPAYIAPEVLSRR--EYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK-IPD  139 (265)
Q Consensus        68 ----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~  139 (265)
                          .......||+.|+|||++.+.  ...+.++|||||||++|+|++ |..||........  ...  ....... ...
T Consensus       177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--~~~--~~~~~~~~~~~  252 (432)
T 3p23_A          177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NIL--LGACSLDCLHP  252 (432)
T ss_dssp             ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--HHH--TTCCCCTTSCT
T ss_pred             CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--HHH--hccCCccccCc
Confidence                122345699999999999742  223456999999999999999 8999965433211  111  1111111 111


Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          140 YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       140 ~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ....+..+++||.+||..||.+|||+.++++||||..
T Consensus       253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            1223456889999999999999999999999999964

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=8.8e-34  Score=243.43  Aligned_cols=183  Identities=27%  Similarity=0.459  Sum_probs=139.1

Q ss_pred             Cccccc-chHHH------HH-----------HhccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLGVS-SLSEF------VM-----------LEGSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~~~-sL~~~------~~-----------~~~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||++.+ +|.++      +.           ...++.+++.++.|||+ +||+||||||+||+++.++.  +||+|||++
T Consensus       122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~  199 (348)
T 2pml_X          122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR--VKLSDFGES  199 (348)
T ss_dssp             EECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSC--EEECCCTTC
T ss_pred             EeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCc--EEEeccccc
Confidence            567765 77766      32           23357789999999999 99999999999999987775  999999998


Q ss_pred             ccCCCCCCCCCCcCCCCCcccccccCC-cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCC
Q 024572           62 KSSLLHSRPKSTVGTPAYIAPEVLSRR-EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY  140 (265)
Q Consensus        62 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (265)
                      ...... ......++..|+|||++.+. .+...++|||||||++|+|++|+.||.........   ...+.......+..
T Consensus       200 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~i~~~~~~~~~~  275 (348)
T 2pml_X          200 EYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL---FNNIRTKNIEYPLD  275 (348)
T ss_dssp             EECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH---HHHHTSCCCCCCCS
T ss_pred             cccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHHhccCcCCccc
Confidence            754332 33445799999999999876 44443699999999999999999999876653222   22233333333311


Q ss_pred             -----------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCChhhHHHHHHH
Q 024572          141 -----------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAI  189 (265)
Q Consensus       141 -----------------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~~~~~~~~~~  189 (265)
                                       ..++..+.+||.+||..||.+|||+.++++||||+......+......+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~~~~~~~~  341 (348)
T 2pml_X          276 RNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKEL  341 (348)
T ss_dssp             SSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHHHHHHHHH
T ss_pred             hhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHHHHHHHHH
Confidence                             4688999999999999999999999999999999876655554444433

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.3e-33  Score=235.92  Aligned_cols=166  Identities=29%  Similarity=0.554  Sum_probs=134.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++...... ..
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~-~~  169 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE--LKIADFGWSVHAPSL-RR  169 (284)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCC--EEECCCTTCEECSSS-CB
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCC--EEEecccccccCccc-cc
Confidence            688865 9999887654         3677899999999999999999999999987775  999999998644322 23


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||++.+..++ .++||||||+++|+|++|+.||........    ...+.......+  ..++..+++|
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~l  242 (284)
T 2vgo_A          170 RTMCGTLDYLPPEMIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTET----HRRIVNVDLKFP--PFLSDGSKDL  242 (284)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBC-TTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTCCCCC--TTSCHHHHHH
T ss_pred             ccccCCCCcCCHHHhccCCCC-cccchhhHHHHHHHHHHCCCCCCCCCHhHH----HHHHhccccCCC--CcCCHHHHHH
Confidence            445789999999999887765 459999999999999999999987654332    222333333333  4689999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      |.+||..||.+|||+.++++||||+.
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence            99999999999999999999999964

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=6.9e-35  Score=256.40  Aligned_cols=160  Identities=16%  Similarity=0.164  Sum_probs=127.5

Q ss_pred             CcccccchHHHHH----------------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVSSLSEFVM----------------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~sL~~~~~----------------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      |+++.++|.+++.                +..++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus       184 ~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~--~kL~DFG~a~~~  261 (413)
T 3dzo_A          184 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG--VFLTGFEHLVRD  261 (413)
T ss_dssp             EECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCGGGCEET
T ss_pred             eehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCe--EEEEeccceeec
Confidence            5667788888883                2234588999999999999999999999999998876  999999998754


Q ss_pred             CCCCCCCCCcCCCCCcccccc----------cCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc
Q 024572           65 LLHSRPKSTVGTPAYIAPEVL----------SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ  134 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  134 (265)
                      ...  ....+| +.|+|||++          .+..+ +.++|||||||++|+|++|+.||.........          .
T Consensus       262 ~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~----------~  327 (413)
T 3dzo_A          262 GAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLM-TFAFDTWTLGLAIYWIWCADLPNTDDAALGGS----------E  327 (413)
T ss_dssp             TEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEE-CHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS----------G
T ss_pred             CCc--cccCCC-CceeCchhhhccccccccccCcCC-CchhhHHHHHHHHHHHHHCCCCCCCcchhhhH----------H
Confidence            332  344567 999999999          33334 45699999999999999999999775432211          1


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ........+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       328 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          328 WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             GGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            112233468899999999999999999999999999999963

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.9e-34  Score=247.00  Aligned_cols=175  Identities=30%  Similarity=0.510  Sum_probs=113.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..+.           ++.+++.+|.|||++||+||||||+|||++.++ .+.+||+|||+++.... 
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~-  183 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-  183 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc-
Confidence            788866 9999987653           367789999999999999999999999997533 34599999999975432 


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh--hcccCCCCCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--VQYKIPDYVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  145 (265)
                      .......+|+.|+|||++.+..++ .++|||||||++|+|++|+.||...............+..  .....+.+..++.
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (336)
T 3fhr_A          184 NALQTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE  262 (336)
T ss_dssp             --------------------CHHH-HHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCH
T ss_pred             cccccCCCCcCccChhhhCCCCCC-chhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCH
Confidence            233445789999999999776664 5599999999999999999999775543322222222222  2223344457899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+++||.+||..||.+|||+.++++||||++.
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          263 DAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            99999999999999999999999999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=5.2e-34  Score=246.93  Aligned_cols=176  Identities=21%  Similarity=0.285  Sum_probs=128.4

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhc-CceecCCCcCcEEEcCCC----CCcEEEeccCCcccC
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSP----APRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~----~~~vkl~Dfg~a~~~   64 (265)
                      ||+++++|.+++....           ++.+++.+|.|||++ ||+||||||+|||++..+    ...+||+|||+++..
T Consensus       109 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~  188 (373)
T 1q8y_A          109 FEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY  188 (373)
T ss_dssp             ECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred             EecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccccc
Confidence            6888889999987632           367889999999998 999999999999995322    225999999999754


Q ss_pred             CCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHHHHhhh-----
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP------KNFRKTISRIMAV-----  133 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~-----  133 (265)
                      ..  ......+|+.|+|||++.+..++ .++|||||||++|+|++|+.||......      ..+..+.......     
T Consensus       189 ~~--~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  265 (373)
T 1q8y_A          189 DE--HYTNSIQTREYRSPEVLLGAPWG-CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLL  265 (373)
T ss_dssp             TB--CCCSCCSCGGGCCHHHHHTCCCC-THHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHH
T ss_pred             CC--CCCCCCCCccccCcHHHhCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHH
Confidence            33  23445789999999999887765 5599999999999999999999865421      1111211111000     


Q ss_pred             -------------------------------cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          134 -------------------------------QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       134 -------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                                                     .........++..+.+||.+||..||.+|||+.++++||||++...
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          266 RNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             HHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                                           0000111134577899999999999999999999999999987543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=7.5e-34  Score=239.64  Aligned_cols=170  Identities=33%  Similarity=0.559  Sum_probs=133.6

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEE---cCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll---~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..++         ++.+++.++.|||++||+||||||+||++   +.++  .+||+|||+++.... 
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~--~~kl~Dfg~~~~~~~-  161 (304)
T 2jam_A           85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS--KIMITDFGLSKMEQN-  161 (304)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTC--CEEBCSCSTTCCCCC-
T ss_pred             EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCC--CEEEccCCcceecCC-
Confidence            688854 9999887654         36778999999999999999999999999   4444  499999999864322 


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  145 (265)
                      .......+++.|+|||++.+..++ .++|||||||++|+|++|+.||.........    ..+......  .+.+..++.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~  236 (304)
T 2jam_A          162 GIMSTACGTPGYVAPEVLAQKPYS-KAVDCWSIGVITYILLCGYPPFYEETESKLF----EKIKEGYYEFESPFWDDISE  236 (304)
T ss_dssp             BTTHHHHSCCCBCCTTTBSSCSCC-HHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHCCCCCCTTTTTTSCH
T ss_pred             CccccccCCCCccChHHhccCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHcCCCCCCccccccCCH
Confidence            222334689999999999887664 5699999999999999999999876543322    222222222  233456899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      .+.+||.+||..||.+|||+.++++||||....
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            999999999999999999999999999997653

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=4e-34  Score=242.35  Aligned_cols=176  Identities=23%  Similarity=0.273  Sum_probs=132.2

Q ss_pred             CcccccchHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC----C
Q 024572            1 MQLGVSSLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH----S   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~----~   68 (265)
                      ||++.++|.+++...        .++.+++.++.|||++||+||||||+||+++..+ +.+||+|||+++.....    .
T Consensus       101 ~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~kl~Dfg~~~~~~~~~~~~~  179 (320)
T 2i6l_A          101 QEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED-LVLKIGDFGLARIMDPHYSHKG  179 (320)
T ss_dssp             EECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-TEEEECCCTTCBCC--------
T ss_pred             eeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CeEEEccCccccccCCCccccc
Confidence            688888998887542        2477899999999999999999999999997443 24999999998754322    1


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh-----------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-----------------  131 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------------  131 (265)
                      ......++..|+|||++.+....+.++|||||||++|+|++|+.||.+...............                 
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (320)
T 2i6l_A          180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVY  259 (320)
T ss_dssp             CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHH
T ss_pred             ccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccc
Confidence            223345789999999987644446679999999999999999999988765444333332110                 


Q ss_pred             -hhcccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          132 -AVQYKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       132 -~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                       ......+      ....++..+++||.+||..||.+|||+.++++||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          260 IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             HHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             ccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence             0000001      113578999999999999999999999999999999754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.7e-34  Score=236.83  Aligned_cols=168  Identities=25%  Similarity=0.499  Sum_probs=112.4

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-S   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~   68 (265)
                      ||++.+ +|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++...... .
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~--~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN--IKIADFGLATQLKMPHE  167 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCC--EEECCCTTCEECC----
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC--EEEEeecceeeccCCCC
Confidence            678854 8988887542          3678899999999999999999999999987765  999999998754322 2


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......+++.|+|||++.+..+. .++|||||||++|+|++|+.||.........    ..+......  .+..++..+.
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~  240 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAHG-LESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----NKVVLADYE--MPSFLSIEAK  240 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSSCCC--CCTTSCHHHH
T ss_pred             cceeccCCCCcCCcchhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCChhHHHHH----HHHhhcccC--CccccCHHHH
Confidence            22345689999999999877665 4599999999999999999999876543222    122222222  2335889999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +||.+||..||.+|||+.++++||||...
T Consensus       241 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          241 DLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             HHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            99999999999999999999999999764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3.2e-34  Score=239.23  Aligned_cols=171  Identities=31%  Similarity=0.526  Sum_probs=131.2

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC--CCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP--APRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~--~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++  ...+||+|||++.......
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~  166 (283)
T 3bhy_A           87 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN  166 (283)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---
T ss_pred             EeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC
Confidence            68885 59999987543         367789999999999999999999999997665  2259999999997655444


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  146 (265)
                      ......+++.|+|||++.+..+. .++||||||+++|+|++|+.||.........    ..+.......+  .+..++..
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  241 (283)
T 3bhy_A          167 EFKNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGETKQETL----TNISAVNYDFDEEYFSNTSEL  241 (283)
T ss_dssp             -----CCCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHTTCCCCCHHHHTTCCHH
T ss_pred             cccccCCCcCccCcceecCCCCC-cchhhhhHHHHHHHHHHCCCCCCCcchHHHH----HHhHhcccCCcchhcccCCHH
Confidence            44556799999999999877765 5599999999999999999999876543322    22222222221  12357889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      +.+||.+||..||.+|||+.++++||||+.
T Consensus       242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            999999999999999999999999999964

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1e-33  Score=236.23  Aligned_cols=166  Identities=17%  Similarity=0.157  Sum_probs=127.0

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCC-----------------
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-----------------   49 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-----------------   49 (265)
                      ||++.+ +|.+++...             .++.+++.+|.|||++||+||||||+|||++.++                 
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            688855 999998764             2367889999999999999999999999997442                 


Q ss_pred             CCcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHH
Q 024572           50 APRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISR  129 (265)
Q Consensus        50 ~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~  129 (265)
                      ...+||+|||++......   ....+++.|+|||++.+....+.++|||||||++|+|++|.+++....   ....    
T Consensus       170 ~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~----  239 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHE----  239 (289)
T ss_dssp             CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHH----
T ss_pred             ceEEEEcccccccccCCc---cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHH----
Confidence            225999999998754332   334689999999999876555567999999999999999988775432   1111    


Q ss_pred             HhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          130 IMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +.... ....+..+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       240 ~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          240 IRQGR-LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             HHTTC-CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             HHcCC-CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            11111 122334689999999999999999999999999999999764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.8e-33  Score=240.64  Aligned_cols=168  Identities=33%  Similarity=0.490  Sum_probs=135.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..... ..
T Consensus       120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~  197 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDGER  197 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECCSTTCC
T ss_pred             EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCC--EEEeeccCceecccCccc
Confidence            688874 8998887644         3678899999999999999999999999988765  999999999755422 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....+++.|+|||++.+..+. .++|||||||++|+|++|+.||........    ...+.......+  ..++..+.+
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~  270 (335)
T 2owb_A          198 KKVLCGTPNYIAPEVLSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKNEYSIP--KHINPVAAS  270 (335)
T ss_dssp             BCCCCSCCSSCCHHHHHTSCBC-THHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCCC--TTSCHHHHH
T ss_pred             ccccCCCccccCHHHhccCCCC-chhhHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHhcCCCCCC--ccCCHHHHH
Confidence            3345699999999999887764 559999999999999999999987554332    222233333333  368899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|||+.++++||||...
T Consensus       271 li~~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          271 LIQKMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHHHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=9.8e-34  Score=244.47  Aligned_cols=172  Identities=26%  Similarity=0.399  Sum_probs=130.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++...+         ++.+++.++.|||++ ||+||||||+|||++.++.  +||+|||+++.... ..
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~-~~  186 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLID-SM  186 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC--EEECCCCCCHHHHH-HC
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCC--EEEEECCCCccccc-cc
Confidence            788865 9999988653         366789999999996 9999999999999988776  99999999864322 12


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHH-------------------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFR-------------------------  124 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~-------------------------  124 (265)
                      .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||..........                         
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          187 ANSFVGTRSYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             ----CCCCTTCCHHHHTTCCCS-HHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             ccCCCCCCCeECHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence            3345789999999999887765 55999999999999999999997654322111                         


Q ss_pred             -------------HHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          125 -------------KTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       125 -------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                   .....+............++..+.+||.+||..||.+|||+.++++||||+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence                         1111111111111122347889999999999999999999999999999975

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.7e-33  Score=237.26  Aligned_cols=171  Identities=30%  Similarity=0.484  Sum_probs=134.3

Q ss_pred             CcccccchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--
Q 024572            1 MQLGVSSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--   67 (265)
                      ||++.++|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++......  
T Consensus        87 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~~~~  164 (305)
T 2wtk_C           87 MEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT--LKISALGVAEALHPFAA  164 (305)
T ss_dssp             EECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCS
T ss_pred             ehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCc--EEeeccccccccCcccc
Confidence            688888877777653           24668899999999999999999999999987765  999999998754322  


Q ss_pred             -CCCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           68 -SRPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                       .......+++.|+|||++.+.. ..+.++|||||||++|+|++|+.||.......    ....+.......  +..++.
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~i~~~~~~~--~~~~~~  238 (305)
T 2wtk_C          165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK----LFENIGKGSYAI--PGDCGP  238 (305)
T ss_dssp             SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHCCCCC--CSSSCH
T ss_pred             ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH----HHHHHhcCCCCC--CCccCH
Confidence             1223446899999999987643 23556999999999999999999998754322    223333333333  346899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      .+.+||.+||..||.+|||+.++++||||++..+
T Consensus       239 ~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          239 PLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            9999999999999999999999999999986544

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.7e-33  Score=237.20  Aligned_cols=171  Identities=26%  Similarity=0.376  Sum_probs=128.8

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||+++++|.+++..+.         ++.+++.+|.|||++||+||||||+|||++. +  .+||+|||+++.......  
T Consensus       107 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~--~~kL~Dfg~~~~~~~~~~~~  183 (313)
T 3cek_A          107 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSV  183 (313)
T ss_dssp             ECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T--EEEECCCSSSCC--------
T ss_pred             EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-C--eEEEeeccccccccCccccc
Confidence            6878889999987654         3678899999999999999999999999964 3  499999999875433221  


Q ss_pred             -CCCCcCCCCCcccccccCC----------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           70 -PKSTVGTPAYIAPEVLSRR----------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        70 -~~~~~~~~~y~aPE~~~~~----------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                       .....+++.|+|||++.+.          ...+.++|||||||++|+|++|+.||........   .+...........
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~  260 (313)
T 3cek_A          184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIE  260 (313)
T ss_dssp             ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCCC
T ss_pred             cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhcccccC
Confidence             2234689999999998752          2334569999999999999999999987654322   2222233333333


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+...+..+.+||.+||..||.+|||+.++++||||+..
T Consensus       261 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            344568899999999999999999999999999999754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.9e-33  Score=234.87  Aligned_cols=168  Identities=33%  Similarity=0.468  Sum_probs=134.9

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~   69 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++..... ..
T Consensus        94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~  171 (294)
T 2rku_A           94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDGER  171 (294)
T ss_dssp             EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCSTTCC
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCC--EEEEeccCceecccCccc
Confidence            67887 48988887654         3677899999999999999999999999987765  999999998754422 22


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....+++.|+|||++.+..++ .++||||||+++|+|++|+.||........    ...+.......  +..++..+.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~  244 (294)
T 2rku_A          172 KKVLCGTPNYIAPEVLSKKGHS-FEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKNEYSI--PKHINPVAAS  244 (294)
T ss_dssp             BCCCCSCCSSCCHHHHTTSCBC-THHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTCCCC--CTTSCHHHHH
T ss_pred             cccccCCCCcCCcchhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhhccCCC--ccccCHHHHH
Confidence            3345689999999999877664 559999999999999999999987654332    22223333333  3368899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ||.+||..||.+|||+.++++||||...
T Consensus       245 li~~~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          245 LIQKMLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHHHcccChhhCcCHHHHhhChheecC
Confidence            9999999999999999999999999754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=4.8e-34  Score=242.84  Aligned_cols=174  Identities=30%  Similarity=0.446  Sum_probs=131.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....         ++.+++.+|.|||++||+||||||+|||++.++ ...+||+|||+++.......
T Consensus        93 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  172 (322)
T 2ycf_A           93 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL  172 (322)
T ss_dssp             EECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH
T ss_pred             EecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccc
Confidence            678855 8888775433         467889999999999999999999999997654 23599999999875433222


Q ss_pred             CCCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCH
Q 024572           70 PKSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQ  145 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  145 (265)
                      .....|++.|+|||++.+  ....+.++|||||||++|+|++|..||........+...+..   ......  .+..++.
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  249 (322)
T 2ycf_A          173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS---GKYNFIPEVWAEVSE  249 (322)
T ss_dssp             HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH---TCCCCCHHHHTTSCH
T ss_pred             cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh---CccccCchhhhhcCH
Confidence            223468999999999742  222345699999999999999999999876544333332221   111111  1235789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+.+||.+||..||.+|||+.++++||||+..
T Consensus       250 ~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             HHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            99999999999999999999999999999753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.1e-33  Score=238.85  Aligned_cols=165  Identities=30%  Similarity=0.464  Sum_probs=132.5

Q ss_pred             Ccccc--cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEc-CCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV--SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~--~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.  ++|.+++..++         ++.+++.+|.|||++||+||||||+|||++ .++  .+||+|||+++..... 
T Consensus       127 ~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~~kL~Dfg~~~~~~~~-  203 (320)
T 3a99_A          127 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDT-  203 (320)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT--EEEECCCTTCEECCSS-
T ss_pred             EEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC--CEEEeeCccccccccc-
Confidence            56665  58999887654         366889999999999999999999999998 444  4999999998754432 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......+|+.|+|||++.+..+.+.++|||||||++|+|++|+.||....      ..    ....  ......+++.+.
T Consensus       204 ~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~----~~~~--~~~~~~~~~~~~  271 (320)
T 3a99_A          204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EI----IRGQ--VFFRQRVSSECQ  271 (320)
T ss_dssp             CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HH----HHCC--CCCSSCCCHHHH
T ss_pred             cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hh----hccc--ccccccCCHHHH
Confidence            23345699999999999877776677999999999999999999996521      11    1111  223346899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +||.+||..||.+|||+.++++||||+.....
T Consensus       272 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~  303 (320)
T 3a99_A          272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP  303 (320)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence            99999999999999999999999999876543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=5.5e-34  Score=239.84  Aligned_cols=177  Identities=25%  Similarity=0.303  Sum_probs=127.2

Q ss_pred             Ccccc-cchHHHHHH-----------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGV-SSLSEFVML-----------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~-~sL~~~~~~-----------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||++. ++|.+++..                 ..++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~  169 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS--VQIADFGVSA  169 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC--EEECCCHHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCC--EEEEeccchh
Confidence            67884 589988864                 123678899999999999999999999999987765  9999999986


Q ss_pred             cCCCCC------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc--
Q 024572           63 SSLLHS------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ--  134 (265)
Q Consensus        63 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--  134 (265)
                      ......      ......+++.|+|||++.+....+.++|||||||++|+|++|+.||....................  
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET  249 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence            443221      123346899999999987633335669999999999999999999988665443332221100000  


Q ss_pred             --ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          135 --YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       135 --~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                        ........++..+.+||.+||..||.+|||+.++++||||++...
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence              001122357889999999999999999999999999999976543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-33  Score=238.43  Aligned_cols=172  Identities=24%  Similarity=0.339  Sum_probs=128.2

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-   67 (265)
                      ||++.+ +|.+++....           ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||++...... 
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~  183 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRTV  183 (326)
T ss_dssp             EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC--EEECCCTTTC------
T ss_pred             EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCC--EEEeeCcCceecCcCc
Confidence            688866 9999987532           3677899999999999999999999999987765  999999998754322 


Q ss_pred             CCCCCCcCCCCCccccccc-----CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           68 SRPKSTVGTPAYIAPEVLS-----RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~-----~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      .......+++.|+|||++.     +..+ +.++|||||||++|+|++|+.||..........    .+............
T Consensus       184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~  258 (326)
T 2x7f_A          184 GRRNTFIGTPYWMAPEVIACDENPDATY-DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKK  258 (326)
T ss_dssp             -------CCGGGCCHHHHC--------C-CTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSCSC
T ss_pred             cccccccCCccccChhhhccccccCcCC-CccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH----HhhcCccccCCccc
Confidence            1223456899999999987     3334 455999999999999999999997765432222    22222222223346


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      ++..+.+||.+||..||.+|||+.++++||||+....
T Consensus       259 ~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          259 WSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             cCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence            8999999999999999999999999999999986543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.8e-33  Score=233.81  Aligned_cols=172  Identities=23%  Similarity=0.340  Sum_probs=125.8

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--   67 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.....  
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~  171 (303)
T 1zy4_A           94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLD  171 (303)
T ss_dssp             EECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCCCCCSCTTC---
T ss_pred             EecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCC--EEEeeCcchhhcccccc
Confidence            688855 9999987543          3678899999999999999999999999987775  999999998754321  


Q ss_pred             -------------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc
Q 024572           68 -------------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ  134 (265)
Q Consensus        68 -------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  134 (265)
                                   .......+++.|+|||++.+....+.++|||||||++|+|++   ||....   ........+....
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---~~~~~~~~~~~~~  245 (303)
T 1zy4_A          172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---ERVNILKKLRSVS  245 (303)
T ss_dssp             ----------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---HHHHHHHHHHSTT
T ss_pred             hhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---hHHHHHHhccccc
Confidence                         122344689999999999876444567999999999999998   554322   1122333333332


Q ss_pred             ccCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          135 YKIP--DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       135 ~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ...+  .....+..+.+||.+||..||.+|||+.++++||||+.....
T Consensus       246 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  293 (303)
T 1zy4_A          246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD  293 (303)
T ss_dssp             CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCHH
T ss_pred             cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCChH
Confidence            2222  233567789999999999999999999999999999866443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.1e-33  Score=234.17  Aligned_cols=174  Identities=23%  Similarity=0.332  Sum_probs=135.6

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... 
T Consensus       103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~  180 (314)
T 3com_A          103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH--AKLADFGVAGQLTDTMA  180 (314)
T ss_dssp             EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECBTTBS
T ss_pred             eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCC--EEEeecccchhhhhhcc
Confidence            688866 9999987432          3677899999999999999999999999987765  9999999986543322 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......+++.|+|||++.+..++. ++|||||||++|+|++|+.||............   .............++..+.
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~  256 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYNC-VADIWSLGITAIEMAEGKPPYADIHPMRAIFMI---PTNPPPTFRKPELWSDNFT  256 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCT-THHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSCCCCCSSGGGSCHHHH
T ss_pred             ccCccCCCCCccChhhcCCCCCCc-cccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCCCcccCCcccCCHHHH
Confidence            223456899999999998877654 499999999999999999999876543222111   1111112223345789999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +||.+||..||.+|||+.++++||||+.....
T Consensus       257 ~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~  288 (314)
T 3com_A          257 DFVKQCLVKSPEQRATATQLLQHPFVRSAKGV  288 (314)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCG
T ss_pred             HHHHHHccCChhhCcCHHHHHhCHHHhcCCcc
Confidence            99999999999999999999999999876543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=4.1e-33  Score=236.16  Aligned_cols=172  Identities=21%  Similarity=0.361  Sum_probs=122.9

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+++..+..+....          .++.+++.++.|||++ ||+||||||+||+++.++.  +||+|||++........
T Consensus       103 ~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~  180 (318)
T 2dyl_A          103 MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ--IKLCDFGISGRLVDDKA  180 (318)
T ss_dssp             ECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSC--EEECCCTTC--------
T ss_pred             EeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCC--EEEEECCCchhccCCcc
Confidence            688866666555432          2467789999999995 9999999999999987775  99999999875544444


Q ss_pred             CCCCcCCCCCcccccccC----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 PKSTVGTPAYIAPEVLSR----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .....+++.|+|||++..    ....+.++|||||||++|+|++|+.||............+  ........+....++.
T Consensus       181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  258 (318)
T 2dyl_A          181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--LQEEPPLLPGHMGFSG  258 (318)
T ss_dssp             ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH--HHSCCCCCCSSSCCCH
T ss_pred             ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH--hccCCCCCCccCCCCH
Confidence            445579999999999852    2223456999999999999999999998755433222211  1122223344446899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .+.+||.+||..||.+|||+.++++||||+.
T Consensus       259 ~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          259 DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            9999999999999999999999999999964

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=4e-34  Score=243.75  Aligned_cols=170  Identities=27%  Similarity=0.448  Sum_probs=111.5

Q ss_pred             CcccccchHHHHHH--------------hccccchHHHHHhhhhc-CceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGVSSLSEFVML--------------EGSVKMKPDIFFSSLSQ-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~sL~~~~~~--------------~~~~~~i~~~l~~lH~~-~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.++|.+++..              ..++.+++.++.|||++ ||+||||||+|||++.++.  +||+|||+++...
T Consensus       100 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~~~~~~  177 (327)
T 3aln_A          100 MELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN--IKLCDFGISGQLV  177 (327)
T ss_dssp             ECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE--EEECCCSSSCC--
T ss_pred             EeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC--EEEccCCCceecc
Confidence            78888888887763              12367789999999999 9999999999999987765  9999999997655


Q ss_pred             CCCCCCCCcCCCCCccccccc----CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc---ccCC
Q 024572           66 LHSRPKSTVGTPAYIAPEVLS----RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ---YKIP  138 (265)
Q Consensus        66 ~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~  138 (265)
                      .........|++.|+|||++.    +..+ +.++|||||||++|+|++|+.||.......   ..+..+....   ....
T Consensus       178 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~  253 (327)
T 3aln_A          178 DSIAKTRDAGCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGRFPYPKWNSVF---DQLTQVVKGDPPQLSNS  253 (327)
T ss_dssp             ----------------------------C-CSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCCCSCCCCCCCC
T ss_pred             cccccccCCCCccccCceeeccccCcCCC-CchhhHHHHHHHHHHHHHCCCCCCCcchHH---HHHHHHhcCCCCCCCCc
Confidence            444444457999999999984    3344 456999999999999999999997643211   1111111111   1111


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ....+++.+.+||.+||..||.+|||+.++++||||..
T Consensus       254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            12358899999999999999999999999999999963

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.7e-33  Score=232.47  Aligned_cols=173  Identities=26%  Similarity=0.350  Sum_probs=130.7

Q ss_pred             Ccccc-cchHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCC
Q 024572            1 MQLGV-SSLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++. ++|.+++....            ++.+++.++.|||++||+||||||+||+++. ++.  +||+|||+++....
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~--~kl~Dfg~~~~~~~  175 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV--LKISDFGTSKRLAG  175 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCC--EEECCTTTCEESCC
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCC--EEEeecccccccCC
Confidence            67884 59999887542            2567899999999999999999999999986 444  99999999875433


Q ss_pred             CC-CCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           67 HS-RPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        67 ~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .. ......+++.|+|||++.+.. ..+.++||||||+++|+|++|+.||...........   ...........+..++
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~  252 (295)
T 2clq_A          176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPESMS  252 (295)
T ss_dssp             -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH---HHHHHCCCCCCCTTSC
T ss_pred             CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH---hhccccccccccccCC
Confidence            22 233456899999999987643 235669999999999999999999976544322111   1111122223344689


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ..+.+||.+||..||.+|||+.++++||||+...
T Consensus       253 ~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          253 AEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            9999999999999999999999999999997543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.9e-33  Score=235.38  Aligned_cols=170  Identities=34%  Similarity=0.560  Sum_probs=133.6

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++ ...+||+|||++........
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~  179 (287)
T 2wei_A          100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK  179 (287)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred             EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence            67775 48888876543         367789999999999999999999999997643 23599999999876554444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  147 (265)
                      .....+++.|+|||++.+. + +.++||||||+++|+|++|+.||.+......    ...+.....  ..+.+..++..+
T Consensus       180 ~~~~~~~~~y~aPE~~~~~-~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T 2wei_A          180 MKDRIGTAYYIAPEVLRGT-Y-DEKCDVWSAGVILYILLSGTPPFYGKNEYDI----LKRVETGKYAFDLPQWRTISDDA  253 (287)
T ss_dssp             CSCHHHHHTTCCHHHHTTC-C-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCSGGGTTSCHHH
T ss_pred             cccccCcccccChHHhcCC-C-CCchhhHhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCchhhhhcCHHH
Confidence            4445688999999998764 4 4569999999999999999999987654322    222223322  233345689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      .+||.+||..||.+|||+.++++||||++
T Consensus       254 ~~li~~~l~~dp~~Rps~~ell~hp~~~~  282 (287)
T 2wei_A          254 KDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (287)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred             HHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence            99999999999999999999999999964

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=7.9e-34  Score=240.41  Aligned_cols=168  Identities=23%  Similarity=0.313  Sum_probs=126.9

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++. ++|.+++..++         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......  
T Consensus        95 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~  172 (311)
T 3ork_A           95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNS  172 (311)
T ss_dssp             EECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSC--EEECCCSCC---------
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCC--EEEeeccCcccccccccc
Confidence            78885 59999987654         3677899999999999999999999999988776  9999999987543321  


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCCCC
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHIS  144 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  144 (265)
                        ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+............    .....  .....++
T Consensus       173 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  247 (311)
T 3ork_A          173 VTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR----EDPIPPSARHEGLS  247 (311)
T ss_dssp             ---------CCTTCCHHHHHTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH----CCCCCHHHHSTTCC
T ss_pred             cccccccCcCcccCCHHHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc----CCCCCcccccCCCC
Confidence              22234689999999999887765 559999999999999999999987654333222221    11111  1123588


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ..+.+||.+||..||.+||++.+++.|+|++
T Consensus       248 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          248 ADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            9999999999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-33  Score=238.81  Aligned_cols=169  Identities=22%  Similarity=0.359  Sum_probs=129.6

Q ss_pred             Ccccc-cchHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEE----cCCCCCcEEEeccCCccc
Q 024572            1 MQLGV-SSLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLL----DGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll----~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++. ++|.+++....            ++.+++.+|.|||++||+||||||+|||+    +.++  .+||+|||+++.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~--~~kL~Dfg~a~~  165 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQS--VYKLTDFGAARE  165 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCE--EEEECCCTTCEE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCc--eEEEccCCCcee
Confidence            78885 59999887643            36778999999999999999999999998    4444  499999999986


Q ss_pred             CCCCCCCCCCcCCCCCccccccc--------CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc
Q 024572           64 SLLHSRPKSTVGTPAYIAPEVLS--------RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY  135 (265)
Q Consensus        64 ~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  135 (265)
                      ...........||+.|+|||++.        +..+ +.++|||||||++|+|++|+.||............+..+.....
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (319)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCB-CTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred             cCCCCceeecccCCCccCHHHhhhccccccccCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence            65555555667999999999986        3444 45599999999999999999999865554443444444333221


Q ss_pred             -------------------cCCCC----CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          136 -------------------KIPDY----VHISQDCRNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       136 -------------------~~~~~----~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                                         ..+..    ..++..+.+||.+||..||.+|||+.++++||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence                               11111    12345788999999999999999999999986

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.98  E-value=2.1e-32  Score=229.78  Aligned_cols=168  Identities=18%  Similarity=0.195  Sum_probs=128.1

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC---CcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA---PRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~---~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++...+          ++.+++.++.|||++||+||||||+|||++.++.   ..+||+|||+++.....
T Consensus        85 ~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           85 IDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             EEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            7899889999998643          3777899999999999999999999999975432   24999999999754432


Q ss_pred             C--------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC-
Q 024572           68 S--------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-  138 (265)
Q Consensus        68 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-  138 (265)
                      .        ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||......... .....+.......+ 
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~  242 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQS-RRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKYERIGEKKQSTPL  242 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHHHHHHHHHHHSCH
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCC-hHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHHHHHHhhccCccH
Confidence            2        12345699999999999887764 5699999999999999999999875432221 11111111111111 


Q ss_pred             --CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          139 --DYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       139 --~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                        ....+++.+.+||.+||..||.+|||+.++++
T Consensus       243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          243 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence              12357899999999999999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.98  E-value=1.5e-32  Score=231.56  Aligned_cols=169  Identities=26%  Similarity=0.320  Sum_probs=133.0

Q ss_pred             Cccccc-chHHHHHHh--------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE--------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~--------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~   70 (265)
                      ||++.+ +|.+++...        .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++....... ..
T Consensus        99 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~  176 (303)
T 3a7i_A           99 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKR  176 (303)
T ss_dssp             EECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECBTTBCCB
T ss_pred             EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCC--EEEeecccceecCcccccc
Confidence            677765 888877532        34778899999999999999999999999987765  9999999987544332 22


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ....+++.|+|||++.+..++ .++|||||||++|+|++|+.||..........    .+... ........++..+.+|
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~~l  250 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLF----LIPKN-NPPTLEGNYSKPLKEF  250 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHS-CCCCCCSSCCHHHHHH
T ss_pred             CccCCCcCccCHHHHhcCCCC-chhhhHHHHHHHHHHccCCCCCCCcCHHHHHH----HhhcC-CCCCCccccCHHHHHH
Confidence            345689999999999887765 45999999999999999999997754332221    11111 1222334689999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|||+.++++||||.+.
T Consensus       251 i~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          251 VEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            999999999999999999999999654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.98  E-value=1e-32  Score=234.49  Aligned_cols=171  Identities=20%  Similarity=0.302  Sum_probs=122.6

Q ss_pred             Cccccc-chHHHHHHhc---------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLEG---------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ +|.+++....               ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~--~kl~Dfg~a~~~  187 (323)
T 3qup_A          110 LPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMT--VCVADFGLSRKI  187 (323)
T ss_dssp             EECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC--EEECCCCC----
T ss_pred             EEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCC--EEEeeccccccc
Confidence            567766 8998886432               3677899999999999999999999999988765  999999999754


Q ss_pred             CCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCC
Q 024572           65 LLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDY  140 (265)
Q Consensus        65 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (265)
                      .....   .....+++.|+|||.+.+..++ .++|||||||++|+|++ |+.||.+...........    . ....+..
T Consensus       188 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~----~-~~~~~~~  261 (323)
T 3qup_A          188 YSGDYYRQGCASKLPVKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI----G-GNRLKQP  261 (323)
T ss_dssp             -------------CCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH----T-TCCCCCC
T ss_pred             cccccccccccccCcccccCchhhcCCCCC-CccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh----c-CCCCCCC
Confidence            33222   1223467789999999887765 56999999999999999 999998876544333222    1 2223444


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCC-------HHHHhcCcccCCCCC
Q 024572          141 VHISQDCRNLLSRIFVANPSRRIT-------IKEIKSHPWFLKNLP  179 (265)
Q Consensus       141 ~~~~~~~~~li~~~L~~dP~~R~s-------~~ell~h~~f~~~~~  179 (265)
                      ..++..+.+||.+||..||.+|||       +++++.|+|+.....
T Consensus       262 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~  307 (323)
T 3qup_A          262 PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ  307 (323)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred             CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence            578999999999999999999999       778899999976544

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.98  E-value=1.3e-32  Score=237.96  Aligned_cols=169  Identities=14%  Similarity=0.136  Sum_probs=127.3

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||+++++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.+..+.+||+|||+++....... 
T Consensus       131 ~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~  210 (364)
T 3op5_A          131 MDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH  210 (364)
T ss_dssp             EECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC
T ss_pred             EeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcc
Confidence            7899889999987652          36778999999999999999999999999843334599999999965432211 


Q ss_pred             -------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-----cC
Q 024572           70 -------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-----KI  137 (265)
Q Consensus        70 -------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~  137 (265)
                             .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+...................     ..
T Consensus       211 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (364)
T 3op5_A          211 KAYAADPKRCHDGTIEFTSIDAHNGVAPS-RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKC  289 (364)
T ss_dssp             CCSSCCSSCCCCCCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             cccccCcccccCCCCCccCHHHhCCCCCC-chhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHh
Confidence                   1234599999999999887764 5699999999999999999999864433332222211111000     00


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       138 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .....++..+.+||.+||..+|.+||++.++++
T Consensus       290 ~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          290 FPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             SCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            011367899999999999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.98  E-value=8.2e-33  Score=232.80  Aligned_cols=174  Identities=24%  Similarity=0.334  Sum_probs=129.6

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CC
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~   68 (265)
                      ||++.+ +|.+++...          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++..... ..
T Consensus        95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  172 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD--IRLADFGVSAKNLKTLQ  172 (302)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSC--EEECCCHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCC--EEEEECCCCcccccccc
Confidence            678755 888887653          23678899999999999999999999999987765  99999998742211 11


Q ss_pred             CCCCCcCCCCCccccccc-----CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 RPKSTVGTPAYIAPEVLS-----RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ......+++.|+|||++.     +..+ +.++|||||||++|+|++|+.||..............   ...........+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~  248 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVVMCETMKDTPY-DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SDPPTLLTPSKW  248 (302)
T ss_dssp             C-----CCGGGCCHHHHHHHHTTSTTT-TTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSSGGGS
T ss_pred             ccccccCChhhcCCeeeccccCCCCCC-chhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhc---cCCcccCCcccc
Confidence            223456899999999984     3344 4569999999999999999999987654333222111   111122233467


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      +..+.+||.+||..||.+|||+.++++||||+.....
T Consensus       249 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  285 (302)
T 2j7t_A          249 SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN  285 (302)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence            8999999999999999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.98  E-value=2e-32  Score=237.43  Aligned_cols=163  Identities=22%  Similarity=0.340  Sum_probs=129.4

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++.+++.+|.|||++||+||||||+|||++.++.  +|
T Consensus       166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--~k  243 (370)
T 2psq_A          166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MK  243 (370)
T ss_dssp             EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EE
T ss_pred             EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCC--EE
Confidence            688866 9999998653                         3668899999999999999999999999988775  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+........ .+   
T Consensus       244 l~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~-~~---  318 (370)
T 2psq_A          244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LL---  318 (370)
T ss_dssp             ECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HH---
T ss_pred             EccccCCcccCcccceecccCCCcccceECHhHhcCCCCC-cHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HH---
Confidence            99999997543322   12233577899999999887765 55999999999999999 999998765433322 21   


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . .....+.+..++..+.+||.+||..||.+|||+.+++++
T Consensus       319 ~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          319 K-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             H-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             h-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            1 222333445789999999999999999999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.98  E-value=1.5e-32  Score=232.51  Aligned_cols=160  Identities=31%  Similarity=0.497  Sum_probs=129.0

Q ss_pred             cccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEc-CCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            4 GVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         4 ~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~-~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      .+++|.+++..++         ++.+++.+|.|||++||+||||||+||+++ .++  .+||+|||+++..... .....
T Consensus       122 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~kl~dfg~~~~~~~~-~~~~~  198 (312)
T 2iwi_A          122 PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG--CAKLIDFGSGALLHDE-PYTDF  198 (312)
T ss_dssp             SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT--EEEECCCSSCEECCSS-CBCCC
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC--eEEEEEcchhhhcccC-ccccc
Confidence            4569999988654         467789999999999999999999999998 555  4999999998755432 23445


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSR  153 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  153 (265)
                      .++..|+|||++.+..+.+.++|||||||++|+|++|+.||....      .    +.......  ...++..+.+||.+
T Consensus       199 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~----~~~~~~~~--~~~~~~~~~~li~~  266 (312)
T 2iwi_A          199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------E----ILEAELHF--PAHVSPDCCALIRR  266 (312)
T ss_dssp             CSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------H----HHHTCCCC--CTTSCHHHHHHHHH
T ss_pred             CCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------H----HhhhccCC--cccCCHHHHHHHHH
Confidence            689999999999877776657999999999999999999996521      1    11122222  34689999999999


Q ss_pred             hcccCCCCCCCHHHHhcCcccCCCC
Q 024572          154 IFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       154 ~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ||..||.+|||+.++++||||+...
T Consensus       267 ~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          267 CLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HccCChhhCcCHHHHhcChhhcCch
Confidence            9999999999999999999998653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.98  E-value=2.5e-32  Score=231.20  Aligned_cols=163  Identities=23%  Similarity=0.323  Sum_probs=121.7

Q ss_pred             Cccccc-chHHHHHHhc------------cccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCC
Q 024572            1 MQLGVS-SLSEFVMLEG------------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSL   65 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~------------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~   65 (265)
                      ||++.+ +|.+++....            ++.+++.+|.|||++|  |+||||||+|||++.++.  +||+|||+++...
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~~  190 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT--VKVCDFGLSRLKA  190 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCC--EEECCCC------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCc--EEECCCCCCcccc
Confidence            688865 9999987543            3668899999999999  999999999999988765  9999999987433


Q ss_pred             CCC-CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           66 LHS-RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        66 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ... ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||.........    ..+.........+..++
T Consensus       191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~  265 (309)
T 3p86_A          191 STFLSSKSAAGTPEWMAPEVLRDEPSN-EKSDVYSFGVILWELATLQQPWGNLNPAQVV----AAVGFKCKRLEIPRNLN  265 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCC-TTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----HHHHHSCCCCCCCTTSC
T ss_pred             ccccccccCCCCccccChhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhcCCCCCCCccCC
Confidence            222 22345799999999999887775 4599999999999999999999876543322    22222223334445789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+.+||.+||..||.+|||+.++++
T Consensus       266 ~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          266 PQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999999987

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.98  E-value=4.8e-33  Score=238.97  Aligned_cols=170  Identities=15%  Similarity=0.123  Sum_probs=127.2

Q ss_pred             CcccccchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--
Q 024572            1 MQLGVSSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--   69 (265)
                      ||+++++|.+++..++         ++.+++.+|.|||++||+||||||+|||++.++.+.+||+|||+++.......  
T Consensus       131 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~  210 (345)
T 2v62_A          131 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK  210 (345)
T ss_dssp             EECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCC
T ss_pred             EeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccc
Confidence            7888779998876543         46778999999999999999999999999877644699999999975432211  


Q ss_pred             ------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH-HHHHHHHHhhhcc----cCC
Q 024572           70 ------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN-FRKTISRIMAVQY----KIP  138 (265)
Q Consensus        70 ------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~----~~~  138 (265)
                            .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||........ .............    ...
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (345)
T 2v62_A          211 QYQENPRKGHNGTIEFTSLDAHKGVALS-RRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWA  289 (345)
T ss_dssp             CCCCCGGGCSCSCTTTCCHHHHHTCCCC-HHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHS
T ss_pred             cchhccccccCCCccccCHHHhcCCCCC-chhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhc
Confidence                  1344699999999999887664 569999999999999999999965332222 2221111111000    001


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ....++..+.+||.+||..||.+|||+.++++.
T Consensus       290 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          290 PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             cccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            112588999999999999999999999999863

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.98  E-value=1.9e-32  Score=229.79  Aligned_cols=166  Identities=17%  Similarity=0.156  Sum_probs=126.5

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEc---CCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLD---GSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~---~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++...          .++.+++.++.|||++||+||||||+|||++   .++  .+||+|||+++.....
T Consensus        84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~--~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A           84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTT--CEEECCCTTCEECBCT
T ss_pred             EEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCC--eEEEeeCCCccccccc
Confidence            789988999998732          2367889999999999999999999999994   444  4999999998754433


Q ss_pred             CC--------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHHHhhhccc
Q 024572           68 SR--------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---KNFRKTISRIMAVQYK  136 (265)
Q Consensus        68 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~~~  136 (265)
                      ..        .....|++.|+|||++.+..++ .++|||||||++|+|++|+.||......   ..+............ 
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-  239 (296)
T 3uzp_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQS-RRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-  239 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-
T ss_pred             ccccccccccccccccccccCChhhhcCCCCC-cchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-
Confidence            22        2345799999999999887764 5699999999999999999999874322   222222221111110 


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ......+++.+.+||.+||..||.+|||+.++++
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            0012357899999999999999999999999975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.98  E-value=1.5e-32  Score=230.35  Aligned_cols=166  Identities=17%  Similarity=0.157  Sum_probs=126.7

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEE---cCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll---~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++...          .++.+++.++.|||++||+||||||+|||+   +.++.  +||+|||+++.....
T Consensus        84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~--~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A           84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL--VYIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTC--EEECCCTTCEECBCT
T ss_pred             EEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCe--EEEecCccceeccCc
Confidence            789988999998743          236788999999999999999999999999   55554  999999999754332


Q ss_pred             C--------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHHHhhhccc
Q 024572           68 S--------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP---KNFRKTISRIMAVQYK  136 (265)
Q Consensus        68 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~~~  136 (265)
                      .        ......+|+.|+|||++.+..++ .++|||||||++|+|++|+.||.+....   ..+........... .
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~  239 (296)
T 4hgt_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQS-RRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I  239 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H
T ss_pred             ccCccCCCCcccccCCCccccchHHhcCCCCC-chhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-h
Confidence            2        12345699999999999887764 5699999999999999999999875432   12222221111110 0


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ......+++.+.+||.+||..||.+|||+.++++
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            0112357899999999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.98  E-value=2.3e-32  Score=235.26  Aligned_cols=169  Identities=11%  Similarity=0.148  Sum_probs=130.2

Q ss_pred             CcccccchHHHHHHh--c---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVSSLSEFVMLE--G---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~--~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||+++++|.+++...  .         ++.+++.+|.|||++||+||||||+|||++.++...+||+|||+++...... 
T Consensus       137 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~  216 (352)
T 2jii_A          137 LPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK  216 (352)
T ss_dssp             EECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGC
T ss_pred             ecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCc
Confidence            789988999999864  2         3777899999999999999999999999997763359999999997543221 


Q ss_pred             -------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHhhhcccCC--
Q 024572           69 -------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE-DPKNFRKTISRIMAVQYKIP--  138 (265)
Q Consensus        69 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~--  138 (265)
                             ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||.... ...................+  
T Consensus       217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (352)
T 2jii_A          217 HVAYVEGSRSPHEGDLEFISMDLHKGCGPS-RRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGP  295 (352)
T ss_dssp             CCCCCTTSSCTTCSCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECT
T ss_pred             cccccccccccccCCccccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhh
Confidence                   11334799999999999887664 56999999999999999999998765 33333333332222211111  


Q ss_pred             --CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          139 --DYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       139 --~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                        .+..++..+.+||.+||..||.+|||+.++++
T Consensus       296 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          296 CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence              12256899999999999999999999999976

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=238.88  Aligned_cols=168  Identities=16%  Similarity=0.247  Sum_probs=131.0

Q ss_pred             Cccccc-chHHHHHHhc----------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVMLEG----------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~   62 (265)
                      ||++.+ +|.+++....                ++.+++.+|.|||++||+||||||+|||++.++ ...+||+|||+++
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence            788854 9999998754                467889999999999999999999999998543 2249999999986


Q ss_pred             cCCC---CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           63 SSLL---HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        63 ~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                      ....   ........+|+.|+|||++.+..++ .++|||||||++|+|++ |..||........    ...+.. ....+
T Consensus       233 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DvwslG~il~ellt~g~~pf~~~~~~~~----~~~i~~-~~~~~  306 (367)
T 3l9p_A          233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT-SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV----LEFVTS-GGRMD  306 (367)
T ss_dssp             HHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH----HHHHHT-TCCCC
T ss_pred             ccccccccccCCCcCCcccEECHHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHc-CCCCC
Confidence            3221   1223345688999999999887765 55999999999999998 9999987654322    222222 22233


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      .+..++..+.+||.+||..||.+|||+.+++++.++
T Consensus       307 ~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          307 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            445789999999999999999999999999998765

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=1.6e-32  Score=236.51  Aligned_cols=148  Identities=24%  Similarity=0.364  Sum_probs=118.4

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......   .....+|+.|+|||++.+..++ .
T Consensus       198 ~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~  274 (359)
T 3vhe_A          198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV--VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-I  274 (359)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCC-H
T ss_pred             HHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCc--EEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCC-c
Confidence            3567899999999999999999999999987765  99999999975433221   2234578899999999877765 5


Q ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572           94 LADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++|||||||++|+|++ |+.||.+..........+..    ....+.+..+++.+.++|.+||..||.+|||+.++++|
T Consensus       275 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          275 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            6999999999999998 99999887655444333322    22333445689999999999999999999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.97  E-value=5.5e-32  Score=226.71  Aligned_cols=167  Identities=20%  Similarity=0.288  Sum_probs=120.3

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--   67 (265)
                      ||++.+ +|.+++...          .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.....  
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  175 (289)
T 3og7_A           98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSG  175 (289)
T ss_dssp             EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE--EEECCCC----------
T ss_pred             EEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC--EEEccceeccccccccc
Confidence            677764 888887432          34778899999999999999999999999988765  999999998744321  


Q ss_pred             -CCCCCCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           68 -SRPKSTVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                       .......||+.|+|||++.   +..+ +.++|||||||++|+|++|+.||............+...............+
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (289)
T 3og7_A          176 SHQFEQLSGSILWMAPEVIRMQDSNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC  254 (289)
T ss_dssp             --------CCCTTCCHHHHC----CCS-CHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTS
T ss_pred             cccccccCCCccccCchhhcccCCCCC-CcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccC
Confidence             1223346899999999986   3333 4569999999999999999999988776555444433311111111122367


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++.+.+||.+||..||.+|||+.++++
T Consensus       255 ~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          255 PKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            899999999999999999999999986

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=4.8e-32  Score=230.91  Aligned_cols=163  Identities=20%  Similarity=0.298  Sum_probs=127.8

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++....                         ++.+++.+|.|||++||+||||||+|||++.++.  +|
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~--~k  182 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--AK  182 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC--EE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCe--EE
Confidence            788854 9999987653                         3677899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhh
Q 024572           55 ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      |+|||+++............+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+.....    ....+. .
T Consensus       183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~pf~~~~~~~----~~~~~~-~  256 (327)
T 1fvr_A          183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----LYEKLP-Q  256 (327)
T ss_dssp             ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHGG-G
T ss_pred             EcccCcCccccccccccCCCCCccccChhhhccccCC-chhcchHHHHHHHHHHcCCCCCCCCCcHHH----HHHHhh-c
Confidence            9999998754433333445678899999999877664 55999999999999998 999998765432    222222 2


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ....+.+..+++.+.+||.+||..||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          257 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            23334445789999999999999999999999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=233.40  Aligned_cols=163  Identities=21%  Similarity=0.324  Sum_probs=129.1

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++.+++.+|.|||++||+||||||+|||++.++.  +|
T Consensus       154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~k  231 (382)
T 3tt0_A          154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MK  231 (382)
T ss_dssp             EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EE
T ss_pred             EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCc--EE
Confidence            688865 9999997653                         3667899999999999999999999999987775  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |..||........    ...+
T Consensus       232 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwslG~il~ellt~g~~p~~~~~~~~~----~~~~  306 (382)
T 3tt0_A          232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL----FKLL  306 (382)
T ss_dssp             ECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH----HHHH
T ss_pred             EcccCcccccccccccccccCCCCCcceeCHHHhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHH
Confidence            99999997544322   22334577889999999887765 55999999999999999 9999987653322    2222


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . .......+..++..+.+||.+||..||.+|||+.+++++
T Consensus       307 ~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          307 K-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             H-TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             H-cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2 222333445789999999999999999999999999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=9.3e-32  Score=229.49  Aligned_cols=167  Identities=17%  Similarity=0.185  Sum_probs=127.0

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCC---CcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA---PRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~---~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++...          .++.+++.+|.|||++||+||||||+|||++.++.   ..+||+|||+++.....
T Consensus        84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           84 LELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             EEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence            789988999998853          23678899999999999999999999999976542   23999999999754332


Q ss_pred             CC--------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC
Q 024572           68 SR--------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD  139 (265)
Q Consensus        68 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  139 (265)
                      ..        .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+..... ....+..+.......+.
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~g~~Pf~~~~~~~-~~~~~~~i~~~~~~~~~  241 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQS-RRDDLEALGHMFMYFLRGSLPWQGLKADT-LKERYQKIGDTKRATPI  241 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTTTCCCSS-HHHHHHHHHHHHHHSCH
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCC-chhHHHHHHHHHHHHhcCCCCcccccccc-HHHHHHHHHhhhccCCH
Confidence            21        2355799999999999987764 56999999999999999999998764332 22222222222222221


Q ss_pred             ---CCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          140 ---YVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       140 ---~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                         ...++ .+.++|.+||..||.+||++.++++
T Consensus       242 ~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          242 EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence               11234 9999999999999999999999876

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.1e-32  Score=233.48  Aligned_cols=165  Identities=21%  Similarity=0.316  Sum_probs=131.3

Q ss_pred             Cccccc-chHHHHHHhc--------------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcC
Q 024572            1 MQLGVS-SLSEFVMLEG--------------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG   47 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~   47 (265)
                      ||++.+ +|.+++..+.                                ++.+++.+|.|||++||+||||||+|||++.
T Consensus       128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~  207 (344)
T 1rjb_A          128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  207 (344)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcC
Confidence            688855 9999987643                                4668899999999999999999999999987


Q ss_pred             CCCCcEEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHH
Q 024572           48 SPAPRLKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNF  123 (265)
Q Consensus        48 ~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~  123 (265)
                      ++.  +||+|||++........   .....+|+.|+|||++.+..++ .++|||||||++|+|++ |..||.+......+
T Consensus       208 ~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  284 (344)
T 1rjb_A          208 GKV--VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT-IKSDVWSYGILLWEIFSLGVNPYPGIPVDANF  284 (344)
T ss_dssp             TTE--EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             CCc--EEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCC-hhHhHHHHHHHHHHHHcCCCCCcccCCcHHHH
Confidence            765  99999999875433222   1233477889999999877664 56999999999999998 99999887655444


Q ss_pred             HHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                      ...+.    .....+.+..+++.+.+||.+||..||.+|||+.++++|.
T Consensus       285 ~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          285 YKLIQ----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             HHHHH----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHh----cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            43332    2333444456899999999999999999999999999863

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=3.1e-32  Score=226.74  Aligned_cols=170  Identities=24%  Similarity=0.399  Sum_probs=131.0

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhcC-----ceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQQ-----ICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~~-----ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||++.+ +|.+++....             ++.+++.++.|||++|     |+||||||+||+++.++.  +||+|||++
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~--~kl~dfg~~  163 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN--VKLGDFGLA  163 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSC--EEECCCCHH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCC--EEEecCchh
Confidence            688865 9999987532             3667899999999999     999999999999987765  999999998


Q ss_pred             ccCCCCCC-CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCC
Q 024572           62 KSSLLHSR-PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY  140 (265)
Q Consensus        62 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (265)
                      +....... .....+++.|+|||++.+..++ .++||||||+++|+|++|+.||........    ...+..... .+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~i~~~~~-~~~~  237 (279)
T 2w5a_A          164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKEL----AGKIREGKF-RRIP  237 (279)
T ss_dssp             HHC---CHHHHHHHSCCTTCCHHHHHCC-CC-HHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCC-CCCC
T ss_pred             eeeccccccccccCCCccccChHHhccCCCC-chhhHHHHHHHHHHHHHCCCCCcccCHHHH----HHHHhhccc-ccCC
Confidence            75432211 1223589999999999887664 569999999999999999999987653222    222222222 2233


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       141 ~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ..++..+.++|.+||..||.+|||+.++++|+|+....
T Consensus       238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            46899999999999999999999999999999997643

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.97  E-value=4.4e-32  Score=228.12  Aligned_cols=168  Identities=25%  Similarity=0.323  Sum_probs=123.4

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhh--------hcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSL--------SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH--------~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++....        ++.+++.++.|||        ++||+||||||+|||++.++.  +||+|||+++.
T Consensus        85 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~a~~  162 (301)
T 3q4u_A           85 THYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ--CCIADLGLAVM  162 (301)
T ss_dssp             ECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSC--EEECCCTTCEE
T ss_pred             hhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCC--EEEeeCCCeee
Confidence            688866 9999885433        4778899999999        999999999999999987775  99999999864


Q ss_pred             CCCCCC-----CCCCcCCCCCcccccccCCcCC-----CchHhHHHHHHHHHHHHhC----------CCCCCCCCChHHH
Q 024572           64 SLLHSR-----PKSTVGTPAYIAPEVLSRREYD-----GKLADVWSCGVTLYVMLVG----------AYPFEDQEDPKNF  123 (265)
Q Consensus        64 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~-----~~~~DiwslG~~l~~ll~g----------~~pf~~~~~~~~~  123 (265)
                      ......     .....||+.|+|||++.+....     +.++|||||||++|+|++|          +.||.........
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~  242 (301)
T 3q4u_A          163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS  242 (301)
T ss_dssp             EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc
Confidence            332211     2334799999999999875322     2469999999999999999          8888664332221


Q ss_pred             HHHHHHHhhhcccCCCC------CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          124 RKTISRIMAVQYKIPDY------VHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       124 ~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ...+..........+..      ..++..+.+||.+||..||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          243 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            22222222221111111      124467999999999999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.9e-32  Score=229.71  Aligned_cols=169  Identities=21%  Similarity=0.332  Sum_probs=123.5

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhc--------CceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQ--------QICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~--------~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++....        ++.+++.+|.|||++        ||+||||||+|||++.++.  +||+|||+++.
T Consensus       114 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~--~kl~Dfg~a~~  191 (337)
T 3mdy_A          114 TDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVK  191 (337)
T ss_dssp             ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC--EEECCCTTCEE
T ss_pred             EeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC--EEEEeCCCcee
Confidence            788866 9999987543        367789999999999        9999999999999987775  99999999865


Q ss_pred             CCCCCC-----CCCCcCCCCCcccccccCCcCCCc-----hHhHHHHHHHHHHHHhC----------CCCCCCCCChHHH
Q 024572           64 SLLHSR-----PKSTVGTPAYIAPEVLSRREYDGK-----LADVWSCGVTLYVMLVG----------AYPFEDQEDPKNF  123 (265)
Q Consensus        64 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~-----~~DiwslG~~l~~ll~g----------~~pf~~~~~~~~~  123 (265)
                      ......     .....||+.|+|||++.+......     ++|||||||++|+|++|          ..||.........
T Consensus       192 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~  271 (337)
T 3mdy_A          192 FISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS  271 (337)
T ss_dssp             CC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             eccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCc
Confidence            433222     124579999999999987655433     48999999999999999          6777654322211


Q ss_pred             HHHHHHHhhh-cccCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          124 RKTISRIMAV-QYKIPDY-----VHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       124 ~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .......... ......+     ..++..+.+||.+||..||.+|||+.++++|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          272 YEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            2222221111 1111111     1355679999999999999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=1.1e-31  Score=228.56  Aligned_cols=163  Identities=19%  Similarity=0.259  Sum_probs=125.9

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~  170 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDK  170 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSC--EEECSCSGGGGSCCCTT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCe--EEECCCCcccccCcccc
Confidence            46665 59999887542          3567899999999999999999999999987765  99999999986543322


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....++..|+|||++.+..++ .++|||||||++|+|++ |+.||.+....... ..+    ......+.+..++.
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~----~~~~~~~~~~~~~~  244 (325)
T 3kex_A          171 QLLYSEAKTPIKWMALESIHFGKYT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-DLL----EKGERLAQPQICTI  244 (325)
T ss_dssp             CCC-----CCTTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH-HHH----HTTCBCCCCTTBCT
T ss_pred             cccccCCCCcccccChHHhccCCCC-hhhHhHHhHHHHHHHHhCCCCCccccCHHHHH-HHH----HcCCCCCCCCcCcH
Confidence               2334577899999999877765 56999999999999999 99999876543322 211    12223334446788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.++|.+||..||.+|||+.+++++
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          245 DVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999999986

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=1.4e-31  Score=224.63  Aligned_cols=167  Identities=18%  Similarity=0.242  Sum_probs=124.6

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++. ++|.+++....          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++...... 
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  169 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKE  169 (295)
T ss_dssp             EECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCCCSCC-------
T ss_pred             EEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCe--EEEccCcccccccCCcc
Confidence            68884 49999987643          3678899999999999999999999999987765  9999999997543322 


Q ss_pred             ---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC-----------hHHHHHHHHHHhhhc
Q 024572           69 ---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED-----------PKNFRKTISRIMAVQ  134 (265)
Q Consensus        69 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~  134 (265)
                         ......++..|+|||++.+..++ .++|||||||++|+|++|..||.....           ...............
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (295)
T 3ugc_A          170 FFKVKEPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN  248 (295)
T ss_dssp             ------CTTCGGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred             eeeeccCCCCccceeCcHHhcCCCCC-hHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence               11223467789999999887764 569999999999999999999865211           011111112222233


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ...+.+..+++.+.+||.+||..||.+|||+.++++
T Consensus       249 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            345556678999999999999999999999999985

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=8.6e-32  Score=224.58  Aligned_cols=163  Identities=22%  Similarity=0.375  Sum_probs=119.6

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  171 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTY  171 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECC------------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCC--EEECccccccccCcccc
Confidence            688876 9999987653          2567899999999999999999999999987765  99999999875433222


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.........+    .. ....+.+..+++.
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i----~~-~~~~~~~~~~~~~  245 (281)
T 1mp8_A          172 YKASKGKLPIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI----EN-GERLPMPPNCPPT  245 (281)
T ss_dssp             -------CCGGGCCHHHHHHCCCS-HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HT-TCCCCCCTTCCHH
T ss_pred             cccccCCCcccccChhhcccCCCC-CccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH----Hc-CCCCCCCCCCCHH
Confidence              1223467789999999877664 56999999999999996 99999876654433222    11 1223444578999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..||.+|||+.+++++
T Consensus       246 l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          246 LYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999999864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=1.4e-31  Score=226.24  Aligned_cols=164  Identities=24%  Similarity=0.342  Sum_probs=130.5

Q ss_pred             Cccccc-chHHHHHHhc---------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCc
Q 024572            1 MQLGVS-SLSEFVMLEG---------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPR   52 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~   52 (265)
                      ||++.+ +|.+++..+.                           ++.+++.+|.|||++||+||||||+||+++.++.  
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--  183 (313)
T 1t46_A          106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI--  183 (313)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTE--
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCC--
Confidence            678765 9999987653                           3567899999999999999999999999987765  


Q ss_pred             EEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHH
Q 024572           53 LKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTIS  128 (265)
Q Consensus        53 vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~  128 (265)
                      +||+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |+.||............+.
T Consensus       184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  262 (313)
T 1t46_A          184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (313)
T ss_dssp             EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCC-hHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhc
Confidence            99999999875543322   2233467889999999877664 56999999999999999 9999988765544444333


Q ss_pred             HHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          129 RIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .    ....+....++..+.+||.+||..||.+|||+.+++++
T Consensus       263 ~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          263 E----GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             H----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             c----CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            2    23333445689999999999999999999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.97  E-value=5e-32  Score=227.70  Aligned_cols=169  Identities=27%  Similarity=0.355  Sum_probs=123.1

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++..++         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......  
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  167 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETSLT  167 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCSSSTTC------
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEEeCCCcccccccccc
Confidence            788865 9999987664         3667899999999999999999999999988775  9999999997543322  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......||+.|+|||.+.+..++ .++|||||||++|+|++|+.||.+..........+.... ..........+++.+.
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  245 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKGEATD-ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV-PNVTTDVRKDIPQSLS  245 (294)
T ss_dssp             -------CCSSCCHHHHHTCCCC-TTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC-CCHHHHSCTTSCHHHH
T ss_pred             ccCccccCccccCHhHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC-CCcchhcccCCCHHHH
Confidence            22334699999999999887765 459999999999999999999987654333222211100 0000112346889999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                      ++|.+||..||.+||+..+.+.+.|
T Consensus       246 ~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          246 NVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             HHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHHhcCCHhHccccHHHHHHHH
Confidence            9999999999999995555555544

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=227.87  Aligned_cols=162  Identities=22%  Similarity=0.327  Sum_probs=125.9

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++...          .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~  206 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV--CKVSDFGLSRVLEDDPD  206 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCSSCEECC----
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCC--EEECCCCcccccccCcc
Confidence            788855 999998644          23677899999999999999999999999987765  99999999975433221


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .    ....+|+.|+|||++.+..++ .++|||||||++|+|++ |..||..........    .+. .....+.+..++
T Consensus       207 ~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~  280 (325)
T 3kul_A          207 AAYTTTGGKIPIRWTAPEAIAFRTFS-SASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS----SVE-EGYRLPAPMGCP  280 (325)
T ss_dssp             CCEECC---CCGGGSCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH----HHH-TTCCCCCCTTCC
T ss_pred             ceeeccCCCCcccccCHhHhcCCCCC-cHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH----HHH-cCCCCCCCCCcC
Confidence            1    122357789999999877765 45999999999999999 999998765433222    222 223445556789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.+||.+||..||.+|||+.++++
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=2.9e-31  Score=237.18  Aligned_cols=166  Identities=19%  Similarity=0.155  Sum_probs=126.3

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEE---cCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLL---DGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll---~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++...          .++.+|+.+|.|||++|||||||||+||||   +..+.  +||+|||+++.....
T Consensus        82 me~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~--vkL~DFGla~~~~~~  159 (483)
T 3sv0_A           82 MDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKKYRDT  159 (483)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTC--EEECCCTTCEECBCT
T ss_pred             EECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCe--EEEEeCCcceeccCC
Confidence            799988999998742          246788999999999999999999999999   44544  999999999754432


Q ss_pred             CC--------CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--
Q 024572           68 SR--------PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--  137 (265)
Q Consensus        68 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--  137 (265)
                      ..        .....||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+........ .+..+.......  
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          160 STHQHIPYRENKNLTGTARYASVNTHLGIEQS-RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-KYEKISEKKVATSI  237 (483)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH-HHHHHHHHHHHSCH
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCC-hHHHHHHHHHHHHHHHhCCCCCccccchhHHH-HHHHHhhccccccH
Confidence            22        2245799999999999887765 56999999999999999999998765432211 111111111110  


Q ss_pred             -CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          138 -PDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       138 -~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                       .....++.++.+||.+||..+|.+||++.+|++
T Consensus       238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence             111357899999999999999999999988754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=2e-31  Score=220.75  Aligned_cols=163  Identities=21%  Similarity=0.289  Sum_probs=127.3

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~  159 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLC--VKVSDFGMTRYVLDDQY  159 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCC--EEECCTTCEEECCTTCE
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCC--EEEccCccceecchhhh
Confidence            68885 48999887653          3677899999999999999999999999988775  99999999875433221


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        .....+++.|+|||++.+..++. ++||||||+++|+|++ |+.||...........    +.. ......+..+++.
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~  233 (268)
T 3sxs_A          160 VSSVGTKFPVKWSAPEVFHYFKYSS-KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK----VSQ-GHRLYRPHLASDT  233 (268)
T ss_dssp             EECCSCCCCGGGCCHHHHHHSEEET-THHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----HHT-TCCCCCCTTSCHH
T ss_pred             hcccCCCcCcccCCHHHHhccCCch-hhhhHHHHHHHHHHHcCCCCCccccChHHHHHH----HHc-CCCCCCCCcChHH
Confidence              12334667899999998777654 5999999999999999 9999987654332222    222 2223334467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..||.+|||+.+++++
T Consensus       234 l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          234 IYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999986

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.97  E-value=1.5e-31  Score=221.65  Aligned_cols=165  Identities=24%  Similarity=0.338  Sum_probs=122.4

Q ss_pred             Ccccc-cchHHHHHHh--------ccccchHHHHHhhhhcC---ceecCCCcCcEEEcCC------CCCcEEEeccCCcc
Q 024572            1 MQLGV-SSLSEFVMLE--------GSVKMKPDIFFSSLSQQ---ICHRDLKLENTLLDGS------PAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~-~sL~~~~~~~--------~~~~~i~~~l~~lH~~~---ivH~dlkp~NIll~~~------~~~~vkl~Dfg~a~   62 (265)
                      ||++. ++|.+++..+        .++.+++.++.|||++|   |+||||||+||+++..      ..+.+||+|||+++
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence            67885 4888876432        34778899999999999   9999999999999752      12359999999987


Q ss_pred             cCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           63 SSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        63 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      ..... ......+++.|+|||.+.+..++ .++||||||+++|+|++|+.||.+......    ...........+....
T Consensus       165 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~  238 (271)
T 3dtc_A          165 EWHRT-TKMSAAGAYAWMAPEVIRASMFS-KGSDVWSYGVLLWELLTGEVPFRGIDGLAV----AYGVAMNKLALPIPST  238 (271)
T ss_dssp             ------------CCGGGSCHHHHHHCCCS-HHHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHTSCCCCCCCTT
T ss_pred             ccccc-cccCCCCccceeCHHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHhhhcCCCCCCCCcc
Confidence            54332 22345789999999999877664 569999999999999999999987654322    2222333334445557


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +++.+.++|.+||..||.+|||+.+++++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            89999999999999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=2.6e-31  Score=224.66  Aligned_cols=163  Identities=21%  Similarity=0.316  Sum_probs=128.3

Q ss_pred             Ccccc-cchHHHHHHhc---------------------------------cccchHHHHHhhhhcCceecCCCcCcEEEc
Q 024572            1 MQLGV-SSLSEFVMLEG---------------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLD   46 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~   46 (265)
                      ||++. ++|.+++....                                 ++.+++.++.|||++||+||||||+||+++
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~  184 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA  184 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEc
Confidence            67886 59999987643                                 366789999999999999999999999999


Q ss_pred             CCCCCcEEEeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHH
Q 024572           47 GSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKN  122 (265)
Q Consensus        47 ~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~  122 (265)
                      .++.  +||+|||+++......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+......
T Consensus       185 ~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~  261 (314)
T 2ivs_A          185 EGRK--MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPGIPPERL  261 (314)
T ss_dssp             TTTE--EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             CCCC--EEEccccccccccccccceeccCCCCcccccChhhhcCCCcC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            7765  9999999987543322   12233577889999999877665 55999999999999999 9999987655332


Q ss_pred             HHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          123 FRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . ..+    ......+.+..+++.+.+||.+||..||.+|||+.+++++
T Consensus       262 ~-~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          262 F-NLL----KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             H-HHH----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             H-HHh----hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            2 222    1222333445789999999999999999999999999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.97  E-value=7.1e-31  Score=219.47  Aligned_cols=166  Identities=23%  Similarity=0.274  Sum_probs=127.2

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCC---CcEEEeccCCcccC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPA---PRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~---~~vkl~Dfg~a~~~   64 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++|  |+||||||+|||++.++.   ..+||+|||+++..
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~  179 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS  179 (287)
T ss_dssp             EECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCC
T ss_pred             EEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccc
Confidence            68886 58988886543          4677899999999999  999999999999975442   23899999998743


Q ss_pred             CCCCCCCCCcCCCCCcccccccCC-cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRR-EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ..  ......+++.|+|||++.+. ...+.++|||||||++|+|++|+.||........  ...............+..+
T Consensus       180 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~  255 (287)
T 4f0f_A          180 VH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREEGLRPTIPEDC  255 (287)
T ss_dssp             SS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHHHHSCCCCCCCTTS
T ss_pred             cc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHHhccCCCCCCCccc
Confidence            32  33445799999999998432 2234569999999999999999999987654332  1122222333334445578


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++.+.+||.+||..||.+|||+.++++
T Consensus       256 ~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          256 PPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.97  E-value=2.4e-31  Score=221.73  Aligned_cols=164  Identities=22%  Similarity=0.268  Sum_probs=131.1

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~  176 (284)
T 2a19_B           99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDG  176 (284)
T ss_dssp             ECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTTCEESSCCS
T ss_pred             EeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCC--EEECcchhheeccccc
Confidence            688876 9999987542           3677899999999999999999999999987765  9999999998665554


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                      ......+++.|+|||++.+..++ .++|||||||++|+|++|..||...      ......+...  ..  ...++..+.
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~~~~~~~~------~~~~~~~~~~--~~--~~~~~~~~~  245 (284)
T 2a19_B          177 KRTRSKGTLRYMSPEQISSQDYG-KEVDLYALGLILAELLHVCDTAFET------SKFFTDLRDG--II--SDIFDKKEK  245 (284)
T ss_dssp             CCCCCCSCCTTSCHHHHHCSCCC-THHHHHHHHHHHHHHHSCCSSHHHH------HHHHHHHHTT--CC--CTTSCHHHH
T ss_pred             cccccCCcccccChhhhccCCCc-chhhhHHHHHHHHHHHhcCCcchhH------HHHHHHhhcc--cc--cccCCHHHH
Confidence            55556799999999999887765 5599999999999999999887431      1122222211  12  235789999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +||.+||..||.+|||+.++++|.+..+.
T Consensus       246 ~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          246 TLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            99999999999999999999999876443

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=1e-31  Score=229.01  Aligned_cols=161  Identities=19%  Similarity=0.308  Sum_probs=125.5

Q ss_pred             ccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC--
Q 024572            3 LGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP--   70 (265)
Q Consensus         3 ~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~--   70 (265)
                      +.+++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++........  
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~~~  175 (327)
T 3poz_A           98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKEYH  175 (327)
T ss_dssp             CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE--EEECCTTHHHHHTTTCC---
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCC--EEEccCcceeEccCCccccc
Confidence            34458988887632          4678899999999999999999999999988775  999999998754332221  


Q ss_pred             -CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           71 -KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        71 -~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                       ....+|..|+|||++.+..++ .++|||||||++|+|++ |+.||.+...... ...+    ......+.+..++..+.
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~  249 (327)
T 3poz_A          176 AEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSIL----EKGERLPQPPICTIDVY  249 (327)
T ss_dssp             ----CCCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHH----HTTCCCCCCTTBCHHHH
T ss_pred             ccCCCccccccChHHhccCCCC-chhhhhhhHHHHHHHHhcCCCCccCCCHHHH-HHHH----HcCCCCCCCccCCHHHH
Confidence             223467799999999887765 56999999999999999 9999987654332 2222    22233445557899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +++.+||..||.+|||+.+++++
T Consensus       250 ~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          250 MIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.97  E-value=9.6e-32  Score=228.78  Aligned_cols=167  Identities=19%  Similarity=0.204  Sum_probs=122.4

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhc----------CceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQ----------QICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~----------~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||++.+ +|.+++..+.        ++.+++.++.|||++          ||+||||||+|||++.++.  +||+|||++
T Consensus       101 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~--~kL~DFg~a  178 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT--ACIADFGLA  178 (322)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCC--EEECCCTTC
T ss_pred             EecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCe--EEEccCCcc
Confidence            788866 9999987643        367889999999999          9999999999999987765  999999999


Q ss_pred             ccCCCCC---CCCCCcCCCCCcccccccCCcC----CCchHhHHHHHHHHHHHHhCCCCCCCCCChH------------H
Q 024572           62 KSSLLHS---RPKSTVGTPAYIAPEVLSRREY----DGKLADVWSCGVTLYVMLVGAYPFEDQEDPK------------N  122 (265)
Q Consensus        62 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~----~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~------------~  122 (265)
                      +......   ......||+.|+|||++.+...    .+.++|||||||++|+|++|+.||.+.....            .
T Consensus       179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~  258 (322)
T 3soc_A          179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS  258 (322)
T ss_dssp             EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred             cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence            6543322   2233579999999999986322    2345899999999999999999997643211            1


Q ss_pred             HHHHHHHHhhhcccCCCCC------CCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          123 FRKTISRIMAVQYKIPDYV------HISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ............ ..+...      ..+..+.+||.+||..||.+|||+.++++
T Consensus       259 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          259 LEDMQEVVVHKK-KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHHHTTSC-CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhhhhhhccc-CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            111111111111 111111      12345999999999999999999999986

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=1.5e-31  Score=221.69  Aligned_cols=163  Identities=20%  Similarity=0.334  Sum_probs=127.5

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  161 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQY  161 (269)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC--EEECCTTGGGGBCCHHH
T ss_pred             EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCC--EEecccccccccccccc
Confidence            688855 8999986543          3677899999999999999999999999987765  9999999987443221 


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                       ......+++.|+|||++.+..++ .++||||||+++|+|++ |+.||..........    .+.. ......+..++..
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~  235 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DIST-GFRLYKPRLASTH  235 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHT-TCCCCCCTTSCHH
T ss_pred             ccccCcccccccCCHHHhcCCCCC-chhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH----HHhc-CccCCCCCcCCHH
Confidence             22334567789999999877765 55999999999999999 999998765433222    2222 2233344467999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..||.+|||+.++++|
T Consensus       236 ~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          236 VYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999999976

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.97  E-value=1.7e-31  Score=225.97  Aligned_cols=164  Identities=23%  Similarity=0.347  Sum_probs=129.4

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++.+++.++.|||++||+||||||+||+++.++.  +|
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~--~k  188 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV--VK  188 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EE
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC--EE
Confidence            678865 9999887543                         3567899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||............+.. 
T Consensus       189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-  266 (316)
T 2xir_A          189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-  266 (316)
T ss_dssp             ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH-
T ss_pred             ECCCccccccccCccceeccCCCcceeecCchhhcccccc-chhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc-
Confidence            999999875433222   1233578899999999877765 56999999999999998 99999886654443333322 


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                         ....+.+..+++.+.++|.+||..||.+|||+.++++|
T Consensus       267 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          267 ---GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               22233344689999999999999999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=1.7e-31  Score=228.68  Aligned_cols=163  Identities=20%  Similarity=0.272  Sum_probs=126.8

Q ss_pred             Cccccc-chHHHHHHhc---------------------------------cccchHHHHHhhhhcCceecCCCcCcEEEc
Q 024572            1 MQLGVS-SLSEFVMLEG---------------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLD   46 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~   46 (265)
                      ||++.+ +|.+++....                                 ++.+++.+|.|||++||+||||||+|||++
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~  208 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG  208 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEC
Confidence            688865 9999987642                                 467889999999999999999999999998


Q ss_pred             CCCCCcEEEeccCCcccCCCC---CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHH
Q 024572           47 GSPAPRLKICDFGYSKSSLLH---SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKN  122 (265)
Q Consensus        47 ~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~  122 (265)
                      .++.  +||+|||+++.....   .......+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+......
T Consensus       209 ~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~  285 (343)
T 1luf_A          209 ENMV--VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT-TESDVWAYGVVLWEIFSYGLQPYYGMAHEEV  285 (343)
T ss_dssp             GGGC--EEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             CCCe--EEEeecCCCcccccCccccccCCCcccceecChhhhccCCcC-cccccHHHHHHHHHHHhcCCCcCCCCChHHH
Confidence            7765  999999998643222   122334678899999999877764 56999999999999999 9999987654322


Q ss_pred             HHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          123 FRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                          ...+.... ..+.+..++..+.+||.+||..||.+|||+.+++++
T Consensus       286 ----~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          286 ----IYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             ----HHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----HHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                22222222 223344689999999999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=226.14  Aligned_cols=163  Identities=19%  Similarity=0.222  Sum_probs=123.4

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN--VVVADFGLARLMVDEKT  163 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSC--EEECCCTTCEECC----
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCC--EEEeecccceecccccc
Confidence            688866 9999987622          3678899999999999999999999999988776  99999999875432221


Q ss_pred             C---------------CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHHHHhhh
Q 024572           70 P---------------KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNF-RKTISRIMAV  133 (265)
Q Consensus        70 ~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~~~  133 (265)
                      .               ....||+.|+|||++.+..++ .++|||||||++|+|++|..||......... ......... 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-  241 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD-EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD-  241 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH-
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCC-cHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc-
Confidence            1               145699999999999887765 4599999999999999999998764322110 000011111 


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                         ...+..+++.+.+||.+||..||.+|||+.++++
T Consensus       242 ---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          242 ---RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             ---HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               1112357889999999999999999999999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=3.6e-31  Score=220.75  Aligned_cols=163  Identities=21%  Similarity=0.266  Sum_probs=126.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  168 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC--VKLGDFGLSRYIEDEDY  168 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTE--EEECCCCGGGCC-----
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCc--EEeCccCCCcccccccc
Confidence            677764 9999987653          2567899999999999999999999999987765  99999999875433221


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        .....+++.|+|||++.+..++ .++|||||||++|+|++ |+.||........... +.    .....+.+..+++.
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~  242 (281)
T 3cc6_A          169 YKASVTRLPIKWMSPESINFRRFT-TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LE----KGDRLPKPDLCPPV  242 (281)
T ss_dssp             ----CCCCCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HH----HTCCCCCCTTCCHH
T ss_pred             cccccCCCCcceeCchhhccCCCC-chhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-Hh----cCCCCCCCCCCCHH
Confidence              2233567889999999876664 56999999999999998 9999987655433222 11    12233444568999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..||.+|||+.+++++
T Consensus       243 l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          243 LYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.97  E-value=4.1e-31  Score=225.42  Aligned_cols=161  Identities=19%  Similarity=0.310  Sum_probs=121.3

Q ss_pred             ccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC--
Q 024572            3 LGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP--   70 (265)
Q Consensus         3 ~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~--   70 (265)
                      +.+++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++........  
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kL~DfG~a~~~~~~~~~~~  175 (327)
T 3lzb_A           98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKEYH  175 (327)
T ss_dssp             CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE--EEECCTTC------------
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC--EEEccCcceeEccCcccccc
Confidence            34558988887642          3678899999999999999999999999987765  999999999754332221  


Q ss_pred             -CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 024572           71 -KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR  148 (265)
Q Consensus        71 -~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (265)
                       ....+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+...... ...+    ......+.+..++..+.
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~l~  249 (327)
T 3lzb_A          176 AEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSIL----EKGERLPQPPICTIDVY  249 (327)
T ss_dssp             ----CCCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHH----HTTCCCCCCTTBCHHHH
T ss_pred             ccCCCccccccCHHHHcCCCCC-hHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-HHHH----HcCCCCCCCccCCHHHH
Confidence             223467789999999887765 56999999999999999 9999987655432 2222    22333445557899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcC
Q 024572          149 NLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +||.+||..||.+|||+.++++.
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999999863

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=6.9e-31  Score=233.34  Aligned_cols=160  Identities=19%  Similarity=0.298  Sum_probs=127.3

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..++           ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++..... 
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~-  342 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASST-  342 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSC--EEECCCTTCEECC---
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCC--EEEeeCCCccccccc-
Confidence            688865 9999998654           2567889999999999999999999999987765  999999999744322 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       .....++..|+|||++.+..++ .++|||||||++|+|++ |+.||............     ......+.+..+++.+
T Consensus       343 -~~~~~~~~~y~aPE~~~~~~~~-~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l  415 (450)
T 1k9a_A          343 -QDTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKMDAPDGCPPAV  415 (450)
T ss_dssp             -----CCCTTTSCHHHHHSSCCC-HHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-----HTTCCCCCCTTCCHHH
T ss_pred             -ccCCCCCcceeCHHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHH
Confidence             2233578899999999887765 55999999999999998 99999876654433221     1223445556789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+||.+||..||.+|||+.++++
T Consensus       416 ~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          416 YDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.97  E-value=1.6e-31  Score=228.25  Aligned_cols=175  Identities=20%  Similarity=0.239  Sum_probs=121.8

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhc---------CceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQ---------QICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~---------~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ||++.+ +|.+++..+.        ++.+++.+|.|||++         ||+||||||+|||++.++.  +||+|||+++
T Consensus        91 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~--~kL~DFG~a~  168 (336)
T 3g2f_A           91 MEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT--CVISDFGLSM  168 (336)
T ss_dssp             ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC--EEECCCTTCE
T ss_pred             EecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc--EEEeecccee
Confidence            788854 9999987543        467889999999999         9999999999999987765  9999999997


Q ss_pred             cCCCC---------CCCCCCcCCCCCcccccccCC------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH-----
Q 024572           63 SSLLH---------SRPKSTVGTPAYIAPEVLSRR------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN-----  122 (265)
Q Consensus        63 ~~~~~---------~~~~~~~~~~~y~aPE~~~~~------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~-----  122 (265)
                      .....         .......||+.|+|||++.+.      ...+.++|||||||++|+|++|..||........     
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  248 (336)
T 3g2f_A          169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF  248 (336)
T ss_dssp             ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred             ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence            54322         112244699999999999763      1223568999999999999999777644322110     


Q ss_pred             ---------HHHHHHHHhhhcccCCCC------CCCCHHHHHHHHHhcccCCCCCCCHHHHhc------CcccCCC
Q 024572          123 ---------FRKTISRIMAVQYKIPDY------VHISQDCRNLLSRIFVANPSRRITIKEIKS------HPWFLKN  177 (265)
Q Consensus       123 ---------~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~L~~dP~~R~s~~ell~------h~~f~~~  177 (265)
                               .................+      ..+++.+.+||.+||..||.+|||+.++++      ++|-+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          249 QTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             hcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence                     011111111111111111      113457999999999999999999999954      5565543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=3e-31  Score=235.89  Aligned_cols=162  Identities=23%  Similarity=0.367  Sum_probs=128.6

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DFG~a~~~~~~~  338 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV--CKIADFGLARVIEDNE  338 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCC--EEECSTTGGGGBCCHH
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCc--EEEeeCCCceEcCCCc
Confidence            788865 9999987432           3677899999999999999999999999988765  9999999997543211


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                        ......++..|+|||++....++ .++|||||||++|+|++ |+.||.+.........    + ......+.+..+++
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~----i-~~~~~~~~~~~~~~  412 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA----L-ERGYRMPRPENCPE  412 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----H-HHTCCCCCCTTSCH
T ss_pred             eeccCCCcccccccCHHHhccCCCC-cHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH----H-HcCCCCCCCCCCCH
Confidence              12233467789999999877765 56999999999999999 9999987654333222    1 12344555667999


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       413 ~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          413 ELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHH
Confidence            9999999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.97  E-value=1.3e-31  Score=228.68  Aligned_cols=164  Identities=21%  Similarity=0.321  Sum_probs=129.9

Q ss_pred             Cccccc-chHHHHHHhc-----------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEe
Q 024572            1 MQLGVS-SLSEFVMLEG-----------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKIC   56 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~   56 (265)
                      ||++.+ +|.+++..+.                       ++.+++.+|.|||++||+||||||+|||++.++.  +||+
T Consensus       129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~  206 (333)
T 2i1m_A          129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV--AKIG  206 (333)
T ss_dssp             EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGE--EEBC
T ss_pred             EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCe--EEEC
Confidence            688765 9999987543                       3567899999999999999999999999987765  9999


Q ss_pred             ccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhh
Q 024572           57 DFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMA  132 (265)
Q Consensus        57 Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~  132 (265)
                      |||+++.......   .....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+............    
T Consensus       207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----  281 (333)
T 2i1m_A          207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK----  281 (333)
T ss_dssp             CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH----
T ss_pred             ccccccccccccceeecCCCCCCccccCHHHhccCCCC-hHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh----
Confidence            9999875433221   2234467889999999877665 56999999999999998 9999988765544443332    


Q ss_pred             hcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          133 VQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       133 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .....+.+..++..+.+||.+||..||.+|||+.+++++
T Consensus       282 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          282 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            233344445678999999999999999999999999873

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=2.4e-31  Score=231.11  Aligned_cols=162  Identities=25%  Similarity=0.326  Sum_probs=126.5

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..++          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~--~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV--LKISDFGMSREEADGVY  268 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCGGGCEECTTSEE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCc--EEECcCCCceecCCCce
Confidence            78885 59999987654          3667889999999999999999999999987775  99999999874332211


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....++..|+|||++.+..++ .++|||||||++|+|++ |..||........ ...    .......+.+..++.
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~el~t~g~~p~~~~~~~~~-~~~----~~~~~~~~~~~~~~~  342 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRYS-SESDVWSFGILLWETFSLGASPYPNLSNQQT-REF----VEKGGRLPCPELCPD  342 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-HHH----HHTTCCCCCCTTCCH
T ss_pred             eecCCCCCCCcCcCCHhHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHH----HHcCCCCCCCCCCCH
Confidence               1122356779999999877764 55999999999999998 9999987654322 211    222334455557899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       343 ~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          343 AVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHH
Confidence            9999999999999999999999975

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=226.98  Aligned_cols=161  Identities=28%  Similarity=0.437  Sum_probs=109.7

Q ss_pred             CcccccchHHHHHHh------------ccccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVSSLSEFVMLE------------GSVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~sL~~~~~~~------------~~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.++|.+++...            .++.+++.+|.|||++|  |+||||||+|||++.++.  +||+|||+++....
T Consensus       113 ~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~~  190 (337)
T 3ll6_A          113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT--IKLCDFGSATTISH  190 (337)
T ss_dssp             EECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSC--EEBCCCTTCBCCSS
T ss_pred             EEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCC--EEEecCccceeccc
Confidence            789999999988651            23677899999999999  999999999999988775  99999999975443


Q ss_pred             CCCC-------------CCCcCCCCCccccccc---CCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHH
Q 024572           67 HSRP-------------KSTVGTPAYIAPEVLS---RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        67 ~~~~-------------~~~~~~~~y~aPE~~~---~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      ....             ....+|+.|+|||++.   +..+ +.++|||||||++|+|++|+.||.......        +
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~  261 (337)
T 3ll6_A          191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI-GEKQDIWALGCILYLLCFRQHPFEDGAKLR--------I  261 (337)
T ss_dssp             CC-------------------------------CCTTSCS-SHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred             cCcccccccccccchhhccccCCCCcCChhhhhccccCCC-ChHHhHHHHHHHHHHHHhCCCCCcchhHHH--------h
Confidence            2211             1345899999999983   3333 456999999999999999999997643321        1


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                      .......+.....+..+.+||.+||..||.+|||+.++++|.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             ----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            122233444456788899999999999999999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=3.4e-31  Score=224.92  Aligned_cols=163  Identities=20%  Similarity=0.280  Sum_probs=127.1

Q ss_pred             Cccccc-chHHHHHHhc-------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~   60 (265)
                      ||++.+ +|.+++....                   ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~--~kl~Dfg~  184 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT--VKIGDFGM  184 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC--EEECCTTC
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe--EEECcCcc
Confidence            688865 9999987532                   3667899999999999999999999999988765  99999999


Q ss_pred             cccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhccc
Q 024572           61 SKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        61 a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      ++......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |..||.........    ..+.... .
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~----~~~~~~~-~  258 (322)
T 1p4o_A          185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL----RFVMEGG-L  258 (322)
T ss_dssp             CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH----HHHHTTC-C
T ss_pred             ccccccccccccccCCCCCCCccChhhhccCCCC-chhhHHHHHHHHHHHHhcCCCccccCCHHHHH----HHHHcCC-c
Confidence            87443221   11233568899999999877664 56999999999999999 89999776543222    2222222 2


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+....++..+.+||.+||..||.+|||+.++++|
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            23345789999999999999999999999999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=6.1e-31  Score=222.61  Aligned_cols=163  Identities=18%  Similarity=0.275  Sum_probs=122.3

Q ss_pred             Cccccc-chHHHHHHh---------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLE---------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~---------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ +|.+++...               .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++..
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~--~kl~Dfg~~~~~  197 (313)
T 3brb_A          120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT--VCVADFGLSKKI  197 (313)
T ss_dssp             EECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC--EEECSCSCC---
T ss_pred             EecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc--EEEeecCcceec
Confidence            567765 898888432               24677899999999999999999999999988765  999999998754


Q ss_pred             CCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCC
Q 024572           65 LLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDY  140 (265)
Q Consensus        65 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (265)
                      ....   ......+++.|+|||.+.+..++ .++|||||||++|+|++ |..||.............    . ....+.+
T Consensus       198 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~----~-~~~~~~~  271 (313)
T 3brb_A          198 YSGDYYRQGRIAKMPVKWIAIESLADRVYT-SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL----H-GHRLKQP  271 (313)
T ss_dssp             -------------CCGGGSCHHHHHSSCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH----T-TCCCCCB
T ss_pred             ccccccCcccccCCCccccCchhhcCCCcc-chhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH----c-CCCCCCC
Confidence            3322   12233577889999999887765 55999999999999999 889998766544332221    1 2223344


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          141 VHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       141 ~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ..++..+.+||.+||..||.+|||+.+++++
T Consensus       272 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          272 EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5789999999999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=1.3e-30  Score=215.75  Aligned_cols=160  Identities=18%  Similarity=0.186  Sum_probs=126.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcC--ceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++....           ++.+++.++.|||++|  |+||||||+||+++.++.  ++|+|||++...  
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~--~~l~~~~~~~~~--  163 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT--ARISMADVKFSF--  163 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSC--EEEEGGGSCCTT--
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcc--eeEEeccceeee--
Confidence            688865 9999987653           2667899999999999  999999999999988776  888888876432  


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCC--chHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDG--KLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~--~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                        ......+|+.|+|||++.+..+..  .++|||||||++|+|++|+.||..........    .........+.+..++
T Consensus       164 --~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~  237 (271)
T 3kmu_A          164 --QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM----KVALEGLRPTIPPGIS  237 (271)
T ss_dssp             --SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH----HHHHSCCCCCCCTTCC
T ss_pred             --cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH----HHHhcCCCCCCCCCCC
Confidence              223457899999999998765543  26999999999999999999998765433322    2223333344455789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+.++|.+||..||.+|||+.++++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=3.2e-31  Score=221.14  Aligned_cols=163  Identities=20%  Similarity=0.290  Sum_probs=127.1

Q ss_pred             Ccccc-cchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGV-SSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++. ++|.+++...          .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... 
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~  175 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEY  175 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSC--EEECSTTGGGGBCCHHH
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCC--EEEcccccccccccccc
Confidence            68884 5999998752          23677899999999999999999999999987765  9999999987443221 


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                       ......+++.|+|||++.+..++ .++||||||+++|+|++ |+.||...........    +.. ......+..+++.
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~  249 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH----IAQ-GLRLYRPHLASEK  249 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCCS-HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----HHT-TCCCCCCTTCCHH
T ss_pred             ccccCCccCcccCCHHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCccccChhHHHHH----Hhc-ccCCCCCCcCCHH
Confidence             12233467889999999877764 56999999999999998 9999987654332222    222 2223334467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+||.+||..||.+|||+.++++|
T Consensus       250 l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          250 VYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHH
Confidence            9999999999999999999999976

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=6e-31  Score=228.33  Aligned_cols=162  Identities=19%  Similarity=0.318  Sum_probs=117.9

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~  202 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV--CKVSDFGLGRVLEDDPE  202 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCC-----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCC--EEECcCccccccccCCc
Confidence            78884 59999987643          3677899999999999999999999999988775  99999999875433221


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .    ....++..|+|||++.+..++ .++|||||||++|+|++ |+.||.........    ..+ ......+.+..++
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~----~~i-~~~~~~~~~~~~~  276 (373)
T 2qol_A          203 AAYTTRGGKIPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----KAV-DEGYRLPPPMDCP  276 (373)
T ss_dssp             -----------CTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH----HHH-HTTEECCCCTTCB
T ss_pred             cceeccCCCcCCCccChhhhccCCcC-chhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHH-HcCCCCCCCcccc
Confidence            1    112356789999999877765 55999999999999998 99999876543222    222 2233445555789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.+||.+||..||.+||++.++++
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            99999999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=2.9e-31  Score=226.10  Aligned_cols=169  Identities=17%  Similarity=0.237  Sum_probs=129.5

Q ss_pred             Cccc-ccchHHHHHHhc----------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcc
Q 024572            1 MQLG-VSSLSEFVMLEG----------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSK   62 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~----------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~   62 (265)
                      ||++ +++|.+++....                ++.+++.+|.|||++||+||||||+|||++.++ ...+||+|||+++
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence            6888 559999998653                356789999999999999999999999998433 2359999999986


Q ss_pred             cCCCC---CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCC
Q 024572           63 SSLLH---SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIP  138 (265)
Q Consensus        63 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  138 (265)
                      .....   .......+++.|+|||++.+..++ .++|||||||++|+|++ |+.||........    ...+... ....
T Consensus       192 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~~~~-~~~~  265 (327)
T 2yfx_A          192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT-SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV----LEFVTSG-GRMD  265 (327)
T ss_dssp             HHHC------CCGGGSCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH----HHHHHTT-CCCC
T ss_pred             ccccccccccCCCcCCCcceeCHhHhcCCCCC-chhhHHHHHHHHHHHHcCCCCCCCCcCHHHH----HHHHhcC-CCCC
Confidence            33221   122334578899999999877664 56999999999999998 9999987643322    2222222 2233


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ....++..+.+||.+||..||.+|||+.++++|.|+.
T Consensus       266 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          266 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            3446899999999999999999999999999987763

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=7.7e-31  Score=224.18  Aligned_cols=163  Identities=22%  Similarity=0.325  Sum_probs=127.6

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++.+++.+|.|||++||+||||||+|||++.++.  +|
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~k  197 (334)
T 2pvf_A          120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MK  197 (334)
T ss_dssp             EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EE
T ss_pred             EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCC--EE
Confidence            678865 9999987643                         3567899999999999999999999999987765  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++......   ......+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+...... ...+   
T Consensus       198 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~---  272 (334)
T 2pvf_A          198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKLL---  272 (334)
T ss_dssp             ECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHHH---
T ss_pred             EccccccccccccccccccCCCCcccceeChHHhcCCCcC-hHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-HHHH---
Confidence            99999987543322   12233567889999999877664 55999999999999999 9999987653322 2222   


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .. ....+.+..++..+.++|.+||..||.+|||+.+++++
T Consensus       273 ~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          273 KE-GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hc-CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            11 22233445789999999999999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.5e-30  Score=220.00  Aligned_cols=164  Identities=26%  Similarity=0.377  Sum_probs=121.6

Q ss_pred             Cccccc-chHHHHHHhc------------cccchHHHHHhhhh---cCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572            1 MQLGVS-SLSEFVMLEG------------SVKMKPDIFFSSLS---QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~------------~~~~i~~~l~~lH~---~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      ||++.+ +|.+++..+.            ++.+++.++.|||+   +||+||||||+||+++.++. .+||+|||++...
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~-~~kl~Dfg~~~~~  156 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT-VLKICDFGTACDI  156 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT-EEEECCCCC----
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC-EEEEccccccccc
Confidence            688855 9999987543            24577899999999   89999999999999987653 3799999998644


Q ss_pred             CCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           65 LLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        65 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      ..  ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||........  ...... ......+....++
T Consensus       157 ~~--~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~  230 (307)
T 2eva_A          157 QT--HMTNNKGSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAV-HNGTRPPLIKNLP  230 (307)
T ss_dssp             ----------CCTTSSCHHHHTCCCCC-THHHHHHHHHHHHHHHHTCCTTTTTCSSHH--HHHHHH-HTTCCCCCBTTCC
T ss_pred             cc--ccccCCCCCceEChhhhCCCCCC-cHHHHHHHHHHHHHHHHCCCCchhhCccHH--HHHHHH-hcCCCCCcccccC
Confidence            32  22344689999999999887765 559999999999999999999986543321  111111 1222334445789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ..+.+||.+||..||.+|||+.+++++
T Consensus       231 ~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          231 KPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            999999999999999999999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=2.7e-31  Score=222.15  Aligned_cols=162  Identities=17%  Similarity=0.201  Sum_probs=123.2

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCC------cEEEeccCCccc
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAP------RLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~------~vkl~Dfg~a~~   63 (265)
                      ||++. ++|.+++....          ++.+++.+|.|||++||+||||||+|||++.++..      .+||+|||++..
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~  170 (289)
T 4fvq_A           91 QEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT  170 (289)
T ss_dssp             EECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTT
T ss_pred             EECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCccccc
Confidence            78887 59999998654          36778999999999999999999999999766531      289999999864


Q ss_pred             CCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           64 SLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        64 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      ...   .....+++.|+|||++.+....+.++|||||||++|+|++|..|+.............    ......+  ...
T Consensus       171 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~----~~~~~~~--~~~  241 (289)
T 4fvq_A          171 VLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY----EDRHQLP--APK  241 (289)
T ss_dssp             TSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----HTTCCCC--CCS
T ss_pred             ccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh----hccCCCC--CCC
Confidence            322   1234578899999999874445667999999999999999655554444333222221    1222222  346


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +..+.+||.+||..||.+|||+.++++|
T Consensus       242 ~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          242 AAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             SCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            7889999999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=4.6e-31  Score=220.82  Aligned_cols=164  Identities=24%  Similarity=0.328  Sum_probs=127.6

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~  176 (291)
T 1u46_A           99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDD  176 (291)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEECCC-CC
T ss_pred             EecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCC--EEEcccccccccccccc
Confidence            56765 48988887642          3677899999999999999999999999987765  99999999875433221


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                          .....++..|+|||++.+..++ .++||||||+++|+|++ |+.||.......    ....+.......+....++
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~  251 (291)
T 1u46_A          177 HYVMQEHRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCP  251 (291)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCC
T ss_pred             chhhhccCCCCceeeCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCcccCCHHH----HHHHHHccCCCCCCCcCcC
Confidence                1233577789999999877664 56999999999999999 999998765432    2333333444455556789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ..+.++|.+||..||.+|||+.+++++
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999999999873

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.1e-31  Score=220.05  Aligned_cols=164  Identities=22%  Similarity=0.292  Sum_probs=128.0

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++...          .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY--AKISDFGLSKALGADDS  165 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE--EEECCCTTCEECTTCSC
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCC--EEECcccceeeeccCcc
Confidence            677765 898887532          24778899999999999999999999999987765  99999999875433221


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                          .....+++.|+|||++.+..++ .++|||||||++|+|++ |+.||..........    .+.. ....+.+..++
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----~i~~-~~~~~~~~~~~  239 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA----FIEQ-GKRMECPPECP  239 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH----HHHT-TCCCCCCTTCC
T ss_pred             eeeccccccccccccCHHHhccCCCC-chhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH----HHhc-CCcCCCCCCcC
Confidence                2233468899999999876664 55999999999999998 999998766543322    2222 22233345789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                      +.+.++|.+||..||.+|||+.+++++.
T Consensus       240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          240 PELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            9999999999999999999999999863

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.3e-31  Score=228.17  Aligned_cols=163  Identities=20%  Similarity=0.261  Sum_probs=119.1

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++...... 
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEF  247 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCC-----------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCC--EEEeecccccccccccc
Confidence            678866 9999987543          3567899999999999999999999999987765  9999999997543221 


Q ss_pred             ----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 ----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                          ......+++.|+|||++.+..++ .++|||||||++|+|++ |.+||............    .. ....+.+..+
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~----~~-~~~~~~p~~~  321 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQ-GRRLLQPEYC  321 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH----HT-TCCCCCCTTC
T ss_pred             ccccccCCCCCcccccChHHhcCCCCC-cHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH----Hc-CCCCCCCCCC
Confidence                11233467889999999877765 56999999999999999 67788766544332221    11 1223334468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +..+.++|.+||..||.+|||+.+++++
T Consensus       322 ~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          322 PDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=8.1e-31  Score=220.59  Aligned_cols=166  Identities=22%  Similarity=0.271  Sum_probs=127.2

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... 
T Consensus       104 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~  181 (302)
T 4e5w_A          104 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAIETDKE  181 (302)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTTCEECCTTCC
T ss_pred             EEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCC--EEECcccccccccCCCc
Confidence            688855 9999985442          3678899999999999999999999999987765  9999999997554332 


Q ss_pred             ---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----------ChHHHHHHHHHHhhhc
Q 024572           69 ---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQE-----------DPKNFRKTISRIMAVQ  134 (265)
Q Consensus        69 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~-----------~~~~~~~~~~~~~~~~  134 (265)
                         ......+|..|+|||++.+..++ .++|||||||++|+|++|..|+....           ......... ......
T Consensus       182 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  259 (302)
T 4e5w_A          182 YYTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV-NTLKEG  259 (302)
T ss_dssp             EEECCCCTTCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH-HHHHTT
T ss_pred             ceeccCCCCCCccccCCeeecCCCCC-cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH-HHHhcc
Confidence               22334578889999999887765 55999999999999999998864321           111111222 222233


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ...+.+..+++.+.+||.+||..||.+|||+.++++
T Consensus       260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            344555678999999999999999999999999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=3.3e-31  Score=225.76  Aligned_cols=167  Identities=20%  Similarity=0.291  Sum_probs=128.3

Q ss_pred             Cccc-ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLG-VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++ +++|.+++....          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++...... 
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~  182 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH--VKIADFGLAKLLPLDKD  182 (327)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCGGGCEECCTTCS
T ss_pred             EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCC--EEEcccccceecccCCc
Confidence            6888 559999987632          3667899999999999999999999999987765  9999999997543322 


Q ss_pred             ---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChH-----------HHHHHHHHHhhhc
Q 024572           69 ---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK-----------NFRKTISRIMAVQ  134 (265)
Q Consensus        69 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~-----------~~~~~~~~~~~~~  134 (265)
                         ......++..|+|||++.+..++ .++|||||||++|+|++|+.||.......           .... +.......
T Consensus       183 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  260 (327)
T 3lxl_A          183 YYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR-LLELLEEG  260 (327)
T ss_dssp             EEECSSCCCSCGGGSCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH-HHHHHHTT
T ss_pred             cceeeccCCccccccCHHHhccCCCC-hHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH-HHHHhhcc
Confidence               22334578889999999877664 56999999999999999999986532110           1111 11222233


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ...+.+..+++.+.+||.+||..||.+|||+.+++++
T Consensus       261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3445556789999999999999999999999999765

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.97  E-value=3.6e-31  Score=242.67  Aligned_cols=175  Identities=23%  Similarity=0.305  Sum_probs=129.3

Q ss_pred             Cccc-ccchHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCC-CcEEEeccCCcccCCC
Q 024572            1 MQLG-VSSLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~-~~vkl~Dfg~a~~~~~   66 (265)
                      ||++ +++|.+++....            ++.+++.++.|||++||+||||||+||+++.++. ..+||+|||++.....
T Consensus        97 mEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A           97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             EECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred             EEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence            6888 459999987643            3677899999999999999999999999986543 2489999999987665


Q ss_pred             CCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHH-----HHH-----hhhcc-
Q 024572           67 HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI-----SRI-----MAVQY-  135 (265)
Q Consensus        67 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~-----~~~-----~~~~~-  135 (265)
                      ........+++.|+|||++.+..++. ++|||||||++|+|++|..||........+....     ...     ..... 
T Consensus       177 ~~~~~~~~gt~~Y~APE~l~~~~~s~-ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~  255 (676)
T 3qa8_A          177 GELCTEFVGTLQYLAPELLEQKKYTV-TVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVK  255 (676)
T ss_dssp             CCCCCCCCSCCTTCSSCSSCCSCCST-THHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCC
T ss_pred             ccccccccCCcccCChHHhccCCCCc-hhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccc
Confidence            55556678999999999998877754 5999999999999999999997643221110000     000     00000 


Q ss_pred             ---cCCC----CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          136 ---KIPD----YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       136 ---~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                         ..+.    ...++..+.+||.+||..||.+|||+.++++||||+.
T Consensus       256 ~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          256 FSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             cccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence               1111    1125678999999999999999999999999999963

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=1.5e-30  Score=216.65  Aligned_cols=160  Identities=18%  Similarity=0.293  Sum_probs=121.8

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++...... 
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~-  170 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASST-  170 (278)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC--EEECCCCC--------
T ss_pred             EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCc--EEEeecccccccccc-
Confidence            688866 9999987543           3567899999999999999999999999987765  999999998743322 


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       .....+++.|+|||++.+..++ .++||||||+++|+|++ |+.||...........    +. .....+.+..+++.+
T Consensus       171 -~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~l  243 (278)
T 1byg_A          171 -QDTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR----VE-KGYKMDAPDGCPPAV  243 (278)
T ss_dssp             ------CCTTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH----HT-TTCCCCCCTTCCHHH
T ss_pred             -ccCCCccccccCHHHhCCCCCC-chhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----Hh-cCCCCCCcccCCHHH
Confidence             2334578899999999876664 55999999999999998 9999987654332221    11 222334445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .++|.+||..||.+|||+.++++
T Consensus       244 ~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          244 YEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcCChhhCCCHHHHHH
Confidence            99999999999999999999976

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.2e-30  Score=221.44  Aligned_cols=163  Identities=20%  Similarity=0.323  Sum_probs=123.1

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.          ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus       125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCCCC---------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCc--EEECCCCcchhhccccc
Confidence            688866 9999987642          3677899999999999999999999999987765  99999999875433221


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                          .....++..|+|||++.+..++ .++|||||||++|+|++ |+.||........    ...+. .....+.+..++
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~pf~~~~~~~~----~~~~~-~~~~~~~~~~~~  276 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEV----MKAIN-DGFRLPTPMDCP  276 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHHHH-TTCCCCCCTTCB
T ss_pred             cccccCCCCccccccCchhcccCCCC-chhhhHHHHHHHHHHHcCCCCCcccCCHHHH----HHHHH-CCCcCCCcccCC
Confidence                1122457789999999877765 55999999999999999 9999977654322    22222 223344555789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ..+.+||.+||..||.+||++.+++++
T Consensus       277 ~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          277 SAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=1.8e-30  Score=217.59  Aligned_cols=162  Identities=19%  Similarity=0.261  Sum_probs=125.4

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++. ++|.+++..+.         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++....... 
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  173 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY--AKISDFGLSKALRADENY  173 (291)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTTCEECCTTCSE
T ss_pred             EEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCc--EEEccCCcceeeccCCCc
Confidence            67776 48999987653         3677899999999999999999999999987765  99999999875433221 


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....+++.|+|||++.+..++ .++||||||+++|+|++ |+.||........ ..   .+.. ....+.+..++.
T Consensus       174 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~---~~~~-~~~~~~~~~~~~  247 (291)
T 1xbb_A          174 YKAQTHGKWPVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TA---MLEK-GERMGCPAGCPR  247 (291)
T ss_dssp             EEC----CCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HH---HHHT-TCCCCCCTTCCH
T ss_pred             ccccccCCCCceeeChHHhccCCCC-hhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-HH---HHHc-CCCCCCCCCCCH
Confidence               1223466889999999876664 56999999999999999 9999987654322 22   2221 222333457899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.++|.+||..||.+|||+.++++
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999999986

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.2e-30  Score=216.42  Aligned_cols=163  Identities=21%  Similarity=0.293  Sum_probs=124.7

Q ss_pred             Cccc-ccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--
Q 024572            1 MQLG-VSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--   67 (265)
Q Consensus         1 me~~-~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--   67 (265)
                      ||++ +++|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.....  
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFT--VKVADFGLARDILDREY  179 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--EEECCTTSSCTTTTGGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc--EEeCcCCCcccccCCcc
Confidence            4555 569999887522          3567899999999999999999999999987765  999999998744321  


Q ss_pred             ---CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           68 ---SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        68 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                         .......+++.|+|||.+.+..++ .++|||||||++|+|++|..|+............+.    .....+.+..++
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  254 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFT-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA----QGRRLPQPEYCP  254 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCC-HHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH----TTCCCCCCTTCC
T ss_pred             cccccCcCCCCCccccChhhhccCCCC-hhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh----cCCCCCCCccch
Confidence               222334578899999999887765 559999999999999996666554444433333222    222334455689


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ..+.+||.+||..||.+|||+.++++
T Consensus       255 ~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          255 DSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=2.8e-31  Score=223.51  Aligned_cols=155  Identities=30%  Similarity=0.517  Sum_probs=113.4

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++..+.           ++.+++.++.|||++||+||||||+|||++... .+.+||+|||++....  
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~--  171 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--  171 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence            788865 9999998754           367789999999999999999999999998732 2359999999886322  


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  145 (265)
                                         +..+ +.++|||||||++|+|++|+.||...............+.......+  .+..+++
T Consensus       172 -------------------~~~~-~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          172 -------------------GEKY-DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             -------------------TCGG-GGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCH
T ss_pred             -------------------cccC-CchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCH
Confidence                               1223 35699999999999999999999765432111000001111111111  1145789


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      .+.+||.+||..||.+|||+.++++||||++.
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence            99999999999999999999999999999753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.97  E-value=2.4e-30  Score=217.39  Aligned_cols=162  Identities=20%  Similarity=0.263  Sum_probs=123.5

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||++.+ +|.+++....          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++...... 
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~  183 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEY  183 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--EEECSCGGGCCCSCGGG
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCC--EEECcccccccccccch
Confidence            678876 9999986533          3567899999999999999999999999987765  9999999997543221 


Q ss_pred             ----CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 ----RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                          ......+++.|+|||.+.+..++ .++|||||||++|+|++ |.+||............    .. ......+..+
T Consensus       184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~  257 (298)
T 3f66_A          184 YSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQ-GRRLLQPEYC  257 (298)
T ss_dssp             CBC-----CCBCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH----HT-TCCCCCCTTC
T ss_pred             hccccccCCCCCccccChHHhcCCCCC-hHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH----hc-CCCCCCCccC
Confidence                22234577889999999877765 56999999999999999 56666655443332222    11 1222334468


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +..+.++|.+||..||.+|||+.++++
T Consensus       258 ~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          258 PDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=2.5e-30  Score=219.23  Aligned_cols=164  Identities=18%  Similarity=0.191  Sum_probs=122.2

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC---
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL---   66 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~---   66 (265)
                      ||++. ++|.+++....          ++.+++.++.|||++||+||||||+||+++ ++  .+||+|||+++....   
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~--~~~l~Dfg~~~~~~~~~~  184 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NG--KVVITDFGLFSISGVLQA  184 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC-------
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CC--CEEEeecCCccccccccc
Confidence            78886 48998887543          367789999999999999999999999997 33  499999999764321   


Q ss_pred             ---CCCCCCCcCCCCCcccccccCC--------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc
Q 024572           67 ---HSRPKSTVGTPAYIAPEVLSRR--------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY  135 (265)
Q Consensus        67 ---~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  135 (265)
                         ........|++.|+|||++.+.        ...+.++|||||||++|+|++|+.||.........    ..+.....
T Consensus       185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~  260 (319)
T 2y4i_B          185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII----WQMGTGMK  260 (319)
T ss_dssp             ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH----HHHHTTCC
T ss_pred             cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHhccCCC
Confidence               1122334588999999998752        22356699999999999999999999876543222    22222222


Q ss_pred             cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          136 KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       136 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .......++..+.++|.+||..||.+|||+.++++.
T Consensus       261 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          261 PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            222233578899999999999999999999999873

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=6.9e-32  Score=229.37  Aligned_cols=169  Identities=19%  Similarity=0.158  Sum_probs=122.3

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++...             .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++....
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~  191 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV--PKITDFGISKKGTE  191 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCC--EEECCCTTCEECSS
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCC--EEEeeccccccccc
Confidence            677754 887776432             34677899999999999999999999999987765  99999999875332


Q ss_pred             CC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHH-HHhhhccc----
Q 024572           67 HS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKN--FRKTIS-RIMAVQYK----  136 (265)
Q Consensus        67 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~--~~~~~~-~~~~~~~~----  136 (265)
                      ..   ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||........  ...... ........    
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (321)
T 2qkw_B          192 LDQTHLSTVVKGTLGYIDPEYFIKGRLT-EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD  270 (321)
T ss_dssp             SSCCCCBCCCEEETTTCCHHHHHHCBCC-THHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred             ccccccccccCCCccccCHHHhcCCCCC-cccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence            21   12234589999999999877765 559999999999999999999976543221  111111 11111100    


Q ss_pred             ----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          137 ----IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       137 ----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                          ......++..+.+++.+||..||.+|||+.+++++.
T Consensus       271 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                001112456788999999999999999999999763

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=1.3e-30  Score=221.26  Aligned_cols=167  Identities=22%  Similarity=0.277  Sum_probs=127.8

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~---   68 (265)
                      ||++.+ +|.+++..+.        ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......   
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~  191 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYY  191 (318)
T ss_dssp             ECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCGGGCEECCTTCSEE
T ss_pred             EecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCC--EEECCcccccccccccccc
Confidence            688865 9999876543        4778899999999999999999999999988765  9999999997554332   


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCCh----------HHHHHHHHHHhhhcccC
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDP----------KNFRKTISRIMAVQYKI  137 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~----------~~~~~~~~~~~~~~~~~  137 (265)
                       ......++..|+|||++.+..++ .++|||||||++|+|++|+.||......          ......+..........
T Consensus       192 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T 3lxp_A          192 RVREDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL  270 (318)
T ss_dssp             EC---CCCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC
T ss_pred             ccccCCCCCceeeChHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC
Confidence             12334578889999999887765 5699999999999999999998653211          11111122222333344


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          138 PDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       138 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+..++..+.+||.+||..||.+|||+.++++
T Consensus       271 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          271 PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            555678999999999999999999999999985

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.97  E-value=1.6e-30  Score=231.16  Aligned_cols=162  Identities=19%  Similarity=0.287  Sum_probs=124.1

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~~  334 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNE  334 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCCTTC------
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCC--EEECCCccceecCCCc
Confidence            788865 999998643           23667899999999999999999999999987765  9999999997543221


Q ss_pred             C--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 R--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .  .....++..|+|||++.+..++ .++|||||||++|+|++ |+.||.+.......    ..+ ......+.+..+++
T Consensus       335 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~----~~i-~~~~~~~~~~~~~~  408 (452)
T 1fmk_A          335 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQV-ERGYRMPCPPECPE  408 (452)
T ss_dssp             --------CCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH----HHH-HTTCCCCCCTTSCH
T ss_pred             eecccCCcccccccCHhHHhcCCCC-ccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH----HHH-HcCCCCCCCCCCCH
Confidence            1  1223467889999999877765 56999999999999999 99999876543322    222 22334555567899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=1.9e-30  Score=216.00  Aligned_cols=162  Identities=20%  Similarity=0.308  Sum_probs=126.1

Q ss_pred             Ccccc-cchHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++...           .++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++......
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~  163 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS--CKIADFGLARLIEDNE  163 (279)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECSSSC
T ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCC--EEECCCcccccccCcc
Confidence            67774 5999887643           23678899999999999999999999999987765  9999999987544322


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                        ......++..|+|||++.+..++ .++||||||+++|+|++ |+.||.+.......    ..+. .......+..++.
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~  237 (279)
T 1qpc_A          164 YTAREGAKFPIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLE-RGYRMVRPDNCPE  237 (279)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH----HHHH-TTCCCCCCTTCCH
T ss_pred             cccccCCCCccCccChhhhccCCCC-chhhhHHHHHHHHHHHhCCCCCCcccCHHHHH----HHHh-cccCCCCcccccH
Confidence              12233567889999999876664 55999999999999999 99999876543322    2222 1223334457899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       238 ~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          238 ELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999999976

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=2.3e-30  Score=218.76  Aligned_cols=166  Identities=23%  Similarity=0.346  Sum_probs=118.3

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++...             .++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~--~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSS  188 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCC--------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCC--EEEEeccceeeecC
Confidence            678876 899888642             24678899999999999999999999999987765  99999999875433


Q ss_pred             CC-CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           67 HS-RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        67 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .. ......+++.|+|||++.+..++ .++||||||+++|+|++|+.||.+....  .......+............++.
T Consensus       189 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  265 (310)
T 2wqm_A          189 KTTAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSE  265 (310)
T ss_dssp             ----------CCSSCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTC---CC--HHHHHHHHHTTCSCCCCTTTSCH
T ss_pred             CCccccccCCCeeEeChHHhCCCCCC-chhhHHHHHHHHHHHHhCCCCCcccchh--HHHHHHHhhcccCCCCcccccCH
Confidence            22 22334689999999999887664 5599999999999999999999765432  12223333333333223346899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.+||.+||..||.+|||+.+++++
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999999999863

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=1.8e-30  Score=216.96  Aligned_cols=162  Identities=20%  Similarity=0.309  Sum_probs=127.5

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....           ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.......
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDT  165 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGC--EEECCCCGGGTSCSSS
T ss_pred             EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCC--EEEccCccceeccCCc
Confidence            67887 59999987532           2567899999999999999999999999987765  9999999987544322


Q ss_pred             C--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 R--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                      .  .....+++.|+|||++.+..++ .++||||||+++|+|++ |..||......... ..+    ......+.+..+++
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~-~~~----~~~~~~~~~~~~~~  239 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELL----EKDYRMERPEGCPE  239 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHH----HTTCCCCCCTTCCH
T ss_pred             cccccCCccccCcCChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHH----hccCCCCCCCCCCH
Confidence            1  1223467889999999877764 56999999999999999 99999876543322 222    22233444557899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       240 ~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          240 KVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhCCChhhCcCHHHHHH
Confidence            9999999999999999999999976

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=1.9e-30  Score=214.42  Aligned_cols=163  Identities=20%  Similarity=0.333  Sum_probs=126.8

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--   67 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--   67 (265)
                      ||++. ++|.+++..+.          ++.+++.++.|||++||+||||||+||+++.++.  +||+|||+++.....  
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~--~kl~dfg~~~~~~~~~~  159 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQY  159 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGC--EEECCTTGGGGBCCHHH
T ss_pred             EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCC--EEEcccccccccccccc
Confidence            68885 49999987643          3567899999999999999999999999987765  999999998754321  


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .......++..|+|||++.+..++ .++||||||+++|+|++ |+.||.........    ..+.. ......+..++..
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~----~~i~~-~~~~~~~~~~~~~  233 (267)
T 3t9t_A          160 TSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV----EDIST-GFRLYKPRLASTH  233 (267)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH----HHHHT-TCCCCCCTTSCHH
T ss_pred             cccccccccccccChhhhcCCCcc-chhchhhhHHHHHHHhccCCCCCCCCCHHHHH----HHHhc-CCcCCCCccCcHH
Confidence            112234567889999999876664 56999999999999999 89999876543222    22222 2223334467899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.++|.+||..||.+|||+.+++++
T Consensus       234 l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          234 VYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999999874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=1.5e-30  Score=222.69  Aligned_cols=169  Identities=21%  Similarity=0.235  Sum_probs=124.6

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhh--------hcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSL--------SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH--------~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++....        ++.+++.++.|||        ++||+||||||+|||++.++.  +||+|||+++.
T Consensus       119 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~~~~  196 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVR  196 (342)
T ss_dssp             ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC--EEECCCTTCEE
T ss_pred             EeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC--EEEEECCCcee
Confidence            688876 9999987543        3677899999999        999999999999999988775  99999999865


Q ss_pred             CCCCC-----CCCCCcCCCCCcccccccCCcCC-----CchHhHHHHHHHHHHHHhC----------CCCCCCCCChH-H
Q 024572           64 SLLHS-----RPKSTVGTPAYIAPEVLSRREYD-----GKLADVWSCGVTLYVMLVG----------AYPFEDQEDPK-N  122 (265)
Q Consensus        64 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~-----~~~~DiwslG~~l~~ll~g----------~~pf~~~~~~~-~  122 (265)
                      .....     ......+|+.|+|||++.+....     +.++|||||||++|+|++|          ..||....... .
T Consensus       197 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~  276 (342)
T 1b6c_B          197 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  276 (342)
T ss_dssp             EETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCccc
Confidence            43332     23445799999999999765322     1469999999999999999          78887653221 1


Q ss_pred             HHHHHHHHhhhcccCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          123 FRKTISRIMAVQYKIPDY-----VHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .......+.........+     ..++..+.+||.+||..||.+|||+.++++|
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          277 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            122222222222211111     1234578999999999999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=2e-30  Score=232.97  Aligned_cols=162  Identities=19%  Similarity=0.306  Sum_probs=128.4

Q ss_pred             Ccccc-cchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++. ++|.+++....           ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDT  372 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC--EEECCTTCEECCTTCC
T ss_pred             EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc--EEEeecccceeccCCc
Confidence            78887 49999987532           2567899999999999999999999999987765  9999999997543322


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                        ......++..|+|||++.+..++ .++|||||||++|+|++ |..||.+....... ..    .......+.+..++.
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~-~~----~~~~~~~~~~~~~~~  446 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-EL----LEKDYRMERPEGCPE  446 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HH----HHTTCCCCCCTTCCH
T ss_pred             eeecCCCcCCcceeCHhHHhcCCCC-cHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HH----HHcCCCCCCCCCCCH
Confidence              11223466789999999877765 55999999999999999 99999876544322 22    222344455567899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       447 ~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          447 KVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHH
Confidence            9999999999999999999999976

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=1.9e-30  Score=218.94  Aligned_cols=167  Identities=23%  Similarity=0.280  Sum_probs=123.4

Q ss_pred             Cccc-ccchHHHHHHh------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLG-VSSLSEFVMLE------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~-~~sL~~~~~~~------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++ +++|.+++...            .++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~~~  186 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT--AKISDFGLARASEKF  186 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECCSC
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCc--EEEeecccccccccc
Confidence            6777 45898888632            23677899999999999999999999999987765  999999998754332


Q ss_pred             CC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--------c
Q 024572           68 SR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--------K  136 (265)
Q Consensus        68 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------~  136 (265)
                      ..   .....|++.|+|||++.+. + +.++|||||||++|+|++|..||...........+...+.....        .
T Consensus       187 ~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (307)
T 2nru_A          187 AQTVMTSRIVGTTAYMAPEALRGE-I-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK  264 (307)
T ss_dssp             SSCEECSSCCSCGGGCCHHHHTTE-E-CTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSS
T ss_pred             cccccccccCCCcCcCChHHhcCC-C-CccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccc
Confidence            21   2334689999999998763 4 45699999999999999999999876543332222222211110        0


Q ss_pred             C-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          137 I-PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       137 ~-~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      . ......+..+.++|.+||..||.+|||+.+++++
T Consensus       265 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          265 MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            0 1112245678999999999999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=5e-30  Score=235.68  Aligned_cols=162  Identities=22%  Similarity=0.287  Sum_probs=124.7

Q ss_pred             Cccccc-chHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+          .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~--vkL~DFGla~~~~~~~~  491 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY--AKISDFGLSKALGADDS  491 (613)
T ss_dssp             EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCCSTTTTCC----
T ss_pred             EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCc--EEEeeccCcccccCCCc
Confidence            688866 899988533          23677899999999999999999999999987765  99999999975433221


Q ss_pred             C----CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 P----KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                      .    ....+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+........    .+. .....+.+..++
T Consensus       492 ~~~~~~~~~~~~~y~APE~~~~~~~~-~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~----~i~-~~~~~~~p~~~~  565 (613)
T 2ozo_A          492 YYTARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA----FIE-QGKRMECPPECP  565 (613)
T ss_dssp             ----------CCTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH----HHH-TTCCCCCCTTCC
T ss_pred             eeeeccCCCCccceeCHhhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----HHH-cCCCCCCCCcCC
Confidence            1    122356789999999877765 55999999999999998 999998876644322    222 223344455789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+.+||.+||..||.+||++.++++
T Consensus       566 ~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          566 PELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999999864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=3.2e-30  Score=237.70  Aligned_cols=162  Identities=19%  Similarity=0.252  Sum_probs=125.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.+ +|.+++..+.         ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....... 
T Consensus       448 ~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~--~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY--AKISDFGLSKALRADENY  525 (635)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCTTHHHHTTC----
T ss_pred             EEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCC--EEEEEcCCccccccCccc
Confidence            788865 8999987643         3678899999999999999999999999998775  99999999975433221 


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....+++.|+|||++.+..++ .++|||||||++|+|++ |+.||.+.......    ..+. .....+.+..++.
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~~~~~-~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~----~~i~-~~~~~~~p~~~~~  599 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT----AMLE-KGERMGCPAGCPR  599 (635)
T ss_dssp             ---------CGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH----HHHH-TTCCCCCCTTCCH
T ss_pred             cccccCCCCceeeeChhhhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHH-cCCCCCCCCCCCH
Confidence               1223467889999999887765 55999999999999998 99999876543322    2222 2233444557899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||.+|||+.++++
T Consensus       600 ~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          600 EMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999999999975

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=6e-30  Score=217.90  Aligned_cols=167  Identities=18%  Similarity=0.242  Sum_probs=126.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.+|.|||++||+||||||+||+++.++.  +||+|||+++.......
T Consensus       123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~--~kL~Dfg~~~~~~~~~~  200 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKE  200 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEECCSSCS
T ss_pred             EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCc--EEEecCcchhhcccccc
Confidence            688855 9999987653          2667899999999999999999999999987765  99999999875443321


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCC-----------hHHHHHHHHHHhhhc
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQED-----------PKNFRKTISRIMAVQ  134 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~  134 (265)
                          .....++..|+|||++.+..++ .++|||||||++|+|++|..||.....           .......+.......
T Consensus       201 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (326)
T 2w1i_A          201 YYKVKEPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN  279 (326)
T ss_dssp             EEECSSCCSCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred             ccccccCCCCceeEECchhhcCCCCC-chhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence                2233567789999999877664 569999999999999999998864210           011111112222223


Q ss_pred             ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          135 YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       135 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ...+.+..++..+.+||.+||..||.+|||+.++++
T Consensus       280 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            334455678999999999999999999999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=4.8e-30  Score=217.01  Aligned_cols=163  Identities=23%  Similarity=0.297  Sum_probs=116.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      ||++.+ +|.+++....         ++.+++.++.|||++||+||||||+||+++.++.  +||+|||++.......  
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF--AYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECSCCC----------
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCC--EEEecCccCccccccccc
Confidence            678865 9999987654         3677899999999999999999999999987765  9999999987543322  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-cCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-KIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  147 (265)
                      ......+++.|+|||++.+..++. ++||||||+++|+|++|+.||...... .....   +..... .......++..+
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~l  265 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESHATY-RADIYALTCVLYECLTGSPPYQGDQLS-VMGAH---INQAIPRPSTVRPGIPVAF  265 (309)
T ss_dssp             ------CCGGGCCGGGTCC----C-CCHHHHHHHHHHHHHHSSCSSCSCHHH-HHHHH---HHSCCCCGGGTSTTCCTHH
T ss_pred             cccccCCCcCccCHHHHcCCCCCc-hHhHHHHHHHHHHHHHCCCCCCCchHH-HHHHH---hccCCCCccccCCCCCHHH
Confidence            223456899999999998876654 499999999999999999999875322 11111   111111 111234688999


Q ss_pred             HHHHHHhcccCCCCCC-CHHHHhc
Q 024572          148 RNLLSRIFVANPSRRI-TIKEIKS  170 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~-s~~ell~  170 (265)
                      .++|.+||..||.+|| ++.++++
T Consensus       266 ~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          266 DAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHHhccCCHHHHHHhHHHHHH
Confidence            9999999999999999 8888775

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.96  E-value=4e-31  Score=231.20  Aligned_cols=169  Identities=22%  Similarity=0.337  Sum_probs=124.6

Q ss_pred             Ccccc-cchHHHHHHhc------------cccchHHHHHhhhhcCceecCCCcCcEEE----cCCCCCcEEEeccCCccc
Q 024572            1 MQLGV-SSLSEFVMLEG------------SVKMKPDIFFSSLSQQICHRDLKLENTLL----DGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll----~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++. ++|.+++....            ++.+++.+|.|||++||+||||||+|||+    +.++  .+||+|||+++.
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~--~~kL~DFG~a~~  165 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQS--VYKLTDFGAARE  165 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCE--EEEECCGGGCEE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCce--eEEEecCCCceE
Confidence            78885 48988876533            36788999999999999999999999998    4443  499999999986


Q ss_pred             CCCCCCCCCCcCCCCCcccccccCC-------cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-
Q 024572           64 SLLHSRPKSTVGTPAYIAPEVLSRR-------EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-  135 (265)
Q Consensus        64 ~~~~~~~~~~~~~~~y~aPE~~~~~-------~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-  135 (265)
                      ...........||+.|+|||++.+.       ...+.++|||||||++|+|++|+.||............+..+..... 
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (396)
T ss_dssp             CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred             ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence            5554444556799999999998652       22245699999999999999999999765433332333333332211 


Q ss_pred             ------------------cCCCCC----CCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          136 ------------------KIPDYV----HISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       136 ------------------~~~~~~----~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                                        ..+...    .++..+.++|.+||..||.+|||+.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence                              111111    234578899999999999999999998653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=8.6e-31  Score=221.98  Aligned_cols=165  Identities=23%  Similarity=0.258  Sum_probs=123.4

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL   66 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~   66 (265)
                      ||++.+ +|.+++...             .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~  186 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQ--PVLMDLGSMNQACI  186 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCSSCEESCE
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCC--EEEEecCcchhccc
Confidence            677776 999888762             13678899999999999999999999999987765  99999998864322


Q ss_pred             CCCC----------CCCcCCCCCcccccccCCcC--CCchHhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHHHHHhhh
Q 024572           67 HSRP----------KSTVGTPAYIAPEVLSRREY--DGKLADVWSCGVTLYVMLVGAYPFEDQEDP-KNFRKTISRIMAV  133 (265)
Q Consensus        67 ~~~~----------~~~~~~~~y~aPE~~~~~~~--~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~  133 (265)
                      ....          ....|++.|+|||++.+...  .+.++|||||||++|+|++|+.||...... .....    ....
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~  262 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL----AVQN  262 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH----HHHC
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH----Hhhc
Confidence            1110          12246899999999876432  245699999999999999999999531100 01111    1112


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ....+....++..+.+||.+||..||.+|||+.+++++
T Consensus       263 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          263 QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            33445555789999999999999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.96  E-value=9.5e-31  Score=222.65  Aligned_cols=170  Identities=19%  Similarity=0.170  Sum_probs=123.4

Q ss_pred             Cccccc-chHHHHHHhc-------------cccchHHHHHhhhhc---CceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG-------------SVKMKPDIFFSSLSQ---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------~~~~i~~~l~~lH~~---~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||++.+ +|.+++..+.             ++.+++.+|.|||++   ||+||||||+|||++.++.  +||+|||+++.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~~~~  183 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFGLAKL  183 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC--EEECCCSSCEE
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC--EEeccCccccc
Confidence            677765 9999887543             367788999999999   9999999999999988765  99999999975


Q ss_pred             CCCCCC--CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCC----CChHHHHHHHHHHhhhcc--
Q 024572           64 SLLHSR--PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ----EDPKNFRKTISRIMAVQY--  135 (265)
Q Consensus        64 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~----~~~~~~~~~~~~~~~~~~--  135 (265)
                      ......  .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||...    .........+........  
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (326)
T 3uim_A          184 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSS-EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE  262 (326)
T ss_dssp             CCSSSSCEECCCCSCGGGCCHHHHHHSEEC-HHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCST
T ss_pred             cCcccccccccccCCcCccCHHHhccCCCC-ccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhh
Confidence            432222  2334589999999999877764 5699999999999999999999521    111111111111111000  


Q ss_pred             -------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 024572          136 -------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW  173 (265)
Q Consensus       136 -------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~  173 (265)
                             ........+..+.+++.+||..||.+|||+.++++|..
T Consensus       263 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             TSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             hhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                   00001112367899999999999999999999998753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.96  E-value=2.5e-30  Score=223.60  Aligned_cols=157  Identities=17%  Similarity=0.161  Sum_probs=118.7

Q ss_pred             Ccccc-cchHHHHHHh--------------ccccchHHHHHhhhhcCceecCCCcCcEEEcC-----------CCCCcEE
Q 024572            1 MQLGV-SSLSEFVMLE--------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDG-----------SPAPRLK   54 (265)
Q Consensus         1 me~~~-~sL~~~~~~~--------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-----------~~~~~vk   54 (265)
                      ||++. ++|.+++...              .++.+++.+|.|||++|||||||||+|||++.           ++  .+|
T Consensus       146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~--~~k  223 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA--GLA  223 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CT--TEE
T ss_pred             EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccC--CEE
Confidence            78886 4999999742              24678899999999999999999999999976           44  499


Q ss_pred             EeccCCcccCC---CCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh
Q 024572           55 ICDFGYSKSSL---LHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM  131 (265)
Q Consensus        55 l~Dfg~a~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~  131 (265)
                      |+|||+|+...   ........+||+.|+|||++.+..++ .++|||||||++|+|++|+.||........         
T Consensus       224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~pf~~~~~~~~---------  293 (365)
T 3e7e_A          224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWN-YQIDYFGVAATVYCMLFGTYMKVKNEGGEC---------  293 (365)
T ss_dssp             ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBS-THHHHHHHHHHHHHHHHSSCCCEEEETTEE---------
T ss_pred             EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCC-ccccHHHHHHHHHHHHhCCCccccCCCCce---------
Confidence            99999996432   22233455799999999999988765 559999999999999999999965432110         


Q ss_pred             hhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          132 AVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ......+. ...++.+.+++.+||..+|.+|++..+.+.
T Consensus       294 ~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          294 KPEGLFRR-LPHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             EECSCCTT-CSSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             eechhccc-cCcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence            00011111 124677899999999999999976544444

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=6.3e-30  Score=231.71  Aligned_cols=163  Identities=19%  Similarity=0.288  Sum_probs=128.0

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+           .++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~  417 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNE  417 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCTTSTTTCCCHH
T ss_pred             eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCc--EEEcccccceecCCCc
Confidence            788865 999998643           23667899999999999999999999999987765  9999999997543211


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                        ......++..|+|||++.+..++ .++|||||||++|+|++ |+.||.+.......    ..+ ......+.+..++.
T Consensus       418 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~----~~i-~~~~~~~~~~~~~~  491 (535)
T 2h8h_A          418 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQV-ERGYRMPCPPECPE  491 (535)
T ss_dssp             HHTTCSTTSCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH----HHH-HTTCCCCCCTTCCH
T ss_pred             eecccCCcCcccccCHHHhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHH-HcCCCCCCCCCCCH
Confidence              12233467889999999877764 56999999999999999 99999876543322    222 22334455567899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.+||.+||..||.+|||+.+|++.
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~l~~~  517 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEYLQAF  517 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999999999863

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=1.5e-29  Score=234.08  Aligned_cols=163  Identities=23%  Similarity=0.382  Sum_probs=125.9

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.          ++.+++.+|.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~--vkL~DFG~a~~~~~~~~  546 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTY  546 (656)
T ss_dssp             EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCCCCCCSCCC---
T ss_pred             EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC--EEEEecCCCeecCCCcc
Confidence            788874 9999988653          2567899999999999999999999999987765  99999999975533322


Q ss_pred             C--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 P--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 ~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      .  ....+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+........    .+.. ....+.+..+++.
T Consensus       547 ~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~----~i~~-~~~~~~~~~~~~~  620 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG----RIEN-GERLPMPPNCPPT  620 (656)
T ss_dssp             -------CCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHH-TCCCCCCTTCCHH
T ss_pred             eeccCCCCCcceeCHHHhcCCCCC-chhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHc-CCCCCCCccccHH
Confidence            1  223467889999999877664 56999999999999997 999998765433222    2222 2233444578999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+||.+||..||.+|||+.++++.
T Consensus       621 l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          621 LYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999999999999999999999863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.95  E-value=1.4e-29  Score=216.51  Aligned_cols=148  Identities=12%  Similarity=0.125  Sum_probs=109.0

Q ss_pred             HhccccchHHHHHhhh-hcCceecCCCcCcEEEcCCCC------------------CcEEEeccCCcccCCCCCCCCCCc
Q 024572           14 LEGSVKMKPDIFFSSL-SQQICHRDLKLENTLLDGSPA------------------PRLKICDFGYSKSSLLHSRPKSTV   74 (265)
Q Consensus        14 ~~~~~~~i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~------------------~~vkl~Dfg~a~~~~~~~~~~~~~   74 (265)
                      .+.++.|++.+|.||| ++||+||||||+|||++.++.                  ..+||+|||+|+....    ...+
T Consensus       163 ~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~----~~~~  238 (336)
T 2vuw_A          163 AKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD----GIVV  238 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET----TEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC----CcEE
Confidence            3445888999999999 999999999999999987651                  1599999999975432    2457


Q ss_pred             CCCCCcccccccCCcCCCchHhHHHHHHH-HHHHHhCCCCCCCCCChHHHHHHHHHHhh-hcccCCC----CCCCCHHHH
Q 024572           75 GTPAYIAPEVLSRREYDGKLADVWSCGVT-LYVMLVGAYPFEDQEDPKNFRKTISRIMA-VQYKIPD----YVHISQDCR  148 (265)
Q Consensus        75 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~-l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~  148 (265)
                      ||+.|+|||++.+..  +.++||||+|++ .+++++|..||.....   .......+.. .......    +..++++++
T Consensus       239 gt~~y~aPE~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  313 (336)
T 2vuw_A          239 FCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLW---LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQ  313 (336)
T ss_dssp             CCCCTTCSGGGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHH---HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHH
T ss_pred             EeecccChhhhcCCC--ccceehhhhhCCCCcccccccCCCcchhh---hhHHHHhhhhhhccCcccchhhhhhcCHHHH
Confidence            999999999998765  567999998776 7778889999843110   0111112111 1111111    124678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHh-cCcccC
Q 024572          149 NLLSRIFVANPSRRITIKEIK-SHPWFL  175 (265)
Q Consensus       149 ~li~~~L~~dP~~R~s~~ell-~h~~f~  175 (265)
                      +||.+||.+|     |+.++| +||||+
T Consensus       314 dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          314 EFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             HHHHHHhccC-----CHHHHHhcCCCcC
Confidence            9999999976     999999 999995

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.4e-28  Score=227.26  Aligned_cols=154  Identities=21%  Similarity=0.156  Sum_probs=117.4

Q ss_pred             Cccccc-chHHHHH-------HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVS-SLSEFVM-------LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~-sL~~~~~-------~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||++.+ +|.+++.       ...++.+++.+|.|||++|||||||||+|||++.+   .+||+|||+++.....   ..
T Consensus       163 ~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~~~~---~~  236 (681)
T 2pzi_A          163 MEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSF---GY  236 (681)
T ss_dssp             EECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS---CEEECCCTTCEETTCC---SC
T ss_pred             EEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC---cEEEEecccchhcccC---Cc
Confidence            677765 7877653       23357889999999999999999999999999864   4999999999754332   45


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLS  152 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  152 (265)
                      ..||+.|+|||++.+..  +.++|||||||++|+|++|..||.+......            .........++.+.+||.
T Consensus       237 ~~gt~~y~aPE~~~~~~--~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------~~~~~~~~~~~~l~~li~  302 (681)
T 2pzi_A          237 LYGTPGFQAPEIVRTGP--TVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------PEDDPVLKTYDSYGRLLR  302 (681)
T ss_dssp             CCCCTTTSCTTHHHHCS--CHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------CTTCHHHHHCHHHHHHHH
T ss_pred             cCCCccccCHHHHcCCC--CCceehhhhHHHHHHHHhCCCCCcccccccc------------cccccccccCHHHHHHHh
Confidence            67999999999987643  5669999999999999999988865321100            000000123578999999


Q ss_pred             HhcccCCCCCCCHHHHhcCccc
Q 024572          153 RIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       153 ~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      +||..||.+||+..+.+.|+|+
T Consensus       303 ~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          303 RAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHTCSSGGGSCSSHHHHHHHHH
T ss_pred             hhccCChhhCCCHHHHHHHHHH
Confidence            9999999999999999998886

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=5.2e-26  Score=190.36  Aligned_cols=140  Identities=11%  Similarity=0.028  Sum_probs=102.7

Q ss_pred             Cccccc-chHHHHHHhc-------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||++.+ +|.+++....       ++.+++.+|.|||++||+||||||+|||++.++.  +||+++|.            
T Consensus       110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~--~kl~~~~~------------  175 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD--VVLAYPAT------------  175 (286)
T ss_dssp             EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC--EEECSCCC------------
T ss_pred             EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC--EEEEeccc------------
Confidence            788864 9999874322       4678899999999999999999999999998776  89885542            


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccC--CCCCCCCHHHHHH
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKI--PDYVHISQDCRNL  150 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l  150 (265)
                             ++|        .+.++|||||||++|+|++|+.||.+......+...... .......  .....+++.+.+|
T Consensus       176 -------~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l  239 (286)
T 3uqc_A          176 -------MPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD-TAGQPIEPADIDRDIPFQISAV  239 (286)
T ss_dssp             -------CTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBC-TTSCBCCHHHHCTTSCHHHHHH
T ss_pred             -------cCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHH-hccCCCChhhcccCCCHHHHHH
Confidence                   222        246699999999999999999999876542211000000 0000000  0123588999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcC
Q 024572          151 LSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h  171 (265)
                      |.+||..||.+| |+.++++.
T Consensus       240 i~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          240 AARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHHcccCCccC-CHHHHHHH
Confidence            999999999999 99999863

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.88  E-value=1.3e-24  Score=197.85  Aligned_cols=106  Identities=15%  Similarity=0.099  Sum_probs=74.7

Q ss_pred             Cccccc-chHHHHHHhc------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-CCCC
Q 024572            1 MQLGVS-SLSEFVMLEG------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-RPKS   72 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~~~~   72 (265)
                      |||+.+ +|.+.+...+      ++.||+.+|.|+|++|||||||||+|||++.++.  +||+|||+|+...... ...+
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~--vKL~DFGlAr~~~~~~~~~~t  398 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQH--ARLIDFGSIVTTPQDCSWPTN  398 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSC--EEECCCTTEESCC---CCSHH
T ss_pred             EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCC--EEEeecccCeeCCCCCccccC
Confidence            899988 9999998766      4788999999999999999999999999988776  9999999998654332 2344


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhC
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG  110 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g  110 (265)
                      .+||+.|+|||++.+..  ..++|+||+|++++.+.++
T Consensus       399 ~vGTp~YmAPE~l~g~~--~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          399 LVQSFFVFVNELFAENK--SWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             HHHHHHHHHHHHC-------------------CCCCTT
T ss_pred             ceechhhccHHHhCCCC--CCcccccccccchhhhccc
Confidence            57999999999998753  2348999999998877554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.67  E-value=1.4e-18  Score=157.19  Aligned_cols=110  Identities=21%  Similarity=0.197  Sum_probs=88.5

Q ss_pred             Ccccc-cchHHHHHH-hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC--------C
Q 024572            1 MQLGV-SSLSEFVML-EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR--------P   70 (265)
Q Consensus         1 me~~~-~sL~~~~~~-~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~--------~   70 (265)
                      ||++. ++|.+++.. ..++.+++.++.|||++||+||||||+|||++.    .+||+|||+++.......        .
T Consensus       418 mE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~~~~~~~~~~  493 (540)
T 3en9_A          418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDEDKAVDLIVFK  493 (540)
T ss_dssp             EECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC----eEEEEECccCEECCCccccccchhhhh
Confidence            78996 699999875 345788999999999999999999999999987    499999999986543211        1


Q ss_pred             CCCcCCCCCcccccccC--CcCCCchHhHHHHHHHHHHHHhCCCCCC
Q 024572           71 KSTVGTPAYIAPEVLSR--REYDGKLADVWSCGVTLYVMLVGAYPFE  115 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~ll~g~~pf~  115 (265)
                      ....||+.|+|||++..  ..|. ..+|+|+..+-..+.+.++.+|.
T Consensus       494 ~~~~GT~~y~APEv~~~~~~~Y~-~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          494 KAVLSTHHEKFDEIWERFLEGYK-SVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHH-HHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHhccccC
Confidence            24569999999999976  4453 34799999999888887776663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.41  E-value=2.1e-14  Score=119.56  Aligned_cols=70  Identities=24%  Similarity=0.171  Sum_probs=56.3

Q ss_pred             Cccccc-chHHHHH---HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCC
Q 024572            1 MQLGVS-SLSEFVM---LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGT   76 (265)
Q Consensus         1 me~~~~-sL~~~~~---~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~   76 (265)
                      ||++.+ +|.+ +.   ...++.+++.++.|||++||+||||||+|||++ ++  .+||+|||+|+.            +
T Consensus       179 mE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~--~vkl~DFG~a~~------------~  242 (282)
T 1zar_A          179 MELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE--GIWIIDFPQSVE------------V  242 (282)
T ss_dssp             EECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT--EEEECCCTTCEE------------T
T ss_pred             EEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC--cEEEEECCCCeE------------C
Confidence            788865 8888 32   123577889999999999999999999999999 55  499999998862            3


Q ss_pred             CCCccccccc
Q 024572           77 PAYIAPEVLS   86 (265)
Q Consensus        77 ~~y~aPE~~~   86 (265)
                      ..++|||.+.
T Consensus       243 ~~~~a~e~l~  252 (282)
T 1zar_A          243 GEEGWREILE  252 (282)
T ss_dssp             TSTTHHHHHH
T ss_pred             CCCCHHHHHH
Confidence            4568898874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.23  E-value=4e-12  Score=104.31  Aligned_cols=59  Identities=19%  Similarity=0.170  Sum_probs=48.8

Q ss_pred             Cccccc------chHHHHHH------hccccchHHHHHhhh-hcCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS------SLSEFVML------EGSVKMKPDIFFSSL-SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~------sL~~~~~~------~~~~~~i~~~l~~lH-~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      ||+++.      +|.++...      ..++.+++.++.||| ++||+||||||.|||++.    .++|+|||+|..
T Consensus       147 mE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~----~~~liDFG~a~~  218 (258)
T 1zth_A          147 MEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID----KVYFIDMGQAVT  218 (258)
T ss_dssp             EECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS----SEEECCCTTCEE
T ss_pred             EEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC----cEEEEECccccc
Confidence            788853      77776543      345778899999999 999999999999999986    399999999863

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.78  E-value=1.2e-09  Score=94.12  Aligned_cols=62  Identities=13%  Similarity=0.058  Sum_probs=47.1

Q ss_pred             Cccccc-chHHHHH---HhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCC--------cEEEeccCCcc
Q 024572            1 MQLGVS-SLSEFVM---LEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAP--------RLKICDFGYSK   62 (265)
Q Consensus         1 me~~~~-sL~~~~~---~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~--------~vkl~Dfg~a~   62 (265)
                      |||+++ +|.++..   ...+..+++.++.+||++|||||||||.|||++.++.+        .+.|+||+-+.
T Consensus       190 ME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          190 MSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             EECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             EEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            778776 5554432   12346788999999999999999999999999766532        27899998654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.71  E-value=5.5e-06  Score=69.03  Aligned_cols=81  Identities=20%  Similarity=0.198  Sum_probs=47.5

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcCCCCCccc----------------ccccCCcCCCch
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAP----------------EVLSRREYDGKL   94 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aP----------------E~~~~~~~~~~~   94 (265)
                      ..++|+|++|.||+++.+....+.|+||+.+.................-..|                +......   ..
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~---~~  267 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYR---MK  267 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHH---HH
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHH---HH
Confidence            4689999999999998741223789999987532211000000000000122                2221111   11


Q ss_pred             HhHHHHHHHHHHHHhCCCCC
Q 024572           95 ADVWSCGVTLYVMLVGAYPF  114 (265)
Q Consensus        95 ~DiwslG~~l~~ll~g~~pf  114 (265)
                      .+.|++|.++|.+.+|..+|
T Consensus       268 ~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          268 EKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHH
Confidence            58999999999999997765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.69  E-value=8.8e-06  Score=66.11  Aligned_cols=30  Identities=23%  Similarity=0.264  Sum_probs=24.0

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|++|.||+++....  +.|+||+.+.
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~--~~lIDwe~a~  212 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKV--SGFIDLGRSG  212 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEE--EEECCCTTCE
T ss_pred             ceEECCCCCcCcEEEECCcE--EEEEEchhcc
Confidence            56999999999999975432  5699998653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.64  E-value=8.8e-06  Score=65.73  Aligned_cols=29  Identities=21%  Similarity=0.239  Sum_probs=23.7

Q ss_pred             CceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           32 QICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        32 ~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +++|+|++|.||+++.+..  +.|+||+.+.
T Consensus       185 ~l~HgDl~~~Nil~~~~~~--~~liD~~~a~  213 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGRF--SGFIDCGRLG  213 (264)
T ss_dssp             EEECSSCCGGGEEEETTEE--EEECCCTTCE
T ss_pred             EEECCCCCCCcEEEECCcE--EEEEcchhcc
Confidence            3999999999999976532  5699999764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.45  E-value=5.3e-05  Score=64.54  Aligned_cols=32  Identities=25%  Similarity=0.447  Sum_probs=26.2

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .+++|||++|.||+++.++...+.|+||+.+.
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence            57999999999999986643235899999875

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.05  E-value=0.0038  Score=52.20  Aligned_cols=31  Identities=29%  Similarity=0.486  Sum_probs=25.9

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+++.||+++.++.  +.|+||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~--~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQ--IWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGC--EEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCc--EEEEehhhcc
Confidence            478999999999999975544  8999998653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.88  E-value=0.15  Score=39.91  Aligned_cols=125  Identities=14%  Similarity=0.067  Sum_probs=69.1

Q ss_pred             chHHHHHHhcc----------ccchHHHHHhh-hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCCcC
Q 024572            7 SLSEFVMLEGS----------VKMKPDIFFSS-LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVG   75 (265)
Q Consensus         7 sL~~~~~~~~~----------~~~i~~~l~~l-H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~   75 (265)
                      ||.+.+..++.          +.|....|.-+ ..+.-..+=+.|..|++..+|.  |.+.+ +.+           ...
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~--V~f~~-~~s-----------~~~   99 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA--VTLAP-AAD-----------DAG   99 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC--EEECC-C----------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc--eeccc-ccc-----------ccc
Confidence            67777776653          33333333322 1112123445578999988876  65543 111           012


Q ss_pred             CCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhc
Q 024572           76 TPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIF  155 (265)
Q Consensus        76 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  155 (265)
                      ...+.|||...  ...+.+.-|||||+++|..+--..|-                       .....+|+.+..||..|.
T Consensus       100 ~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~e-----------------------~eE~eLS~~LE~LL~~Mt  154 (229)
T 2yle_A          100 EPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLKE-----------------------NEERELSPPLEQLIDHMA  154 (229)
T ss_dssp             -------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCCT-----------------------TEEECCCHHHHHHHHHHT
T ss_pred             ccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCCc-----------------------ccchhhCHHHHHHHHHHH
Confidence            33567888764  22234578999999999988533221                       111257889999998887


Q ss_pred             cc-------------------------CCCCCCCHHHHhc
Q 024572          156 VA-------------------------NPSRRITIKEIKS  170 (265)
Q Consensus       156 ~~-------------------------dP~~R~s~~ell~  170 (265)
                      .-                         .+..|.++.+|++
T Consensus       155 ~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~  194 (229)
T 2yle_A          155 NTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK  194 (229)
T ss_dssp             TCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred             hcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence            55                         2467788888875

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.19  E-value=0.0099  Score=51.56  Aligned_cols=31  Identities=19%  Similarity=0.292  Sum_probs=27.1

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...++|||++|.||+++.++   ++|+||+.+.
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~---~~lID~e~a~  260 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS---TQVIDPEFSF  260 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC---EEECCCTTCE
T ss_pred             CCCeEEecCCCCCcEEEeCCC---CEEEeCcccc
Confidence            578899999999999997653   8999999775

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.26  E-value=0.014  Score=48.42  Aligned_cols=31  Identities=23%  Similarity=0.344  Sum_probs=24.8

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+++.||+++.+..  +.|+||+.+.
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~--~~lIDf~~a~  216 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDEL--SGLIDFYFAC  216 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEE--EEECCCTTCE
T ss_pred             CcccCCCCCCccCEEEeCCce--EEEecchhcc
Confidence            357999999999999986532  4799998653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.96  E-value=0.024  Score=45.71  Aligned_cols=29  Identities=24%  Similarity=0.420  Sum_probs=23.6

Q ss_pred             CceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           32 QICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        32 ~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .++|+|+.+.||+++..+.  +-|+||+.+.
T Consensus       194 ~l~HGDl~~~Nil~~~~~~--~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKL--IGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTSEEEETTEE--EEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEECCeE--EEEEECcccc
Confidence            4899999999999986542  5699998664

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.57  E-value=0.027  Score=46.96  Aligned_cols=34  Identities=26%  Similarity=0.308  Sum_probs=26.8

Q ss_pred             hhcCceecCCCcCcEEEcCCC--CCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSP--APRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~--~~~vkl~Dfg~a~   62 (265)
                      +...++|||+.+.||+++.+.  ...+.|+||+.+.
T Consensus       181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            356899999999999997631  1248999999775

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=93.38  E-value=0.033  Score=46.06  Aligned_cols=33  Identities=24%  Similarity=0.338  Sum_probs=25.7

Q ss_pred             hhcCceecCCCcCcEEEcC---CCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDG---SPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~---~~~~~vkl~Dfg~a~   62 (265)
                      ....++|+|++|.||+++.   ++. .+.|+||+.+.
T Consensus       188 ~~~~~~HgD~~~~N~l~~~~~~~~~-~~~~iD~~~a~  223 (306)
T 3tdw_A          188 YTPRLIHGDLSPDHFLTNLNSRQTP-LTGIIDFGDAA  223 (306)
T ss_dssp             CCCEEECSCCSGGGEEECTTCSSCC-EEEECCCTTCE
T ss_pred             CCCeeEeCCCCcccEEEecCCCCCc-eEEEEehhhcC
Confidence            4457899999999999986   222 24799999775

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.20  E-value=0.024  Score=47.82  Aligned_cols=31  Identities=13%  Similarity=0.193  Sum_probs=25.0

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ...++|+|++|.||++++..  .+.|+||+.+.
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~--~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQ--PVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTE--EEEECCGGGCE
T ss_pred             CceEEeCCCCCCeEEEeCCc--EEEEEcccccc
Confidence            46899999999999998432  26899998764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=92.74  E-value=0.052  Score=46.49  Aligned_cols=31  Identities=16%  Similarity=0.234  Sum_probs=25.7

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      +...++|||+.|.||+++.++   ++|+||..+.
T Consensus       225 ~~~~L~HGDl~~~Nil~~~~~---~~lID~e~a~  255 (397)
T 2olc_A          225 SAETLIHGDLHTGSIFASEHE---TKVIDPEFAF  255 (397)
T ss_dssp             BCCEEECSCCSGGGEEECSSC---EEECCCTTCE
T ss_pred             CCCceeeCCCCcCcEEEeCCC---eEEEeCcccc
Confidence            357899999999999997643   8999997654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=92.72  E-value=0.046  Score=45.35  Aligned_cols=30  Identities=17%  Similarity=0.159  Sum_probs=24.9

Q ss_pred             hhcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           29 LSQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        29 H~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ....++|||+++.||+++ +   .+.|+||+.+.
T Consensus       193 ~~~~l~HgD~~~~Nil~~-~---~~~lIDfe~a~  222 (328)
T 1zyl_A          193 FTVLRLHGDCHAGNILWR-D---GPMFVDLDDAR  222 (328)
T ss_dssp             SCCEECCSSCSGGGEEES-S---SEEECCCTTCC
T ss_pred             CCeeeeeCCCCcccEeEc-C---CCEEEECCCCC
Confidence            346789999999999998 3   38999998664

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=92.51  E-value=0.056  Score=45.83  Aligned_cols=29  Identities=34%  Similarity=0.602  Sum_probs=24.0

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      .+++|+|+++.|||++.+.   +.|+||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~~~---~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC---LRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C---EEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecCCc---EEEEEecCCC
Confidence            5699999999999997543   8999998764

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=91.42  E-value=0.078  Score=44.52  Aligned_cols=31  Identities=23%  Similarity=0.456  Sum_probs=26.1

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..+++|+|+.+.||+++.++.  +.|+||+.+.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~--~~~iD~e~~~  235 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEES--IYIIDWDEPM  235 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGC--EEECCCSSCE
T ss_pred             CceeEeCCCCcCCEEEeCCCe--EEEEECCCCe
Confidence            457999999999999986544  8999998765

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=90.47  E-value=0.12  Score=45.02  Aligned_cols=19  Identities=37%  Similarity=0.611  Sum_probs=15.8

Q ss_pred             hcCceecCCCcCcEEEcCC
Q 024572           30 SQQICHRDLKLENTLLDGS   48 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~   48 (265)
                      ...++|+|+.+.|||++.+
T Consensus       248 ~~v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          248 PVTFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             CEEEECSCCCGGGEEEEC-
T ss_pred             CeEEEeCCCCCCeEEeeCC
Confidence            3469999999999999864

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=89.97  E-value=0.16  Score=41.54  Aligned_cols=29  Identities=34%  Similarity=0.412  Sum_probs=23.3

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|+.+.||+.+ ++.  +.|+||..+.
T Consensus       173 ~~l~HgDl~~~Nil~~-~~~--~~lID~e~a~  201 (301)
T 3dxq_A          173 LAACHCDPLCENFLDT-GER--MWIVDWEYSG  201 (301)
T ss_dssp             CEEECSCCCGGGEEEC-SSC--EEECCCTTCE
T ss_pred             ceeeccCCCcCCEEEC-CCC--EEEEeccccc
Confidence            4589999999999943 333  8999998764

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=89.74  E-value=0.19  Score=44.10  Aligned_cols=16  Identities=31%  Similarity=0.468  Sum_probs=14.8

Q ss_pred             cCceecCCCcCcEEEc
Q 024572           31 QQICHRDLKLENTLLD   46 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~   46 (265)
                      ..++|+|+.+.|||++
T Consensus       290 ~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          290 IVLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEEECSCCCGGGEEEC
T ss_pred             eeEEecCCCCCcEEee
Confidence            4699999999999997

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=89.52  E-value=0.21  Score=42.70  Aligned_cols=33  Identities=36%  Similarity=0.570  Sum_probs=25.7

Q ss_pred             hcCceecCCCcCcEEEcCC--CCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGS--PAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~--~~~~vkl~Dfg~a~   62 (265)
                      ...++|+|+.+.||+++.+  ..+.+.|+||..+.
T Consensus       219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            3569999999999999865  11249999998764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=86.01  E-value=0.45  Score=40.84  Aligned_cols=31  Identities=39%  Similarity=0.580  Sum_probs=23.7

Q ss_pred             CceecCCCcCcEEEcC----CCCCcEEEeccCCcc
Q 024572           32 QICHRDLKLENTLLDG----SPAPRLKICDFGYSK   62 (265)
Q Consensus        32 ~ivH~dlkp~NIll~~----~~~~~vkl~Dfg~a~   62 (265)
                      .++|+|+.+.|||+..    +....++++||.+|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            3679999999999943    122359999998764

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=83.18  E-value=0.63  Score=40.33  Aligned_cols=29  Identities=28%  Similarity=0.504  Sum_probs=23.8

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|+.+.||+ +..+.  +.|+||..|.
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~--~~~IDwe~a~  290 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNN--IRMIDYEYSA  290 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSC--EEECCCTTCE
T ss_pred             ceEECCCCCcccee-cCCCc--EEEEecccCC
Confidence            56999999999999 44443  9999998764

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=81.44  E-value=0.62  Score=37.73  Aligned_cols=25  Identities=24%  Similarity=0.129  Sum_probs=20.4

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEecc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDF   58 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Df   58 (265)
                      ..+||+|+.+.||+++.++   ..++|-
T Consensus       188 p~LvHGDlw~gNvl~~~~g---~~~iDp  212 (288)
T 3f7w_A          188 PARIHGDLWNGNVLWQDDG---AVVIDP  212 (288)
T ss_dssp             CEEECSCCSGGGEEEETTE---EEECSC
T ss_pred             CeeeecCCCCCcEEEcCCC---eEEEec
Confidence            4799999999999998776   456663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	265
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-43
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-43
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-41
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-38
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-37
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-37
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-37
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-37
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-36
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-36
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-35
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-35
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-35
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-35
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-34
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-34
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-33
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-33
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-31
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-31
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-31
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-30
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-30
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-29
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-28
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-28
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-28
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-27
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-27
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-27
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-27
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-26
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-26
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-26
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	8e-26
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-25
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-25
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-24
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-24
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-24
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-24
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-23
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-23
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-23
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-23
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-23
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-22
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-22
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-22
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-22
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-22
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-21
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-21
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-19
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-19
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-18
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.001

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 2e-43
 Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 10/148 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+++ HRD+K EN LL  +    LKI DFG+S      SR  +  GT  Y+ PE++  R 
Sbjct: 124 SKRVIHRDIKPENLLLGSAG--ELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRM 180

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +D K  D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD   +++  R+
Sbjct: 181 HDEK-VDLWSLGVLCYEFLVGKPPFEA----NTYQETYKRISRVEFTFPD--FVTEGARD 233

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN 177
           L+SR+   NPS+R  ++E+  HPW   N
Sbjct: 234 LISRLLKHNPSQRPMLREVLEHPWITAN 261

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (365), Expect = 9e-43
 Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 8/154 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST---VGTPAYIAPEVLS 86
              I HRD+K EN LLD      LKI DFG +     ++R +      GT  Y+APE+L 
Sbjct: 121 GIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
           RRE+  +  DVWSCG+ L  ML G  P+   + P +  +  S     +  +  +  I   
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEKKTYLNPWKKIDSA 235

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
              LL +I V NPS RITI +IK   W+ K L +
Sbjct: 236 PLALLHKILVENPSARITIPDIKKDRWYNKPLKK 269

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 2e-41
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 11/200 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I H D++ EN +     +  +KI +FG ++        +     P Y APEV     
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDC 147
                 D+WS G  +YV+L G  PF      +  ++ I  IM  +Y   +  +  IS + 
Sbjct: 180 VSTA-TDMWSLGTLVYVLLSGINPFLA----ETNQQIIENIMNAEYTFDEEAFKEISIEA 234

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEIT 207
            + + R+ V     R+T  E   HPW  + + R  T+  + + +R+   T      +++ 
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLIK---KDLN 291

Query: 208 KIVEEAKV-PPPVSRSIGGF 226
            +V  A++      RS  G 
Sbjct: 292 MVVSAARISCGGAIRSQKGV 311

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 8e-38
 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 7/150 (4%)

Query: 25  FFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEV 84
           F  + +  I HRDLK +N  + G P   +KI D G +      S  K+ +GTP ++APE+
Sbjct: 127 FLHTRTPPIIHRDLKCDNIFITG-PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEM 184

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
               +YD    DV++ G+ +  M    YP+ + ++     +   R+ +            
Sbjct: 185 Y-EEKYDES-VDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAI 239

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
            + + ++      N   R +IK++ +H +F
Sbjct: 240 PEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  132 bits (334), Expect = 2e-37
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 10/175 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              I H D+K EN + +   A  +KI DFG +         K T  T  + APE++ R  
Sbjct: 145 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREP 204

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDC 147
                 D+W+ GV  YV+L G  PF  ++D     +T+  +    ++  +  +  +S + 
Sbjct: 205 VG-FYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVKRCDWEFDEDAFSSVSPEA 259

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWF---LKNLPRELTETAQAIYYRKENPTFS 199
           ++ +  +    P +R+T+ +   HPW      NL   +  +      +K    ++
Sbjct: 260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYA 314

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  132 bits (333), Expect = 3e-37
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
                H DLK EN +     +  LK+ DFG +         K T GT  + APEV   + 
Sbjct: 142 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 201

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQDC 147
                 D+WS GV  Y++L G  PF      +N  +T+  + +  + + D  +  IS+D 
Sbjct: 202 VGYY-TDMWSVGVLSYILLSGLSPFGG----ENDDETLRNVKSCDWNMDDSAFSGISEDG 256

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLK-NLPRELTETAQAIY--YRKENPTFSLQSVE 204
           ++ + ++ +A+P+ R+TI +   HPW    N P   ++   + Y   R    T      E
Sbjct: 257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPE 316

Query: 205 EITKIVEEAKVPP 217
            +  +   +    
Sbjct: 317 PLPPLGRISNYSS 329

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 6e-37
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 5/189 (2%)

Query: 30  SQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S  I HRD+K EN L     P   LK+ DFG++K +  H+   +   TP Y+APEVL   
Sbjct: 129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 188

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQD 146
           +YD    D+WS GV +Y++L G  PF             +RI   QY+ P+  +  +S++
Sbjct: 189 KYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 247

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFSLQSVEEI 206
            + L+  +    P++R+TI E  +HPW +++     T    +   +++   +     EE+
Sbjct: 248 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE-DVKEEM 306

Query: 207 TKIVEEAKV 215
           T  +   +V
Sbjct: 307 TSALATMRV 315

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  129 bits (325), Expect = 7e-37
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 9/150 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              I HRDLK EN LLD      +K+ DFG+S       + +   GTP+Y+APE++    
Sbjct: 128 KLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 185

Query: 90  YD-----GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
            D     GK  D+WS GV +Y +L G+ PF  ++     R  +S     Q+  P++   S
Sbjct: 186 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGSPEWDDYS 243

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
              ++L+SR  V  P +R T +E  +HP+F
Sbjct: 244 DTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 5e-36
 Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 9/149 (6%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
           S QI H DLK EN +L     P PR+KI DFG +      +  K+  GTP ++APE+++ 
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ 145
                  AD+WS GV  Y++L GA PF         ++T++ + AV Y+  D  + + S 
Sbjct: 191 EPLG-LEADMWSIGVITYILLSGASPFLG----DTKQETLANVSAVNYEFEDEYFSNTSA 245

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWF 174
             ++ + R+ V +P +R+TI++   HPW 
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 6e-36
 Identities = 52/156 (33%), Positives = 74/156 (47%), Gaps = 15/156 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           +  + HRD+K EN L+D +    LK+ DFG     L  +      GT  Y  PE +    
Sbjct: 128 NCGVLHRDIKDENILIDLNR-GELKLIDFGSGAL-LKDTVYTDFDGTRVYSPPEWIRYHR 185

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y G+ A VWS G+ LY M+ G  PFE  E+          I+  Q        +S +C++
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSECQH 233

Query: 150 LLSRIFVANPSRRITIKEIKSHPWFLKN-LPRELTE 184
           L+       PS R T +EI++HPW     LP+E  E
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 2e-35
 Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 9/145 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
              + HRDLK  N  LDG     +K+ DFG ++  +   S  K+ VGTP Y++PE ++R 
Sbjct: 132 GHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 189

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y+ K +D+WS G  LY +     PF       + ++   +I   +++   Y   S +  
Sbjct: 190 SYNEK-SDIWSLGCLLYELCALMPPFTA----FSQKELAGKIREGKFRRIPY-RYSDELN 243

Query: 149 NLLSRIFVANPSRRITIKEIKSHPW 173
            +++R+       R +++EI  +P 
Sbjct: 244 EIITRMLNLKDYHRPSVEEILENPL 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 2e-35
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 7/151 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S Q+ HRD+K +N LL       +K+ DFG+          +ST VGTP ++APEV++R+
Sbjct: 134 SNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  K  D+WS G+    M+ G  P+ ++   +              ++ +   +S   R
Sbjct: 192 AYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFR 247

Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
           + L+R    +  +R + KE+  H +     P
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 4e-35
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLS 86
            + I HRDLK EN LL+      ++I DFG +K     S   R  S VGT  Y++PE+L+
Sbjct: 126 GKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 183

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
            +      +D+W+ G  +Y ++ G  PF       N      +I+ ++Y  P+       
Sbjct: 184 EKSACKS-SDLWALGCIIYQLVAGLPPFRA----GNEYLIFQKIIKLEYDFPE--KFFPK 236

Query: 147 CRNLLSRIFVANPSRRITIKE------IKSHPWF 174
            R+L+ ++ V + ++R+  +E      +K+HP+F
Sbjct: 237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 6e-35
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 10/160 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
             +I HRDLK  N L        +K+ DFG S   +    R  S +GTP ++APEV+   
Sbjct: 128 DNKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 185

Query: 89  EYDGKL----ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
               +     ADVWS G+TL  M     P  +    +   K      +    +      S
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRWS 242

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE 184
            + ++ L +    N   R T  ++  HP+   +  + + E
Sbjct: 243 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRE 282

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  124 bits (311), Expect = 2e-34
 Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 16/150 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S+ I +RDLK EN LLD +    +KI DFG++K   +     +  GTP YIAPEV+S + 
Sbjct: 122 SKDIIYRDLKPENILLDKNG--HIKITDFGFAKY--VPDVTYTLCGTPDYIAPEVVSTKP 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+    D WS G+ +Y ML G  PF D     N  KT  +I+  + + P     ++D ++
Sbjct: 178 YNKS-IDWWSFGILIYEMLAGYTPFYD----SNTMKTYEKILNAELRFPP--FFNEDVKD 230

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWF 174
           LLSR+   + S+R+       +++K+HPWF
Sbjct: 231 LLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (308), Expect = 5e-34
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 13/155 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVL---S 86
           S  + HRD+K  N LL       +K+ DFG +    + +   S VGTP ++APEV+    
Sbjct: 133 SHNMIHRDVKAGNILLSEPG--LVKLGDFGSAS---IMAPANSFVGTPYWMAPEVILAMD 187

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
             +YDGK  DVWS G+T   +     P  +     N    +  I   +       H S+ 
Sbjct: 188 EGQYDGK-VDVWSLGITCIELAERKPPLFN----MNAMSALYHIAQNESPALQSGHWSEY 242

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
            RN +       P  R T + +  H + L+  P  
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (306), Expect = 1e-33
 Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 30  SQQICHRDLKLENTLLDGSPAP-RLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK EN L        ++ I DFG SK     S   +  GTP Y+APEVL+++
Sbjct: 125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 184

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y     D WS GV  Y++L G  PF D+ D K F + +      ++  P +  IS   +
Sbjct: 185 PYSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE--YEFDSPYWDDISDSAK 241

Query: 149 NLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
           + +  +   +P +R T ++   HPW   +   +
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 274

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 1e-33
 Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 42/185 (22%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREY 90
            +I HRD+K  N L++      +K+CDFG S   L+ S   S VGT +Y++PE L    Y
Sbjct: 124 HKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQ-LIDSMANSFVGTRSYMSPERLQGTHY 180

Query: 91  DGKLADVWSCGVTLYVMLVGAYPFE----------------------------------- 115
             + +D+WS G++L  M VG YP                                     
Sbjct: 181 SVQ-SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239

Query: 116 ---DQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHP 172
              D   P    + +  I+            S + ++ +++  + NP+ R  +K++  H 
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299

Query: 173 WFLKN 177
           +  ++
Sbjct: 300 FIKRS 304

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 4e-31
 Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 25/172 (14%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S ++ HRDLK +N L+  S   ++K+ DFG ++         S V T  Y APEVL +  
Sbjct: 134 SHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 191

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI-MAVQYKIPDYV------- 141
           Y     D+WS G     M      F    D     K +  I +  +   P  V       
Sbjct: 192 YATP-VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 250

Query: 142 -------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR 180
                         I +  ++LL +    NP++RI+     SHP+F ++L R
Sbjct: 251 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF-QDLER 301

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  115 bits (289), Expect = 8e-31
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 11/150 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           ++ + +RDLK  N LLD      ++I D G +       +P ++VGT  Y+APEVL +  
Sbjct: 125 NRFVVYRDLKPANILLD--EHGHVRISDLGLACD-FSKKKPHASVGTHGYMAPEVLQKGV 181

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
                AD +S G  L+ +L G  PF  Q   K+  +     + +  ++PD    S + R+
Sbjct: 182 AYDSSADWFSLGCMLFKLLRGHSPF-RQHKTKDKHEIDRMTLTMAVELPD--SFSPELRS 238

Query: 150 LLSRIFVANPSRRIT-----IKEIKSHPWF 174
           LL  +   + +RR+       +E+K  P+F
Sbjct: 239 LLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 9e-31
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 11/147 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S+ I +RDLKL+N LLD      +KI DFG  K ++L     +T  GTP YIAPE+L  +
Sbjct: 121 SKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ 178

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y+    D WS GV LY ML+G  PF      ++  +    I       P    + ++ +
Sbjct: 179 KYNHS-VDWWSFGVLLYEMLIGQSPFHG----QDEEELFHSIRMDNPFYPR--WLEKEAK 231

Query: 149 NLLSRIFVANPSRRITIK-EIKSHPWF 174
           +LL ++FV  P +R+ ++ +I+ HP F
Sbjct: 232 DLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 3e-30
 Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 15/151 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRPKSTVGTPAYIAPEVLSRR 88
           S+ + +RD+KLEN +LD      +KI DFG  K  +   +  K+  GTP Y+APEVL   
Sbjct: 123 SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
           +Y     D W  GV +Y M+ G  PF +    ++  +    I+  + + P    +S + +
Sbjct: 181 DYGRA-VDWWGLGVVMYEMMCGRLPFYN----QDHERLFELILMEEIRFPR--TLSPEAK 233

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +LL+ +   +P +R+       KE+  H +F
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 5e-30
 Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 8/156 (5%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLSR 87
           + I HRDLK  N  L       +KI DFG +          + +   G+  ++APEV+  
Sbjct: 123 KSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180

Query: 88  REYD--GKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           ++ +     +DV++ G+ LY ++ G  P+ +  +       + R            +  +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFL-KNLPR 180
             + L++         R    +I +    L ++LP+
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 276

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 5e-29
 Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 27/177 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
           S ++ HRDLK +N L++      +K+ DFG +++  +  R  +  V T  Y APE+L   
Sbjct: 120 SHRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI-------SRIMAVQYKIPDYV 141
           +Y     D+WS G     M+     F    +     +           +      +PDY 
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237

Query: 142 ----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPREL 182
                            + +D R+LLS++   +P++RI+ K   +HP+F +++ + +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (269), Expect = 2e-28
 Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 26/173 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SLLHSRPKSTVGTPAYIAPEVLSRR 88
              I HRDLK  N LLD +    LK+ DFG +KS    +      V T  Y APE+L   
Sbjct: 118 QHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA 175

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRI-------MAVQYKIPDYV 141
              G   D+W+ G  L  +L+         D     +    +             +PDYV
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 142 ---------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
                              D  +L+  +F+ NP  RIT  +     +F  N P
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF-SNRP 287

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 2e-28
 Identities = 52/216 (24%), Positives = 83/216 (38%), Gaps = 30/216 (13%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  ICHRD+K +N LLD   A   K+CDFG +K  +      S + +  Y APE++    
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVL-KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM-------------AVQYK 136
                 DVWS G  L  +L+G   F          + I  +                ++K
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258

Query: 137 IPDY----------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETA 186
            P                 +   L SR+    P+ R+T  E  +H +F      EL +  
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-----DELRDPN 313

Query: 187 QAIYYRKENPTFSLQSVEEITKIVEEA-KVPPPVSR 221
             +   ++ P     + +E++     A  + PP +R
Sbjct: 314 VKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 3e-28
 Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 42/227 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPEVL 85
           S  + HRDLK  N LL+ +    LKICDFG ++               V T  Y APE++
Sbjct: 127 SANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 184

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD------ 139
              +   K  D+WS G  L  ML     F      K++   ++ I+ +            
Sbjct: 185 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG----KHYLDQLNHILGILGSPSQEDLNCI 240

Query: 140 -----------------------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 176
                                  + +      +LL ++   NP +RI +++  +HP+  +
Sbjct: 241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

Query: 177 NLPRELTETAQAIY-YRKENPTFSLQSVEEITKIVEEAKVPPPVSRS 222
                    A+A + +  E      + ++E+  I EE     P  RS
Sbjct: 301 YYDPSDEPIAEAPFKFDMELDDLPKEKLKEL--IFEETARFQPGYRS 345

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 3e-27
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 11/154 (7%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSRR 88
               HRDL+  N L+  +     K+ DFG ++      ++  +       + APE     
Sbjct: 132 MNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 189

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            +  K +DVWS G+ L  +             +     + R     Y++P      +   
Sbjct: 190 RFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----GYRMPCPPECPESLH 244

Query: 149 NLLSRIFVANPSRRITIKEIKS--HPWFLKNLPR 180
           +L+ + +   P  R T + +++    +F    P+
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 3e-27
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 27/174 (15%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS-TVGTPAYIAPEVLSRRE 89
           + + HRDLK +N L++ +    LK+ +FG +++  +  R  S  V T  Y  P+VL   +
Sbjct: 120 RNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIM--------AVQYKIPDYV 141
                 D+WS G     +     P     D  +  K I R++            K+PDY 
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237

Query: 142 ----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 179
                            ++   R+LL  +   NP +RI+ +E   HP+F    P
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (262), Expect = 4e-27
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 16/150 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  + +RDLK EN L+D      +++ DFG++K      R  +  GTP  +APE++  + 
Sbjct: 159 SLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILSKG 214

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y+    D W+ GV +Y M  G  PF          +   +I++ + + P   H S D ++
Sbjct: 215 YNKA-VDWWALGVLIYEMAAGYPPFFA----DQPIQIYEKIVSGKVRFPS--HFSSDLKD 267

Query: 150 LLSRIFVANPSRRI-----TIKEIKSHPWF 174
           LL  +   + ++R       + +IK+H WF
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 5e-27
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 42/189 (22%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTPAYIAPEV 84
             +I HRD+K  N L+       LK+ DFG ++      +   +R  + V T  Y  PE+
Sbjct: 135 RNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL 192

Query: 85  LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH-- 142
           L      G   D+W  G  +  M   +   +        +  ++ I  +   I   V   
Sbjct: 193 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG----NTEQHQLALISQLCGSITPEVWPN 248

Query: 143 ----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                                             +L+ ++ V +P++RI   +  +H +F
Sbjct: 249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308

Query: 175 LKN-LPREL 182
             + +P +L
Sbjct: 309 WSDPMPSDL 317

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 2e-26
 Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 8/151 (5%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
              I +RD+KLEN LLD +    L          +    R     GT  Y+AP+++   +
Sbjct: 147 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 206

Query: 90  Y-DGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
               K  D WS GV +Y +L GA PF    +  +  +   RI+  +   P    +S   +
Sbjct: 207 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ--EMSALAK 264

Query: 149 NLLSRIFVANPSRRI-----TIKEIKSHPWF 174
           +L+ R+ + +P +R+        EIK H +F
Sbjct: 265 DLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (252), Expect = 4e-26
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 26/169 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST-VGTPAYIAPEVLSRR 88
            +++ HRDLK +N L++      LKI DFG +++  +  R  +  + T  Y AP+VL   
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTI-------SRIMAVQYKIPDYV 141
           +      D+WS G     M+ G   F    +     +         S+      ++P Y 
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235

Query: 142 ----------------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                            + +   +LLS++   +P++RIT K+   H +F
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 7e-26
 Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 15/190 (7%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST---VGTPAYIAPEVLSR 87
           +++ HRDL   N L+       +KI DFG +K      +            ++A E +  
Sbjct: 130 RRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           R Y  + +DVWS GVT++ ++       D          + +      ++P     + D 
Sbjct: 188 RIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK----GERLPQPPICTIDV 242

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIYYRKENPTFS-----LQS 202
             ++ + ++ +   R   +E+      +   P+              +PT S     L  
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMD 302

Query: 203 VEEITKIVEE 212
            E++  +V+ 
Sbjct: 303 EEDMDDVVDA 312

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  101 bits (252), Expect = 8e-26
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 33/177 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRD+K  N ++D     +L++ D+G ++           V +  +  PE+L   +
Sbjct: 147 SMGIMHRDVKPHNVMID-HEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-------------- 135
                 D+WS G  L  M+    PF    D  +    I++++  +               
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265

Query: 136 ------------------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 174
                                +   +S +  + L ++   +   R+T +E   HP+F
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-25
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
            +Q  HRDL   N L+  +     KI DFG S+   ++ +         ++A E L+   
Sbjct: 145 QKQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 202

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           Y    +DVWS GV L+ ++                + + +     Y++   ++   +  +
Sbjct: 203 YTTN-SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----GYRLEKPLNCDDEVYD 257

Query: 150 LLSRIFVANPSRRITIKEIKSH 171
           L+ + +   P  R +  +I   
Sbjct: 258 LMRQCWREKPYERPSFAQILVS 279

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 2e-25
 Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 9/142 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
                HRDL   N L+        K+ DFG +K     S   +      + APE L  ++
Sbjct: 121 GNNFVHRDLAARNVLVSEDN--VAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALREKK 176

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN 149
           +  K +DVWS G+ L+ +         +   K+    + +    +   PD          
Sbjct: 177 FSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK--GYKMDAPD--GCPPAVYE 231

Query: 150 LLSRIFVANPSRRITIKEIKSH 171
           ++   +  + + R +  +++  
Sbjct: 232 VMKNCWHLDAAMRPSFLQLREQ 253

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.5 bits (242), Expect = 2e-24
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 12/146 (8%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSLLHSRPKSTVGTPAYIAPEVL 85
           ++  HRDL   N +LD      +K+ DFG ++                     ++A E L
Sbjct: 149 KKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
             +++  K +DVWS GV L+ ++    P     +  +    + +      ++    +   
Sbjct: 207 QTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ----GRRLLQPEYCPD 261

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSH 171
               ++ + +      R +  E+ S 
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 96.4 bits (239), Expect = 2e-24
 Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 6/143 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFG--YSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
              I HRD+K  N ++  + A ++         + S    ++  + +GT  Y++PE    
Sbjct: 129 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 188

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
              D + +DV+S G  LY +L G  PF          + +           +   +S D 
Sbjct: 189 DSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE--GLSADL 245

Query: 148 RNLLSRIFVANPSRRI-TIKEIK 169
             ++ +    NP  R  T  E++
Sbjct: 246 DAVVLKALAKNPENRYQTAAEMR 268

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 3e-24
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 11/146 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            +   HRDL   N L+       +KICDFG ++   S   +    +      ++APE L 
Sbjct: 182 FKSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 239

Query: 87  RREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
              Y  K +DVWS G+ L+ +  +G  P+       NF K    ++   +K+    + ++
Sbjct: 240 EGIYTIK-SDVWSYGILLWEIFSLGVNPYPGIPVDANFYK----LIQNGFKMDQPFYATE 294

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSH 171
           +   ++   +  +  +R +   + S 
Sbjct: 295 EIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.5 bits (239), Expect = 6e-24
 Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 33/216 (15%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N  ++      LKI DFG ++           V T  Y APE++    
Sbjct: 139 SADIIHRDLKPSNLAVN--EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWM 194

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD---------- 139
           +  +  D+WS G  +  +L G   F   +     +  +  +     ++            
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254

Query: 140 ---------------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE 184
                          ++  +    +LL ++ V +  +RIT  +  +H +F +    +   
Sbjct: 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP 314

Query: 185 TAQAIYYRKENPTFSLQSVEEITKIVEEAK--VPPP 218
            A       E+    +   + +    +E    VPPP
Sbjct: 315 VADPYDQSFESRDLLIDEWKSL--TYDEVISFVPPP 348

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 1e-23
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 12/147 (8%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPEVL 85
           S++  HRDL   N LL       +KI DFG  +    +   +   +      A+ APE L
Sbjct: 129 SKRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186

Query: 86  SRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS 144
             R +    +D W  GVTL+ M   G  P+       N  + + +I     ++P      
Sbjct: 187 KTRTFSHA-SDTWMFGVTLWEMFTYGQEPWIG----LNGSQILHKIDKEGERLPRPEDCP 241

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKSH 171
           QD  N++ + +   P  R T   ++  
Sbjct: 242 QDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.7 bits (237), Expect = 1e-23
 Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 39/210 (18%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           +  I HRDLK  N  ++      LKI DFG ++     S     V T  Y APEV+    
Sbjct: 139 AAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQ--ADSEMTGYVVTRWYRAPEVILNWM 194

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQED--------------PKNFRKTISRIMAVQY 135
              +  D+WS G  +  M+ G   F+  +               P  F + +    A  Y
Sbjct: 195 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 254

Query: 136 K--IPDYV---------HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTE 184
              +P+           + S    NLL ++ V +  +R+T  E  +HP+F       L +
Sbjct: 255 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF-----ESLHD 309

Query: 185 TAQAIYYRKENPTFSLQSVEEITKIVEEAK 214
           T      +K + +F     +++ + ++E K
Sbjct: 310 TEDEPQVQKYDDSF-----DDVDRTLDEWK 334

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (233), Expect = 2e-23
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 9/144 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSR 87
              + HRDL   N L+  +    +K+ DFG ++      ++    T     + +PEV S 
Sbjct: 119 EACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             Y  K +DVWS GV ++ +        +        + IS      +++      S   
Sbjct: 177 SRYSSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----GFRLYKPRLASTHV 231

Query: 148 RNLLSRIFVANPSRRITIKEIKSH 171
             +++  +   P  R     +   
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQ 255

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.5 bits (236), Expect = 2e-23
 Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 45/196 (22%)

Query: 30  SQQICHRDLKLENTLLD--GSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSR 87
              I H D+K EN L++   SP   ++I       +        +++ T  Y +PEVL  
Sbjct: 144 RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG 203

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPF--EDQEDPKNFRKTISRIMAVQYKIPDYV---- 141
             +    AD+WS    ++ ++ G + F  ++          I++I+ +  ++P Y+    
Sbjct: 204 APWGCG-ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 262

Query: 142 ------------------------------------HISQDCRNLLSRIFVANPSRRITI 165
                                                 +++  + LS +   +P +R   
Sbjct: 263 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 322

Query: 166 KEIKSHPWFLKNLPRE 181
             + +HPW    L  E
Sbjct: 323 GGLVNHPWLKDTLGME 338

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 3e-23
 Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 11/161 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPEVL 85
           +    HRDL   N L++ +     K+ DFG S+                    + APE +
Sbjct: 128 NMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 185

Query: 86  SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
           S R++    +DVWS G+ ++ ++        +       K I+      +++P  +    
Sbjct: 186 SYRKFTSA-SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND----GFRLPTPMDCPS 240

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETA 186
               L+ + +    +RR    +I S    L   P  L   A
Sbjct: 241 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLA 281

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 3e-23
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSRR 88
           +Q  HRDL   N L++      +K+ DFG S+  L      S        +  PEVL   
Sbjct: 119 KQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176

Query: 89  EYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           ++  K +D+W+ GV ++ +  +G  P+E   + +              ++      S+  
Sbjct: 177 KFSSK-SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKV 230

Query: 148 RNLLSRIFVANPSRRITIKEIKSH 171
             ++   +      R T K + S+
Sbjct: 231 YTIMYSCWHEKADERPTFKILLSN 254

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 1e-22
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 18/153 (11%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSLLHSRPKSTVGTPAYIAPEVLS 86
           +   HRDL   N LL      +  I DFG SK        ++   +      + APE ++
Sbjct: 128 KNFVHRDLAARNVLLVNRHYAK--ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185

Query: 87  RREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQY-KIPDYVHIS 144
            R++  + +DVWS GVT++  L  G  P++  + P    + ++ I   +  + P      
Sbjct: 186 FRKFSSR-SDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAFIEQGKRMECPP--ECP 238

Query: 145 QDCRNLLSRIFVANPSRRITIKEIKS---HPWF 174
            +   L+S  ++     R     ++      ++
Sbjct: 239 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 2e-22
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST--VGTPAYIAPEVLSR 87
           S++  HRD+   N L+  +    +K+ DFG S+     +  K++       ++APE ++ 
Sbjct: 126 SKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
           R +    +DVW  GV ++ +L+            +    I        ++P   +     
Sbjct: 184 RRFTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN----GERLPMPPNCPPTL 238

Query: 148 RNLLSRIFVANPSRRITIKEIKSH 171
            +L+++ +  +PSRR    E+K+ 
Sbjct: 239 YSLMTKCWAYDPSRRPRFTELKAQ 262

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.4 bits (226), Expect = 3e-22
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 22/160 (13%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSLLHSRPKSTVGTPAYIAPEV 84
               HRDL   N L++ +     K+ DFG S+      S   ++          + APE 
Sbjct: 147 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 204

Query: 85  LSRREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI 143
           +  R++    +DVWS G+ ++ ++  G  P+ D  +               Y++P  +  
Sbjct: 205 IQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD-----YRLPPPMDC 258

Query: 144 SQDCRNLLSRIFVANPSRRITIKEI-------KSHPWFLK 176
                 L+   +  + + R    +I         +P  LK
Sbjct: 259 PSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 298

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 4e-22
 Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 16/152 (10%)

Query: 31  QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SLLHSRPKSTVGTPAYIAPEVLS 86
               HRDL   N LL        KI DFG SK+       +           + APE ++
Sbjct: 126 SNFVHRDLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183

Query: 87  RREYDGKLADVWSCGVTLYVML-VGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
             ++  K +DVWS GV ++     G  P+   +  +     ++ ++    ++       +
Sbjct: 184 YYKFSSK-SDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAMLEKGERMGCPAGCPR 237

Query: 146 DCRNLLSRIFVANPSRRITIKEIKS---HPWF 174
           +  +L++  +  +   R     ++    + ++
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 5e-22
 Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 11/149 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSR 87
            +   HRDL+  N L+        KI DFG ++      ++  +       + APE ++ 
Sbjct: 127 ERNYIHRDLRAANILVS--DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
             +  K +DVWS G+ L  ++                + + R     Y++    +  ++ 
Sbjct: 185 GTFTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----GYRMVRPDNCPEEL 239

Query: 148 RNLLSRIFVANPSRRITIKEIKS--HPWF 174
             L+   +   P  R T   ++S    +F
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 90.6 bits (224), Expect = 5e-22
 Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPR---LKICDFGYSK--------SSLLHSRPKSTVGTPA 78
            + + +RD+K +N L+    +     + + DFG  K          + +   K+  GT  
Sbjct: 119 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 178

Query: 79  YIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP 138
           Y++      RE   +  D+ + G      L G+ P++        ++   RI   +   P
Sbjct: 179 YMSINTHLGREQSRR-DDLEALGHVFMYFLRGSLPWQG-LKAATNKQKYERIGEKKQSTP 236

Query: 139 DYV---HISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTETAQAIY 190
                    ++    +                ++        +   L  T    +
Sbjct: 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG---LFSKVLERLNTTEDENF 288

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 90.3 bits (223), Expect = 6e-22
 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 30  SQQICHRDLKLENTLL-DGSPAPRLKICDFGYSK--------SSLLHSRPKSTVGTPAYI 80
           S+   HRD+K +N L+  G     + I DFG +K          + +   K+  GT  Y 
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 81  APEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY 140
           +       E   +  D+ S G  L    +G+ P++  +     +K   RI   +   P  
Sbjct: 181 SINTHLGIEQSRR-DDLESLGYVLMYFNLGSLPWQGLKAATKRQK-YERISEKKMSTPIE 238

Query: 141 V---HISQDCRNLLSRIFVANPSRRIT---IKEIKSHPWFLKNLP 179
           V       +    L+         +     ++++  + +  +   
Sbjct: 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 283

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 89.8 bits (222), Expect = 8e-22
 Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 12/154 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSLLHSRPKSTVGTPAYIAPEVLSR 87
            +   HRDL   N L+  +    +K+ DFG S+  +   ++          + APE L+ 
Sbjct: 133 KKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190

Query: 88  REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC 147
            ++  K +DVW+ GV L+ +           D     + + +     Y++       +  
Sbjct: 191 NKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----DYRMERPEGCPEKV 245

Query: 148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRE 181
             L+   +  NPS R +  EI       + + +E
Sbjct: 246 YELMRACWQWNPSDRPSFAEIHQ---AFETMFQE 276

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.5 bits (221), Expect = 1e-21
 Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 10/142 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
            ++  HRDL   N L+  +    +KI DFG S+   S+  +    +      ++ PE + 
Sbjct: 158 ERKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 215

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
              Y  + +DVW+ GV L+ +             +     +         +    +   +
Sbjct: 216 YNRYTTE-SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD----GNILACPENCPLE 270

Query: 147 CRNLLSRIFVANPSRRITIKEI 168
             NL+   +   P+ R +   I
Sbjct: 271 LYNLMRLCWSKLPADRPSFCSI 292

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (215), Expect = 9e-21
 Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
           S++  HRDL   N LL       +KICDFG ++       + R         ++APE + 
Sbjct: 152 SRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 209

Query: 87  RREYDGKLADVWSCGVTLYVMLVG-AYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ 145
            R Y  + +DVWS GV L+ +    A P+   +  + F + +      + + PD  + + 
Sbjct: 210 DRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE--GTRMRAPD--YTTP 264

Query: 146 DCRNLLSRIFVANPSRRITIKEIKSH 171
           +    +   +   PS+R T  E+  H
Sbjct: 265 EMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 5e-19
 Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 6/140 (4%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRL-KICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRR 88
           S++  HRDL   N L+      ++              + +  +      ++APE L  R
Sbjct: 153 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 212

Query: 89  EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCR 148
            Y  + +DVWS GV L+ +             +   K +       +++    + + +  
Sbjct: 213 IYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE----GHRMDKPSNCTNELY 267

Query: 149 NLLSRIFVANPSRRITIKEI 168
            ++   + A PS+R T K++
Sbjct: 268 MMMRDCWHAVPSQRPTFKQL 287

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 6e-19
 Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 28/173 (16%)

Query: 23  DIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFG-----YSKSSLLHSRPKSTVGTP 77
           +I  +     I HRDLK +N L+  +      I D G      S +  +   P   VGT 
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176

Query: 78  AYIAPEVLSRREYDGKL-----ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA 132
            Y+APEVL              AD+++ G+  + +          ED +     +     
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236

Query: 133 VQYKIPDYV----------------HISQDCRNLLSRIFVANPSRRITIKEIK 169
              ++   V                   +    ++   + AN + R+T   IK
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (203), Expect = 6e-19
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 47/221 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE 89
           S  I HRDLK  N ++       LKI DFG ++++         V T  Y APEV+    
Sbjct: 137 SAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194

Query: 90  YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA--------VQYKIPDYV 141
           Y     D+WS G  +  M+     F  ++    + K I ++          +Q  + +YV
Sbjct: 195 YKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253

Query: 142 H----------------------------ISQDCRNLLSRIFVANPSRRITIKEIKSHPW 173
                                         +   R+LLS++ V +P++RI++ +   HP+
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

Query: 174 FLKNLPRELTETAQAIYYRKENPTFSLQSVEEITKIVEEAK 214
                                 P    + ++E    +EE K
Sbjct: 314 I--------NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWK 346

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 3e-18
 Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 15/159 (9%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST---VGTPAYIAPEVLS 86
           S+   HRDL   N LL        KICDFG ++     S             ++APE + 
Sbjct: 163 SKNCIHRDLAARNILLTHG--RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
              Y  + +DVWS G+ L+ +              +      +++   +++    H   +
Sbjct: 221 NCVYTFE-SDVWSYGIFLWELFSLGSSPYPGMPVDS---KFYKMIKEGFRMLSPEHAPAE 276

Query: 147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTET 185
             +++   + A+P +R T K+I      ++ + ++++E+
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQI------VQLIEKQISES 309

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 7e-18
 Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSLLHSRPKSTVGTPAYIAPEVLS 86
           + +  HRDL   N ++       +KI DFG ++    +  + +    +    +++PE L 
Sbjct: 151 ANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 208

Query: 87  RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD 146
              +    +DVWS GV L+ +   A         +   + +          PD  +    
Sbjct: 209 DGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME--GGLLDKPD--NCPDM 263

Query: 147 CRNLLSRIFVANPSRRITIKEI------KSHPWF 174
              L+   +  NP  R +  EI      +  P F
Sbjct: 264 LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 16/75 (21%)

Query: 30  SQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLS--- 86
            + I H DL   N L+       + I DF  S                  +  +V +   
Sbjct: 121 HRGIVHGDLSQYNVLVSE---EGIWIIDFPQSVE---VGEEGW----REILERDVRNIIT 170

Query: 87  --RREYDGKLADVWS 99
              R Y  +  D+ S
Sbjct: 171 YFSRTYRTE-KDINS 184

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	265
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.98
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.41
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.65
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.63
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.41
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	93.08
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	92.64
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	81.57

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=298.54  Aligned_cols=175  Identities=32%  Similarity=0.473  Sum_probs=142.3

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||||.+ +|.+++..++         ++.|++.||.|||++||+||||||+|||++.++.  +||+|||+|+.....   
T Consensus        82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~--~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECEETTEE
T ss_pred             EeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCC--EEEccchhheeeccCCcc
Confidence            899976 9999886543         4778999999999999999999999999988775  999999999854322   


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ......+||+.|+|||++.+..+++.++|||||||++|+|++|+.||............   ........+.+..+++++
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~  236 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAP  236 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH---HHTTCTTSTTGGGSCHHH
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH---HhcCCCCCCccccCCHHH
Confidence            22345679999999999998888777799999999999999999999876544332222   222223334445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ++||.+||..||.+|||+.++++||||++.+++
T Consensus       237 ~~li~~~L~~dP~~R~t~~eil~hpwf~~~l~k  269 (271)
T d1nvra_         237 LALLHKILVENPSARITIPDIKKDRWYNKPLKK  269 (271)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHhhCcCCCC
Confidence            999999999999999999999999999877653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-43  Score=290.84  Aligned_cols=173  Identities=25%  Similarity=0.394  Sum_probs=140.8

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-SRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~~~   70 (265)
                      ||||.+ +|.+++..+.        ++.|++.||.|||++||+||||||+|||++.++.  +||+|||+|+..... ...
T Consensus        96 mEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~--vkl~DFG~a~~~~~~~~~~  173 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR  173 (293)
T ss_dssp             EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSTTCCB
T ss_pred             EEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCc--Eeeccchhheeeccccccc
Confidence            898876 9999877544        3778999999999999999999999999988765  999999999865433 233


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+....   .......+.+..+++.+++|
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l  249 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDF  249 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSSGGGSCHHHHHH
T ss_pred             cccccCCCccChhhhcCCCCC-chhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHH---hCCCCCCCCcccCCHHHHHH
Confidence            456799999999999988775 45999999999999999999998765443333222   22223344455789999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      |.+||..||.+|||+.++++||||+...+
T Consensus       250 i~~~L~~dP~~R~s~~eil~Hp~~~~~~~  278 (293)
T d1yhwa1         250 LNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (293)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHHHccCChhHCcCHHHHhcCHhhCCCCC
Confidence            99999999999999999999999975543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=290.91  Aligned_cols=166  Identities=33%  Similarity=0.573  Sum_probs=138.8

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||||.+ +|.+++...+.         +.|++.||.|||++|||||||||+|||++.++.  +||+|||+|+.... ...
T Consensus        85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~--~kl~DFG~a~~~~~-~~~  161 (263)
T d2j4za1          85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPS-SRR  161 (263)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCCSCSCCCC-CCC
T ss_pred             EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCC--EeecccceeeecCC-Ccc
Confidence            899876 99999987653         778999999999999999999999999988776  99999999975443 233


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+....    .....+.......|.  .+++++++|
T Consensus       162 ~~~~Gt~~Y~APE~~~~~~~~-~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~p~--~~s~~~~~l  234 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ----ETYKRISRVEFTFPD--FVTEGARDL  234 (263)
T ss_dssp             EETTEEGGGCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHTTCCCCCT--TSCHHHHHH
T ss_pred             cccCCCCcccCHHHHcCCCCC-chhhhhhHhHHHHHHhcCCCCCCCCCHH----HHHHHHHcCCCCCCc--cCCHHHHHH
Confidence            456799999999999988775 5599999999999999999999775433    333344444444443  689999999


Q ss_pred             HHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          151 LSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       151 i~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      |.+||..||.+|||+.++++||||+.
T Consensus       235 i~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         235 ISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            99999999999999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-42  Score=290.96  Aligned_cols=172  Identities=33%  Similarity=0.558  Sum_probs=128.0

Q ss_pred             Ccccc-cchHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||||. ++|.+++..++         ++.|++.||.|||++||+||||||+|||+.. +..+.+||+|||+|+.......
T Consensus        86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             EeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence            89997 59999997654         3778999999999999999999999999964 2234599999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  147 (265)
                      ....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......    ...+......  .+.+..+++++
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~-~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~  240 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKL----FEQILKAEYEFDSPYWDDISDSA  240 (307)
T ss_dssp             -------CTTSCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHTTCCCCCTTTTTTSCHHH
T ss_pred             eeeeeeCccccCcHHHcCCCCC-cHHHhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHhccCCCCCCccccCCCHHH
Confidence            5667899999999999988775 559999999999999999999987654332    2333333332  34445789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||.+|||+.++++||||++.
T Consensus       241 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             HHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999999753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-42  Score=282.74  Aligned_cols=167  Identities=22%  Similarity=0.382  Sum_probs=133.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcC--ceecCCCcCcEEEcC-CCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQ--ICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~--ivH~dlkp~NIll~~-~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||++.+ +|.+++....         ++.|++.+|.|||+++  |+||||||+|||+++ ++.  +||+|||+|+... .
T Consensus        91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~--~Kl~DFGla~~~~-~  167 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGLATLKR-A  167 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSC--EEECCTTGGGGCC-T
T ss_pred             EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCC--EEEeecCcceecc-C
Confidence            799876 9999988654         3678999999999999  999999999999964 444  9999999997433 2


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ......+||+.|+|||++.+ .+ +.++|||||||++|+|++|+.||.+......+..   .+............+++++
T Consensus       168 ~~~~~~~GT~~Y~aPE~~~~-~~-~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~  242 (270)
T d1t4ha_         168 SFAKAVIGTPEFMAPEMYEE-KY-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEV  242 (270)
T ss_dssp             TSBEESCSSCCCCCGGGGGT-CC-CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHH
T ss_pred             CccCCcccCccccCHHHhCC-CC-CCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHH---HHHcCCCCcccCccCCHHH
Confidence            23345679999999999876 45 4569999999999999999999987665443333   2222222222234578999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFL  175 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~  175 (265)
                      ++||.+||..||++|||+.++++||||+
T Consensus       243 ~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         243 KEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            9999999999999999999999999995

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-42  Score=285.67  Aligned_cols=174  Identities=25%  Similarity=0.360  Sum_probs=137.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-S   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~   68 (265)
                      ||||.+ +|.+++..+.          ++.|++.||.|||++||+||||||+|||++.++.  +||+|||+|+..... .
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~--~Kl~DFG~a~~~~~~~~  165 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNTRTIQ  165 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECHHHHH
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCC--EEEEechhhhccCCCcc
Confidence            899876 8999876543          2678999999999999999999999999998776  999999998643322 1


Q ss_pred             CCCCCcCCCCCcccccccC-----CcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCC
Q 024572           69 RPKSTVGTPAYIAPEVLSR-----REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHI  143 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (265)
                      .....+||+.|+|||++..     ..+ +.++|||||||++|+|++|+.||.+......+..+..   ......+.+..+
T Consensus       166 ~~~~~~Gt~~y~APE~l~~~~~~~~~y-~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~~  241 (288)
T d2jfla1         166 RRDSFIGTPYWMAPEVVMCETSKDRPY-DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK---SEPPTLAQPSRW  241 (288)
T ss_dssp             HHTCCCSCCTTCCHHHHTTCSTTTSST-TTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHH---SCCCCCSSGGGS
T ss_pred             cccccccccccCCHHHHhhcccCCCCC-ChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc---CCCCCCCccccC
Confidence            2235679999999999853     333 4569999999999999999999988766554433322   111223344578


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ++++++||.+||..||.+|||+.++++||||+.....
T Consensus       242 s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~~~  278 (288)
T d2jfla1         242 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK  278 (288)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCCCH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCC
Confidence            9999999999999999999999999999999865543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-42  Score=284.25  Aligned_cols=168  Identities=29%  Similarity=0.517  Sum_probs=136.1

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC--
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS--   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~--   68 (265)
                      |||+.+ +|.+++..++.         +.|++.+|.|||++|||||||||+|||++.++.  +||+|||+|+......  
T Consensus        87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~--vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECC-----
T ss_pred             EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCce--EEecccccceecccCCcc
Confidence            899876 99999887653         677899999999999999999999999988776  9999999998654322  


Q ss_pred             -CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 -RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                       .....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+...    ....+......+|  ..+++++
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~-~~~DiwSlGvilyell~g~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~  237 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYL----IFQKIIKLEYDFP--EKFFPKA  237 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCC-HHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHTTCCCCC--TTCCHHH
T ss_pred             cccccccCCccccCceeeccCCCC-cccceehhhHHHHHHhhCCCCCCCcCHHH----HHHHHHcCCCCCC--ccCCHHH
Confidence             23345799999999999988775 56999999999999999999998765433    3334444444444  3689999


Q ss_pred             HHHHHHhcccCCCCCCCHHH------HhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKE------IKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~e------ll~h~~f~~~  177 (265)
                      ++||.+||..||.+|||++|      +++||||+..
T Consensus       238 ~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         238 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             HHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence            99999999999999999988      5889999753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-42  Score=292.47  Aligned_cols=177  Identities=32%  Similarity=0.534  Sum_probs=141.0

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||||.+ +|.+++..++           ++.+++.|+.|||++||+||||||+|||++... .+.+||+|||+|+.....
T Consensus        88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCC
Confidence            899975 9999998653           277799999999999999999999999997633 346999999999876666


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCC--CCCCCH
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPD--YVHISQ  145 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  145 (265)
                      ......+||+.|+|||++.+..++ .++|||||||++|+|+||+.||.+.............+.......|.  +..+++
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~y~-~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  246 (335)
T d2ozaa1         168 NSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  246 (335)
T ss_dssp             CCCCCCSCCCSSCCCCCCCGGGGS-HHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCH
T ss_pred             CccccccCCcccCCcHHHcCCCCC-HHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCH
Confidence            666677899999999999988775 55999999999999999999998765544433333333333333332  235899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ++++||.+||..||++|||+.++++||||.+..
T Consensus       247 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  279 (335)
T d2ozaa1         247 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  279 (335)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcCHHhhCCC
Confidence            999999999999999999999999999997543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.1e-42  Score=293.46  Aligned_cols=172  Identities=26%  Similarity=0.464  Sum_probs=141.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.          ++.||+.||.|||++|||||||||+|||++.+..+.+||+|||+|+.......
T Consensus       102 mE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             ECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred             EEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence            899875 9999985432          37789999999999999999999999999765445699999999987665555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  147 (265)
                      .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+    ..+.......+  .+..+++++
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~-~~~DiwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  256 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVG-YYTDMWSVGVLSYILLSGLSPFGGENDDETL----RNVKSCDWNMDDSAFSGISEDG  256 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBC-HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCSCCGGGGGCCHHH
T ss_pred             cceecCcccccCHHHHcCCCCC-hhHhhhhhhHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCcccccCCCHHH
Confidence            5567899999999999988875 5699999999999999999999876543333    33333333333  234689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||++|||+.++|+||||+..
T Consensus       257 ~~li~~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         257 KDFIRKLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            999999999999999999999999999754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5.1e-42  Score=293.06  Aligned_cols=172  Identities=23%  Similarity=0.454  Sum_probs=142.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||+|.+ +|.+++..++          ++.+|+.||.|||++|||||||||+|||++....+.+||+|||+|+.......
T Consensus       105 mE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         105 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             EEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCc
Confidence            899875 9988876543          37889999999999999999999999999865555699999999987665555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  147 (265)
                      .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......+    ..+.......+  .+..+++++
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvilyelltG~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~  259 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDREPVG-FYTDMWAIGVLGYVLLSGLSPFAGEDDLETL----QNVKRCDWEFDEDAFSSVSPEA  259 (352)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBC-HHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHHCCCCCCSSTTTTSCHHH
T ss_pred             eeeccCcccccCHHHHcCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCcccccCCCHHH
Confidence            5566899999999999988775 5599999999999999999999876554333    33333333333  345789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      ++||.+||..||.+|||+.++|+||||+..
T Consensus       260 ~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-41  Score=284.78  Aligned_cols=168  Identities=30%  Similarity=0.522  Sum_probs=139.6

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCC-CCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLL-HSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~-~~~   69 (265)
                      ||++.+ +|.+++...+.         +.+++.||.|||++||+||||||+|||++.++.  +||+|||+|+.... ...
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~--vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCCTTCC
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCC--EEEeecccccccccCCcc
Confidence            788876 89999887653         677899999999999999999999999998876  99999999986543 333


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      ....+||+.|+|||++.+..|+ .++|||||||++|+|++|+.||.+.+...    ....+......+|  ..+++++++
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~~y~-~~~DiwSlGvilyeml~G~~pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~d  234 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHER----LFELILMEEIRFP--RTLSPEAKS  234 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHH
T ss_pred             cccceeCHHHhhhhhccCCCCC-hhhcccchhhHHHHHHHCCCCCCCcCHHH----HHHHHhcCCCCCC--ccCCHHHHH
Confidence            4456899999999999998885 45999999999999999999998865433    2333344444444  468999999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          150 LLSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       150 li~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      ||.+||.+||.+|++     +.++++||||+..
T Consensus       235 li~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            999999999999994     8999999999764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=288.21  Aligned_cols=172  Identities=26%  Similarity=0.390  Sum_probs=131.4

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhh-cCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |||+.+ +|.+++..++.         +.|++.|+.|||+ +||+||||||+|||++.++.  +||+|||+|+.... ..
T Consensus        83 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~-~~  159 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLID-SM  159 (322)
T ss_dssp             EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC--EEECCCCCCHHHHH-HT
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCC--EEEeeCCCccccCC-Cc
Confidence            798886 99999986543         6688999999997 59999999999999988776  99999999975432 23


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH-----------------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKT-----------------------  126 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~-----------------------  126 (265)
                      ..+.+||+.|+|||++.+..|+. ++||||+||++|+|++|+.||.+..........                       
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~y~~-~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTHYSV-QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSCCCT-THHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             cccccCCccccCchHHcCCCCCc-HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence            34568999999999999988765 499999999999999999999875432211000                       


Q ss_pred             ---------------HHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          127 ---------------ISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       127 ---------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                     ................++.++++||.+||..||.+|||+.++|+||||++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                           00000000000111236889999999999999999999999999999964

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.8e-41  Score=288.95  Aligned_cols=171  Identities=25%  Similarity=0.346  Sum_probs=138.1

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      |||+.+ +|.+++..+..         +.+|+.||.|||++|||||||||+|||++.++.  +||+|||+|+..... ..
T Consensus        86 mE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~--iKl~DFGla~~~~~~-~~  162 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-KP  162 (364)
T ss_dssp             ECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSC--EEECCCTTCEECSSS-CC
T ss_pred             EEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCc--EEEeeeceeeecCCC-cc
Confidence            899975 99999876653         567999999999999999999999999988776  999999999855433 34


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++......+.++|||||||++|+|++|+.||........ ..........  ..+.+..+++++++|
T Consensus       163 ~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~~~~~~~~--~~~~~~~~s~~~~~l  239 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTM--AVELPDSFSPELRSL  239 (364)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH-HHHHHHSSSC--CCCCCSSSCHHHHHH
T ss_pred             cccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcccC--CCCCCCCCCHHHHHH
Confidence            4567999999999997655445669999999999999999999987654332 2222222222  233344789999999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRIT-----IKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~s-----~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|||     ++++++||||+..
T Consensus       240 i~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         240 LEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             HHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             HHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            99999999999999     7999999999764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.7e-41  Score=282.98  Aligned_cols=170  Identities=24%  Similarity=0.300  Sum_probs=134.8

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||+|.+ +|..++..+.         ++.|++.||.|||++|||||||||+|||++.++.  +||+|||+|+....   .
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~--~Kl~DFG~a~~~~~---~  168 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL--VKLGDFGSASIMAP---A  168 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE--EEECCCTTCBSSSS---B
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCC--EEEeecccccccCC---C
Confidence            788877 4544444333         3788999999999999999999999999998775  99999999975432   3


Q ss_pred             CCCcCCCCCcccccccCC---cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 KSTVGTPAYIAPEVLSRR---EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ...+||+.|+|||++.+.   .| +.++|||||||++|+|++|+.||.+......+    ..+............+++.+
T Consensus       169 ~~~~GT~~Y~APE~~~~~~~~~y-~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~s~~~  243 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNESPALQSGHWSEYF  243 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTTTSCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCSCTTSCHHH
T ss_pred             CccccCccccCHHHHhccCCCCc-CchhhhhhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCCCCCCCHHH
Confidence            456799999999998652   34 45699999999999999999999876543333    23333333333445689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCCCh
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNLPR  180 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~~  180 (265)
                      ++||.+||..||.+|||+.++++||||.+..+.
T Consensus       244 ~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~~  276 (309)
T d1u5ra_         244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP  276 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred             HHHHHHHCcCChhHCcCHHHHHhCHHhcCCCCc
Confidence            999999999999999999999999999766543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-40  Score=281.07  Aligned_cols=166  Identities=34%  Similarity=0.536  Sum_probs=137.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++....         +..+++.++.|||++||+||||||+|||++.++.  +||+|||+|+....  ..
T Consensus        83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~--vkL~DFG~a~~~~~--~~  158 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH--IKITDFGFAKYVPD--VT  158 (316)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC--EEECCCSSCEECSS--CB
T ss_pred             eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCC--EEEecCccceEecc--cc
Confidence            788876 7888777654         3678999999999999999999999999988776  99999999986543  33


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..++. ++|||||||++|+|++|+.||.+.....    ....+.......|  ..++++++++
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~y~~-~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~l  231 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKPYNK-SIDWWSFGILIYEMLAGYTPFYDSNTMK----TYEKILNAELRFP--PFFNEDVKDL  231 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCT-THHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHHCCCCCC--TTSCHHHHHH
T ss_pred             ccccCcccccCHHHHcCCCCCc-hhhccccchhHHHHHhCCCCCCCcCHHH----HHHHHHcCCCCCC--CCCCHHHHHH
Confidence            4568999999999999888864 5999999999999999999998765433    3333444444443  3689999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|+     |++++++||||++.
T Consensus       232 i~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         232 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            9999999999996     99999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.9e-41  Score=277.65  Aligned_cols=171  Identities=32%  Similarity=0.549  Sum_probs=140.8

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      |||+.+ +|.+++..++.         +.|++.||.|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus        89 mE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~--~kl~DFG~a~~~~~~~~~  166 (277)
T d1phka_          89 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKL  166 (277)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCCB
T ss_pred             EEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCC--eEEccchheeEccCCCce
Confidence            899965 99999987654         778999999999999999999999999988776  999999999876655555


Q ss_pred             CCCcCCCCCcccccccCC-----cCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--cCCCCCCC
Q 024572           71 KSTVGTPAYIAPEVLSRR-----EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--KIPDYVHI  143 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  143 (265)
                      ....||+.|+|||.+.+.     ...+.++||||+||++|+|++|+.||.+........    .+.....  ..+....+
T Consensus       167 ~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~----~i~~~~~~~~~~~~~~~  242 (277)
T d1phka_         167 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR----MIMSGNYQFGSPEWDDY  242 (277)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCCTTTGGGS
T ss_pred             eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHH----HHHhCCCCCCCcccccC
Confidence            667899999999998642     223556999999999999999999998865433332    2333333  33445579


Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          144 SQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       144 ~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      |+++++||.+||..||.+|||+.++++||||++.
T Consensus       243 s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         243 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            9999999999999999999999999999999764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-41  Score=279.24  Aligned_cols=166  Identities=24%  Similarity=0.407  Sum_probs=125.7

Q ss_pred             Cccccc-chHHHHHHh-------------ccccchHHHHHhhhhcC-----ceecCCCcCcEEEcCCCCCcEEEeccCCc
Q 024572            1 MQLGVS-SLSEFVMLE-------------GSVKMKPDIFFSSLSQQ-----ICHRDLKLENTLLDGSPAPRLKICDFGYS   61 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------~~~~~i~~~l~~lH~~~-----ivH~dlkp~NIll~~~~~~~vkl~Dfg~a   61 (265)
                      ||||.+ +|.+++...             .++.|++.+|.|||++|     ||||||||+|||++.++.  +||+|||+|
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~--vkl~DFG~a  161 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN--VKLGDFGLA  161 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSC--EEECCHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCc--EEEeeccce
Confidence            899976 999988642             24778999999999977     999999999999998776  999999999


Q ss_pred             ccCCCCC-CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCC
Q 024572           62 KSSLLHS-RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDY  140 (265)
Q Consensus        62 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (265)
                      +...... ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.....    ....+...... +.+
T Consensus       162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~-~~~DIwSlGvilyel~tg~~Pf~~~~~~~----~~~~i~~~~~~-~~~  235 (269)
T d2java1         162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKE----LAGKIREGKFR-RIP  235 (269)
T ss_dssp             HHC-----------CCCSCCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHTCCC-CCC
T ss_pred             eecccCCCccccCCCCcccCCHHHHcCCCCC-hHHHHHhhCHHHHHHhhCCCCCCCCCHHH----HHHHHHcCCCC-CCC
Confidence            8654332 33456799999999999887775 56999999999999999999998755432    22333333322 233


Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 024572          141 VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF  174 (265)
Q Consensus       141 ~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f  174 (265)
                      ..+++++++||.+||..||.+|||+.++++|||+
T Consensus       236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            4789999999999999999999999999999995

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=278.28  Aligned_cols=175  Identities=25%  Similarity=0.297  Sum_probs=136.5

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+.+...+..+          .+++|++.+|.|||++||+||||||+|||++.++.  +||+|||+|+...... .
T Consensus        79 mE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~--~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCGGGSTTTSCCCC
T ss_pred             hhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCc--cccccCccccccCCCccc
Confidence            788888555544432          24778999999999999999999999999988776  9999999997654332 3


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc-C-----------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK-I-----------  137 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~-----------  137 (265)
                      ....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+....+.+..+.......... .           
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ua2a_         157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT  236 (299)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhh
Confidence            3456799999999999876665677999999999999999999998877665555544332111100 0           


Q ss_pred             ----C------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          138 ----P------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       138 ----~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                          +      ....+++++++||.+||..||++|||+.|+|+||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             hccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence                0      012468899999999999999999999999999999753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-41  Score=281.16  Aligned_cols=172  Identities=31%  Similarity=0.556  Sum_probs=141.0

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCC--CcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPA--PRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~--~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||||.+ +|.+++..++.         +.+++.||.|||++||+||||||+|||++.++.  ..+||+|||+|+......
T Consensus        92 ~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~  171 (293)
T d1jksa_          92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN  171 (293)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC
T ss_pred             EEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc
Confidence            799875 99999987653         677899999999999999999999999976653  259999999998766555


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQD  146 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  146 (265)
                      ......+|+.|+|||++.+..++ .++||||+||++|+|++|+.||.+......    +..+.......+  .+..+++.
T Consensus       172 ~~~~~~~t~~y~APE~~~~~~~~-~~~DiwSlGvilyell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~  246 (293)
T d1jksa_         172 EFKNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSAL  246 (293)
T ss_dssp             BCSCCCCCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHTTCCCCCHHHHTTSCHH
T ss_pred             cccccCCCCcccCHHHHcCCCCC-CcccchhhhHHHHHHHcCCCCCCCCCHHHH----HHHHHhcCCCCCchhcCCCCHH
Confidence            56667899999999999987775 559999999999999999999987654333    233333333322  23468999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                      +++||.+||..||.+|||+.++++||||+..
T Consensus       247 ~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         247 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999999999999999753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-40  Score=278.52  Aligned_cols=173  Identities=25%  Similarity=0.312  Sum_probs=137.2

Q ss_pred             CcccccchHHHHHH-----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVSSLSEFVML-----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~sL~~~~~~-----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+.+..+...           +.++.|++.+|.|||++|||||||||+|||++..+.  +||+|||+++.......
T Consensus        94 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~--~kl~dfg~~~~~~~~~~  171 (305)
T d1blxa_          94 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMA  171 (305)
T ss_dssp             EECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECSCCSCCCCCGGGG
T ss_pred             EEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCC--eeecchhhhhhhccccc
Confidence            57777754444332           235888999999999999999999999999988776  99999999986655555


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-c------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-K------------  136 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~------------  136 (265)
                      .....||+.|+|||++.+..++ .++||||+||++|+|++|+.||.+......+..++........ .            
T Consensus       172 ~~~~~gT~~Y~APE~~~~~~y~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
T d1blxa_         172 LTSVVVTLWYRAPEVLLQSSYA-TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF  250 (305)
T ss_dssp             GCCCCCCCTTCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS
T ss_pred             CCCcccChhhcCcchhcCCCCC-hhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhh
Confidence            5667899999999999988875 4599999999999999999999887665555554433211100 0            


Q ss_pred             --------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          137 --------IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       137 --------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                              ......+++.+++||.+||.+||.+|||+.|+|+||||+.
T Consensus       251 ~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~  298 (305)
T d1blxa_         251 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  298 (305)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             ccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcC
Confidence                    0012357889999999999999999999999999999975

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-40  Score=282.74  Aligned_cols=166  Identities=28%  Similarity=0.481  Sum_probs=136.4

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP   70 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~   70 (265)
                      ||++.+ +|.+++..++         ++.||+.||.|||++|||||||||+|||++.++.  +||+|||+|+....  ..
T Consensus       120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~--ikL~DFG~a~~~~~--~~  195 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKG--RT  195 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSS--CB
T ss_pred             cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCC--EEeeeceeeeeccc--cc
Confidence            566655 8888887654         4778999999999999999999999999988775  99999999986543  33


Q ss_pred             CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 024572           71 KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNL  150 (265)
Q Consensus        71 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (265)
                      ...+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.....    .+..+.......|  ..+++++.+|
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~~~-~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~i~~~~~~~p--~~~s~~~~~l  268 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQ----IYEKIVSGKVRFP--SHFSSDLKDL  268 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCCCCCC--TTCCHHHHHH
T ss_pred             ccccCccccCCHHHHcCCCCC-ccccccchhHHHHHHHhCCCCCCCcCHHH----HHHHHhcCCCCCC--ccCCHHHHHH
Confidence            456799999999999988875 55999999999999999999998764432    3333344443333  4789999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCcccCCC
Q 024572          151 LSRIFVANPSRRI-----TIKEIKSHPWFLKN  177 (265)
Q Consensus       151 i~~~L~~dP~~R~-----s~~ell~h~~f~~~  177 (265)
                      |.+||..||.+|+     |+.++++||||+..
T Consensus       269 i~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            9999999999995     99999999999764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-40  Score=272.81  Aligned_cols=165  Identities=31%  Similarity=0.462  Sum_probs=133.5

Q ss_pred             Cccccc--chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS--SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~--sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+  ++.+++..+.         ++.|++.||.|||++||+||||||+|||++.+. +.+||+|||+|+.... ..
T Consensus        88 ~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~-~~vkl~DFG~a~~~~~-~~  165 (273)
T d1xwsa_          88 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-GELKLIDFGSGALLKD-TV  165 (273)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECCS-SC
T ss_pred             EEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCC-CeEEECccccceeccc-cc
Confidence            677753  6777776543         477899999999999999999999999998553 2499999999975433 33


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....||+.|+|||++.+..+.+.++|||||||++|+|++|+.||....      .    +......  ....+|+++++
T Consensus       166 ~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~----i~~~~~~--~~~~~s~~~~~  233 (273)
T d1xwsa_         166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------E----IIRGQVF--FRQRVSSECQH  233 (273)
T ss_dssp             BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------H----HHHCCCC--CSSCCCHHHHH
T ss_pred             ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------H----HhhcccC--CCCCCCHHHHH
Confidence            3456799999999999888877777999999999999999999997521      1    1222223  33468999999


Q ss_pred             HHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          150 LLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                      ||.+||..||.+|||+.++++||||++...
T Consensus       234 li~~~L~~dp~~R~s~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         234 LIRWCLALRPSDRPTFEEIQNHPWMQDVLL  263 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             HHHHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence            999999999999999999999999987543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-40  Score=276.23  Aligned_cols=167  Identities=33%  Similarity=0.540  Sum_probs=137.9

Q ss_pred             Cccccc-chHHHHHHhcc---------ccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVS-SLSEFVMLEGS---------VKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~~---------~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      |||+.+ +|.+++..++.         +.+|+.||.|||++||+||||||+|||++.++.  +||+|||+++...... .
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~--~kl~DFG~a~~~~~~~~~  159 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGDAK  159 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCc--eeccccchhhhccccccc
Confidence            788876 99999986653         677899999999999999999999999998776  9999999998554333 3


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRN  149 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (265)
                      .....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......    ...+.......|  ..+++++++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~~~~p--~~~s~~~~d  232 (320)
T d1xjda_         160 TNTFCGTPDYIAPEILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----FHSIRMDNPFYP--RWLEKEAKD  232 (320)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCC--TTSCHHHHH
T ss_pred             ccccCCCCCcCCHHHHcCCCCC-chhhhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCC--ccCCHHHHH
Confidence            3345799999999999998886 569999999999999999999987654332    333333333333  468999999


Q ss_pred             HHHHhcccCCCCCCCHH-HHhcCcccCC
Q 024572          150 LLSRIFVANPSRRITIK-EIKSHPWFLK  176 (265)
Q Consensus       150 li~~~L~~dP~~R~s~~-ell~h~~f~~  176 (265)
                      ||.+||..||.+|||+. ++++||||++
T Consensus       233 li~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         233 LLVKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence            99999999999999995 8999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=272.80  Aligned_cols=175  Identities=24%  Similarity=0.357  Sum_probs=138.1

Q ss_pred             CcccccchHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC-C
Q 024572            1 MQLGVSSLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH-S   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~-~   68 (265)
                      ||++.+++.+++..+.           ++.|++.+|.|||++|||||||||+|||++.++.  +||+|||+|+..... .
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~--~kl~DFG~a~~~~~~~~  157 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVR  157 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECSTTHHHHHCCCSB
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCc--ceeccCCcceeccCCcc
Confidence            7888888777765442           3778999999999999999999999999987765  999999999754432 3


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-------------  135 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------  135 (265)
                      ......||+.|+|||++....+.+.++||||+||++|+|++|+.||.+.+....+............             
T Consensus       158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T d1gz8a_         158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK  237 (298)
T ss_dssp             CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccc
Confidence            3345579999999999988887778899999999999999999999887655554444432211110             


Q ss_pred             -cCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          136 -KIPD---------YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       136 -~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                       ..+.         ...+++++++||.+||..||.+|||+.++++||||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence             0000         12467899999999999999999999999999999753

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-41  Score=282.83  Aligned_cols=173  Identities=24%  Similarity=0.422  Sum_probs=142.3

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||||.+ +|.+++..++          ++.+|+.|+.|||++||+||||||+|||++.++...+||+|||+++.......
T Consensus        80 mE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence            899986 9999987654          26789999999999999999999999999876666799999999986655444


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC--CCCCCCHHH
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP--DYVHISQDC  147 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  147 (265)
                      .....+++.|+|||.+.+..+. .++|||||||++|+|++|+.||.+......    +..+......++  .+..+++++
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~-~~~DiWSlGvily~ll~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~  234 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVS-TATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAEYTFDEEAFKEISIEA  234 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEEC-HHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCCCHHHHTTSCHHH
T ss_pred             ccccccccccccchhccCCCCC-chhhcccHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCChhhccCCCHHH
Confidence            4556799999999999888775 569999999999999999999988654333    333333343333  234689999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ++||.+||..||.+|||+.++++||||++..
T Consensus       235 ~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  265 (321)
T d1tkia_         235 MDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence            9999999999999999999999999997653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=269.31  Aligned_cols=169  Identities=20%  Similarity=0.256  Sum_probs=128.8

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      |||+.+ +|.+++....          ++.+++.|+.|||++|||||||||+|||++.++.  +||+|||+|+...... 
T Consensus        82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~--~Kl~DFGla~~~~~~~~  159 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSG  159 (276)
T ss_dssp             EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSS--EEECCCCCSCC------
T ss_pred             EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCC--EEEccccceeeccccCC
Confidence            789875 9999997543          2678899999999999999999999999998776  9999999997543222 


Q ss_pred             --CCCCCcCCCCCcccccccCCc--CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 --RPKSTVGTPAYIAPEVLSRRE--YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~--~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                        ......||+.|+|||++.+..  ..+.++|||||||++|+|+||+.||.+..........+.+.............++
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  239 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP  239 (276)
T ss_dssp             ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCC
T ss_pred             cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccch
Confidence              223457999999999997532  2356699999999999999999999887665544444332111111112234688


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+.+||.+||..||.+|||+.+++++
T Consensus       240 ~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         240 KAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999999999976

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-39  Score=276.21  Aligned_cols=175  Identities=26%  Similarity=0.326  Sum_probs=138.2

Q ss_pred             CcccccchHHHHHH-------------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVML-------------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~-------------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+|++++.+++..             +.+++|++.||.|||++||+||||||+|||++.++. .+||+|||+++.....
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~-~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTC-CEEECCCTTCEECCTT
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCC-ceeEecccchhhccCC
Confidence            78998876655532             234778999999999999999999999999987652 4999999999876666


Q ss_pred             CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------c
Q 024572           68 SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------Q  134 (265)
Q Consensus        68 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------~  134 (265)
                      ......+|++.|+|||.+.+....+.++||||+||++|+|++|+.||........+..+.......             .
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~  256 (350)
T d1q5ka_         177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE  256 (350)
T ss_dssp             SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---C
T ss_pred             cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhh
Confidence            666677899999999998876555677999999999999999999998876655544443321100             0


Q ss_pred             ccCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          135 YKIP----------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       135 ~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                      ...+          ....+++++++||.+||.+||.+|||+.|+|+||||+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             CCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             ccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            0011          12347899999999999999999999999999999974

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-39  Score=273.10  Aligned_cols=173  Identities=25%  Similarity=0.305  Sum_probs=137.5

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      ||+++.+|..+.....        +++|++.||.|||++||+||||||+|||++.++.  +||+|||+|+...  .....
T Consensus       102 ~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~--~kl~Dfg~a~~~~--~~~~~  177 (346)
T d1cm8a_         102 MPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQAD--SEMTG  177 (346)
T ss_dssp             EECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECC--SSCCS
T ss_pred             EecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccc--cccccccceeccC--Ccccc
Confidence            7899888888776443        3888999999999999999999999999998876  9999999998543  33455


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh-------------------
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV-------------------  133 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  133 (265)
                      ..+|+.|+|||++.+..+.+.++||||+||++|+|++|+.||.+......+..........                   
T Consensus       178 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (346)
T d1cm8a_         178 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG  257 (346)
T ss_dssp             SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHH
T ss_pred             ccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhcc
Confidence            6799999999999876666677999999999999999999998876544433332211000                   


Q ss_pred             --ccc----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          134 --QYK----IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       134 --~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                        ...    ......+++.+++||.+||..||.+|||+.++|+||||+..
T Consensus       258 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         258 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             SCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             CCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence              000    00123578999999999999999999999999999999753

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=272.13  Aligned_cols=177  Identities=24%  Similarity=0.328  Sum_probs=137.5

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC----C
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH----S   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~----~   68 (265)
                      |++++++|.+++..+.        ++.|++.||.|||++|||||||||+|||++.++.  +||+|||+++.....    .
T Consensus        90 ~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~--~kl~DfG~a~~~~~~~~~~~  167 (345)
T d1pmea_          90 THLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTG  167 (345)
T ss_dssp             EECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCGGGCBCC
T ss_pred             EeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCC--EEEcccCceeeccCCCccce
Confidence            5778889999987654        4888999999999999999999999999987775  999999998754332    2


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh---------------
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV---------------  133 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------  133 (265)
                      .....+||+.|+|||++......+.++||||+||++|+|++|+.||.+.................               
T Consensus       168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T d1pmea_         168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN  247 (345)
T ss_dssp             TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred             eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhc
Confidence            23445799999999999776666777999999999999999999998765444333322211000               


Q ss_pred             -cccCC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          134 -QYKIP---------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       134 -~~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                       ....+         ....+++.+++||.+||..||.+|||+.++|+||||+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             ccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence             00011         12357889999999999999999999999999999986543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.2e-38  Score=265.23  Aligned_cols=174  Identities=21%  Similarity=0.306  Sum_probs=131.2

Q ss_pred             CcccccchHHHHHHh----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-C
Q 024572            1 MQLGVSSLSEFVMLE----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-R   69 (265)
Q Consensus         1 me~~~~sL~~~~~~~----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-~   69 (265)
                      ||++.+.+...+..+          .++++++.+|.|||++|||||||||+|||++.++.  +||+|||.|....... .
T Consensus        79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~--~kl~DfG~a~~~~~~~~~  156 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE--LKIADFGLARAFGIPVRK  156 (286)
T ss_dssp             EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCTTHHHHHCC----
T ss_pred             EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCC--EEecccccceecccCccc
Confidence            566777555555432          24778999999999999999999999999988776  9999999987543322 2


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc-------cC-----
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY-------KI-----  137 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~-----  137 (265)
                      .....+++.|+|||.+.+..+.+.++|||||||++|+|++|+.||.+....+.+.+..........       ..     
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (286)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccc
Confidence            334468999999999988777677899999999999999999999887655554444332211100       00     


Q ss_pred             -----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCC
Q 024572          138 -----------PDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK  176 (265)
Q Consensus       138 -----------~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~  176 (265)
                                 .....+++.+++||++||.+||++|||+.|+++||||++
T Consensus       237 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                       012346889999999999999999999999999999974

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-39  Score=273.18  Aligned_cols=164  Identities=21%  Similarity=0.317  Sum_probs=134.5

Q ss_pred             Cccccc-chHHHHHHhc--------------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcC
Q 024572            1 MQLGVS-SLSEFVMLEG--------------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDG   47 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~   47 (265)
                      ||+|.+ +|.+++..+.                                ++.+++.|+.|||++|||||||||+|||++.
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~  199 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  199 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccccc
Confidence            788876 9999986542                                4678999999999999999999999999998


Q ss_pred             CCCCcEEEeccCCcccCCCCCCC---CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHH
Q 024572           48 SPAPRLKICDFGYSKSSLLHSRP---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNF  123 (265)
Q Consensus        48 ~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~  123 (265)
                      ++.  +||+|||+|+........   ....||+.|+|||++.+..++ .++|||||||++|+|+| |+.||.+......+
T Consensus       200 ~~~--~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~  276 (325)
T d1rjba_         200 GKV--VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT-IKSDVWSYGILLWEIFSLGVNPYPGIPVDANF  276 (325)
T ss_dssp             TTE--EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             CCe--EEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCC-cceeccchhHHHHHHHhCCCCCCCCCCHHHHH
Confidence            775  999999999755443322   234579999999999887775 56999999999999997 89999887665544


Q ss_pred             HHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          124 RKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.+    ....+.+.+..+++++++||.+||..||++|||+.+|++|
T Consensus       277 ~~~~----~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         277 YKLI----QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHH----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHH----hcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4433    3344555566799999999999999999999999999976

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.8e-38  Score=267.95  Aligned_cols=176  Identities=19%  Similarity=0.277  Sum_probs=135.6

Q ss_pred             Cccccc-chHHHH------HHhccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVS-SLSEFV------MLEGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~-sL~~~~------~~~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.+ +|..+.      ..+.+++|++.||.|||++|||||||||+|||++.++. .+||+|||+|+...........
T Consensus       111 ~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~-~vkl~DFG~a~~~~~~~~~~~~  189 (328)
T d3bqca1         111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVR  189 (328)
T ss_dssp             EECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT-EEEECCGGGCEECCTTCCCCSC
T ss_pred             EeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCC-eeeecccccceeccCCCccccc
Confidence            567665 555532      23446889999999999999999999999999986543 4899999999876666666677


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhh----------c---------
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAV----------Q---------  134 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------~---------  134 (265)
                      ++|+.|+|||.+.+....+.++||||+||++|+|++|+.||............+......          .         
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  269 (328)
T d3bqca1         190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND  269 (328)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGG
T ss_pred             ccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccch
Confidence            899999999999887655677999999999999999999998766543322222211100          0         


Q ss_pred             -------------ccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          135 -------------YKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       135 -------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                   ...+....+++++++||++||.+||.+|||++++|+||||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         270 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             TCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             hcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence                         0011122468899999999999999999999999999999753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-38  Score=266.03  Aligned_cols=175  Identities=19%  Similarity=0.307  Sum_probs=130.2

Q ss_pred             CcccccchHHHHHH----------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVSSLSEFVML----------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~sL~~~~~~----------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||+++..+......          +.+++|++.++.|||++||+||||||+|||++.++.  +||+|||+++.....   
T Consensus        96 ~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~--~kl~dfg~~~~~~~~~~~  173 (318)
T d3blha1          96 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNS  173 (318)
T ss_dssp             EECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCC----
T ss_pred             EeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCc--EEeeecceeeeccccccc
Confidence            56676655544332          234788999999999999999999999999998876  999999999644321   


Q ss_pred             --CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC-CC----
Q 024572           68 --SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-DY----  140 (265)
Q Consensus        68 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~----  140 (265)
                        ......+||+.|+|||++.+....+.++||||+||++|+|++|+.||.+.........+............ ..    
T Consensus       174 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  253 (318)
T d3blha1         174 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYE  253 (318)
T ss_dssp             -CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-
T ss_pred             ccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhh
Confidence              22334579999999999987655566799999999999999999999876554443333322211110000 00    


Q ss_pred             ---------------------CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCC
Q 024572          141 ---------------------VHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN  177 (265)
Q Consensus       141 ---------------------~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~  177 (265)
                                           ...++.+++||.+||.+||++|||+.++|+||||+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         254 LYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             ------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             hhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence                                 0136778899999999999999999999999999753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-39  Score=274.50  Aligned_cols=174  Identities=22%  Similarity=0.316  Sum_probs=134.0

Q ss_pred             CcccccchHHHHHHhc--------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVMLEG--------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKS   72 (265)
Q Consensus         1 me~~~~sL~~~~~~~~--------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~   72 (265)
                      |++++++|.+++..+.        +++|++.||.|||++||+||||||+|||++.++.  +|++|||++....  .....
T Consensus       102 ~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~--~kl~dfg~a~~~~--~~~~~  177 (348)
T d2gfsa1         102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTD--DEMTG  177 (348)
T ss_dssp             EECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCC----CCT--GGGSS
T ss_pred             EeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc--ccccccchhcccC--ccccc
Confidence            4667779999886443        4888999999999999999999999999988876  9999999986432  23345


Q ss_pred             CcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhc------------------
Q 024572           73 TVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQ------------------  134 (265)
Q Consensus        73 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------------  134 (265)
                      ..|++.|+|||++.+..+.+.++|||||||++|+|++|+.||.+.+.......+........                  
T Consensus       178 ~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (348)
T d2gfsa1         178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS  257 (348)
T ss_dssp             SCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTT
T ss_pred             ccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhh
Confidence            67899999999988877666779999999999999999999988765544444333211100                  


Q ss_pred             -ccCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          135 -YKIP------DYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       135 -~~~~------~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                       ...+      ....+++.+++||.+||..||.+|||+.|+|+||||++..
T Consensus       258 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             cccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence             0001      0235789999999999999999999999999999998643

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-38  Score=264.05  Aligned_cols=164  Identities=23%  Similarity=0.335  Sum_probs=126.5

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||+|.+ +|.+++..+.                         ++.|++.|+.|||++|||||||||+|||++.++.  +|
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~--~K  174 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV--VK  174 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC--EE
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCc--EE
Confidence            788875 9999986532                         3668999999999999999999999999988776  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVG-AYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+|+......   ......||+.|+|||++.+..++ .++|||||||++|+|++| .+||.+......+...+.. 
T Consensus       175 l~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~-~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~-  252 (299)
T d1ywna1         175 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-  252 (299)
T ss_dssp             ECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH-
T ss_pred             EccCcchhhccccccccccCceeeCccccchhHhhcCCCC-cccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-
Confidence            99999997543322   22345699999999999887775 569999999999999986 5678776655444443332 


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                         ....+.+..+++++++||.+||..||.+|||+.++++|
T Consensus       253 ---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         253 ---GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               23344445789999999999999999999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-38  Score=264.68  Aligned_cols=172  Identities=28%  Similarity=0.417  Sum_probs=138.7

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC--C
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--S   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~--~   68 (265)
                      ||++.+ +|.+++...+         .++|++.++.|||++||+||||||+|||++.++.  +||+|||+++.....  .
T Consensus       108 ~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~--vkL~DFG~a~~~~~~~~~  185 (322)
T d1vzoa_         108 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH--VVLTDFGLSKEFVADETE  185 (322)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEESCSSEEEECCGGGGG
T ss_pred             eecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCC--EEEeeccchhhhcccccc
Confidence            677765 8999887665         3778999999999999999999999999998775  999999999754332  2


Q ss_pred             CCCCCcCCCCCcccccccCCc-CCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRRE-YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~-~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ......|++.|+|||.+.+.. +.+.++|||||||++|+|++|+.||.+.........+.........  +.+..+++.+
T Consensus       186 ~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~--~~~~~~s~~~  263 (322)
T d1vzoa_         186 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--PYPQEMSALA  263 (322)
T ss_dssp             GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC--CCCTTSCHHH
T ss_pred             cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC--CCcccCCHHH
Confidence            234457999999999997654 3456699999999999999999999887665555555554444333  3344789999


Q ss_pred             HHHHHHhcccCCCCCC-----CHHHHhcCcccCC
Q 024572          148 RNLLSRIFVANPSRRI-----TIKEIKSHPWFLK  176 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~-----s~~ell~h~~f~~  176 (265)
                      ++||.+||.+||.+||     |++|+++||||++
T Consensus       264 ~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         264 KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            9999999999999999     5899999999975

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-38  Score=259.80  Aligned_cols=166  Identities=18%  Similarity=0.270  Sum_probs=130.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.+ +|.+++..+.         ++.+|+.||.|||++|||||||||+|||++.++.  +||+|||+++....... 
T Consensus        86 mE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~--~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          86 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY--AKISDFGLSKALRADENY  163 (277)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTTCEECCTTCSE
T ss_pred             EEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCc--ccccchhhhhhccccccc
Confidence            799976 9999988654         3667899999999999999999999999998775  99999999975433221 


Q ss_pred             ---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                         .....||+.|+|||++.+..++ .++|||||||++|+|++ |+.||.+......    ...+.. ..+.+.+..+++
T Consensus       164 ~~~~~~~~gt~~y~APE~l~~~~~~-~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~----~~~i~~-~~~~~~p~~~~~  237 (277)
T d1xbba_         164 YKAQTHGKWPVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV----TAMLEK-GERMGCPAGCPR  237 (277)
T ss_dssp             EEC----CCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH----HHHHHT-TCCCCCCTTCCH
T ss_pred             cccccccCCCceecCchhhcCCCCC-chhhhccchhhhhHHhhCCCCCCCCCCHHHH----HHHHHc-CCCCCCCcccCH
Confidence               2234688999999999887775 55999999999999998 8999987654322    222222 233445567999


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHh---cCccc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIK---SHPWF  174 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell---~h~~f  174 (265)
                      ++.+||.+||..||.+|||+.+++   +|+|+
T Consensus       238 ~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         238 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            999999999999999999999984   45544

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-37  Score=255.55  Aligned_cols=177  Identities=23%  Similarity=0.304  Sum_probs=133.2

Q ss_pred             Cccccc-chHHHHHHh---------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLE---------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR-   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~---------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~-   69 (265)
                      ||++.+ +|..++...         .+++|++.+|.|||++||+||||||+|||++.++.  +||+|||.++....... 
T Consensus        80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~--~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE--LKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSCCSC
T ss_pred             eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCc--eeeeecchhhcccCCCcc
Confidence            344444 555555433         34778999999999999999999999999987765  99999999986554332 


Q ss_pred             CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcc--------------
Q 024572           70 PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQY--------------  135 (265)
Q Consensus        70 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------  135 (265)
                      .....+++.|+|||++.+..+.+.++||||+||++|+|++|+.||....+.......+........              
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T d1unla_         158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccc
Confidence            233457889999999988776677799999999999999999997666555443333332211100              


Q ss_pred             ----------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCCC
Q 024572          136 ----------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP  179 (265)
Q Consensus       136 ----------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~~  179 (265)
                                .......+++.+++||.+||..||.+|||++|+|+||||++..+
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~  291 (292)
T d1unla_         238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSC
T ss_pred             ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCCC
Confidence                      00112346789999999999999999999999999999986543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-37  Score=256.55  Aligned_cols=168  Identities=18%  Similarity=0.230  Sum_probs=130.6

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+||||||+|||++.++.  +||+|||+|+......
T Consensus        86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~--~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS--CKIADFGLARLIEDNE  163 (272)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECSSSC
T ss_pred             EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccc--eeeccccceEEccCCc
Confidence            688866 888765433           24777899999999999999999999999998776  9999999998654332


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        ......+|+.|+|||++.+..++ .++|||||||++|+|+||..|+...........   .+. .....+.+..++++
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~~~~~-~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~---~i~-~~~~~~~p~~~~~~  238 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ---NLE-RGYRMVRPDNCPEE  238 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH---HHH-TTCCCCCCTTCCHH
T ss_pred             cccccccCCcccccChHHHhCCCCC-chhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHH---HHH-hcCCCCCcccChHH
Confidence              22345689999999999887775 569999999999999996665544444333222   222 22344445578999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc--CcccC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS--HPWFL  175 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~--h~~f~  175 (265)
                      +.+||.+||..||++|||+.++++  |+||.
T Consensus       239 l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            999999999999999999999988  67774

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.7e-37  Score=256.86  Aligned_cols=163  Identities=20%  Similarity=0.325  Sum_probs=122.0

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      |||+.+ +|.+++....          ++.+++.||.|||++||+||||||+|||++.++.  +||+|||+|+.......
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~--~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV--CKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCC-----------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCc--EEECCcccceEccCCCC
Confidence            789976 8998877642          3677899999999999999999999999998876  99999999975443222


Q ss_pred             C------CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCC
Q 024572           70 P------KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVH  142 (265)
Q Consensus        70 ~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (265)
                      .      ....+|+.|+|||++.+..++ .++|||||||++|+|+| |+.||.+......    +..+. .....+.+..
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~----~~~i~-~~~~~~~~~~  257 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDV----INAIE-QDYRLPPPMD  257 (299)
T ss_dssp             ------------CGGGSCHHHHHSCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHHHH-TTCCCCCCTT
T ss_pred             cceeeecccccCCccccCHHHHhcCCCC-cccccccchHHHHHHHhCCCCCCCCCCHHHH----HHHHH-cCCCCCCCcc
Confidence            1      123478899999999887775 55999999999999998 8999987654332    22222 2344555667


Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          143 ISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       143 ~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++..+.+||.+||..||.+|||+.+++++
T Consensus       258 ~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         258 CPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-37  Score=257.90  Aligned_cols=166  Identities=22%  Similarity=0.304  Sum_probs=131.5

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      |||+.+ +|.+++....          ++.+++.||.|||++||+||||||+|||++.++.  +||+|||+|+...... 
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~--~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY--AKISDFGLSKALGADDS  164 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE--EEECCCTTCEECTTCSC
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCc--eeeccchhhhccccccc
Confidence            799886 9999875432          3778999999999999999999999999998775  9999999997554322 


Q ss_pred             ---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           69 ---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        69 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                         ......||+.|+|||++.+..++ .++|||||||++|+|+| |+.||.+.......    ..+.. ....+.+..++
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~----~~i~~-~~~~~~p~~~~  238 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM----AFIEQ-GKRMECPPECP  238 (285)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH----HHHHT-TCCCCCCTTCC
T ss_pred             ccccccccccCccccChHHHhCCCCC-ccchhhcchHHHHHHHhCCCCCCCCCCHHHHH----HHHHc-CCCCCCCCcCC
Confidence               22334688999999999887775 55999999999999998 89999887654322    22222 22344455799


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHh---cCccc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIK---SHPWF  174 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell---~h~~f  174 (265)
                      +++.+||.+||..||++|||+.+|+   +|+|+
T Consensus       239 ~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         239 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999998884   55554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-37  Score=252.81  Aligned_cols=164  Identities=18%  Similarity=0.258  Sum_probs=119.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.||.|||+++|+||||||+|||++.++.  +||+|||+++.......
T Consensus        79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~--~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGC--EEECSCC----------
T ss_pred             EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCC--eEecccchheeccCCCc
Confidence            788865 9999887543          3677899999999999999999999999998876  99999999975543322


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                        .....||+.|+|||++.+..++ .++|||||||++|+|+|+..|+............+   .. ....+.+..+++.+
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~~~~-~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i---~~-~~~~~~p~~~~~~l  231 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI---ST-GFRLYKPRLASTHV  231 (263)
T ss_dssp             --------CTTSCCHHHHTTCCCC-HHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHH---HH-TCCCCCCTTSCHHH
T ss_pred             eeecceecCcccCChHHhcCCCCC-chhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHH---Hh-cCCCCCccccCHHH
Confidence              2234689999999999988875 56999999999999999544444433333322222   22 23344455789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+||.+||..||++|||+.++++|
T Consensus       232 ~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         232 YQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHH
Confidence            999999999999999999999976

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.3e-37  Score=255.67  Aligned_cols=163  Identities=19%  Similarity=0.243  Sum_probs=130.4

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.||.|||++||+||||||+|||++.++.  +||+|||+|+......
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~--~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDT  169 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCCCTTTCCSSS
T ss_pred             eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCc--EEEccccceeecCCCC
Confidence            788875 8999887542           2568899999999999999999999999988776  9999999998544332


Q ss_pred             CC--CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 RP--KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                      ..  ....|++.|+|||++.+..++ .++|||||||++|+|++|..||............+    ......+.+..+++.
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~~~~-~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i----~~~~~~~~~~~~~~~  244 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL----EKDYRMERPEGCPEK  244 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCS-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH----HTTCCCCCCTTCCHH
T ss_pred             ceeeccccccccccChHHHcCCCCC-chhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH----hcCCCCCCCccchHH
Confidence            21  223478899999999888775 56999999999999999877776655544433332    233445555679999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +++||.+||..||.+|||+.++++
T Consensus       245 l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         245 VYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHH
Confidence            999999999999999999999976

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-37  Score=262.79  Aligned_cols=175  Identities=25%  Similarity=0.325  Sum_probs=126.1

Q ss_pred             CcccccchHHHHHH-------hccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCCCCC
Q 024572            1 MQLGVSSLSEFVML-------EGSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKST   73 (265)
Q Consensus         1 me~~~~sL~~~~~~-------~~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~~~~   73 (265)
                      ||++.+++.+.+..       +.++++++.|+.|||++||+||||||+|||++.++.  +|++|||+++...........
T Consensus       101 ~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~--~kl~df~~~~~~~~~~~~~~~  178 (355)
T d2b1pa1         101 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPY  178 (355)
T ss_dssp             EECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCCCC-------------
T ss_pred             EeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccc--eeeechhhhhccccccccccc
Confidence            78888876665542       335888999999999999999999999999998776  999999998876666666667


Q ss_pred             cCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhh------------------hcc
Q 024572           74 VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMA------------------VQY  135 (265)
Q Consensus        74 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------------~~~  135 (265)
                      ++|+.|+|||++.+..++. ++||||+||++|+|++|+.||.+.+.......++.....                  ...
T Consensus       179 ~~t~~y~aPE~l~~~~~~~-~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (355)
T d2b1pa1         179 VVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP  257 (355)
T ss_dssp             --CCTTCCHHHHTTCCCCT-THHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSC
T ss_pred             cccccccChhhhcCCCCCC-CcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCc
Confidence            8999999999999877754 599999999999999999999877654444333322111                  000


Q ss_pred             cCC--------------C----CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          136 KIP--------------D----YVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       136 ~~~--------------~----~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                      ...              .    ....++++++||++||..||++|||++|+|+||||+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             CCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             cccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            000              0    001356789999999999999999999999999998653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.8e-37  Score=253.87  Aligned_cols=166  Identities=24%  Similarity=0.352  Sum_probs=123.5

Q ss_pred             Cccccc-chHHHHHHhc---------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---
Q 024572            1 MQLGVS-SLSEFVMLEG---------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---   67 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---   67 (265)
                      ||++.+ +|.+++..++         ++.|++.+|.|||++||+||||||+|||++.++.  ++|+|||.++.....   
T Consensus        90 mE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~--~~l~d~~~~~~~~~~~~~  167 (277)
T d1o6ya_          90 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNS  167 (277)
T ss_dssp             EECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSC--EEECCCTTCEECC-----
T ss_pred             EECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcccc--ceeehhhhhhhhcccccc
Confidence            899986 8999888765         3778999999999999999999999999988776  999999988643322   


Q ss_pred             -CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc--CCCCCCCC
Q 024572           68 -SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYK--IPDYVHIS  144 (265)
Q Consensus        68 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  144 (265)
                       ......+||+.|+|||++.+..++ .++|||||||++|+|+||++||.+......+...+    .....  ......+|
T Consensus       168 ~~~~~~~~Gt~~Y~aPE~~~~~~~~-~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~s  242 (277)
T d1o6ya_         168 VTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----REDPIPPSARHEGLS  242 (277)
T ss_dssp             -----------TTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH----HCCCCCGGGTSSSCC
T ss_pred             ccccccccCcccccCHHHHcCCCCC-cceecccchHHHHHHHhCCCCCCCcCHHHHHHHHH----hcCCCCCchhccCCC
Confidence             223345799999999999887775 55999999999999999999998765443333322    22221  12344689


Q ss_pred             HHHHHHHHHhcccCCCCCC-CHHHHhcCccc
Q 024572          145 QDCRNLLSRIFVANPSRRI-TIKEIKSHPWF  174 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~-s~~ell~h~~f  174 (265)
                      +.+.+||.+||..||.+|| |++++ .|+|.
T Consensus       243 ~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         243 ADLDAVVLKALAKNPENRYQTAAEM-RADLV  272 (277)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred             HHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence            9999999999999999999 55554 45554

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=247.44  Aligned_cols=163  Identities=20%  Similarity=0.289  Sum_probs=131.2

Q ss_pred             Ccccc-cchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGV-SSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~-~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++. ++|.+++....          ++.+++.|+.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~--~kl~DfG~a~~~~~~~~  155 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEY  155 (258)
T ss_dssp             EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCC--EEECCCSSCCBCSSSSC
T ss_pred             EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCc--EEECcchhheeccCCCc
Confidence            78886 48888876543          3567899999999999999999999999998776  99999999975443322


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        .....+|+.|+|||++.+..++ .++|||||||++|+|+| |+.||.+......    ...+.. ....+.+..+++.
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~-~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~----~~~i~~-~~~~~~p~~~~~~  229 (258)
T d1k2pa_         156 TSSVGSKFPVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSLGKMPYERFTNSET----AEHIAQ-GLRLYRPHLASEK  229 (258)
T ss_dssp             CCCCCSCCCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH----HHHHHT-TCCCCCCTTCCHH
T ss_pred             eeecccCCCCCcCCcHHhcCCCCC-cceeecccchhhHhHHhcCCCCCCCCCHHHH----HHHHHh-CCCCCCcccccHH
Confidence              2235689999999999988875 56999999999999998 8999987764332    222222 3344555678999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+||.+||..||++|||+.++++|
T Consensus       230 l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         230 VYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHHH
Confidence            9999999999999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=251.18  Aligned_cols=163  Identities=22%  Similarity=0.375  Sum_probs=121.3

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++....          ++.+++.|+.|||++||+||||||+||+++.++.  +||+|||+|+.......
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~--~Kl~DfG~a~~~~~~~~  163 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTY  163 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECC------------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCc--EEEccchhheeccCCcc
Confidence            688875 8888766543          2678899999999999999999999999998776  99999999975443222


Q ss_pred             --CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           70 --PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        70 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        .....+|+.|+|||++.+..++ .++|||||||++|+|++ |.+||...........+    .. ....+.+..+++.
T Consensus       164 ~~~~~~~gt~~y~apE~l~~~~~~-~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i----~~-~~~~~~~~~~~~~  237 (273)
T d1mp8a_         164 YKASKGKLPIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI----EN-GERLPMPPNCPPT  237 (273)
T ss_dssp             -------CCGGGCCHHHHHHCCCS-HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HT-TCCCCCCTTCCHH
T ss_pred             eeccceecCcccchhhHhccCCCC-CccccccchHHHHHHHhcCCCCCCCCCHHHHHHHH----Hc-CCCCCCCCCCCHH
Confidence              2334588999999999887775 56999999999999998 89999877654433322    22 2334555689999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+||.+||..||.+|||+.+|++|
T Consensus       238 ~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         238 LYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999999999876

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-36  Score=248.75  Aligned_cols=163  Identities=19%  Similarity=0.264  Sum_probs=121.1

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.. +|.+++....          ++.+++.++.|||+++|+||||||+||||+.++.  +||+|||+++.......
T Consensus        88 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~--~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          88 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCCCC---------
T ss_pred             EEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCe--EEEcccchhhcccCCCc
Confidence            567766 6666665432          3667899999999999999999999999998876  99999999975433221


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCH
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQ  145 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (265)
                          .....||+.|+|||++.+..++ .++|||||||++|+|++|..||............+    ....+.+.+..++.
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~-~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~~~  240 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI----NDGFRLPTPMDCPS  240 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH----HTTCCCCCCTTCBH
T ss_pred             cceEeccCCCCccccCHHHHccCCCC-CcccccccHHHHHHHHhCCCCccccCCHHHHHHHH----hccCCCCCchhhHH
Confidence                1234588999999999888775 55999999999999999766665544443333222    22344555667899


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          146 DCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       146 ~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      .+.+||.+||..||++|||+.+|++
T Consensus       241 ~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         241 AIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            9999999999999999999999976

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-36  Score=250.66  Aligned_cols=170  Identities=18%  Similarity=0.224  Sum_probs=128.3

Q ss_pred             Cccccc-chHHHHHHh-----------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLE-----------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-----------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++...           .++.+++.++.|||++||+||||||+||||+.++.  +||+|||+++......
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~--~kl~DfGla~~~~~~~  167 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNE  167 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCCTTC------
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCc--EEEcccchhhhccCCC
Confidence            677776 777776543           24777899999999999999999999999988776  9999999997543222


Q ss_pred             --CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHH
Q 024572           69 --RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQD  146 (265)
Q Consensus        69 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (265)
                        ......+|+.|+|||++.+..++ .++|||||||++|+|++|..||............+   . .....+.+..+++.
T Consensus       168 ~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i---~-~~~~~~~~~~~~~~  242 (285)
T d1fmka3         168 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---E-RGYRMPCPPECPES  242 (285)
T ss_dssp             --------CCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---H-TTCCCCCCTTSCHH
T ss_pred             ceeeccccccccccChHHHhCCCCC-cHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH---H-hcCCCCCCcccCHH
Confidence              22334689999999999887775 56999999999999999766665554443333322   2 22344555679999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhc--CcccCCC
Q 024572          147 CRNLLSRIFVANPSRRITIKEIKS--HPWFLKN  177 (265)
Q Consensus       147 ~~~li~~~L~~dP~~R~s~~ell~--h~~f~~~  177 (265)
                      +++||.+||..||++|||+.+|++  ++||...
T Consensus       243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            999999999999999999999987  8888654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-36  Score=253.02  Aligned_cols=163  Identities=19%  Similarity=0.301  Sum_probs=127.6

Q ss_pred             cccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCCC-
Q 024572            2 QLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRP-   70 (265)
Q Consensus         2 e~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~~-   70 (265)
                      ++++++|.+++..+.          ++.+++.||.|||++|||||||||+|||++.++.  +||+|||+|+........ 
T Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~--~kl~DFGla~~~~~~~~~~  168 (317)
T d1xkka_          91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKEY  168 (317)
T ss_dssp             CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE--EEECCCSHHHHTTTTCC--
T ss_pred             eccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCC--eEeeccccceecccccccc
Confidence            445568888777653          3668999999999999999999999999998775  999999999765433222 


Q ss_pred             --CCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           71 --KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        71 --~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                        ....||+.|+|||++.+..++ .++|||||||++|+|+| |..||.+..... +...+.    .....+.+..+++.+
T Consensus       169 ~~~~~~gt~~y~APE~l~~~~~~-~~sDvwS~Gvil~el~t~g~~p~~~~~~~~-~~~~i~----~~~~~~~p~~~~~~~  242 (317)
T d1xkka_         169 HAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILE----KGERLPQPPICTIDV  242 (317)
T ss_dssp             ------CCTTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTSCGGG-HHHHHH----HTCCCCCCTTBCHHH
T ss_pred             cccccccCccccChHHHhcCCCC-hhhhhhhHHHHHHHHHHCCCCCCCCCCHHH-HHHHHH----cCCCCCCCcccCHHH
Confidence              233589999999999888775 56999999999999998 788887765433 233222    233445556799999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCc
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSHP  172 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h~  172 (265)
                      .+||.+||..||.+|||+.++++|.
T Consensus       243 ~~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         243 YMIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHhCCCChhhCcCHHHHHHHH
Confidence            9999999999999999999999873

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-36  Score=246.66  Aligned_cols=163  Identities=24%  Similarity=0.325  Sum_probs=128.7

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.. +|.+++..+.          ++.+++.|+.|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~--vkl~DfGl~~~~~~~~~  166 (273)
T d1u46a_          89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDD  166 (273)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEECCC-CC
T ss_pred             eeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc--eeeccchhhhhcccCCC
Confidence            577765 7777766543          3777899999999999999999999999998775  99999999986543322


Q ss_pred             ----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 ----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                          .....++..|+|||++.+..++ .++|||||||++|+|+| |+.||.+.....    .+..+.......+.+..++
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~~~~~-~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~  241 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCP  241 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCC
T ss_pred             cceecCccccCcccCCHHHHhCCCCC-cchhhhhhHHHHHHHHhCCCCCCCCcCHHH----HHHHHHhCCCCCCCccccc
Confidence                1233578899999999987764 55999999999999998 899998765433    3344444555566667899


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      +.+.+||.+||..||++|||+.+|++
T Consensus       242 ~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         242 QDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-35  Score=245.71  Aligned_cols=162  Identities=22%  Similarity=0.335  Sum_probs=129.8

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         ++++++.|+.|||++|||||||||+|||++.++.  +|
T Consensus        98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~--~k  175 (299)
T d1fgka_          98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MK  175 (299)
T ss_dssp             ECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--EE
T ss_pred             EEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCC--eE
Confidence            788876 8999987542                         3667899999999999999999999999998876  99


Q ss_pred             EeccCCcccCCCCC---CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHH
Q 024572           55 ICDFGYSKSSLLHS---RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRI  130 (265)
Q Consensus        55 l~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~  130 (265)
                      |+|||+++......   ......+++.|+|||.+.+..++ .++|||||||++|+|++ |.+||.+..... ...   .+
T Consensus       176 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~-~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~-~~~---~i  250 (299)
T d1fgka_         176 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFK---LL  250 (299)
T ss_dssp             ECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHH---HH
T ss_pred             eccchhhccccccccccccccCCCChhhhhhhHhcCCCCC-chhhhHHhHHHHHHhccCCCCCCCCCCHHH-HHH---HH
Confidence            99999997554332   22335688999999999887775 55999999999999998 688887655432 222   22


Q ss_pred             hhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          131 MAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                       ......+.+..+++.+++||.+||+.||.+|||+.+|++
T Consensus       251 -~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         251 -KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             -HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -HcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence             223444555678999999999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-35  Score=248.06  Aligned_cols=163  Identities=20%  Similarity=0.278  Sum_probs=129.2

Q ss_pred             Cccccc-chHHHHHHhc-------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEE
Q 024572            1 MQLGVS-SLSEFVMLEG-------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLK   54 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vk   54 (265)
                      ||++.+ +|.+++..+.                         .+.+|+.|+.|||++||+||||||+|||++.++.  +|
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~--~k  167 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--AK  167 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC--EE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCc--eE
Confidence            688885 9999987542                         3678999999999999999999999999988776  99


Q ss_pred             EeccCCcccCCCCCCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCC-CCCCCCCChHHHHHHHHHHhhh
Q 024572           55 ICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA-YPFEDQEDPKNFRKTISRIMAV  133 (265)
Q Consensus        55 l~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~  133 (265)
                      |+|||+++............+|..|+|||.+.+..++ .++|||||||++|+|++|. +||.+....    .....+.. 
T Consensus       168 l~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~sDvwSfGvil~ell~~~~~p~~~~~~~----~~~~~i~~-  241 (309)
T d1fvra_         168 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEKLPQ-  241 (309)
T ss_dssp             ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEEC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHGGG-
T ss_pred             EccccccccccccccccceecCCcccchHHhccCCCC-ccceeehhHHHHHHHHhcCCCCCCCCCHH----HHHHHHHh-
Confidence            9999999866555555556799999999999888875 5599999999999999976 466554432    22333322 


Q ss_pred             cccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          134 QYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       134 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ....+.+..+++++++||.+||..||++|||+.+|++|
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            23445556799999999999999999999999999976

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.3e-35  Score=245.81  Aligned_cols=173  Identities=17%  Similarity=0.126  Sum_probs=126.8

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCC-CCcEEEeccCCcccCCCCC-
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSLLHS-   68 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~-~~~vkl~Dfg~a~~~~~~~-   68 (265)
                      ||+++++|.+.+....          ++.+++.+|.|||++||+||||||+|||++..+ ...+||+|||+|+...... 
T Consensus        82 me~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          82 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             EEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            7999999888776543          366789999999999999999999999985422 2359999999997543322 


Q ss_pred             -------CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC---
Q 024572           69 -------RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP---  138 (265)
Q Consensus        69 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---  138 (265)
                             ......||+.|+|||++.+..++ .++|||||||++|+|++|+.||............... .......+   
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~  239 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQS-RRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI-SEKKMSTPIEV  239 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCC-HHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHH-HHHHHHSCHHH
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCC-ChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHh-hcccCCCChhH
Confidence                   22345799999999999987775 5699999999999999999999876544332222111 11111111   


Q ss_pred             CCCCCCHHHHHHHHHhcccCCCCCCCHHHH---hcCcccC
Q 024572          139 DYVHISQDCRNLLSRIFVANPSRRITIKEI---KSHPWFL  175 (265)
Q Consensus       139 ~~~~~~~~~~~li~~~L~~dP~~R~s~~el---l~h~~f~  175 (265)
                      ....+|+++.+||.+||..+|.+||++.++   |+|+|.+
T Consensus       240 ~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            123688999999999999999999998754   5666543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-35  Score=245.75  Aligned_cols=146  Identities=19%  Similarity=0.264  Sum_probs=114.7

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCC---CCCCCCcCCCCCcccccccCCcCCCc
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH---SRPKSTVGTPAYIAPEVLSRREYDGK   93 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~   93 (265)
                      ++.+++.++.|||+++||||||||+|||++.++.  +||+|||+|+.....   .......+++.|+|||++.+..++ .
T Consensus       145 i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~--~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t-~  221 (301)
T d1lufa_         145 IARQVAAGMAYLSERKFVHRDLATRNCLVGENMV--VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT-T  221 (301)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCC-H
T ss_pred             HHHHHHHHhhhcccCCeEeeEEcccceEECCCCc--EEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCC-h
Confidence            4778899999999999999999999999998776  999999998743322   222345688999999999988876 5


Q ss_pred             hHhHHHHHHHHHHHHhCC-CCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572           94 LADVWSCGVTLYVMLVGA-YPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus        94 ~~DiwslG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                      ++|||||||++|+|++|. +||.+....+.    +..+.... ..+.+..+++++.+||.+||..+|.+|||+.+|++
T Consensus       222 ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~----~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         222 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEV----IYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCHHHH----HHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhccchhhHHHHHccCCCCCCCCCHHHH----HHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            699999999999999986 56766544332    22223222 33445578999999999999999999999999965

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-34  Score=238.00  Aligned_cols=161  Identities=18%  Similarity=0.288  Sum_probs=123.2

Q ss_pred             Cccccc-chHHHHHHhc-----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG-----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHS   68 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~-----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~   68 (265)
                      ||++.+ +|.+++..+.           ++.+++.|+.|||+++|+||||||+|||++.++.  +||+|||+++....  
T Consensus        80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~--~kl~dfg~s~~~~~--  155 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASS--  155 (262)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC--EEECCCCC--------
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCC--EeecccccceecCC--
Confidence            688866 9999987543           3677899999999999999999999999998876  99999999975432  


Q ss_pred             CCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 024572           69 RPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDC  147 (265)
Q Consensus        69 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ......++..|+|||++.+..++ .++|||||||++|+|+| |++||......... ..+   . .....+.+..+++.+
T Consensus       156 ~~~~~~~~~~y~aPE~l~~~~~t-~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~-~~i---~-~~~~~~~~~~~~~~~  229 (262)
T d1byga_         156 TQDTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-PRV---E-KGYKMDAPDGCPPAV  229 (262)
T ss_dssp             ------CCTTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-HHH---T-TTCCCCCCTTCCHHH
T ss_pred             CCccccccccCCChHHHhCCCCC-hHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHH-HHH---H-cCCCCCCCccCCHHH
Confidence            33345688999999999887764 56999999999999998 68888765443322 222   2 223444555789999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcC
Q 024572          148 RNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       148 ~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      ++||.+||..||.+|||+.+++++
T Consensus       230 ~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         230 YEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHH
Confidence            999999999999999999999874

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=243.64  Aligned_cols=164  Identities=18%  Similarity=0.227  Sum_probs=126.2

Q ss_pred             Cccccc-chHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccCCCCCC
Q 024572            1 MQLGVS-SLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSR   69 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~~~~~~   69 (265)
                      ||++.+ +|.+++..+.          ++.+++.|+.|||+++|+||||||+|||++.++.  +||+|||+++.......
T Consensus       108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~--~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEF  185 (311)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--EEECSSGGGCCTTTTTC
T ss_pred             EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCC--EEEecccchhhcccccc
Confidence            688886 8888777443          3667899999999999999999999999988776  99999999975443322


Q ss_pred             -----CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCCCCCCCC
Q 024572           70 -----PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHIS  144 (265)
Q Consensus        70 -----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (265)
                           .....||+.|+|||.+.+..++ .++|||||||++|+|++|+.||...........   .+... ...+.+..++
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~---~i~~g-~~~~~p~~~~  260 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV---YLLQG-RRLLQPEYCP  260 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSCC------CHH---HHHTT-CCCCCCTTCC
T ss_pred             ccceecccccccccccChHHHhcCCCC-ChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHH---HHHcC-CCCCCcccCc
Confidence                 1224588999999999887774 559999999999999998888766543322222   22222 2334445789


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          145 QDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       145 ~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      +.+.+||.+||..||++|||+.+|++|
T Consensus       261 ~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         261 DPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999999999976

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=242.24  Aligned_cols=163  Identities=24%  Similarity=0.343  Sum_probs=130.2

Q ss_pred             Cccccc-chHHHHHHhc---------------------------cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCc
Q 024572            1 MQLGVS-SLSEFVMLEG---------------------------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPR   52 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~---------------------------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~   52 (265)
                      ||+|.+ +|.+++....                           ++.|++.++.|||++|||||||||+||+++.++.  
T Consensus       106 mE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~--  183 (311)
T d1t46a_         106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI--  183 (311)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTE--
T ss_pred             EEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCc--
Confidence            788876 8999886543                           4788999999999999999999999999988765  


Q ss_pred             EEEeccCCcccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHH
Q 024572           53 LKICDFGYSKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLV-GAYPFEDQEDPKNFRKTIS  128 (265)
Q Consensus        53 vkl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~-g~~pf~~~~~~~~~~~~~~  128 (265)
                      +||+|||+++.......   .....+|+.|+|||++.+..++ .++|||||||++|+|+| |.+||........+.+.+.
T Consensus       184 ~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~  262 (311)
T d1t46a_         184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (311)
T ss_dssp             EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             ccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCC-CcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            99999999986543322   2334689999999999877764 56999999999999999 5666666555444444433


Q ss_pred             HHhhhcccCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          129 RIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                          ...+...+..+++.+.+||.+||..||.+|||+.+|++
T Consensus       263 ----~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         263 ----EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ----HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----cCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                33444445578999999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-34  Score=242.79  Aligned_cols=163  Identities=21%  Similarity=0.262  Sum_probs=127.8

Q ss_pred             Cccccc-chHHHHHHh-------------------ccccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCC
Q 024572            1 MQLGVS-SLSEFVMLE-------------------GSVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGY   60 (265)
Q Consensus         1 me~~~~-sL~~~~~~~-------------------~~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~   60 (265)
                      ||++.. +|.+++...                   ..+.+++.|+.|||+++|+||||||+|||++.++.  +||+|||+
T Consensus       102 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~--~Kl~DFGl  179 (308)
T d1p4oa_         102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT--VKIGDFGM  179 (308)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC--EEECCTTC
T ss_pred             EeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCce--EEEeeccc
Confidence            677765 899988743                   24677899999999999999999999999998776  99999999


Q ss_pred             cccCCCCCC---CCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCC-CCCCCCCChHHHHHHHHHHhhhccc
Q 024572           61 SKSSLLHSR---PKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGA-YPFEDQEDPKNFRKTISRIMAVQYK  136 (265)
Q Consensus        61 a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~  136 (265)
                      |+.......   .....+|+.|+|||.+.+..++ .++|||||||++|+|+||. .||.+......    +..+... ..
T Consensus       180 a~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~-~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~----~~~i~~~-~~  253 (308)
T d1p4oa_         180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----LRFVMEG-GL  253 (308)
T ss_dssp             CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH----HHHHHTT-CC
T ss_pred             ceeccCCcceeeccceecccccCCHHHHccCCCC-cccccccHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHhC-CC
Confidence            975433222   2334689999999999887775 5599999999999999985 67766544332    2222222 23


Q ss_pred             CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          137 IPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       137 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .+.+..+++.+.+||.+||+.+|++|||+.+|+++
T Consensus       254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~  288 (308)
T d1p4oa_         254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  288 (308)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            44455789999999999999999999999999873

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.2e-33  Score=235.50  Aligned_cols=168  Identities=20%  Similarity=0.205  Sum_probs=127.0

Q ss_pred             CcccccchHHHHHHhc----------cccchHHHHHhhhhcCceecCCCcCcEEEcCC---CCCcEEEeccCCcccCCCC
Q 024572            1 MQLGVSSLSEFVMLEG----------SVKMKPDIFFSSLSQQICHRDLKLENTLLDGS---PAPRLKICDFGYSKSSLLH   67 (265)
Q Consensus         1 me~~~~sL~~~~~~~~----------~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~---~~~~vkl~Dfg~a~~~~~~   67 (265)
                      ||+++++|.+++...+          ++.+++.++.|||++||+||||||+|||++..   ..+.+||+|||+|+.....
T Consensus        80 me~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~  159 (293)
T d1csna_          80 IDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  159 (293)
T ss_dssp             EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             EEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence            7999999999987654          26678899999999999999999999999642   2345999999999754322


Q ss_pred             --------CCCCCCcCCCCCcccccccCCcCCCchHhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhcccCC-
Q 024572           68 --------SRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIP-  138 (265)
Q Consensus        68 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-  138 (265)
                              ......+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+......... ...+.......+ 
T Consensus       160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~-~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~-~~~i~~~~~~~~~  237 (293)
T d1csna_         160 VTKQHIPYREKKNLSGTARYMSINTHLGREQS-RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK-YERIGEKKQSTPL  237 (293)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH-HHHHHHHHHHSCH
T ss_pred             ccccceeecccCceEEchhhcCHHHhcCCCCC-hHHHHHHhhHHHHHHHhCCCcCCCccchhHHHH-HHHHHhccCCCCh
Confidence                    122345799999999999987775 559999999999999999999986554332211 111111111111 


Q ss_pred             --CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 024572          139 --DYVHISQDCRNLLSRIFVANPSRRITIKEIKS  170 (265)
Q Consensus       139 --~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~  170 (265)
                        ....+++++.+++..|+..+|++||+++.+.+
T Consensus       238 ~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence              12357899999999999999999999877643

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=2.7e-33  Score=239.92  Aligned_cols=161  Identities=22%  Similarity=0.327  Sum_probs=116.5

Q ss_pred             hccccchHHHHHhhhh-cCceecCCCcCcEEEcCCCC----CcEEEeccCCcccCCCCCCCCCCcCCCCCcccccccCCc
Q 024572           15 EGSVKMKPDIFFSSLS-QQICHRDLKLENTLLDGSPA----PRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRRE   89 (265)
Q Consensus        15 ~~~~~~i~~~l~~lH~-~~ivH~dlkp~NIll~~~~~----~~vkl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~   89 (265)
                      +.++.+++.++.|||+ +||+||||||+|||++..+.    ..++++|||.+....  ......+||+.|+|||++.+..
T Consensus       128 ~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~--~~~~~~~gt~~y~aPE~~~~~~  205 (362)
T d1q8ya_         128 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAP  205 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETT--BCCCSCCSCGGGCCHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccc--cccccccccccccChhhccccC
Confidence            4467889999999998 99999999999999975443    248999999987443  2335567999999999999888


Q ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCChH------HHHHHHHHHhh-------------hcc---------------
Q 024572           90 YDGKLADVWSCGVTLYVMLVGAYPFEDQEDPK------NFRKTISRIMA-------------VQY---------------  135 (265)
Q Consensus        90 ~~~~~~DiwslG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~-------------~~~---------------  135 (265)
                      ++ .++|+||+||++++|++|+.||.......      .....+..+..             ..+               
T Consensus       206 ~~-~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (362)
T d1q8ya_         206 WG-CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW  284 (362)
T ss_dssp             CC-THHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred             CC-ccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCC
Confidence            76 45999999999999999999997543211      11111110000             000               


Q ss_pred             --------cCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccCCCC
Q 024572          136 --------KIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL  178 (265)
Q Consensus       136 --------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ell~h~~f~~~~  178 (265)
                              ........++.+++||.+||.+||.+|||+.|+|+||||+...
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         285 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             chhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                    0000112357789999999999999999999999999998543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-33  Score=234.10  Aligned_cols=169  Identities=21%  Similarity=0.197  Sum_probs=119.6

Q ss_pred             Cccccc-chHHHHHHhc--------cccchHHHHHhhhh--------cCceecCCCcCcEEEcCCCCCcEEEeccCCccc
Q 024572            1 MQLGVS-SLSEFVMLEG--------SVKMKPDIFFSSLS--------QQICHRDLKLENTLLDGSPAPRLKICDFGYSKS   63 (265)
Q Consensus         1 me~~~~-sL~~~~~~~~--------~~~~i~~~l~~lH~--------~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~   63 (265)
                      |||+.. +|.+++....        +..+++.++.|+|+        +|||||||||+||||+.++.  +||+|||+++.
T Consensus        80 ~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~--~Kl~DFGl~~~  157 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSC--EEECCCTTCEE
T ss_pred             EecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCC--eEEEecCcccc
Confidence            788866 9999998654        35667889999996        69999999999999988775  99999999875


Q ss_pred             CCCCC-----CCCCCcCCCCCcccccccCCcC-----CCchHhHHHHHHHHHHHHhCCCCCCCCCCh-----------HH
Q 024572           64 SLLHS-----RPKSTVGTPAYIAPEVLSRREY-----DGKLADVWSCGVTLYVMLVGAYPFEDQEDP-----------KN  122 (265)
Q Consensus        64 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~-----~~~~~DiwslG~~l~~ll~g~~pf~~~~~~-----------~~  122 (265)
                      .....     ......||+.|+|||++.+...     .+.++|||||||++|+|+||..||......           ..
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~  237 (303)
T d1vjya_         158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccch
Confidence            43322     2234579999999999876432     234689999999999999998877432211           11


Q ss_pred             HHHHHHHHhhhcccCCCCC-----CCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 024572          123 FRKTISRIMAVQYKIPDYV-----HISQDCRNLLSRIFVANPSRRITIKEIKSH  171 (265)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~L~~dP~~R~s~~ell~h  171 (265)
                      .............+.+.+.     .....+.+|+.+||..||.+|||+.+|+++
T Consensus       238 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            1122222222222111111     122458899999999999999999999763

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.41  E-value=1.2e-14  Score=112.17  Aligned_cols=45  Identities=24%  Similarity=0.212  Sum_probs=40.0

Q ss_pred             cccchHHHHHhhhhcCceecCCCcCcEEEcCCCCCcEEEeccCCcccC
Q 024572           17 SVKMKPDIFFSSLSQQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS   64 (265)
Q Consensus        17 ~~~~i~~~l~~lH~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~~~   64 (265)
                      .+.+++.++.|||++||+||||||+|||++.++   ++|+|||.|+..
T Consensus       108 i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~---~~liDFG~a~~~  152 (191)
T d1zara2         108 VLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG---IWIIDFPQSVEV  152 (191)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE---EEECCCTTCEET
T ss_pred             HHHHHHHHHHHHhhCCEEEccCChhheeeeCCC---EEEEECCCcccC
Confidence            567899999999999999999999999998654   899999998643

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.65  E-value=0.0016  Score=52.21  Aligned_cols=31  Identities=23%  Similarity=0.344  Sum_probs=26.1

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..|+||+|+.++||+++++..  .-|+||+.|.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v--~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDEL--SGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEE--EEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccc--eeEecccccc
Confidence            578999999999999987653  5799999663

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.63  E-value=0.014  Score=44.88  Aligned_cols=30  Identities=23%  Similarity=0.264  Sum_probs=23.8

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|+.|.||+++.++.  +-|+||+.+.
T Consensus       183 ~~l~HgD~~~~Nil~~~~~~--~~lIDwe~a~  212 (263)
T d1j7la_         183 LVFSHGDLGDSNIFVKDGKV--SGFIDLGRSG  212 (263)
T ss_dssp             EEEECSCCCTTSEEEETTEE--EEECCCTTCE
T ss_pred             cEEEEeeccCcceeecCCce--EEEeechhcc
Confidence            34899999999999986542  4699998654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.41  E-value=0.014  Score=44.59  Aligned_cols=30  Identities=20%  Similarity=0.213  Sum_probs=24.1

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|+|+.|.||+++.+..  +-|+||+.+.
T Consensus       175 ~~liHgD~~~~Nvl~~~~~~--~~iID~~~~~  204 (255)
T d1nd4a_         175 LVVTHGDACLPNIMVENGRF--SGFIDCGRLG  204 (255)
T ss_dssp             EEEECSSCCGGGEEEETTEE--EEECCCTTCE
T ss_pred             ceEEeCCCCCcceEEeCCce--EEEEEchhcc
Confidence            45899999999999986543  5799998653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=93.08  E-value=0.019  Score=45.93  Aligned_cols=29  Identities=17%  Similarity=0.153  Sum_probs=23.5

Q ss_pred             hcCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           30 SQQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        30 ~~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++||+|+.+.|||++++    ..++||+-|.
T Consensus       191 p~~liHgDlh~~NvL~~~~----~~~IDFdd~~  219 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG----PMFVDLDDAR  219 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS----EEECCCTTCC
T ss_pred             CceeecCCCCcccEEEeCC----ceEEechhcc
Confidence            3579999999999999642    4689999764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=92.64  E-value=0.029  Score=46.15  Aligned_cols=29  Identities=17%  Similarity=0.261  Sum_probs=24.9

Q ss_pred             cCceecCCCcCcEEEcCCCCCcEEEeccCCcc
Q 024572           31 QQICHRDLKLENTLLDGSPAPRLKICDFGYSK   62 (265)
Q Consensus        31 ~~ivH~dlkp~NIll~~~~~~~vkl~Dfg~a~   62 (265)
                      ..++|||+.|.|||++.+.   ++|+||.+|.
T Consensus       223 ~~LiHGDl~~gNIlv~~~~---~~vID~E~a~  251 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE---TKVIDPEFAF  251 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC---EEECCCTTCE
T ss_pred             cceeccCCcCCceeEcCCc---eEEechhhcc
Confidence            4699999999999998654   8999998764

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=81.57  E-value=0.3  Score=39.65  Aligned_cols=16  Identities=44%  Similarity=0.748  Sum_probs=13.4

Q ss_pred             ceecCCCcCcEEEcCC
Q 024572           33 ICHRDLKLENTLLDGS   48 (265)
Q Consensus        33 ivH~dlkp~NIll~~~   48 (265)
                      ++|+|+.+.||++...
T Consensus       220 ~CHnDL~~~NiL~~~~  235 (395)
T d1nw1a_         220 FCHNDLQEGNILLPKA  235 (395)
T ss_dssp             EECSCCCGGGEEEEC-
T ss_pred             EEecCCCcccEeeccc
Confidence            6899999999999653