Citrus Sinensis ID: 024574

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIQSTSSTSSQQSLEFKSDDSSPLPEESESK
ccccccccHHHHHHHHHccccHHHHHHHHHHHccccccccccccccHHHccccccccccccccccEEEEEEEccEEEEEEcccccEEEEEccEEEccccccccccHHHHHHHHHcccEEEccEEccEEHHHHHHccHHHHcccccccccccEEEcccEEEEEccccccEEEEEccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccEEEEEEccccccccccccHHHHcccccccccccccccccc
cHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHccccccHHHHHHHHHcccccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEcccccccccHHHHHHHHHcccEEEccccccHHHHHHHHccHHccccccccccccEEcccccEEEEEccccccEEEEEEcccHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccEEEEEEEEccccccHHHccHHHHHHHcccccccccHHcccc
mdemmkgqrGWRELAVLGDKINKFTGMIEgliwsprggdsndqpndwafeegphsdfagptsgsTACVAIIRNNHLIvanagdsrcvisrkgqaynlsrdhkpdlEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIvtanpdinsvelcddddfvVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERclapstaggegcdnMTMIIVQFkkpiqstsstssqqslefksddssplpeesesk
mdemmkgqrgWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGqaynlsrdhkpdLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLApstaggegcdNMTMIIVQFKKPIQSTsstssqqslefksddssplpeesesk
MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIqstsstssqqsLEFKsddssplpeesesK
*********GWRELAVLGDKINKFTGMIEGLIWS*****************************STACVAIIRNNHLIVANAGDSRCVISRKGQAY***************RILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF*********************************
*DE***************DKINKFTGMIEGLIWSPRGGDSNDQPNDWAF************SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF*********************************
**********WRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKP******************************
*******QRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIQ****************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIQSTSSTSSQQSLEFKSDDSSPLPEESESK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query265 2.2.26 [Sep-21-2011]
Q9SZ53357 Probable protein phosphat yes no 0.932 0.691 0.817 1e-123
Q67UP9368 Probable protein phosphat yes no 0.932 0.671 0.806 1e-121
Q6ETK3362 Probable protein phosphat no no 0.939 0.687 0.804 1e-120
O81716355 Probable protein phosphat no no 0.886 0.661 0.8 1e-117
Q653S3362 Probable protein phosphat no no 0.928 0.679 0.725 1e-107
Q7K4Q5662 Probable protein phosphat yes no 0.694 0.277 0.532 1e-51
O15355546 Protein phosphatase 1G OS yes no 0.660 0.320 0.535 5e-49
Q4R4V2547 Protein phosphatase 1G OS N/A no 0.660 0.319 0.535 5e-49
P79126543 Protein phosphatase 1G OS yes no 0.660 0.322 0.530 8e-49
Q61074542 Protein phosphatase 1G OS yes no 0.660 0.322 0.530 2e-48
>sp|Q9SZ53|P2C60_ARATH Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1 Back     alignment and function desciption
 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 202/247 (81%), Positives = 228/247 (92%)

Query: 1   MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGP 60
           MDEMM+GQRGWRELAVLGDKINKF+GMIEGLIWSPR GDS ++P+ WAFEEGPHSDFAGP
Sbjct: 98  MDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGP 157

Query: 61  TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH 120
            SGSTACVA++R+  L VANAGDSRCVISRK QAYNLSRDHKPDLEAEKERILKAGGFIH
Sbjct: 158 NSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIH 217

Query: 121 AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDC 180
           AGRVNGSLNL+RAIGDMEFKQNKFL +EKQIVTA+PD+N+VELCDDDDF+VLACDGIWDC
Sbjct: 218 AGRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDC 277

Query: 181 MSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIQSTS 240
           M+SQQLVDFIHEQL+SE+K+S VCE+VL+RCLAP+T+GGEGCDNMTMI+V+FK P  S +
Sbjct: 278 MTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTMILVRFKNPTPSET 337

Query: 241 STSSQQS 247
               + S
Sbjct: 338 ELKPEAS 344

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q67UP9|P2C58_ORYSJ Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1 Back     alignment and function description
>sp|Q6ETK3|P2C11_ORYSJ Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1 Back     alignment and function description
>sp|O81716|P2C21_ARATH Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1 Back     alignment and function description
>sp|Q653S3|P2C70_ORYSJ Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2 Back     alignment and function description
>sp|Q7K4Q5|Y0417_DROME Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1 Back     alignment and function description
>sp|O15355|PPM1G_HUMAN Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1 Back     alignment and function description
>sp|Q4R4V2|PPM1G_MACFA Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1 Back     alignment and function description
>sp|P79126|PPM1G_BOVIN Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2 Back     alignment and function description
>sp|Q61074|PPM1G_MOUSE Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
255548720361 protein phosphatase 2c, putative [Ricinu 0.996 0.731 0.837 1e-129
147775880324 hypothetical protein VITISV_005154 [Viti 0.977 0.799 0.854 1e-128
225430502357 PREDICTED: probable protein phosphatase 0.977 0.725 0.854 1e-128
356514901345 PREDICTED: probable protein phosphatase 0.901 0.692 0.887 1e-127
297798784363 hypothetical protein ARALYDRAFT_491551 [ 0.947 0.691 0.840 1e-127
224092605358 predicted protein [Populus trichocarpa] 0.932 0.689 0.878 1e-126
224143332332 predicted protein [Populus trichocarpa] 0.886 0.707 0.897 1e-126
255638592361 unknown [Glycine max] 0.932 0.684 0.838 1e-124
357465993362 hypothetical protein MTR_3g105880 [Medic 0.932 0.682 0.829 1e-123
357465999362 hypothetical protein MTR_3g105880 [Medic 0.932 0.682 0.829 1e-123
>gi|255548720|ref|XP_002515416.1| protein phosphatase 2c, putative [Ricinus communis] gi|223545360|gb|EEF46865.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/265 (83%), Positives = 244/265 (92%), Gaps = 1/265 (0%)

Query: 1   MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGP 60
           MD+MM+GQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDS DQP+DWAFEEGPHSDFAGP
Sbjct: 98  MDDMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSTDQPDDWAFEEGPHSDFAGP 157

Query: 61  TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH 120
           TSG TACVA+IRN+ L+VANAGDSRCVISRKGQAYNLSRDHKPDLEAE++RILKAGGFIH
Sbjct: 158 TSGCTACVALIRNSQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEAERDRILKAGGFIH 217

Query: 121 AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDC 180
           AGRVNGSLNLARAIGDMEFKQNKFL AEKQIVTANPDIN VELCDDD+F+VLACDGIWDC
Sbjct: 218 AGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINIVELCDDDEFMVLACDGIWDC 277

Query: 181 MSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIQSTS 240
           +SSQQLVDFIHEQL +ESK+S VCERVL+RCLAPSTA GEGCDNMTMI+VQFKKPI  T+
Sbjct: 278 LSSQQLVDFIHEQLKTESKLSLVCERVLDRCLAPSTASGEGCDNMTMILVQFKKPIHHTA 337

Query: 241 STSSQQSLEFKSDDSSPLPEESESK 265
           S + +QS   +S ++    EE+E K
Sbjct: 338 S-ADEQSSHSESAEAESRAEENELK 361

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147775880|emb|CAN60286.1| hypothetical protein VITISV_005154 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225430502|ref|XP_002285549.1| PREDICTED: probable protein phosphatase 2C 60 [Vitis vinifera] gi|296082144|emb|CBI21149.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356514901|ref|XP_003526140.1| PREDICTED: probable protein phosphatase 2C 60-like [Glycine max] Back     alignment and taxonomy information
>gi|297798784|ref|XP_002867276.1| hypothetical protein ARALYDRAFT_491551 [Arabidopsis lyrata subsp. lyrata] gi|297313112|gb|EFH43535.1| hypothetical protein ARALYDRAFT_491551 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224092605|ref|XP_002309679.1| predicted protein [Populus trichocarpa] gi|222855655|gb|EEE93202.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224143332|ref|XP_002324919.1| predicted protein [Populus trichocarpa] gi|222866353|gb|EEF03484.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255638592|gb|ACU19603.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357465993|ref|XP_003603281.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|355492329|gb|AES73532.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|388521645|gb|AFK48884.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357465999|ref|XP_003603284.1| hypothetical protein MTR_3g105880 [Medicago truncatula] gi|355492332|gb|AES73535.1| hypothetical protein MTR_3g105880 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
TAIR|locus:2116777357 AT4G31860 [Arabidopsis thalian 0.886 0.658 0.851 1.2e-111
TAIR|locus:2047344355 AT2G25070 [Arabidopsis thalian 0.886 0.661 0.8 7.2e-107
FB|FBgn0033021662 CG10417 [Drosophila melanogast 0.671 0.268 0.533 6e-48
ASPGD|ASPL0000056464420 AN1358 [Emericella nidulans (t 0.690 0.435 0.526 4.8e-46
UNIPROTKB|O15355546 PPM1G "Protein phosphatase 1G" 0.660 0.320 0.535 7.9e-46
UNIPROTKB|P79126543 PPM1G "Protein phosphatase 1G" 0.660 0.322 0.530 1e-45
UNIPROTKB|E2RFB4544 PPM1G "Uncharacterized protein 0.660 0.321 0.530 1e-45
UNIPROTKB|I3LTN6545 PPM1G "Uncharacterized protein 0.660 0.321 0.530 1e-45
MGI|MGI:106065542 Ppm1g "protein phosphatase 1G 0.660 0.322 0.530 1.6e-45
RGD|628676542 Ppm1g "protein phosphatase, Mg 0.660 0.322 0.530 1.6e-45
TAIR|locus:2116777 AT4G31860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
 Identities = 200/235 (85%), Positives = 224/235 (95%)

Query:     1 MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGP 60
             MDEMM+GQRGWRELAVLGDKINKF+GMIEGLIWSPR GDS ++P+ WAFEEGPHSDFAGP
Sbjct:    98 MDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGP 157

Query:    61 TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH 120
              SGSTACVA++R+  L VANAGDSRCVISRK QAYNLSRDHKPDLEAEKERILKAGGFIH
Sbjct:   158 NSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIH 217

Query:   121 AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDC 180
             AGRVNGSLNL+RAIGDMEFKQNKFL +EKQIVTA+PD+N+VELCDDDDF+VLACDGIWDC
Sbjct:   218 AGRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDC 277

Query:   181 MSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKP 235
             M+SQQLVDFIHEQL+SE+K+S VCE+VL+RCLAP+T+GGEGCDNMTMI+V+FK P
Sbjct:   278 MTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTMILVRFKNP 332
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
TAIR|locus:2047344 AT2G25070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0033021 CG10417 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|O15355 PPM1G "Protein phosphatase 1G" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P79126 PPM1G "Protein phosphatase 1G" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFB4 PPM1G "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LTN6 PPM1G "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:106065 Ppm1g "protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|628676 Ppm1g "protein phosphatase, Mg2+/Mn2+ dependent, 1G" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q67UP9P2C58_ORYSJ3, ., 1, ., 3, ., 1, 60.80640.93200.6711yesno
Q9SZ53P2C60_ARATH3, ., 1, ., 3, ., 1, 60.81780.93200.6918yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-67
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-62
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-57
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-36
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 6e-36
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 9e-34
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  208 bits (532), Expect = 3e-67
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 15/187 (8%)

Query: 46  DWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDL 105
           D    E    +     SG+TA VA+IR N L VAN GDSR V+ R G+A  L++DHKP  
Sbjct: 83  DEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVN 142

Query: 106 EAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCD 165
           E E+ERI KAGG +  GRV G L + RA+GD +          K  V+A PD+  V+L +
Sbjct: 143 EEERERIEKAGGRVSNGRVPGVLAVTRALGDFDL---------KPGVSAEPDVTVVKLTE 193

Query: 166 DDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNM 225
           DDDF++LA DG+WD +S+Q+ VD +  +L  E  +    + +++  L          DN+
Sbjct: 194 DDDFLILASDGLWDVLSNQEAVDIVRSELAKED-LQEAAQELVDLALRRG-----SHDNI 247

Query: 226 TMIIVQF 232
           T+++V+ 
Sbjct: 248 TVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 265
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.97
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.96
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.96
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.96
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.93
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.79
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.69
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.43
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.31
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.22
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.18
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.01
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-45  Score=322.93  Aligned_cols=181  Identities=52%  Similarity=0.917  Sum_probs=173.7

Q ss_pred             CCCCCCcceeEEEEEECCeEEEEEEccccEEEEECCeeeecCCCCCCChHHHHHHHHhcCceEe-eccccCccccccccc
Q 024574           57 FAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH-AGRVNGSLNLARAIG  135 (265)
Q Consensus        57 ~~~~~~GtTa~v~li~~~~l~ianvGDSR~~l~r~g~~~~LT~DH~~~~~~e~~ri~~~g~~v~-~~r~~g~l~ltralG  135 (265)
                      ..|..+|||+||+++.+.+|||||+||||||++|+|+++.||.||+|..+.|..||..+||.|. .+|+||+|+++||||
T Consensus       325 ePG~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~G  404 (542)
T KOG0699|consen  325 EPGEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFG  404 (542)
T ss_pred             CCCCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhh
Confidence            3455699999999999999999999999999999999999999999999999999999999998 899999999999999


Q ss_pred             chhhhcccccccccceeeecCceeEEEecCCCcEEEEEcCCCccCCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcCC
Q 024574          136 DMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPS  215 (265)
Q Consensus       136 d~~~k~~~~~~~~~~~v~~~P~i~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~l~~~a~~~~  215 (265)
                      |..||.+..+|+.+|+|++-|+|....|++.|+|+|+||||||++|+.+++++||+..+..+..+..||+.|++.|+++.
T Consensus       405 DHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~  484 (542)
T KOG0699|consen  405 DHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPS  484 (542)
T ss_pred             hhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCceEEEEEecCCCC
Q 024574          216 TAG-GEGCDNMTMIIVQFKKPIQ  237 (265)
Q Consensus       216 ~~~-~~~~DNiTvivv~~~~~~~  237 (265)
                      +.+ +.+|||||||++.|++...
T Consensus       485 T~GDGTGCDNMT~ii~~Fkrk~~  507 (542)
T KOG0699|consen  485 TDGDGTGCDNMTVIITTFKRKSK  507 (542)
T ss_pred             CCCCCcCCCcceEEEEEeccchh
Confidence            887 7889999999999996533

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-48
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 6e-31
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 6e-31
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-29
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-22
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-22
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 8e-22
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-20
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-20
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-20
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 7e-20
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 7e-20
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 7e-20
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 8e-20
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 8e-20
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 8e-20
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 5e-12
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 9e-12
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 1e-11
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 6e-10
2pom_A372 Tab1 With Manganese Ion Length = 372 1e-08
2j4o_A401 Structure Of Tab1 Length = 401 1e-08
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 1e-08
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 2e-06
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/178 (53%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 59  GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGF 118
           G  SG TA VA++    L VANAGDSRCV+ R G+A  +S DHKP+   E +RI KAGG 
Sbjct: 127 GKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGR 186
Query: 119 IHA-GRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGI 177
           +   GRVNG LNL+RAIGD  +K NK L AE+Q+++A PDI  + +  +D+F+VLACDGI
Sbjct: 187 VTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGI 246
Query: 178 WDCMSSQQLVDFIHEQLHSES-KISAVCERVLERCLAPSTAG-GEGCDNMTMIIVQFK 233
           W+ M+S+Q+V F+ E+++    K+S +CE + + CLAP T G G GCDNMT IIVQFK
Sbjct: 247 WNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-95
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-94
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-92
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 9e-83
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 6e-82
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-81
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-75
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 7e-75
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-74
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 8e-72
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-67
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-64
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 7e-58
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 5e-14
3rnr_A211 Stage II sporulation E family protein; structural 3e-13
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-12
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-10
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 5e-10
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
 Score =  281 bits (721), Expect = 2e-95
 Identities = 94/189 (49%), Positives = 128/189 (67%), Gaps = 3/189 (1%)

Query: 48  AFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEA 107
           + +        G  SG TA VA++    L VANAGDSRCV+ R G+A  +S DHKP+   
Sbjct: 116 SGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTV 175

Query: 108 EKERILKAGGFI-HAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDD 166
           E +RI KAGG +   GRVNG LNL+RAIGD  +K NK L AE+Q+++A PDI  + +  +
Sbjct: 176 EYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPE 235

Query: 167 DDFVVLACDGIWDCMSSQQLVDFIHEQLH-SESKISAVCERVLERCLAP-STAGGEGCDN 224
           D+F+VLACDGIW+ M+S+Q+V F+ E+++    K+S +CE + + CLAP +   G GCDN
Sbjct: 236 DEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDN 295

Query: 225 MTMIIVQFK 233
           MT IIVQFK
Sbjct: 296 MTAIIVQFK 304
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.97
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.97
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.97
3rnr_A211 Stage II sporulation E family protein; structural 99.96
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.96
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.67
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.61
3f79_A255 Probable two-component response regulator; adaptor 99.51
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.41
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.88
3eq2_A394 Probable two-component response regulator; adaptor 98.05
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
Probab=100.00  E-value=4.9e-41  Score=300.87  Aligned_cols=175  Identities=55%  Similarity=0.952  Sum_probs=154.7

Q ss_pred             CCCCcceeEEEEEECCeEEEEEEccccEEEEECCeeeecCCCCCCChHHHHHHHHhcCceEe-eccccCcccccccccch
Q 024574           59 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH-AGRVNGSLNLARAIGDM  137 (265)
Q Consensus        59 ~~~~GtTa~v~li~~~~l~ianvGDSR~~l~r~g~~~~LT~DH~~~~~~e~~ri~~~g~~v~-~~r~~g~l~ltralGd~  137 (265)
                      ...+|||++++++.++++|+|||||||+|++|+|++.+||+||++.++.|+.||..+|+.+. .+|++|.+.+||||||.
T Consensus       127 ~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~  206 (304)
T 2i0o_A          127 GKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDH  206 (304)
T ss_dssp             TTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECG
T ss_pred             CCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCH
Confidence            34699999999999999999999999999999999999999999999999999999999988 77889999999999999


Q ss_pred             hhhcccccccccceeeecCceeEEEecCCCcEEEEEcCCCccCCCHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHhcCCC
Q 024574          138 EFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHS-ESKISAVCERVLERCLAPST  216 (265)
Q Consensus       138 ~~k~~~~~~~~~~~v~~~P~i~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~-~~~~~~~a~~l~~~a~~~~~  216 (265)
                      .||.+..+++..+.|+++|++..+++.++|.|||||||||||+++++++++++.+.+.. ..+++.+|+.|++.|++++.
T Consensus       207 ~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~  286 (304)
T 2i0o_A          207 GYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHT  286 (304)
T ss_dssp             GGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC----
T ss_pred             HHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhh
Confidence            99999999988999999999999999999889999999999999999999999987655 56899999999999998664


Q ss_pred             CC-CCCCCCceEEEEEec
Q 024574          217 AG-GEGCDNMTMIIVQFK  233 (265)
Q Consensus       217 ~~-~~~~DNiTvivv~~~  233 (265)
                      .+ +++.||+|||||+|+
T Consensus       287 ~g~~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          287 RGDGTGCDNMTAIIVQFK  304 (304)
T ss_dssp             --------CEEEEEEEEC
T ss_pred             ccCCCCCCCeEEEEEEeC
Confidence            43 568999999999985
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 265
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 8e-38
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-14
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 8e-38
 Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 6/174 (3%)

Query: 61  TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH 120
            SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG + 
Sbjct: 123 RSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 182

Query: 121 AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVEL-CDDDDFVVLACDGIWD 179
             RVNGSL ++RA+GD ++K        +Q+V+  P+++ +E   +DD F++LACDGIWD
Sbjct: 183 IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWD 242

Query: 180 CMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 233
            M +++L DF+  +L     +  VC  V++ CL          DNM++I++ F 
Sbjct: 243 VMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-----GSRDNMSVILICFP 291
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.97
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-42  Score=305.26  Aligned_cols=172  Identities=38%  Similarity=0.700  Sum_probs=163.4

Q ss_pred             CCCcceeEEEEEECCeEEEEEEccccEEEEECCeeeecCCCCCCChHHHHHHHHhcCceEeeccccCcccccccccchhh
Q 024574           60 PTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEF  139 (265)
Q Consensus        60 ~~~GtTa~v~li~~~~l~ianvGDSR~~l~r~g~~~~LT~DH~~~~~~e~~ri~~~g~~v~~~r~~g~l~ltralGd~~~  139 (265)
                      ..+|||+++++|.++++|+||+||||+|++++|++.+||.||++.++.|++||...|+.+...|++|.+.+||||||+.|
T Consensus       122 ~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~  201 (295)
T d1a6qa2         122 DRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDY  201 (295)
T ss_dssp             CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGG
T ss_pred             CCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhHhhcCCcccccccCCceeeeeccCcHHh
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccccccceeeecCceeEEEec-CCCcEEEEEcCCCccCCCHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcCCCCC
Q 024574          140 KQNKFLSAEKQIVTANPDINSVELC-DDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAG  218 (265)
Q Consensus       140 k~~~~~~~~~~~v~~~P~i~~~~l~-~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~l~~~a~~~~~~~  218 (265)
                      |......+..+.|+++|+|..+.+. ++++|||||||||||+|++++++++|++.+....+++.+|+.|++.|+.     
T Consensus       202 k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~-----  276 (295)
T d1a6qa2         202 KCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY-----  276 (295)
T ss_dssp             SCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH-----
T ss_pred             hhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh-----
Confidence            9999888999999999999999986 5577999999999999999999999999888888999999999999999     


Q ss_pred             CCCCCCceEEEEEecCCC
Q 024574          219 GEGCDNMTMIIVQFKKPI  236 (265)
Q Consensus       219 ~~~~DNiTvivv~~~~~~  236 (265)
                      +++.||||||||+|+..+
T Consensus       277 ~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         277 KGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             TTCCSCEEEEEEECTTSC
T ss_pred             cCCCCCeEEEEEeccCCC
Confidence            788999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure