BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024573
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic
OS=Arabidopsis thaliana GN=PAP13 PE=1 SV=2
Length = 299
Score = 338 bits (868), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/256 (66%), Positives = 194/256 (75%), Gaps = 1/256 (0%)
Query: 1 MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
MA + S+P SA+ F S+S + + RRR+ +AMVQ+ VQG+P
Sbjct: 1 MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59
Query: 61 AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct: 60 LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119
Query: 121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
SP EGRWNFEWFGSGSPG AR IFERFP TLANLS M+++IKD A TAN KLLNS
Sbjct: 120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179
Query: 181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
IESK S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A QA TT+QQLPA I
Sbjct: 180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239
Query: 241 RDAISGGLRIPLSKCF 256
+D ++ GLRIPLS F
Sbjct: 240 KDTLASGLRIPLSGSF 255
>sp|Q9M2P7|PAP9_ARATH Probable plastid-lipid-associated protein 9, chloroplastic
OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1
Length = 308
Score = 320 bits (821), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 176/216 (81%)
Query: 44 RRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVN 103
RR+ C+AMVQ +VQG P+ YA+EMERLSAKESL+LAF DAGGFEALV GK T+MQ+IDVN
Sbjct: 48 RRMICRAMVQDSVQGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVN 107
Query: 104 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVV 163
ERIT LERLNPTPRPTTSP+LEGRW+FEWFG +PG R +FERFP TL +LSNM++
Sbjct: 108 ERITNLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIF 167
Query: 164 IKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLK 223
IKD TAN KLLNSIE+K + S+KL +EGPLR+KEEY+EG+LESPTVIEE +P+QL+
Sbjct: 168 IKDNNTKATANIKLLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLR 227
Query: 224 GAFNQAVTTVQQLPAPIRDAISGGLRIPLSKCFIIF 259
G QA TT+QQLP PI+D ++ GLRIPL + F
Sbjct: 228 GLLGQATTTLQQLPEPIKDTLANGLRIPLGGTYQRF 263
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 43 RRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDA--GGFEALVAGKTTNMQQI 100
RR + +A + A A + +E + E L + D+ G L A T +
Sbjct: 53 RRVFKVRATDTGEIGSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSET---RA 109
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
++ + IT LE NPTP PT + F L G+W + FV F + R L +
Sbjct: 110 EIGDLITQLESKNPTPAPTEALFLLNGKWILAYTS------FVNLFPLLSRGIVPLIKVD 163
Query: 159 NMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEGILESP 211
+ I + NF + NS+ + S + K + P R++ ++ +G++ +P
Sbjct: 164 EISQTID------SDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTP 217
Query: 212 TVIEET-IPEQLKGAFNQAV--TTVQQLPAPIRDAISGGLRIPLSKCFIIFNLP 262
+ + IPE ++ Q + ++ L ++D S R S+ + F+LP
Sbjct: 218 QLTDSIEIPEYVE-VLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLP 270
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 101 DVNERITGLERLNPTPRPTTSP-FLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
+V E + LE LNPTP P +P L+G W + A F P LA S
Sbjct: 177 EVLELVNQLEALNPTPAPLENPELLDGNWVL---------LYTA---FSELIPLLAAGST 224
Query: 160 MDVVIK------DGKANITANFKLLNSIESKFSFS--TKLLVEGPLRLKEEYIEGILESP 211
+ +K D I N L+S + FSFS V P R++ + EG L+ P
Sbjct: 225 PLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPP 284
Query: 212 TVIEET-IPEQLKGAFNQAVTT---------VQQLPAPIRDAISGG--LRIP 251
+ +PE + G F Q ++ +Q + A I A+SG L++P
Sbjct: 285 VIKSSVDLPESV-GVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLP 335
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
++ + IT LE NPTP PT + F L G+W + FV F + R L +
Sbjct: 119 EIGDLITQLESKNPTPAPTDALFLLNGKWILAYTS------FVGLFPLLSRGIVPLVKVD 172
Query: 159 NMDVVIKDGKANITANFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESP 211
+ I + NF + NS+ + S + K + P R++ ++ EG++ +P
Sbjct: 173 EISQTID------SDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTP 226
Query: 212 TVIEET-IPEQLKGAFNQ-AVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNLP 262
+ + IPE ++ + +T ++ L ++D + R S+ + F+LP
Sbjct: 227 QLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLP 279
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 41/185 (22%)
Query: 93 KTTNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFP 151
+ ++ + +V E IT LE NPTP PT + L G+W +A F +
Sbjct: 111 RASSETRAEVVELITQLEARNPTPAPTEALTLLNGKW------------ILAYTSFSQLF 158
Query: 152 PTL--ANLSNMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEE 202
P L +L + V + + + NF + N I+ + S + K V P R++ +
Sbjct: 159 PLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIK 218
Query: 203 YIEGILESPTVIEETI-PEQ------------LKGAFNQAVTTVQQLPAPIRDAISGG-- 247
+ EGI+ +P + + + PE+ LKG F ++++ + + ISG
Sbjct: 219 FDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIF----SSIENAASSVARTISGQPP 274
Query: 248 LRIPL 252
L+IP+
Sbjct: 275 LKIPI 279
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
+++E IT LE NPTP P + F L G+W + FV F + R L +
Sbjct: 118 EISELITQLESKNPTPAPNEALFLLNGKWILAYTS------FVGLFPLLSRRIEPLVKVD 171
Query: 159 NMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEGILESP 211
+ I + +F + NS+ + FS + K + P R++ ++ +G++ +P
Sbjct: 172 EISQTID------SDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTP 225
Query: 212 TVIEET-IPEQLKGAFNQAV--TTVQQLPAPIRDAISGGLRIPLSKCFIIFNLP 262
+ + IPE ++ Q + ++ L ++D S R ++ + F+LP
Sbjct: 226 QLTDSIEIPESVE-VLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLP 278
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 95 TNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPT 153
T+ + ++ E IT LE NPTP PT + L +W + + G F + R
Sbjct: 117 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY--TSFSGLFP---LLSRGTLP 171
Query: 154 LANLSNMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEG 206
LA + + I + NF + NSI+ + S + K V P R++ ++ EG
Sbjct: 172 LARVEEISQTID------SENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEG 225
Query: 207 ILESPTVIEE-TIPEQLK 223
++ +P V + +PE ++
Sbjct: 226 VIGTPQVTDSLVLPENVE 243
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 101 DVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
++ E IT LE NPTP PT + L G+W +A F P L+
Sbjct: 123 EIVELITQLESKNPTPAPTEALTLLNGKW------------ILAYTTFAGLFPLLSRNLP 170
Query: 160 MDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEGILESPT 212
+ V + + + N + NS++ + + + K V PLR+ ++ EG++ +P
Sbjct: 171 LVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQ 230
Query: 213 VIEE-TIPEQLK--------GAFNQAVTTVQQLPAPIRDAIS 245
+ + IP+ + FN ++++Q + + IS
Sbjct: 231 LTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTIS 272
>sp|A4XWU3|GLND_PSEMY [Protein-PII] uridylyltransferase OS=Pseudomonas mendocina (strain
ymp) GN=glnD PE=3 SV=1
Length = 899
Score = 33.9 bits (76), Expect = 1.1, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 39/154 (25%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A +S +++ I D + IT+ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARI-ITST--------SQFTLDTYVV 751
Query: 193 VEG--------PLRLKEEYIEGILES-------PTVIEETIPEQLKG-AFNQAVT----- 231
++ P R+K+ EG++E+ PT+I+ +P QLK AF VT
Sbjct: 752 LDADGGSIGDNPARIKQ-IREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIHNDA 810
Query: 232 ----TVQQLPAPIRDAISGGLRIPLSKCFIIFNL 261
T+ +L AP R GL + + F+ ++L
Sbjct: 811 QRPVTILELTAPDRP----GLLARIGRIFLEYDL 840
>sp|Q4ZWT0|GLND_PSEU2 [Protein-PII] uridylyltransferase OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=glnD PE=3 SV=1
Length = 898
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 39/154 (25%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A + +++ I D + IT++ SKF+ T ++
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARI-ITSS--------SKFTLDTYIV 750
Query: 193 VE--------GPLRLKEEYIEGILES-------PTVIEETIPEQLKG-AFNQAVT----- 231
++ P R+ ++ EG+ E+ PT+I+ +P QLK AF VT
Sbjct: 751 LDHEGGSIGNNPERI-QDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDA 809
Query: 232 ----TVQQLPAPIRDAISGGLRIPLSKCFIIFNL 261
TV +L AP R GL + K F+ F+L
Sbjct: 810 QRPVTVLELLAPDRP----GLLARIGKIFLEFDL 839
>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica
GN=Os10g0544900 PE=2 SV=1
Length = 393
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 59 APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRP 118
+PA ++ + ++ LL +KDAG LVAG+ + M + N + ++ P
Sbjct: 18 SPAGRPRKGSDAAGRQDGLLWYKDAG---QLVAGEFS-MAVVQANNLLEDHSQVESGPLS 73
Query: 119 TTSPFLEGRWNFEWFGSGSPGFFVARFIFERF 150
TT P L+G + G G P AR+I +
Sbjct: 74 TTDPNLQGTLVGVYDGHGGPE--TARYINDHL 103
>sp|Q48F57|GLND_PSE14 [Protein-PII] uridylyltransferase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=glnD PE=3 SV=1
Length = 898
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A + +++ I D + IT++ SKF+ T ++
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARI-ITSS--------SKFTLDTYIV 750
Query: 193 VEG--------PLRLKE------EYIEGILESPTVIEETIPEQLKG-AFNQAVT------ 231
++ P R++E E + + PT+I+ +P QLK AF VT
Sbjct: 751 LDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQ 810
Query: 232 ---TVQQLPAPIRDAISGGLRIPLSKCFIIFNL 261
TV +L AP R GL + K F+ F+L
Sbjct: 811 RPVTVLELLAPDRP----GLLARIGKIFLEFDL 839
>sp|Q3KHB4|GLND_PSEPF [Protein-PII] uridylyltransferase OS=Pseudomonas fluorescens
(strain Pf0-1) GN=glnD PE=3 SV=1
Length = 900
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A + +++ I D + IT++ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARV-ITSS--------SQFTLDTYIV 751
Query: 193 VE--------GPLRLKE------EYIEGILESPTVIEETIPEQLKG-AFNQAVT------ 231
++ P+R+K+ E + + PT+I+ +P QLK AF VT
Sbjct: 752 LDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHNDAQ 811
Query: 232 ---TVQQLPAPIRDAISGGLRIPLSKCFIIFNL 261
TV +L AP R GL + F+ F+L
Sbjct: 812 RPVTVLELTAPDRP----GLLARVGGIFLEFDL 840
>sp|Q8CP76|EBH_STAES Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ebh PE=4 SV=1
Length = 9439
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 153 TLANLSNMDVVIKDGKANITANFKLLNSIESKFSFS-----------------------T 189
T+ NLSN++ KD + N+ + L ++ + +
Sbjct: 5399 TIRNLSNLNNAQKDAEKNLVNSASTLEQVQQNLQTAQQLDNAMGELRQSIAKKDQVKADS 5458
Query: 190 KLLVEGPLRLKEEYIEGILESPTVIEETI-PEQLKGAFNQAVTTVQ 234
K L E P ++K+ Y + + T+I ET PE LK +QA +VQ
Sbjct: 5459 KYLNEDP-QIKQNYDDAVQRVETIINETQNPELLKANIDQATQSVQ 5503
>sp|Q5HPA2|EBH_STAEQ Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ebh PE=4 SV=2
Length = 9439
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 153 TLANLSNMDVVIKDGKANITANFKLLNSIESKFSFS-----------------------T 189
T+ NLSN++ KD + N+ + L ++ + +
Sbjct: 5399 TIRNLSNLNNAQKDAEKNLVNSASTLEQVQQNLQTAQQLDNAMGELRQSIAKKDQVKADS 5458
Query: 190 KLLVEGPLRLKEEYIEGILESPTVIEETI-PEQLKGAFNQAVTTVQ 234
K L E P ++K+ Y + + T+I ET PE LK +QA +VQ
Sbjct: 5459 KYLNEDP-QIKQNYDDAVQRVETIINETQNPELLKANIDQATQSVQ 5503
>sp|C3K5E4|GLND_PSEFS [Protein-PII] uridylyltransferase OS=Pseudomonas fluorescens
(strain SBW25) GN=glnD PE=3 SV=1
Length = 900
Score = 32.7 bits (73), Expect = 3.0, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 39/154 (25%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A + +++ I D + IT++ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARV-ITSS--------SQFTLDTYIV 751
Query: 193 VE--------GPLRLKEEYIEGILES-------PTVIEETIPEQLKG-AFNQAVT----- 231
++ P+R+K+ EG+ E+ PT+I+ +P QLK AF VT
Sbjct: 752 LDTEGESIGDNPVRVKK-IREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDA 810
Query: 232 ----TVQQLPAPIRDAISGGLRIPLSKCFIIFNL 261
TV +L AP R GL + F+ F+L
Sbjct: 811 QRPVTVLELSAPDRP----GLLARIGGIFLEFDL 840
>sp|B1JBR2|GLND_PSEPW [Protein-PII] uridylyltransferase OS=Pseudomonas putida (strain
W619) GN=glnD PE=3 SV=1
Length = 900
Score = 32.3 bits (72), Expect = 3.6, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 39/154 (25%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A +S +++ I D + IT++ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARI-ITSS--------SQFTLDTYIV 751
Query: 193 VEG--------PLRLKE------EYIEGILESPTVIEETIPEQLKGAFN----------- 227
++ P R+K+ E + + PT+I+ +P QLK FN
Sbjct: 752 LDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLK-HFNFPPQVTILNDA 810
Query: 228 QAVTTVQQLPAPIRDAISGGLRIPLSKCFIIFNL 261
Q T+ ++ AP R GL + + F+ F+L
Sbjct: 811 QRAVTILEITAPDRP----GLLARIGRIFLEFDL 840
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
+++E IT LE NP P P + F L G+W + FV F + R L +
Sbjct: 127 EISELITQLESKNPNPAPNEALFLLNGKWILVYTS------FVGLFPLLSRRISPLVKVD 180
Query: 159 NMDVVIKDGKANITANFKLLNSI-ESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEET 217
+ I + + + + + + S + K V P R++ ++ +G++ +P + +
Sbjct: 181 EISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSI 240
Query: 218 -IPEQLKGAFNQAV--TTVQQLPAPIRDAISGGLRIPLSKCFIIFNLP 262
IPE ++ Q + ++ L ++D S R S+ + F+LP
Sbjct: 241 EIPEFVE-VLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLP 287
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 101 DVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
++ E IT LE NP P PT + L G+W +A F P L+ +
Sbjct: 126 EIVELITQLESKNPNPAPTEALTLLNGKW------------ILAYTSFSGLFPLLSRGNL 173
Query: 160 MDVVIKDGKANITA-NFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESP 211
V +++ I + +F + NS+ + S + K V P R++ ++ EGI+ +P
Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233
Query: 212 TVIEETI-PEQLK--------GAFNQAVTTVQQLPAPIRDAIS 245
+ + + PE ++ F +T+VQ + + +IS
Sbjct: 234 QLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSIS 276
>sp|Q57118|NIFK_FRAAL Nitrogenase molybdenum-iron protein beta chain OS=Frankia alni
GN=nifK PE=3 SV=1
Length = 528
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 183 SKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKG--AFNQAVTTVQQLPAP 239
+KFS ++ +L E LR EYIE + TV+ ET P +KG AF AV V ++ P
Sbjct: 293 AKFSRASLVLQESTLRRTAEYIEKDWKQETVLLET-PLGVKGTDAFLTAVAKVAEVEVP 350
>sp|O74889|SAC31_SCHPO SAC3 family protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPCC576.05 PE=1 SV=1
Length = 1024
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 154 LANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTV 213
A L ++VV K +A I A+ K + + S F L + +EG+LE+PT
Sbjct: 944 FAQLEELEVVRKKREAEIEASSKTVKRLASNNKF-----------LTDSNVEGLLEAPTS 992
Query: 214 IEETIPEQLKGA 225
+E ++ E K A
Sbjct: 993 LENSLVEDDKWA 1004
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 101 DVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
++ E IT LE NP P PT + L G+W +A F P L+ +
Sbjct: 126 EIVELITQLESKNPNPAPTEALTLLNGKW------------ILAYTSFSGLFPLLSRGNL 173
Query: 160 MDVVIKDGKANITA-NFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESP 211
V +++ I + +F + NS+ + S + K V P R++ ++ EGI+ +P
Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233
Query: 212 TVIEETI-PEQLK--------GAFNQAVTTVQQLPAPIRDAIS 245
+ + + PE ++ F +T+VQ + + +IS
Sbjct: 234 QLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSIS 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,375,656
Number of Sequences: 539616
Number of extensions: 3911571
Number of successful extensions: 10489
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 10474
Number of HSP's gapped (non-prelim): 38
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)