Citrus Sinensis ID: 024575

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFHSGTS
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEEcccccccHHHHHHHHcccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHcccEEEEEEccccccHHHcccHccccccccccccEEEEcccccHHHHHHHHHcccccEEEEHHHHHcccHHHHHHHHccccEEEEEEcccHcccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHccccccEccccccEEEEEEHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHccccccccEEEccccccccccccHccccccc
Coil and Loop (DISEMBL)
MGGTRFIGVFLSRLLvkeghqvtlftrgkapiaqqlpgesdqEFAEFSSKILhlkgdrkdydfvksslsakgfdvvydingreadevepildalpnleqFIYCssagvylksdllphcetdtvdpksrhkgklntESVLEskgvnwtslrpvyiygplnynpvEEWFFHRlkagrpipipgsgiqvtqlgHVKDLARAFVQVLGNEKASRQVFNIsgekyvtfDGLARACAKVTglldfrslnlctttpksLTLVKRRLFHSGTS
Flexible Loop (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILhlkgdrkdYDFVKsslsakgfdvVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCEtdtvdpksrhkgklntesvleskgvnwtslrpVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGnekasrqvfnISGEKYVTFDGLARACAKVTGlldfrslnlctttpksltlvkrrlfhsgts
Low Complexity Region (SEG)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFHSGTS
Disordered region (IsUnstruct)
****RFIGVFLSRLLVKEGHQVTLFTRGKAPI**************FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET******************LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLF*****
Disordered Region (DISOPRED)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFH****
Disordered Region (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ*********AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD***********LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFHSGTS
Disordered Region (DISPRO)
*GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT*****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFHSGTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q9SA52	378	Chloroplast stem-loop bin	yes	no	0.969	0.679	0.807	1e-125
Q9LYA9	406	Chloroplast stem-loop bin	no	no	0.935	0.610	0.326	2e-34
Q45291	329	UDP-glucose 4-epimerase O	no	no	0.826	0.665	0.254	4e-05
P55579	396	Uncharacterized protein y	yes	no	0.822	0.550	0.228	0.0004

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  447 bits (1151), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/260 (80%), Positives = 234/260 (90%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G   F 
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
           GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct: 90  GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
              V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237
           IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA   G  
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-- 320

Query: 238 DFRSLNLCTTTPKSLTLVKRRLF 260
             +++ +    PK++ +  ++ F
Sbjct: 321 --KTVEIVHYDPKAIGVDAKKAF 341

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 48.9 bits (115), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 56/275 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  ++G   + +L++ GH VT+         + +P ++             ++GD    
Sbjct: 7   GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVN-- 53

Query: 62  DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
           D V+  LS  GF+ V     R    + VE               +LDA+    +   ++ 
Sbjct: 54  DVVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLESK----GVNWTSLRPVYI---Y 155
           S+A  Y + D++P  E     P + +   KL+ +  + S     G+  TSLR   +   Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173

Query: 156 GPLNYN-PVEEWFF---------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
           G +  N  VE             HR K    G   P P  G  V    H+ DLA+A V  
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232

Query: 203 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKVTG 235
           L  NE    ++FN+ SG+ Y +   +   C +VTG
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTG 266

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=4 SV=1

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 27/245 (11%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-------L 54
           GG+ + G  LS+ L+++G  V +F           PG S          IL        L
Sbjct: 56  GGSGYFGELLSKQLLRQGTYVRVFDLNP-------PGFSHPNLEFLKGTILDRNAVRQAL 108

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSSAGVYLKS 112
            G  K +  V     AK  D+ + +N       + I+D      +E+F+Y SS+ V+   
Sbjct: 109 SGIDKVFHNVAQVPLAKEKDLFWSVN---CGGTQIIVDESVATGIEKFVYTSSSAVFGAP 165

Query: 113 DLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
              P  E    +P     +++  G++  +  ++  G++   +RP  + G      V +  
Sbjct: 166 KSNPVTEETEPNPAEDYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG-YGRQGVVQIL 224

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227
           F  ++ G  IP+ G G    Q  H  DLA A +    +       +NI   ++ T   L 
Sbjct: 225 FDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAA--SNVKGFATYNIGAAEFGTMRELL 282

Query: 228 RACAK 232
           +   K
Sbjct: 283 QVVIK 287

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
255542956	381	NAD dependent epimerase/dehydratase, put	0.969	0.674	0.838	1e-126
363806740	378	uncharacterized protein LOC100791076 [Gl	0.969	0.679	0.826	1e-126
356572914	378	PREDICTED: uncharacterized protein At1g0	0.969	0.679	0.826	1e-125
312282041	379	unnamed protein product [Thellungiella h	0.969	0.678	0.815	1e-124
388497252	378	unknown [Medicago truncatula]	0.969	0.679	0.830	1e-124
118489564	380	unknown [Populus trichocarpa x Populus d	0.969	0.676	0.823	1e-124
388512335	378	unknown [Medicago truncatula]	0.969	0.679	0.826	1e-123
15217485	378	RNA binding protein [Arabidopsis thalian	0.969	0.679	0.807	1e-123
224124986	380	predicted protein [Populus trichocarpa]	0.969	0.676	0.823	1e-123
118487652	380	unknown [Populus trichocarpa]	0.969	0.676	0.823	1e-123

>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/260 (83%), Positives = 233/260 (89%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAK  G   F 
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGG---FP 297

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 298 EPEIVHYNPKEFDFGKKKAF 317

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max]

 Score =  455 bits (1170), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/260 (82%), Positives = 235/260 (90%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
           GSGIQ+TQLGHVKDLA+AF+QV GNEKAS++VFNISG+K+VTFDGLARACAK  G   F 
Sbjct: 239 GSGIQITQLGHVKDLAKAFIQVFGNEKASKEVFNISGDKHVTFDGLARACAKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/260 (82%), Positives = 234/260 (90%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SG+Q+TQLGHVKDLA AF+QVLGNEKAS++VFNISGEKYVTFDGLARACAK  G   F 
Sbjct: 239 SSGLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/260 (81%), Positives = 234/260 (90%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAK  G   F 
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/260 (83%), Positives = 232/260 (89%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARACAK  G   F 
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/260 (82%), Positives = 233/260 (89%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G   F 
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAG---FP 296

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 297 EPEIVHYNPKDFDFGKKKAF 316

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/260 (82%), Positives = 231/260 (88%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARAC K  G   F 
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACVKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/260 (80%), Positives = 234/260 (90%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G   F 
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 295

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/260 (82%), Positives = 232/260 (89%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G   F 
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAG---FP 296

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 297 EPEIVHYNPKDFDFGKKKAF 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/260 (82%), Positives = 232/260 (89%), Gaps = 3/260 (1%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G   F 
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAG---FP 296

Query: 241 SLNLCTTTPKSLTLVKRRLF 260
              +    PK     K++ F
Sbjct: 297 EPEIVHYNPKDFDFGKKKAF 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.969	0.679	0.807	5.8e-114
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.935	0.610	0.326	2.5e-33
TIGR_CMR|GSU_0385	294	GSU_0385 "NADH dehydrogenase s	0.392	0.353	0.268	1.5e-05
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.501	0.429	0.287	6.4e-05
UNIPROTKB|Q71YS4	291	LMOf2365_1769 "Putative unchar	0.826	0.752	0.257	0.00021
UNIPROTKB|Q81JK7	292	BA_5697 "Uncharacterized prote	0.362	0.328	0.318	0.00021
TIGR_CMR|BA_5697	292	BA_5697 "conserved hypothetica	0.362	0.328	0.318	0.00021
UNIPROTKB|Q83DM2	301	CBU_0681 "NAD dependent epimer	0.498	0.438	0.290	0.00038
TIGR_CMR|CBU_0681	301	CBU_0681 "conserved hypothetic	0.498	0.438	0.290	0.00038
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.664	0.553	0.266	0.00043

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 210/260 (80%), Positives = 234/260 (90%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct:    59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
             YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct:   119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query:   121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
             D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct:   179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query:   181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
              SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G   F 
Sbjct:   239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 295

Query:   241 SLNLCTTTPKSLTLVKRRLF 260
                +    PK     K++ F
Sbjct:   296 EPEIVHYNPKEFDFGKKKAF 315

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 86/263 (32%), Positives = 139/263 (52%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
             GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct:    90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct:   149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query:   119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct:   206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query:   179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237
             IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA   G  
Sbjct:   263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-- 320

Query:   238 DFRSLNLCTTTPKSLTLVKRRLF 260
               +++ +    PK++ +  ++ F
Sbjct:   321 --KTVEIVHYDPKAIGVDAKKAF 341

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 108 (43.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 29/108 (26%), Positives = 47/108 (43%)

Query:   129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
             H+ K   E V+    ++WT  RP  I+GP   +  +   F  R  A   +P+ G G    
Sbjct:   122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178

Query:   188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
             Q   V D+AR F   L   +   Q + + G   +T++ +     +V G
Sbjct:   179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 44/153 (28%), Positives = 75/153 (49%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct:    11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  GV +     
Sbjct:    68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119

Query:   116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
                 T  V+P KS   GK+     +E++G+ +T
Sbjct:   120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
 Identities = 64/249 (25%), Positives = 107/249 (42%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
             GGTRF G  L   LV EGH+VT+ TRGK          ++  F +   +++ L  + +D 
Sbjct:     7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55

Query:    62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY-------LKSD 113
              F    L+ + +DV+YD       E    +DA    ++++IY SS  VY       +++D
Sbjct:    56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEAD 112

Query:   114 LLP-HCETDTVDPKSRH--KGKLNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFH 169
               P H E    D +     +GK   E+V   K      ++R   + G  +Y     +  +
Sbjct:   113 FNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHIN 172

Query:   170 RLKAGRPIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
              +K  + I I  S  Q  ++G +  D A  F++ +G E       N +       +G  +
Sbjct:   173 HIKNHQEIGI--SNGQA-EIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIK 229

Query:   229 ACAKVTGLL 237
                +  G L
Sbjct:   230 MLEEKIGKL 238

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q83DM2 CBU_0681 "NAD dependent epimerase/dehydratase family" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
 Identities = 43/148 (29%), Positives = 67/148 (45%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKVT 234
             + SR V NI+  + ++F  LA    +++
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLS 242

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0681 CBU_0681 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
 Identities = 43/148 (29%), Positives = 67/148 (45%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKVT 234
             + SR V NI+  + ++F  LA    +++
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLS 242

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
 Identities = 52/195 (26%), Positives = 85/195 (43%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT  IG  +    VK GH      R +A ++    G++ Q F +F   +LH  GD  D
Sbjct:    11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
             ++ +  ++  K  DVV    G        ILD    +       +   +L S+  +   +
Sbjct:    68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120

Query:   120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             +  V+P KS    KL T   +E++G+ +T L   Y  G   Y P       +L+ G   P
Sbjct:   121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174

Query:   179 IPGSGIQVTQLGHVK 193
              P   +++   G+VK
Sbjct:   175 -PRDKVKIFGDGNVK 188


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      265       265   0.00093  114 3  11 22  0.48    33
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  193 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.84u 0.08s 22.92t   Elapsed:  00:00:01
  Total cpu time:  22.85u 0.08s 22.93t   Elapsed:  00:00:01
  Start:  Fri May 10 14:08:31 2013   End:  Fri May 10 14:08:32 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA52	CP41B_ARATH	No assigned EC number	0.8076	0.9698	0.6798	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-143
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-92
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-23
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-22
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-19
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-17
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	2e-15
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	2e-14
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-11
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	5e-10
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	7e-10
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	8e-10
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-09
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	6e-09
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-08
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-08
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	5e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	8e-08
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-07
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	6e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	2e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-05
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	6e-05
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	7e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	8e-05
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	9e-05
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	5e-04
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	5e-04
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	6e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	8e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	0.002
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	0.002
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.002
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.003
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.003
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	0.003
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	0.003
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  405 bits (1043), Expect = e-143
 Identities = 135/238 (56%), Positives = 165/238 (69%), Gaps = 10/238 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           GG  FIG +L++ LVK GH+VTLFTRGK P +Q++  E    F+E SS  +  + GD  D
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
              VKS ++  GFDVVYD NG++ DEVEP+ D    P L+QF++CSSAGVY KSD  PH 
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V PK+   G L  E+ L+  GVNWTS RP YIYGP N    EEWFF RL  GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
           IPGSGIQ+TQLGHVKDLA  F  V+GN KA+ Q+FNI  ++ VTFDG+A+ACAK  G 
Sbjct: 236 IPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGF 293

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  273 bits (700), Expect = 1e-92
 Identities = 99/245 (40%), Positives = 127/245 (51%), Gaps = 23/245 (9%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGTRFIG  L   L+  GH VT+F RG+                     + H+ GDR D
Sbjct: 6   IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
            D ++  L  + FDVV D       +VE  LDA    ++Q+I+ SSA VYLK      + 
Sbjct: 53  RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112

Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            P  E D V   DP    +GK   E VL       +T +RP YIYGP +Y     +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
           L  GRPI +PG G  + Q  HVKDLARA +   GN KA   +FNI+G++ VT+D L  AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232

Query: 231 AKVTG 235
           AK  G
Sbjct: 233 AKALG 237

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 96.2 bits (239), Expect = 2e-23
 Identities = 62/268 (23%), Positives = 90/268 (33%), Gaps = 47/268 (17%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            GG  FIG  L   L+  GH V    R +  +   L G            +  +  D  D
Sbjct: 6   TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG------------VEFVVLDLTD 53

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            D V         D V       +  +++  +P      N+               ++F+
Sbjct: 54  RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
           + SS  V          + D   P+        KL  E +L +     G+    LRP  +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
           YGP +   +             K    I I G G Q     +V D+A A +  L  E   
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230

Query: 210 RQVFNI-SGEKYVTFDGLARACAKVTGL 236
             VFNI SG   +T   LA A A+  G 
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGS 258

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 90.4 bits (225), Expect = 3e-22
 Identities = 60/225 (26%), Positives = 85/225 (37%), Gaps = 39/225 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L R L++ GH+V +  R                       ++HL       
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
                  S    D  ++ N         +L+A     +++F+Y SSA VY   + LP  E
Sbjct: 44  -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95

Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
                P S     KL  E +L S     G+    LR   +YGP      + V   F  R 
Sbjct: 96  ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
             G+P+ + G G Q     HV D+ RA +  L N      V+NI 
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L R L++EG++V +  R +   +                 I   +GD  D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52

Query: 62  DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
           D ++  L+    D V           +  +  +           +L+A     +++F++ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
           SS+ VY      P  E   + P S     K   +   E+   + G+    LR   +YGP 
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
           N +P           R+  G+PI + G G Q     +V D+ARA +  L +      ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231

Query: 215 I 215
           I
Sbjct: 232 I 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 48/250 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG QV +F R   P    L G       ++       KGD ++ 
Sbjct: 6   GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53

Query: 62  DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
             ++S+L        +    N   +    PILD   N+                + I+ S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
           S G VY   + LP  E+D   P S +   KL  E  L       G+++T LR    YGP 
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172

Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211
                     P+     +++  G PI I G G  +    ++ DL  A + +L ++     
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE- 228

Query: 212 VFNI-SGEKY 220
           VFNI SG  Y
Sbjct: 229 VFNIGSGIGY 238

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 61/218 (27%), Positives = 83/218 (38%), Gaps = 27/218 (12%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           ++G  L+R L+ +G QVT  TR    +A   P       A+     L   G   D D + 
Sbjct: 8   YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62

Query: 66  SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
            SL            G     +  +LDAL   P +++ IY SS GVY   D      +  
Sbjct: 63  ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116

Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           +    S   G+  L  E  L + G    T LR   IYGP   +P+      RL  G    
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            P +G   T   HV DL  A    L        V+N+ 
Sbjct: 169 RPPAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVV 205

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 62/278 (22%), Positives = 104/278 (37%), Gaps = 52/278 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
           G T FIG ++   L K G QV +  R +A   + L  G+  Q        +L ++ D +D
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58

Query: 61  YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
            + ++ +L  +G DVV ++ GR         E +    P           +E+ I+ S+ 
Sbjct: 59  DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
           G             D   P    + K   E  +       T +RP  ++G  +       
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158

Query: 167 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           F +R        P  P+ G G    Q  +V D+A A  + L + +   + + + G K  T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 223 FDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLF 260
              L     ++ G    R L L    P  L  +  R+ 
Sbjct: 219 LAELVELLRRLGG-RKRRVLPL----PLWLARLIARVK 251

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 38/208 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L + L+  GHQVT  +R  +                 +  +  ++ D  D 
Sbjct: 5   GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50

Query: 62  DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
             +  +L   G D V D    R  D   V+ +LDA       + +  S+AG+Y  +    
Sbjct: 51  ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
              +     P +R K     E +L + G++WT +RP  ++        E           
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVL 203
            I                D+A A +  L
Sbjct: 166 SI-------------SRADVAAALLDEL 180

Length = 182

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 52/245 (21%), Positives = 88/245 (35%), Gaps = 48/245 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  +  LL+ +   V    R           E  + FA    ++        DY
Sbjct: 5   GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50

Query: 62  DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
           D  ++   A +G D +             + +  +DA            AGV    YL  
Sbjct: 51  DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100

Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 172
                 + D+    +R  G   TE  LE+ G+ +T LRP +    L      E+    L+
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILE 151

Query: 173 AGRPIPIPGSGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
            G      G G     +  V  +D+A A    L       +V+N++G + +++  LA   
Sbjct: 152 EGTIYGPAGDGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAIL 207

Query: 231 AKVTG 235
           ++  G
Sbjct: 208 SEALG 212

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 58.2 bits (141), Expect = 7e-10
 Identities = 62/257 (24%), Positives = 99/257 (38%), Gaps = 44/257 (17%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F G  L + L++  G  V  F       A       + EF         LKGD  D
Sbjct: 6   GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56

Query: 61  YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
            + V+ +LS  G D V+           R+   EV     + +LDA     +++F+Y SS
Sbjct: 57  RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114

Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
           + V             LP+   D+ D  +  K  +    VLE+ G +     +LRP  I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172

Query: 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASRQ 211
           GP     +    F   + G    + G G  +    +V +LA A +      +  +  S Q
Sbjct: 173 GP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQ 231

Query: 212 VFNISGEKYVTFDGLAR 228
            + I+  +      L R
Sbjct: 232 TYFITDAEPHNMFELLR 248

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 57.6 bits (139), Expect = 8e-10
 Identities = 50/240 (20%), Positives = 77/240 (32%), Gaps = 33/240 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T F+G  + R L+  GH+V    R     A  L G  +    +    K L       D
Sbjct: 7   GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65

Query: 61  YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
              + S L           V   +   EA        A   ++  +  S  G        
Sbjct: 66  GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
                D   P +  + K   E+ L S G+ +T+LR    Y          +      AG 
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           P+   G G        V D+A A    L     + + + ++G + +T   LA       G
Sbjct: 162 PVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG 219

Length = 275

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 67/270 (24%), Positives = 100/270 (37%), Gaps = 55/270 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   L++ GH+V +    + GK    + LP        E    +  ++GD 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54

Query: 59  KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
           +D + V+ +          A    V   I        +PI D   N              
Sbjct: 55  RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107

Query: 97  -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
            +++F+Y SS+ VY     LP  E    +P S +   K   E          G+   SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205
              +YGP       Y  V   F  R   G P  I G G Q     +V+D+  A +     
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTG 235
             A  +V+NI   K  + + LA    ++ G
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILG 256

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 60/262 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L++EGH+V       +  +  L   +  +   F      + GD +D 
Sbjct: 6   GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59

Query: 62  DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
             V+  +  K  DVV+                  VE  +               ++ ++ 
Sbjct: 60  SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 104 SSAGVYLKSDLLPHCETDTVD-------PKSRHKGKLN--TESVLESKGVNWTSLRPVYI 154
           S++ VY  +  +P  E   +        P S  K   +    S   S G+  T +RP   
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 155 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 201
           YGP            R  A   IP               G G        VKD AR F+ 
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225

Query: 202 VLGNEKASRQVFNISGEKYVTF 223
           +L   +A  ++ N    + ++ 
Sbjct: 226 ILDAIEAVGEIINNGSGEEISI 247

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 44/231 (19%), Positives = 75/231 (32%), Gaps = 46/231 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
           G T  +G  + R L+  G+QV    R  +   +     ++    +     S    L+G  
Sbjct: 6   GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVY----L 110
              D V S+  + G            D      ++DA     +++F+  SS G       
Sbjct: 64  --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              L P+              K   E  L + G+++T +RP    G L  +P        
Sbjct: 119 LEALGPY-----------LDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVL 163

Query: 171 LKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
              G  +  PI  +           D+A    + L    A  + F + G  
Sbjct: 164 GGDGTRLDGPISRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG  L+R L+++GH+VTL  R           + DQE           +GD +D 
Sbjct: 5   GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
           D +  ++  +G DVV        + R+  EV+      +L+A     ++ FI+ SS G Y
Sbjct: 54  DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
              DL    E     P    K K  TE+VL    + +T +RP  IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 11/110 (10%)

Query: 136 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 185
           E+  +  G ++ S+ P  +YGP  N++P            FH  K   G+ + + GSG  
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203

Query: 186 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
             +  +  DLARA V +L N      + N+     ++   LA A A+V G
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVG 252

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 56/266 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F+G  L R L+ +G++V    R  +  A  L G    E  E         GD  D 
Sbjct: 5   GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
             + +++  KG D V+       +  ++  E+    ++   N+          + ++ SS
Sbjct: 54  ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
                        +  P  E    +   R K  L    VLE  ++G++   + P  ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170

Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            +  P              +P  P  G        V+D+A   +  +  EK  R      
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRR------ 219

Query: 217 GEKY------VTFDGLARACAKVTGL 236
           GE+Y      ++F  L    A++TG+
Sbjct: 220 GERYILGGENLSFKQLFETLAEITGV 245

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 63/269 (23%), Positives = 91/269 (33%), Gaps = 57/269 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+  G +V +  R           E     AE               
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP------------- 46

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-----NLE---------------QFI 101
           D    +    G D V  +  R     +   D L      N E               +F+
Sbjct: 47  DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106

Query: 102 YCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
           + SS  V  +  +  P  ETD   P+  + + KL  E  L     S G+    LRP  +Y
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVY 166

Query: 156 GP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           GP    N+  +       +  G P+P PG+      L  + +L  A    +   KA+   
Sbjct: 167 GPGVRGNFARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAANGT 221

Query: 213 FNISGEKYVT----FDGLARACAKVTGLL 237
           F +S    V+     D + RA  K T LL
Sbjct: 222 FLVSDGPPVSTAELVDEIRRALGKPTRLL 250

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 39/255 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T FIG  + R LV  GH+V    R            SD   A+  +      +GD +D
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54

Query: 61  YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
            D ++ + +         F   +D   +  +     +E + +AL    +  IY S   + 
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114

Query: 110 LKSDLLPHCETDTVDPKS---RHKGKLNTESVLESKGVNWTSLR-PVYIYGPLNYNPVEE 165
             +      E    DP +   R   +      L  +GV  + +R P     P+ +   + 
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALE-LAERGVRASVVRLP-----PVVHGRGDH 168

Query: 166 WFF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
            F        +        G G       H  D AR +   L   KA   V++   E+ +
Sbjct: 169 GFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGI 227

Query: 222 TFDGLARACAKVTGL 236
               +A A  +  G+
Sbjct: 228 PVKDIAEAIGRRLGV 242

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 40/234 (17%)

Query: 14  LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
           LL   G +V   TR   +P A+ L     +            +GD  D + ++++L  KG
Sbjct: 18  LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65

Query: 73  FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTV 123
              V+           DE+     ++DA     ++ F++ S   V   +  +PH      
Sbjct: 66  VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH------ 119

Query: 124 DPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGS 182
                   K   E  + + G+  T LRP +       N +      +++ G   + +P  
Sbjct: 120 -----FDSKAEVEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLD 170

Query: 183 GIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTG 235
                 +  V D+  A   +  +  K + +   ++G++  T + +A A +KV G
Sbjct: 171 PDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLG 223

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 47/242 (19%), Positives = 73/242 (30%), Gaps = 68/242 (28%)

Query: 2   GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G T   G      +V+E    GH+VT   R  A +                 K+  ++GD
Sbjct: 6   GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
             D + VK +L  +G D V    G   D             I+ A+      + I    A
Sbjct: 50  VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP----------VY 153
           G       +       + P +  +   +      VL   G++WT++RP           Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167

Query: 154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
               L  +                   GS I         DLA   +  L   +  R+  
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205

Query: 214 NI 215
            I
Sbjct: 206 TI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 39/253 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G +  IG  ++R L + G  V L +R G       LPG   +  A           D  D
Sbjct: 6   GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51

Query: 61  YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
              V +  +A+G DV+Y        R  +   P+++     A  N  + +   +  +Y  
Sbjct: 52  ASSVIA--AARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109

Query: 112 SDLLPHCETDTVDPKSRHKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEE 165
               P  E     P +R KG++     E +L +     +    +R    YGP   N    
Sbjct: 110 QAGSPITEDTPFQPTTR-KGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS--- 165

Query: 166 WFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           W    L A   G+    PG+     +  ++ D+ARA V +     A  + +++ G   +T
Sbjct: 166 WLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAIT 225

Query: 223 FDGLARACAKVTG 235
              L    A+  G
Sbjct: 226 TRELIAIAARAAG 238

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 17/151 (11%)

Query: 97  LEQFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKG---KLNTESVLES-----KGVNW 146
           + + +  SS  VY     +  P  E   +           K   E +L         +N 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
           T LRP  I GP   N      F    + R +P+PG      Q  H  D+ARA   VL   
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARAL--VLAVR 214

Query: 207 KASRQVFNISGEKYVTFDGLARACAKVTGLL 237
             +  +FN++G+  V    +     +    L
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALLGRRPVPL 245

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 43.3 bits (103), Expect = 6e-05
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 140 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195
            + G+     R    YGP  +     P+   F      G+P+PI G G+ V    +V+D 
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222

Query: 196 ARAFVQVLGNEKASRQVFNISGE 218
           ARA   VL  +    +++NI G 
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGG 244

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 43.2 bits (102), Expect = 7e-05
 Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 56/274 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L  EGH V    RG A            +  EF         D ++ 
Sbjct: 7   GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
           +    +    G D V+    D+ G    +    +    N               +E+F++
Sbjct: 56  ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 103 CSSAGVY-----LKSDLLPHCETDTVDPKSRHKG----KLNTESVL----ESKGVNWTSL 149
            SSA VY     L++ ++   E D   P          KL TE +     E  G+    +
Sbjct: 114 ASSACVYPEFKQLETTVVRLREED-AWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIV 172

Query: 150 RPVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201
           R   IYGP   ++   E     +       K G    I G G+Q     ++ D      +
Sbjct: 173 RFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRR 232

Query: 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           ++  E    +  N+  ++ V+ + LA      +G
Sbjct: 233 LM--ESDFGEPVNLGSDEMVSMNELAEMVLSFSG 264

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 34/242 (14%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T  +G  +   L+   G  VT+ TR  +         S  EF     K+  +  D   
Sbjct: 6   GATGTLGGPIVSALLASPGFTVTVLTRPSST--------SSNEFQPSGVKV--VPVDYAS 55

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP-ILDALPNLEQFIYCSSAGV--YLKSDL-LP 116
           ++ + ++L  KG D V    G  A   +  ++DA           +AGV  ++ S+  + 
Sbjct: 56  HESLVAAL--KGVDAVISALGGAAIGDQLKLIDA---------AIAAGVKRFIPSEFGVD 104

Query: 117 HCETDTVDPKSRHKGKLNTESVLESK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           +     +        K +    L +K  G+ WT    V     L+Y  +E  F     A 
Sbjct: 105 YDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTY---VSTGMFLDY-LLEPLFGVVDLAN 160

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKV 233
           R   I G G        ++D+ RA  + L + ++   +V  ++G+  VT + L     +V
Sbjct: 161 RTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAGD-VVTQNELIALVERV 219

Query: 234 TG 235
           TG
Sbjct: 220 TG 221

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 36/240 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
           GG   IG  L   L++ GHQV +   F  G+       P  +            D+ F +
Sbjct: 7   GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66

Query: 47  FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
           F    ++H     KD D + + +L+    +VV   N  +A +          +++ IY  
Sbjct: 67  FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115

Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
           +A  Y LK    P   +     P S +   K   E  LE  GV++ + R   + GP N  
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175

Query: 162 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKY 220
                F+ RLKAG+   +  +         VKDLAR   + L +       ++  SGE  
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 57/281 (20%), Positives = 99/281 (35%), Gaps = 49/281 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GGT F+G  L + L++ G +V +  R ++   A +   E+  E          L+GD   
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60

Query: 61  YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
            +     LS       A   D V      YD      +A        E +L+    L+  
Sbjct: 61  PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 100 -FIYCSSAGVY-LKSDLLPHCETDTVDP------KSRHKGKLNTESVLESKGVNWTSLRP 151
            F Y S+A V   +   +   E +          +S+ + +    +   +  +  T  RP
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA--AATQIPLTVYRP 175

Query: 152 VYIYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
             + G              E    + L K GR +P+PG+      L  V  +A A V + 
Sbjct: 176 SIVVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNL 244
              +A+ Q+F+++     T   +A              L +
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLM 274

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 41/263 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG++V +     +   + +  E + +   F      +K D  D 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
                 ++ K  D V+      D+     D   P +D                   +++ 
Sbjct: 60  ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK----GVNWTSLRPVYIY 155
           ++ SS+ VY ++ ++P  E     P S +   KL  E+++ +     G      R   I 
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 156 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
           GP + + V   F ++LK   P  + + G G Q     +V D   A +           +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232

Query: 214 NISGEKYVTFDGLARACAKVTGL 236
           N+  +  ++ + +A    +  GL
Sbjct: 233 NLGNDDTISVNEIAEIVIEELGL 255

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 11/103 (10%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 192
           G +  S  P  +YGP +    E           FH  KA G P  +  GSG  + +  HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208

Query: 193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
            DLA A V ++     +  V N+     VT   LA    +V G
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVG 250

Length = 306

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 39.5 bits (93), Expect = 8e-04
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 116 PHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
           P+ E D  +P + + K KL  E  + +    +  LR  ++YG L    N VE W      
Sbjct: 115 PYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFVE-WMLRLAA 173

Query: 173 AGRPI----PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLA 227
             + +       GS        +  DLA A ++++  E+ S   ++++S    ++    A
Sbjct: 174 ERKEVNVVHDQIGSPT------YAADLADAILELI--ERNSLTGIYHLSNSGPISKYEFA 225

Query: 228 RACAKVTGLLD 238
           +  A   GL D
Sbjct: 226 KLIADALGLPD 236

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
          GGT FIG  L+R L   GH+V + +R +   A+ L   
Sbjct: 6  GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 116 PHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           P+ E D   P +   + KL  E  + +       LR  ++YG    N V+          
Sbjct: 110 PYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK-TMLRLAAER 168

Query: 175 RPIPIPGSGIQVT-QLG---HVKDLARAFVQVLG---NEKASRQVFNISGEKYVTFDGLA 227
             + +      V  QLG     +DLA A + ++       A    ++++G    ++   A
Sbjct: 169 DELRV------VDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFA 222

Query: 228 RACAKVTG 235
           RA     G
Sbjct: 223 RAIFDEAG 230

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199
           G+     R    YGP  Y   E+          AG+P+P+ G G QV    +V+D  RA 
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226

Query: 200 VQVLGNEKA-SRQVFNISGEKYVT 222
             VL  EK    + +NI G    T
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERT 248

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 63/280 (22%), Positives = 91/280 (32%), Gaps = 93/280 (33%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L++ L K GH+VT+ TR   P A     E  + +A   +  L         
Sbjct: 5   GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
                    +G D V ++ G      EPI D                        A+   
Sbjct: 55  ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99

Query: 98  EQ----FIYCSSAGVYLKSDLLPHCETDTVDPK-------------SRHKGKLNTES--- 137
           EQ    FI  S+ G Y  S+   + E D+                 ++    L T     
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159

Query: 138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
               VL  KG     +   +  G                 G P+   GSG Q     H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200

Query: 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
           DL +  +  L N   S    N +  + V     A+A A+ 
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARA 239

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 55/253 (21%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            G T  IG  ++  L++ G  V    R     A           A   ++++   GD  D
Sbjct: 4   TGATGRIGSKVATTLLEAGRPVRALVRSDERAA---------ALAARGAEVV--VGDLDD 52

Query: 61  YDFVKSSLSAKGFDVVY---------DINGREADEVEPILDALPN--LEQFIYCSSAGVY 109
              + ++L   G D V+         D         E    AL    +++ +  SS G  
Sbjct: 53  PAVLAAAL--AGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGAD 110

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH 169
            +S       +  +      +G    E VL   G+    LRP +         +E     
Sbjct: 111 PES------PSGLI------RGHWLMEQVLNWAGLPVVHLRPAWF--------MENLLSQ 150

Query: 170 R---LKAGR-PIPIPGSGIQVTQLGHV--KDLARAFVQVLGN-EKASRQVFNISGEKYVT 222
                KAG   +P PG G    +L  +   D+AR   ++L + E    +V+ ++G + +T
Sbjct: 151 APSIRKAGVLALPFPGDG----RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206

Query: 223 FDGLARACAKVTG 235
            + +A A ++V G
Sbjct: 207 MNEIAAALSRVLG 219

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 166 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISG 217
           +F      G+P+ I G G  QV  + H  DL   +++   N    + +VFNI G
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG 269

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 2  GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
          GGT R +   L+  LV  GH+VTLF    ++  AP+   +P     +             
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75

Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
                  + +L+A  FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPL 158
            ++ S+  V+      P+ ETDT +P +   + KL  E  + + G     LR  ++YG  
Sbjct: 95  LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154

Query: 159 NYNPVEEWFFHRLKAGRPIPIP----GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
             N V+       K G+ + +     GS        + +DLA A +++L  EK    V++
Sbjct: 155 GNNFVK-TMLRLAKEGKELKVVDDQYGSPT------YTEDLADAILELLEKEKEGG-VYH 206

Query: 215 ISGEKYVTFDGLARACAKVTGL 236
           +      ++   A+A  +  G+
Sbjct: 207 LVNSGECSWYEFAKAIFEEAGV 228

Length = 281

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 59/269 (21%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           FIG  L   LV++G++V  F       +    G  D    E   KI  + GD +D D V+
Sbjct: 9   FIGSHLVEALVRQGYEVRAFVLYN---SFNSWGWLDTSPPEVKDKIEVVTGDIRDPDSVR 65

Query: 66  SSLSAKGFDVVY---------------------DINGREADEVEPILDALPNLEQFIYCS 104
            ++  KG DVV+                     ++ G   + ++   D    +E+ ++ S
Sbjct: 66  KAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDL--GVEKVVHTS 120

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRHKG-KLNT----ESVLESKGVNWTSLRPVYIYGPLN 159
           ++ VY  +  +P  E   +  +S +   K+       S   S     T +RP   YGP  
Sbjct: 121 TSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPFNTYGP-- 178

Query: 160 YNPVEEWFFHRLKAGRPIP-IPG---SGIQVTQLG---------HVKDLARAFVQVLGNE 206
                     R  A   IP I     SG +  +LG         +V D  R F+ +  ++
Sbjct: 179 ----------RQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESD 228

Query: 207 KASRQVFNISGEKYVTFDGLARACAKVTG 235
           K   +V NI     ++     +  A++ G
Sbjct: 229 KTVGEVINIGSNFEISIGDTVKLIAEIMG 257

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.98
CHL00194	317	ycf39 Ycf39; Provisional	99.98
PLN02653	340	GDP-mannose 4,6-dehydratase	99.98
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.98
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.98
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.98
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PLN02240	352	UDP-glucose 4-epimerase	99.97
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.97
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.97
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
PRK05865	854	hypothetical protein; Provisional	99.94
PLN02583	297	cinnamoyl-CoA reductase	99.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.92
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.91
PRK12320	699	hypothetical protein; Provisional	99.91
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.9
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.88
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.81
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.8
PRK06482	276	short chain dehydrogenase; Provisional	99.8
PRK09135	249	pteridine reductase; Provisional	99.79
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.78
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.76
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.76
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.75
PRK05875	276	short chain dehydrogenase; Provisional	99.75
PRK07806	248	short chain dehydrogenase; Provisional	99.74
COG2910	211	Putative NADH-flavin reductase [General function p	99.74
PRK08263	275	short chain dehydrogenase; Provisional	99.74
PRK07774	250	short chain dehydrogenase; Provisional	99.73
PRK07074	257	short chain dehydrogenase; Provisional	99.72
PRK12828	239	short chain dehydrogenase; Provisional	99.72
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.72
PRK07067	257	sorbitol dehydrogenase; Provisional	99.71
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK06914	280	short chain dehydrogenase; Provisional	99.71
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.7
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK06138	252	short chain dehydrogenase; Provisional	99.7
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.69
PRK06128	300	oxidoreductase; Provisional	99.69
PRK12746	254	short chain dehydrogenase; Provisional	99.69
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.69
PRK07775	274	short chain dehydrogenase; Provisional	99.68
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.68
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.68
PRK06180	277	short chain dehydrogenase; Provisional	99.68
PRK12827	249	short chain dehydrogenase; Provisional	99.67
PRK09186	256	flagellin modification protein A; Provisional	99.67
PRK12829	264	short chain dehydrogenase; Provisional	99.67
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK06182	273	short chain dehydrogenase; Validated	99.67
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.66
PRK06701	290	short chain dehydrogenase; Provisional	99.66
PRK06123	248	short chain dehydrogenase; Provisional	99.66
PRK07577	234	short chain dehydrogenase; Provisional	99.66
PRK08219	227	short chain dehydrogenase; Provisional	99.65
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.65
PRK07060	245	short chain dehydrogenase; Provisional	99.65
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.65
PRK07041	230	short chain dehydrogenase; Provisional	99.64
PRK05876	275	short chain dehydrogenase; Provisional	99.64
PRK07890	258	short chain dehydrogenase; Provisional	99.64
PRK12939	250	short chain dehydrogenase; Provisional	99.64
PRK12937	245	short chain dehydrogenase; Provisional	99.64
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.63
PRK06194	287	hypothetical protein; Provisional	99.63
PRK05993	277	short chain dehydrogenase; Provisional	99.63
PRK08628	258	short chain dehydrogenase; Provisional	99.63
PRK06523	260	short chain dehydrogenase; Provisional	99.62
PRK08324	681	short chain dehydrogenase; Validated	99.62
PRK06181	263	short chain dehydrogenase; Provisional	99.62
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.62
PRK06114	254	short chain dehydrogenase; Provisional	99.61
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.61
PRK10538	248	malonic semialdehyde reductase; Provisional	99.61
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK09134	258	short chain dehydrogenase; Provisional	99.6
PRK06841	255	short chain dehydrogenase; Provisional	99.6
PRK07825	273	short chain dehydrogenase; Provisional	99.6
PRK05717	255	oxidoreductase; Validated	99.6
PRK06398	258	aldose dehydrogenase; Validated	99.6
PRK07985	294	oxidoreductase; Provisional	99.6
PRK06196	315	oxidoreductase; Provisional	99.6
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.6
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
KOG2774	366	consensus NAD dependent epimerase [General functio	99.59
PRK06500	249	short chain dehydrogenase; Provisional	99.59
PRK12743	256	oxidoreductase; Provisional	99.59
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.59
PRK09291	257	short chain dehydrogenase; Provisional	99.59
PRK08017	256	oxidoreductase; Provisional	99.59
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PLN02253	280	xanthoxin dehydrogenase	99.58
PRK08643	256	acetoin reductase; Validated	99.57
PRK06179	270	short chain dehydrogenase; Provisional	99.57
PRK12742	237	oxidoreductase; Provisional	99.57
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.57
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.57
PRK07478	254	short chain dehydrogenase; Provisional	99.57
PRK07069	251	short chain dehydrogenase; Validated	99.57
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.56
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK08265	261	short chain dehydrogenase; Provisional	99.56
PRK12744	257	short chain dehydrogenase; Provisional	99.56
PRK06483	236	dihydromonapterin reductase; Provisional	99.56
PRK07326	237	short chain dehydrogenase; Provisional	99.56
PRK07856	252	short chain dehydrogenase; Provisional	99.56
PRK06949	258	short chain dehydrogenase; Provisional	99.55
PRK07063	260	short chain dehydrogenase; Provisional	99.55
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.55
PRK12747	252	short chain dehydrogenase; Provisional	99.55
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.55
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.55
PRK08339	263	short chain dehydrogenase; Provisional	99.55
PRK07024	257	short chain dehydrogenase; Provisional	99.55
PRK07454	241	short chain dehydrogenase; Provisional	99.54
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.54
PRK06101	240	short chain dehydrogenase; Provisional	99.54
PRK09242	257	tropinone reductase; Provisional	99.54
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.54
PRK05650	270	short chain dehydrogenase; Provisional	99.54
PRK07814	263	short chain dehydrogenase; Provisional	99.54
PRK07109	334	short chain dehydrogenase; Provisional	99.53
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.53
PRK08264	238	short chain dehydrogenase; Validated	99.53
PRK05867	253	short chain dehydrogenase; Provisional	99.52
PRK06057	255	short chain dehydrogenase; Provisional	99.52
PRK06172	253	short chain dehydrogenase; Provisional	99.52
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.52
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.52
PRK07035	252	short chain dehydrogenase; Provisional	99.52
PRK08589	272	short chain dehydrogenase; Validated	99.51
PRK08226	263	short chain dehydrogenase; Provisional	99.51
PRK05693	274	short chain dehydrogenase; Provisional	99.51
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.51
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.5
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.5
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.5
PRK07677	252	short chain dehydrogenase; Provisional	99.5
PRK07831	262	short chain dehydrogenase; Provisional	99.49
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.49
PRK07904	253	short chain dehydrogenase; Provisional	99.48
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.48
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.48
PRK07102	243	short chain dehydrogenase; Provisional	99.47
PRK08267	260	short chain dehydrogenase; Provisional	99.47
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.47
PRK07576	264	short chain dehydrogenase; Provisional	99.47
PRK06198	260	short chain dehydrogenase; Provisional	99.46
PRK06484	520	short chain dehydrogenase; Validated	99.46
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.46
PRK05866	293	short chain dehydrogenase; Provisional	99.46
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.46
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.46
PRK06924	251	short chain dehydrogenase; Provisional	99.46
PRK06197	306	short chain dehydrogenase; Provisional	99.45
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.45
PRK06139	330	short chain dehydrogenase; Provisional	99.45
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.45
PRK07023	243	short chain dehydrogenase; Provisional	99.44
PRK07062	265	short chain dehydrogenase; Provisional	99.44
PRK08278	273	short chain dehydrogenase; Provisional	99.44
PRK08251	248	short chain dehydrogenase; Provisional	99.43
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
PRK05872	296	short chain dehydrogenase; Provisional	99.42
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.41
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.4
PRK06125	259	short chain dehydrogenase; Provisional	99.39
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.38
PRK07578	199	short chain dehydrogenase; Provisional	99.38
PRK07201	657	short chain dehydrogenase; Provisional	99.38
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.38
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.38
PRK09072	263	short chain dehydrogenase; Provisional	99.36
PRK08177	225	short chain dehydrogenase; Provisional	99.36
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.36
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.36
PRK06940	275	short chain dehydrogenase; Provisional	99.36
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.35
PRK05884	223	short chain dehydrogenase; Provisional	99.35
PRK06953	222	short chain dehydrogenase; Provisional	99.34
PRK05855	582	short chain dehydrogenase; Validated	99.34
PRK07832	272	short chain dehydrogenase; Provisional	99.34
PRK08703	239	short chain dehydrogenase; Provisional	99.34
PRK05854	313	short chain dehydrogenase; Provisional	99.33
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.32
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.32
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.31
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.31
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.29
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.27
PRK07791	286	short chain dehydrogenase; Provisional	99.26
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.26
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.26
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.25
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.25
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.23
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.23
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.23
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.23
PRK12367	245	short chain dehydrogenase; Provisional	99.22
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.21
PRK06484	520	short chain dehydrogenase; Validated	99.2
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.19
PRK05599	246	hypothetical protein; Provisional	99.16
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.15
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.12
PLN02780	320	ketoreductase/ oxidoreductase	99.1
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.1
PLN00015	308	protochlorophyllide reductase	99.06
PRK08862	227	short chain dehydrogenase; Provisional	99.03
KOG0725	270	consensus Reductases with broad range of substrate	99.0
PRK08303	305	short chain dehydrogenase; Provisional	98.99
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.95
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.94
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.91
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.88
KOG1208	314	consensus Dehydrogenases with different specificit	98.86
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.81
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.8
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.8
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.76
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.74
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.69
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.65
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.62
PRK08309	177	short chain dehydrogenase; Provisional	98.54
COG1028	251	FabG Dehydrogenases with different specificities (	98.48
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.46
PRK09620	229	hypothetical protein; Provisional	98.39
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.33
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.31
PRK06720	169	hypothetical protein; Provisional	98.3
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.29
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.22
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.01
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.97
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.87
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.82
PTZ00325	321	malate dehydrogenase; Provisional	97.78
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.71
PLN00106	323	malate dehydrogenase	97.69
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.66
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.65
COG3268	382	Uncharacterized conserved protein [Function unknow	97.59
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.57
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.45
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.44
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.39
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.1
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.88
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.86
PRK05086	312	malate dehydrogenase; Provisional	96.84
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.79
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.75
PRK14982	340	acyl-ACP reductase; Provisional	96.74
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.56
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.55
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.47
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.4
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.29
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.23
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.19
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.16
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.02
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.95
PRK09496	453	trkA potassium transporter peripheral membrane com	95.9
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.83
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.76
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.73
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	95.69
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.65
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.65
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.6
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.58
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.57
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.56
PRK04148	134	hypothetical protein; Provisional	95.55
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.49
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.46
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.42
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.25
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.24
PLN02383	344	aspartate semialdehyde dehydrogenase	95.24
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.23
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.23
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.21
PRK09496	453	trkA potassium transporter peripheral membrane com	95.2
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.2
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.17
PRK10669	558	putative cation:proton antiport protein; Provision	95.16
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.15
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.13
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.09
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.06
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.02
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.95
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.93
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.87
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.82
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	94.8
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.78
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.76
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.64
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.62
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.57
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.56
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.53
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.49
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.38
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.34
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	94.32
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.22
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	94.22
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	94.19
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	94.1
PRK06436	303	glycerate dehydrogenase; Provisional	94.08
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	94.08
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	94.08
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.08
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	94.05
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.02
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	94.0
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	93.94
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	93.92
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	93.9
PRK08328	231	hypothetical protein; Provisional	93.83
PLN02494	477	adenosylhomocysteinase	93.83
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	93.83
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.8
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.79
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	93.73
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	93.7
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.68
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	93.67
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	93.67
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.65
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	93.63
PRK08223	287	hypothetical protein; Validated	93.53
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	93.52
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	93.46
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	93.39
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.38
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	93.35
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	93.33
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.31
PRK13243	333	glyoxylate reductase; Reviewed	93.31
PRK15116	268	sulfur acceptor protein CsdL; Provisional	93.3
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.29
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	93.24
PLN02586	360	probable cinnamyl alcohol dehydrogenase	93.21
PRK08655	437	prephenate dehydrogenase; Provisional	93.19
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	93.17
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	93.16
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.12
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	93.09
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	93.09
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.08
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.06
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	92.99
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	92.96
PTZ00075	476	Adenosylhomocysteinase; Provisional	92.93
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	92.91
PRK12480	330	D-lactate dehydrogenase; Provisional	92.88
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	92.82
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	92.77
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	92.72
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.7
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	92.67
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	92.66
PLN02928	347	oxidoreductase family protein	92.64
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	92.58
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	92.57
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	92.55
PRK10537	393	voltage-gated potassium channel; Provisional	92.53
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.42
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.41
PRK07574	385	formate dehydrogenase; Provisional	92.38
PRK06487	317	glycerate dehydrogenase; Provisional	92.37
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.35
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	92.3
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	92.29
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	92.23
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	92.19
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	92.17
COG4091	438	Predicted homoserine dehydrogenase [Amino acid tra	92.15
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	92.11
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	92.07
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	92.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	91.88
PRK03562	621	glutathione-regulated potassium-efflux system prot	91.88
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	91.87
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	91.78
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	91.77
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	91.69
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	91.67
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	91.64
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	91.58
COG2130	340	Putative NADP-dependent oxidoreductases [General f	91.56
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	91.31
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	91.23
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	91.22
PRK07411	390	hypothetical protein; Validated	91.21
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	91.19
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	91.11
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	91.1
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.1
PRK05442	326	malate dehydrogenase; Provisional	91.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	90.86
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	90.81
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	90.67
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.5
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	90.47
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	90.44
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	90.44
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	90.43
PLN02178	375	cinnamyl-alcohol dehydrogenase	90.41
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	90.4
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	90.4
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	90.17
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	90.14
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	90.03
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	90.03
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	89.98
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	89.98
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	89.93
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	89.92
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	89.9
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	89.88
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	89.87
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	89.8
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	89.73
PLN02514	357	cinnamyl-alcohol dehydrogenase	89.66
PLN02688	266	pyrroline-5-carboxylate reductase	89.64
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	89.56

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-37  Score=237.47  Aligned_cols=240  Identities=23%  Similarity=0.273  Sum_probs=199.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||++.+.+|++.|++|+++++-.......+..          ..++++++|+.|.+.+.++|++.++|.|||+|
T Consensus         6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            79999999999999999999999999887774444331          12789999999999999999999999999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~----------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      |.                |+.++.+|+++|+  ++++|||.||+.+||.+...|+.|+.+..|.+.| ++|.++|++++ 
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence            86                4567999999988  9999999999999999999999999999999888 99999999985 


Q ss_pred             ---hcCCceeEeecceeeCCCC----------CCchhHHHHHHHHcCCc-ccCCC------CCCceeeeeeHHHHHHHHH
Q 024575          141 ---SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRP-IPIPG------SGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~~~D~a~~~~  200 (265)
                         ..+++++++|..++.|...          -..+++...+.+....+ +.++|      ||.-.||+||+.|+|++.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence               4689999999999998431          23445555555544333 44444      5566799999999999999


Q ss_pred             HHhcCcc--ccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCcccc
Q 024575          201 QVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTL  254 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  254 (265)
                      .+++.-.  ....+||+++|...|+.|++++++++.|++.    +++..+-++.+.
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~i----p~~~~~RR~GDp  287 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDI----PVEIAPRRAGDP  287 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcC----ceeeCCCCCCCC
Confidence            9886422  2236999999999999999999999999998    777666665554

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=8.6e-37  Score=252.55  Aligned_cols=234  Identities=19%  Similarity=0.204  Sum_probs=187.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++|+++|+++|++|++++|........+.......-.....++.++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA   98 (348)
T PRK15181         21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA   98 (348)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence            799999999999999999999999998754321111100000000001467899999999999999998  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..                ..++.+++++|+  ++++|||+||..+||.....+..|+.+..|.+.| .+|..+|.+++ 
T Consensus        99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181         99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence            852                335778999988  7899999999999997666667777777777767 99999999874 


Q ss_pred             ---hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc--ccC
Q 024575          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  210 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~  210 (265)
                         +.+++++++||+++|||++.     ..+++.++..+..++++.+++++.+.++|+|++|+|++++.++..+.  ..+
T Consensus       179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  258 (348)
T PRK15181        179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258 (348)
T ss_pred             HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence               45899999999999999753     23567777778888888888999999999999999999988775432  346


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      ++||+++++.+|+.|+++.+.+.++.
T Consensus       259 ~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        259 KVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             CEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            89999999999999999999999974

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.7e-36  Score=227.80  Aligned_cols=240  Identities=22%  Similarity=0.268  Sum_probs=202.4

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||.||||+++++.++++.  .+|+.++.=.-.. .+.+..      ....++..++++|+.|.+.+.+++++.++|+|+
T Consensus         6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~------~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD------VEDSPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh------hhcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            7999999999999999974  4567766533221 111110      111468999999999999999999988899999


Q ss_pred             EcCCC----------------CccchHHHHHhCC--CC-CcEEEEecceeeecCCCC--CCCCCCCCCccccc-cchhhH
Q 024575           78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNT  135 (265)
Q Consensus        78 ~~a~~----------------~~~~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~--~~~e~~~~~~~~~~-~~k~~~  135 (265)
                      |+|+.                |+.++.+|+++++  .. .||+|+||..|||.....  .++|.++..|.++| .||+.+
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas  159 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS  159 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence            99986                3557889999988  33 499999999999976543  68999999999998 999999


Q ss_pred             HHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       136 E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      +.+++    .+|++++|.|+++-|||.++ ..+++.++..++.++++++.|+|.+.++|+|++|-|+++..++.+... |
T Consensus       160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-G  238 (340)
T COG1088         160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-G  238 (340)
T ss_pred             HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-C
Confidence            98874    58999999999999999875 568899999999999999999999999999999999999999999876 9


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCcccccc----ceeeCCC
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLDFRSLN----LCTTTPK  250 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~----~~~~~~~  250 (265)
                      ++|||+++...+..|+++.|++.+|+..   +.    +.++...
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~---~~~~~li~~V~DR  279 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDK---PDYRDLITFVEDR  279 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCccc---cchhhheEeccCC
Confidence            9999999999999999999999999987   21    6666554

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1.6e-35  Score=247.48  Aligned_cols=238  Identities=57%  Similarity=0.966  Sum_probs=192.6

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||+|++|++.|++.||+|++++|+.... ..+.......+..+ ..+++++.+|+.|   +.+++...++|+|||++
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~  138 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPS-QKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN  138 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcch-hhhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence            9999999999999999999999999987652 21211111111111 2468999999877   44445434899999999


Q ss_pred             CCCccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeecceeeCCC
Q 024575           81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  158 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~~~i~g~~  158 (265)
                      +.....+.+++++++  ++++|||+||.++|+.....+..|.++..|..   +|..+|.++++.+++++++||+++|||+
T Consensus       139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence            888888999999987  88999999999999876666677766655543   7999999999999999999999999998


Q ss_pred             CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ....+..+++..+..++++.+++++.+.++++|++|+|+++..+++++...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            66556667777788888888788888999999999999999999988765678999999999999999999999999887


Q ss_pred             cccccceeeCCC
Q 024575          239 FRSLNLCTTTPK  250 (265)
Q Consensus       239 ~~~~~~~~~~~~  250 (265)
                          ++...++.
T Consensus       296 ----~i~~~~~~  303 (378)
T PLN00016        296 ----EIVHYDPK  303 (378)
T ss_pred             ----ceeecCcc
Confidence                55544443

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=5.8e-34  Score=227.32  Aligned_cols=226  Identities=23%  Similarity=0.338  Sum_probs=178.6

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCcccc-CCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||+||+|++|+++|+++|  ++|+++++.+..... .+..         ....+++.+|++|.+++.++++  ++|+||
T Consensus         3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---------~~~~~~~~~Di~d~~~l~~a~~--g~d~V~   71 (280)
T PF01073_consen    3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---------SGVKEYIQGDITDPESLEEALE--GVDVVF   71 (280)
T ss_pred             EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---------ccceeEEEeccccHHHHHHHhc--CCceEE
Confidence            7999999999999999999  799999988766321 1111         1233499999999999999999  999999


Q ss_pred             EcCCC---------------CccchHHHHHhCC--CCCcEEEEecceeeecC-CCCCC---CCCCCC--Cccccc-cchh
Q 024575           78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPH---CETDTV--DPKSRH-KGKL  133 (265)
Q Consensus        78 ~~a~~---------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~-~~~~~---~e~~~~--~~~~~~-~~k~  133 (265)
                      |+|+.               |+.++++++++|+  ++++|||+||.++++.. .+.++   +|..+.  .+...| .+|.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            99875               3567999999988  99999999999999862 22222   233322  234456 9999


Q ss_pred             hHHHHHhh---------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          134 NTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       134 ~~E~~~~~---------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      .+|+++.+         ..++.++|||+.||||++.. +.+.+......+......+++....++++++|+|.+++.+.+
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            99998743         13899999999999997533 445556666666555666888888999999999999987753


Q ss_pred             ---C----ccccCceEEecCCCccC-HHHHHHHHHHHhCCCc
Q 024575          205 ---N----EKASRQVFNISGEKYVT-FDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ---~----~~~~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~  238 (265)
                         +    ....|+.|+|++++++. +.|++..+.+.+|.+.
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~  272 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPP  272 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCC
Confidence               2    23578999999999999 9999999999999987

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.5e-33  Score=233.49  Aligned_cols=226  Identities=19%  Similarity=0.279  Sum_probs=180.2

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC-ChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||+|++|+++|+++ |++|++++|+.........          ..+++++.+|+. +.+.+.++++  ++|+|||
T Consensus         7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH   74 (347)
T PRK11908          7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP   74 (347)
T ss_pred             ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999987 6999999986543211111          246899999997 6777888888  8999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC-------Cccccc-cchh
Q 024575           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (265)
                      +|+..                ..++.+++++|+ ..++|||+||..+||.....+.+|+...       .|.+.| .+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            98752                234678899887 4489999999999997655556655432       344456 9999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCC---------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|++++    +.+++++++||+++|||+..         .+++..++..+..++++.+++++++.++|+|++|++++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            9999874    46899999999999999742         2456677778888887777788889999999999999999


Q ss_pred             HHhcCcc--ccCceEEecCC-CccCHHHHHHHHHHHhCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~  238 (265)
                      .+++++.  ..++.||++++ ..+|+.|+++.+.+.+|...
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            9998753  35789999987 57999999999999999643

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=3.1e-33  Score=236.77  Aligned_cols=236  Identities=19%  Similarity=0.236  Sum_probs=176.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc------cCCCCC--ChhHHh---h-hhccceEEEecCCChHHHHHHh
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA------QQLPGE--SDQEFA---E-FSSKILHLKGDRKDYDFVKSSL   68 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~------~~~~~~--~~~~~~---~-~~~~~~~~~~D~~~~~~~~~~~   68 (265)
                      |||+||||++|+++|+++|++|++++|......      ..+...  ....+.   . ...+++++.+|++|.+.+.+++
T Consensus        53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l  132 (442)
T PLN02572         53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF  132 (442)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence            799999999999999999999999875432110      000000  000110   0 0136899999999999999999


Q ss_pred             hccCccEEEEcCCCC-------------------ccchHHHHHhCC--CCC-cEEEEecceeeecCCCCCCCC-------
Q 024575           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCE-------  119 (265)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~l~~~~~--~~~-~~v~~Ss~~~~~~~~~~~~~e-------  119 (265)
                      +..++|+|||+|+..                   ..++.+++++++  +++ +||++||..+||... .+.+|       
T Consensus       133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~  211 (442)
T PLN02572        133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITH  211 (442)
T ss_pred             HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCccccccccc
Confidence            866799999999641                   224667888877  665 899999999998642 12222       


Q ss_pred             ----C---CCCCccccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCCC------------------chhHHHHH
Q 024575          120 ----T---DTVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH  169 (265)
Q Consensus       120 ----~---~~~~~~~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~------------------~~~~~~~~  169 (265)
                          +   .+..|.+.| .+|..+|.+++    +.+++++++||+++|||++..                  ..+..++.
T Consensus       212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~  291 (442)
T PLN02572        212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV  291 (442)
T ss_pred             ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence                2   144566666 99999998873    459999999999999997432                  34455666


Q ss_pred             HHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC--ceEEecCCCccCHHHHHHHHHHH---hCCCc
Q 024575          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGLLD  238 (265)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~i~~~~~~s~~el~~~i~~~---~g~~~  238 (265)
                      .+..++++.+++++++.++|+|++|++++++.+++++...+  .+||+++ +.+|+.|+++.+++.   +|.+.
T Consensus       292 ~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~  364 (442)
T PLN02572        292 QAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDV  364 (442)
T ss_pred             HHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCC
Confidence            77778878888999999999999999999999998653333  5899976 679999999999999   88765

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2e-33  Score=235.78  Aligned_cols=230  Identities=20%  Similarity=0.232  Sum_probs=175.3

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++|+++|+++ |++|++++|+........... .   .....+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~-~---~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl   93 (386)
T PLN02427         20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD-T---VPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL   93 (386)
T ss_pred             ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc-c---ccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence            799999999999999998 599999998755421111000 0   0002468999999999999999998  89999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC-------------------
Q 024575           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------------------  123 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-------------------  123 (265)
                      |+..                ..++.+++++|+ ..++|||+||..+||.....+..|+.+.                   
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~  173 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG  173 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence            9842                123567788876 4489999999999986543333332211                   


Q ss_pred             ---Cccccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCC------------CchhHHHHHHHHcCCcccCCCCC
Q 024575          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG  183 (265)
Q Consensus       124 ---~~~~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  183 (265)
                         .+.+.| .+|..+|.++.    ..+++++++||+++|||+..            ..++..++..+..++++.+++++
T Consensus       174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  253 (386)
T PLN02427        174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG  253 (386)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence               122345 99999999984    35899999999999999742            12344455666777777777888


Q ss_pred             CceeeeeeHHHHHHHHHHHhcCcc-ccCceEEecCC-CccCHHHHHHHHHHHhCC
Q 024575          184 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKVTGL  236 (265)
Q Consensus       184 ~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~-~~~s~~el~~~i~~~~g~  236 (265)
                      ++.++|+|++|+|++++.+++++. ..+++||++++ +.+++.|+++.+.+.+|.
T Consensus       254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            889999999999999999998764 35679999987 589999999999999985

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1e-32  Score=229.48  Aligned_cols=223  Identities=19%  Similarity=0.238  Sum_probs=177.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||+++++.|.++||+|++++|.........           ...++++.+|+.+.+.+..++.  ++|+|||+|
T Consensus        27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   93 (370)
T PLN02695         27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA   93 (370)
T ss_pred             ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence            799999999999999999999999998654311100           1246788999999999888888  899999999


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCC----CCCCCCC--CCCccccc-cchhh
Q 024575           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN  134 (265)
Q Consensus        81 ~~~-----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~----~~~~e~~--~~~~~~~~-~~k~~  134 (265)
                      +..                 ..++.+++++|+  ++++|||+||..+|+....    .++.|++  +..|.+.| .+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            642                 224678889877  7899999999999986532    2355554  55677667 99999


Q ss_pred             HHHHHh----hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHc-CCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       135 ~E~~~~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +|.++.    +.+++++++||+++|||+..     ..+...++..+.. +..+.+++++++.++|+|++|++++++.+++
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            999863    46899999999999999642     1234556665544 4567778899999999999999999999887


Q ss_pred             CccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++.  ++.||+++++.+|+.|+++.+.+..|.+.
T Consensus       254 ~~~--~~~~nv~~~~~~s~~el~~~i~~~~g~~~  285 (370)
T PLN02695        254 SDF--REPVNIGSDEMVSMNEMAEIALSFENKKL  285 (370)
T ss_pred             ccC--CCceEecCCCceeHHHHHHHHHHHhCCCC
Confidence            653  57899999999999999999999999765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=2.2e-33  Score=220.49  Aligned_cols=206  Identities=33%  Similarity=0.488  Sum_probs=179.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|+.|+.+.|++......          ....+++++.+|+.|.+.+.++++..++|+|||+|
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----------EKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----------HHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EccCCHHHHHHHHHHHHcCCccccccccccccccc----------cccceEEEEEeeccccccccccccccCceEEEEee
Confidence            69999999999999999999999999988773111          11138899999999999999999977789999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..                ...+.+++++++  ++++||++||..+|+.....+++|+.+..|.+.| .+|...|++++ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            973                224677888877  7799999999999998877888999888888877 99999999884 


Q ss_pred             ---hcCCceeEeecceeeCCC----CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceE
Q 024575          141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (265)
                         +.+++++++||+++|||.    ....+...++..+..++++.+++++++.++++|++|+|++++.+++++...+++|
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y  233 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY  233 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence               358999999999999998    5677888999999999988888999999999999999999999999988668899


Q ss_pred             Eec
Q 024575          214 NIS  216 (265)
Q Consensus       214 ~i~  216 (265)
                      ||+
T Consensus       234 Nig  236 (236)
T PF01370_consen  234 NIG  236 (236)
T ss_dssp             EES
T ss_pred             EeC
Confidence            985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.2e-33  Score=234.44  Aligned_cols=229  Identities=21%  Similarity=0.235  Sum_probs=179.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++|++|++++|...........     .. ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus       126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-----~~-~~~~~~~~~~Di~~~~-----~~--~~D~ViHlA  192 (436)
T PLN02166        126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-----LF-GNPRFELIRHDVVEPI-----LL--EVDQIYHLA  192 (436)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-----hc-cCCceEEEECcccccc-----cc--CCCEEEECc
Confidence            79999999999999999999999999864331111110     00 0246778888886642     44  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCC-----CCCccccc-cchhhHHH
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~E~  137 (265)
                      +..                +.++.+++++|+ ...+||++||..+||+....+.+|+.     +..|.+.| .+|..+|.
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            742                234788999987 33589999999999976666666653     44555556 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      +++    ..+++++++||+++|||+..   ..++..++..+..++.+.+++++++.++|+|++|+++++..+++.+.  +
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~  350 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V  350 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence            874    45899999999999999742   45677788888888888888888999999999999999999987643  4


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeC
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      ++||+++++.+|+.|+++.+.+.+|.+.    .+.+.+
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~~----~i~~~p  384 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSSA----TIEFKP  384 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCCC----CeeeCC
Confidence            6999999999999999999999999776    555444

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=2.6e-32  Score=226.90  Aligned_cols=232  Identities=21%  Similarity=0.229  Sum_probs=181.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||+++++.|+++|++++++.++...... .....  .. ....++.++.+|++|.+++.++++..++|+|||+|
T Consensus         7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~--~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   82 (355)
T PRK10217          7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN-LMSLA--PV-AQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA   82 (355)
T ss_pred             EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc-hhhhh--hc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999886655443322111 00000  00 00135788999999999999999855699999999


Q ss_pred             CCC----------------ccchHHHHHhCC-----------CCCcEEEEecceeeecCC--CCCCCCCCCCCccccc-c
Q 024575           81 GRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD--LLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-----------~~~~~v~~Ss~~~~~~~~--~~~~~e~~~~~~~~~~-~  130 (265)
                      +..                ..++.++++++.           ++++||++||.++|+...  ..+++|+.+..|.+.| .
T Consensus        83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~  162 (355)
T PRK10217         83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA  162 (355)
T ss_pred             cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence            862                234666777753           357999999999998643  3467787777777777 9


Q ss_pred             chhhHHHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      +|..+|.+++    +.+++++++||+++|||+.. ..++..++.....++++.+++++++.++|+|++|+++++..+++.
T Consensus       163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            9999998873    46899999999999999863 356667777777777777788999999999999999999999987


Q ss_pred             ccccCceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          206 EKASRQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      +. .++.||+++++.+|+.|+++.+++.+|..
T Consensus       243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~  273 (355)
T PRK10217        243 GK-VGETYNIGGHNERKNLDVVETICELLEEL  273 (355)
T ss_pred             CC-CCCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence            54 46799999999999999999999999864

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=8.6e-33  Score=223.98  Aligned_cols=210  Identities=18%  Similarity=0.181  Sum_probs=171.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||++++++|+++| +|++++|...                      .+.+|++|.+.+.++++..++|+|||||
T Consensus         6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999 7998887532                      2357999999999999866799999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +..                ..++.+++++|+ ...+|||+||..||+.....|++|+++..|.+.| .+|..+|++++..
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            863                224667888887 3358999999999988777789999998998877 9999999999887


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCC--CCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCc
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (265)
                      ..+++++|++++|||+. .++...++..+.+++.+.++++  +.+...+...+|+++++..++..+.. +++||+++++.
T Consensus       143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~  220 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVASGT  220 (299)
T ss_pred             CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCC
Confidence            78899999999999965 3566777777777777777766  44444555667788888777765433 35999999999


Q ss_pred             cCHHHHHHHHHHHhC
Q 024575          221 VTFDGLARACAKVTG  235 (265)
Q Consensus       221 ~s~~el~~~i~~~~g  235 (265)
                      +|+.|+++.+.+.++
T Consensus       221 ~s~~e~~~~i~~~~~  235 (299)
T PRK09987        221 TTWHDYAALVFEEAR  235 (299)
T ss_pred             ccHHHHHHHHHHHHH
Confidence            999999999988654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-32  Score=208.65  Aligned_cols=244  Identities=22%  Similarity=0.290  Sum_probs=198.3

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCc-cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||.||+|++.++.+...  .++.+.++.=.-- ....+.+...      .++..++.+|+.+...+..++....+|.|+
T Consensus        12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n------~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen   12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN------SPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc------CCCceEeeccccchHHHHhhhccCchhhhh
Confidence            799999999999999987  3555555431111 0111111111      478999999999999999999988999999


Q ss_pred             EcCCC----------------CccchHHHHHhCC---CCCcEEEEecceeeecCCCCCCC-CCCCCCccccc-cchhhHH
Q 024575           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        78 ~~a~~----------------~~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~-e~~~~~~~~~~-~~k~~~E  136 (265)
                      |+|+.                ++-.+..|+++++   ++++|||+||..|||++...... |...+.|.+.| .+|.++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99886                3446778899877   78999999999999998877666 88889999998 9999999


Q ss_pred             HHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       137 ~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      .+++    +++++++++|.++||||++. ...++.|+...+.+++.++.|++.+.++++|++|+++++..++++.. .|+
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-ccc
Confidence            9884    57899999999999999874 45778888888899999999999999999999999999999999854 589


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCc---cccccceeeCCCc
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLD---FRSLNLCTTTPKS  251 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~~~~~  251 (265)
                      +|||+.....+..|+++.+++.+.+..   ...|-+..++.++
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp  287 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRP  287 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCC
Confidence            999999999999999999999987743   2223444444444

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2.3e-32  Score=242.73  Aligned_cols=225  Identities=20%  Similarity=0.219  Sum_probs=180.9

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH-HHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~d~vi~   78 (265)
                      ||||||+|++|+++|+++ ||+|++++|.+........          ..+++++.+|++|.+. +.++++  ++|+|||
T Consensus       321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH  388 (660)
T PRK08125        321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP  388 (660)
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence            799999999999999986 7999999997654221111          2478999999998665 567787  9999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC-------Cccccc-cchh
Q 024575           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (265)
                      +|+..                ..++.+++++|+ ..++|||+||..+||.....+++|+.+.       .|.+.| .+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            99752                335678889887 4489999999999997655567776542       233445 9999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCC---------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|.+++    +.+++++++||+++|||+..         ..++..++..+..++++.+++++++.++|+|++|++++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999884    45899999999999999742         2456677777777887777788899999999999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC-ccCHHHHHHHHHHHhCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLL  237 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~  237 (265)
                      .+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            9998753  346799999985 799999999999999964

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.3e-32  Score=225.11  Aligned_cols=236  Identities=17%  Similarity=0.168  Sum_probs=181.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++++++|++.|++|++++|++... ...+.............+++++.+|++|.+.+.++++..++|+|||+
T Consensus         6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~   85 (343)
T TIGR01472         6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL   85 (343)
T ss_pred             EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence            79999999999999999999999999986531 01111000000000014688999999999999999986668999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CC---CcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~---~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+..                ..++.+++++|+  ++   ++|||+||..+||.....+.+|+.+..|.+.| .+|..+|.
T Consensus        86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  165 (343)
T TIGR01472        86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW  165 (343)
T ss_pred             CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            9862                124678888876  43   38999999999997666678888888888877 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCCCc----hhHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      +++    +.++++++.|+.++|||+....    .+..++..+..++. ...++++++.++|+|++|++++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-  244 (343)
T TIGR01472       166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-  244 (343)
T ss_pred             HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-
Confidence            884    3578899999999999864322    23334445555653 3345888999999999999999999998754 


Q ss_pred             cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          209 SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       209 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                       ++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       245 -~~~yni~~g~~~s~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       245 -PDDYVIATGETHSVREFVEVSFEYIGKTL  273 (343)
T ss_pred             -CccEEecCCCceeHHHHHHHHHHHcCCCc
Confidence             35899999999999999999999999754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=3.3e-32  Score=229.98  Aligned_cols=229  Identities=20%  Similarity=0.234  Sum_probs=177.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++|++|++++|............    +  ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus       125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~----~--~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA  191 (442)
T PLN02206        125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH----F--SNPNFELIRHDVVEPI-----LL--EVDQIYHLA  191 (442)
T ss_pred             ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh----c--cCCceEEEECCccChh-----hc--CCCEEEEee
Confidence            799999999999999999999999987543211111000    0  0246788889986652     34  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCC-----CCCccccc-cchhhHHH
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~E~  137 (265)
                      +..                ..++.+++++|+ ...+||++||..+|+.....+.+|+.     +..+.+.| .+|..+|.
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            742                234678999987 33589999999999876655666653     33344556 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCC---CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      ++.    +.+++++++||+++|||+.   ...++..++.....++++.+++++++.++|+|++|++++++.++++..  +
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~  349 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V  349 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence            874    4689999999999999973   345667778888888888888899999999999999999999987653  4


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeC
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      +.||+++++.+|+.|+++.+.+.+|.+.    ++...+
T Consensus       350 g~yNIgs~~~~sl~Elae~i~~~~g~~~----~i~~~p  383 (442)
T PLN02206        350 GPFNLGNPGEFTMLELAKVVQETIDPNA----KIEFRP  383 (442)
T ss_pred             ceEEEcCCCceeHHHHHHHHHHHhCCCC----ceeeCC
Confidence            5999999999999999999999998765    554444

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=3.8e-32  Score=219.63  Aligned_cols=210  Identities=20%  Similarity=0.207  Sum_probs=176.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|+++++.|+++|++|++++|.                          .+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            6999999999999999999999999884                          35888999999999865679999999


Q ss_pred             CCCc----------------cchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +...                .++.+++++++ ...+||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++..
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            8521                23667788876 3358999999999987667788888888887777 9999999999888


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +++++++||+++|||+....+...++..+..+..+...+  ++.+++++++|+++++..+++.+...+++||+++++.++
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS  216 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence            999999999999999854556666777776666655544  367899999999999999998764457899999999999


Q ss_pred             HHHHHHHHHHHhCCCc
Q 024575          223 FDGLARACAKVTGLLD  238 (265)
Q Consensus       223 ~~el~~~i~~~~g~~~  238 (265)
                      +.|+++.+.+.+|.+.
T Consensus       217 ~~e~~~~i~~~~~~~~  232 (287)
T TIGR01214       217 WYEFAQAIFEEAGADG  232 (287)
T ss_pred             HHHHHHHHHHHhCccc
Confidence            9999999999999875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.7e-31  Score=217.57  Aligned_cols=231  Identities=22%  Similarity=0.299  Sum_probs=183.1

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||||++|++++++|++.|  ++|++++|..... ...+..     +.. ..+++++.+|++|++++.++++..++|+||
T Consensus         5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLAD-----LED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhh-----hcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999987  7899888743221 111110     000 246889999999999999999844599999


Q ss_pred             EcCCCCc----------------cchHHHHHhCC--CC-CcEEEEecceeeecCCCC-CCCCCCCCCccccc-cchhhHH
Q 024575           78 DINGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        78 ~~a~~~~----------------~~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~-~~~e~~~~~~~~~~-~~k~~~E  136 (265)
                      |+++...                .++.++++++.  .. .++|++||..+||..... +..|..+..|.+.| .+|..+|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  158 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD  158 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence            9998531                23567788766  23 389999999999865433 57777777777766 9999999


Q ss_pred             HHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       137 ~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      .+++    +.+++++++||+++|||... ..+++.++.....+..+++++++++.++|+|++|+++++..++++.. .++
T Consensus       159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~  237 (317)
T TIGR01181       159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGE  237 (317)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCc
Confidence            9874    46899999999999999753 45677778888888777777888889999999999999999998654 467


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +||+++++.+++.|+++++.+.+|.+.
T Consensus       238 ~~~~~~~~~~s~~~~~~~i~~~~~~~~  264 (317)
T TIGR01181       238 TYNIGGGNERTNLEVVETILELLGKDE  264 (317)
T ss_pred             eEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence            999999999999999999999999754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=2.7e-31  Score=216.57  Aligned_cols=212  Identities=21%  Similarity=0.232  Sum_probs=168.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|++.|++.|++|+++.+.                         ..+|+++.+++.++++..++|+|||+|
T Consensus         3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            7999999999999999999988866432                         146999999999999877899999999


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC----CCCccc-cc-cchhhH
Q 024575           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS-RH-KGKLNT  135 (265)
Q Consensus        81 ~~~-----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~----~~~~~~-~~-~~k~~~  135 (265)
                      +..                 ..++.+++++|+  ++++||++||..+|+.....+.+|++    +..|.+ .| .+|..+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            742                 224677888887  77899999999999976677788875    344443 25 999999


Q ss_pred             HHHH----hhcCCceeEeecceeeCCCCC-----CchhHHHHHH----HHcCCcccC-CCCCCceeeeeeHHHHHHHHHH
Q 024575          136 ESVL----ESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       136 E~~~----~~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      |+++    +..+++++++||+++|||+..     ..++..++..    ...+.++.. ++++++.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            9765    356899999999999999742     2333444432    234554444 6788889999999999999999


Q ss_pred             HhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++++... ++.||+++++.+++.|+++.+.+.+|.+.
T Consensus       218 ~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  253 (306)
T PLN02725        218 LMRRYSG-AEHVNVGSGDEVTIKELAELVKEVVGFEG  253 (306)
T ss_pred             HHhcccc-CcceEeCCCCcccHHHHHHHHHHHhCCCC
Confidence            9987543 45789999999999999999999999765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.4e-31  Score=237.32  Aligned_cols=231  Identities=23%  Similarity=0.332  Sum_probs=184.1

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCc-cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      ||||||||+++++.|+++  +++|++++|.... ....+..      .....+++++.+|+.|.+.+..++...++|+||
T Consensus        12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260         12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP------SKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh------cccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            799999999999999998  6899999885321 0111100      000257899999999998888777545899999


Q ss_pred             EcCCCCc----------------cchHHHHHhCC--C-CCcEEEEecceeeecCCCCC---CCCCCCCCccccc-cchhh
Q 024575           78 DINGREA----------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN  134 (265)
Q Consensus        78 ~~a~~~~----------------~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~---~~e~~~~~~~~~~-~~k~~  134 (265)
                      |+|+...                .++.+++++++  + +++|||+||..+||.....+   ..|+.+..|.+.| .+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            9998632                23677888877  4 78999999999998765432   2455566677766 99999


Q ss_pred             HHHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       135 ~E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      +|.+++    +.+++++++||+++|||++. ..+++.++..+..++.+.+++++++.++|+|++|+|+++..++++.. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999884    35899999999999999864 35667777777888888888889999999999999999999887654 3


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++||+++++.+++.|+++.+++.+|.+.
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence            67999999999999999999999999764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.98  E-value=1.1e-31  Score=218.92  Aligned_cols=219  Identities=18%  Similarity=0.167  Sum_probs=162.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HH-HHHHhhc---cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~~~---~~~   73 (265)
                      ||||||||++|+++|+++|++++++.|+......               ...+..+|+.|.   +. +..++..   .++
T Consensus         5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             ecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH---------------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            7999999999999999999988888776543110               011234455543   33 2333321   269


Q ss_pred             cEEEEcCCCC--------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           74 DVVYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        74 d~vi~~a~~~--------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+|||+|+..              ..++.+++++|+ ...+|||+||..+|++....+.+|..+..|.+.| .+|..+|+
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  149 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE  149 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence            9999999742              224668889887 3347999999999997655567777777777766 99999998


Q ss_pred             HHhh----cCCceeEeecceeeCCCCCC-c----hhHHHHHHHHcCCcccCC-CCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          138 VLES----KGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       138 ~~~~----~~~~~~i~r~~~i~g~~~~~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ++++    .+++++++||+++|||+... .    ....+...+.++....++ ++++..++|+|++|++++++.+++...
T Consensus       150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~  229 (308)
T PRK11150        150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV  229 (308)
T ss_pred             HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence            8753    58999999999999997532 1    233444566666543333 566778999999999999999887653


Q ss_pred             ccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          208 ASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       208 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                        +++||+++++.+|+.|+++.+.+.+|.
T Consensus       230 --~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        230 --SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             --CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence              469999999999999999999999985

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.98  E-value=1.2e-31  Score=219.17  Aligned_cols=217  Identities=18%  Similarity=0.202  Sum_probs=169.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++||+|++++|+.++. ..+.          ..+++++.+|++|++++.++++  ++|+|||++
T Consensus         6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence            79999999999999999999999999986542 1111          2579999999999999999999  999999997


Q ss_pred             CCC-----------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCcee
Q 024575           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWT  147 (265)
Q Consensus        81 ~~~-----------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~  147 (265)
                      +..           ..++.+++++++  ++++||++||.++...          +  ...+..+|..+|+++++.+++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~----------~--~~~~~~~K~~~e~~l~~~~l~~t  140 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY----------P--YIPLMKLKSDIEQKLKKSGIPYT  140 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc----------C--CChHHHHHHHHHHHHHHcCCCeE
Confidence            642           234678999987  8899999998653210          0  11234789999999999999999


Q ss_pred             EeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHH
Q 024575          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (265)
Q Consensus       148 i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~  227 (265)
                      ++||+.+|+..     ...+......+.+... ..+.+.++++|++|+|++++.+++++...+++||+++++.+|+.|++
T Consensus       141 ilRp~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~  214 (317)
T CHL00194        141 IFRLAGFFQGL-----ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEII  214 (317)
T ss_pred             EEeecHHhhhh-----hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHH
Confidence            99999887641     2112222223344333 34566789999999999999999887667889999999999999999


Q ss_pred             HHHHHHhCCCccccccceeeCCCcc
Q 024575          228 RACAKVTGLLDFRSLNLCTTTPKSL  252 (265)
Q Consensus       228 ~~i~~~~g~~~~~~~~~~~~~~~~~  252 (265)
                      +.+.+.+|.+.    .+.++|....
T Consensus       215 ~~~~~~~g~~~----~~~~vp~~~~  235 (317)
T CHL00194        215 SLCEQLSGQKA----KISRVPLFLL  235 (317)
T ss_pred             HHHHHHhCCCC----eEEeCCHHHH
Confidence            99999999987    7777775443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.98  E-value=4.3e-31  Score=218.26  Aligned_cols=233  Identities=19%  Similarity=0.181  Sum_probs=179.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||+||+|++++++|++.|++|++++|++.... ..+..... .......+++++.+|++|.+.+.+++...++|+|||+
T Consensus        12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~   90 (340)
T PLN02653         12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYI-DPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL   90 (340)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcc-ccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence            799999999999999999999999998764311 11110000 0000013588999999999999999986668999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCC-----cEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhH
Q 024575           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~~-----~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (265)
                      |+..                ..++.+++++++  +++     +||++||..+||.... +.+|+.+..|.+.| .+|..+
T Consensus        91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~  169 (340)
T PLN02653         91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA  169 (340)
T ss_pred             CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence            9862                224677888876  443     8999999999997654 77888888888777 999999


Q ss_pred             HHHHh----hcCCceeEeecceeeCCCCCCchh----HHHHHHHHcCCcccC-CCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       136 E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      |.+++    +.++.++..|+.++|||+....++    ..++..+..+....+ ++++++.++|+|++|+|++++.++++.
T Consensus       170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            99874    457788889999999997443332    333445556655444 488899999999999999999999875


Q ss_pred             cccCceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          207 KASRQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      .  ++.||+++++.+|+.|+++.+.+.+|.+
T Consensus       250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        250 K--PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             C--CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            4  4689999999999999999999999965

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.98  E-value=3.2e-31  Score=219.68  Aligned_cols=229  Identities=15%  Similarity=0.172  Sum_probs=180.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||+++++.|+++|++|++++|+.........      ......++.++.+|+++.+.+.++++..++|+|||+|
T Consensus        10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622        10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE------LLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH------HHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999999999998654211100      0011246778999999999999999866789999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CCcEEEEecceeeecCCC-CCCCCCCCCCccccc-cchhhHHHHH
Q 024575           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~-~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +..                ..++.+++++++  + +++||++||..+|+.... .+.+|+.+..|.+.| .+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            852                234677888876  3 689999999999986432 356677676777767 8999999887


Q ss_pred             hh-----------cCCceeEeecceeeCCCC--CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          140 ES-----------KGVNWTSLRPVYIYGPLN--YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       140 ~~-----------~~~~~~i~r~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      +.           .+++++++||+++|||+.  ...+++.++..+..++.+.+ +++++.++|+|++|++++++.++++.
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~  242 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL  242 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence            43           289999999999999974  24567888888888877665 56889999999999999999887642


Q ss_pred             ----cccCceEEecCC--CccCHHHHHHHHHHHhCC
Q 024575          207 ----KASRQVFNISGE--KYVTFDGLARACAKVTGL  236 (265)
Q Consensus       207 ----~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~  236 (265)
                          ...++.||++++  +.++..|+++.+.+.++.
T Consensus       243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence                123579999974  789999999999988763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.98  E-value=4.4e-32  Score=217.76  Aligned_cols=221  Identities=25%  Similarity=0.331  Sum_probs=170.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+|++|++|.+.|.+.|++|+++.|.                          ..|++|.+.+.+.+...++|+|||||
T Consensus         6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            6999999999999999999999999775                          34788999999999977899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +..                ...+.+++++|. ...++||+||..||+...+.|++|++++.|.+.| ++|.++|+.+++.
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            863                345678888887 6679999999999988888889999999999988 9999999999886


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc---cCceEEecCCC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA---SRQVFNISGEK  219 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~i~~~~  219 (265)
                      .-++.|+|++++||+ ...++..+++.....++.+.+..  ++.+++++++|+|+++..++++...   ..++||+++++
T Consensus       140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            669999999999999 44678888999999999887754  4789999999999999999987542   45799999999


Q ss_pred             ccCHHHHHHHHHHHhCCCccccccceeeCCCccc
Q 024575          220 YVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       220 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      .+|+.|+++.+.+.+|.+.   ..+...+.....
T Consensus       217 ~~S~~e~~~~i~~~~~~~~---~~i~~~~~~~~~  247 (286)
T PF04321_consen  217 RVSRYEFAEAIAKILGLDP---ELIKPVSSSEFP  247 (286)
T ss_dssp             -EEHHHHHHHHHHHHTHCT---TEEEEESSTTST
T ss_pred             ccCHHHHHHHHHHHhCCCC---ceEEecccccCC
Confidence            9999999999999999886   455555555443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=7.4e-31  Score=203.85  Aligned_cols=207  Identities=23%  Similarity=0.260  Sum_probs=185.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||++|++|+.|.+.|. .+++|++++|.+                          +|++|.+.+.+++.+.+||+|||+|
T Consensus         6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            7999999999999999 679999998863                          5899999999999988999999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +..                ..+..++.++|+ -..++||+||..||....+.|+.|++.+.|.+.| ++|...|..+++.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            873                345778888888 5679999999999998888899999999999998 9999999999999


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +-+..|+|.+++||... .+|...+++...+++++....+  +..++++..|+|+++..+++.....+ +||+++....|
T Consensus       139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~~~~~~-~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEKEKEGG-VYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhccccCc-EEEEeCCCccc
Confidence            99999999999999854 6778888999999988887654  88999999999999999998876544 99999988899


Q ss_pred             HHHHHHHHHHHhCCCc
Q 024575          223 FDGLARACAKVTGLLD  238 (265)
Q Consensus       223 ~~el~~~i~~~~g~~~  238 (265)
                      |.|+++.|.+..+.+.
T Consensus       215 wydfa~~I~~~~~~~~  230 (281)
T COG1091         215 WYEFAKAIFEEAGVDG  230 (281)
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999999776

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=1.9e-30  Score=215.54  Aligned_cols=230  Identities=20%  Similarity=0.236  Sum_probs=178.4

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++|++ |+++.|..... ......     + .....++++.+|++|.+++.+++...++|+|||
T Consensus         6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAD-----V-SDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHh-----c-ccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999976 55455432210 000000     0 001357789999999999999998557999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-----------CCCcEEEEecceeeecCC---------C-CCCCCCC
Q 024575           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD---------L-LPHCETD  121 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~-----------~~~~~v~~Ss~~~~~~~~---------~-~~~~e~~  121 (265)
                      +|+..                ..++.+++++|+           ++++||++||..+|+...         . .+++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            99862                224677888764           246899999999998531         1 2356777


Q ss_pred             CCCccccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      +..|.+.| .+|..+|.+++    +.+++++++|++++|||+.. ..++..++..+..+..+.+++++++.++++|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            77787777 99999998874    45899999999999999853 35666677777777777777888999999999999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      +++++.+++++. .++.||+++++.+++.|+++.+++.+|..
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhccc
Confidence            999999888654 46799999999999999999999999864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.97  E-value=5e-30  Score=213.07  Aligned_cols=244  Identities=19%  Similarity=0.245  Sum_probs=180.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|++.|++|++++|............ .........++.++.+|+++++.+.++++..++|+|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a   89 (352)
T PLN02240         11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRV-KELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA   89 (352)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHH-HHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEcc
Confidence            799999999999999999999999987643211000000 0000001246889999999999999988766799999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +...                .++.+++++++  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (352)
T PLN02240         90 GLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRD  169 (352)
T ss_pred             ccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            8531                23567888876  6789999999999987777788898888887777 999999998842


Q ss_pred             -----cCCceeEeecceeeCCCCC-------Cc---hhHHHHHHHHcCC--cccCCC------CCCceeeeeeHHHHHHH
Q 024575          142 -----KGVNWTSLRPVYIYGPLNY-------NP---VEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLARA  198 (265)
Q Consensus       142 -----~~~~~~i~r~~~i~g~~~~-------~~---~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~a~~  198 (265)
                           .+++++++|++++||++..       ..   .+..++..+..++  .+.+++      ++.+.++|+|++|++++
T Consensus       170 ~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a  249 (352)
T PLN02240        170 IHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADG  249 (352)
T ss_pred             HHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHH
Confidence                 3678999999999997421       11   1222344444333  333333      67788999999999999


Q ss_pred             HHHHhcCc----cccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          199 FVQVLGNE----KASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       199 ~~~~~~~~----~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      ++.++...    ...+++||+++++.+|+.|+++++.+.+|.+.    ++...+.
T Consensus       250 ~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~----~~~~~~~  300 (352)
T PLN02240        250 HIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKI----PLKLAPR  300 (352)
T ss_pred             HHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCC----CceeCCC
Confidence            98887542    33457999999999999999999999999876    5555443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=3.1e-30  Score=195.66  Aligned_cols=234  Identities=21%  Similarity=0.280  Sum_probs=188.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||.||||++|++.|..+||+|++++..-......+..      +-...+++.+.-|+..+     ++.  .+|-|||+|
T Consensus        33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~------~~~~~~fel~~hdv~~p-----l~~--evD~IyhLA   99 (350)
T KOG1429|consen   33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEH------WIGHPNFELIRHDVVEP-----LLK--EVDQIYHLA   99 (350)
T ss_pred             ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcch------hccCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence            79999999999999999999999999876663322221      01135666666666443     666  999999998


Q ss_pred             CC----------------CccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCC-----CCCccccc-cchhhHHH
Q 024575           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~----------------~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~E~  137 (265)
                      +.                |..++.+++..|+ -.+||++.||..|||++...|..|..     +..|.+-| ..|..+|.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~  179 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET  179 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence            86                3346777777777 55999999999999987666655542     33455555 88999999


Q ss_pred             HH----hhcCCceeEeecceeeCCC---CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          138 VL----ESKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       138 ~~----~~~~~~~~i~r~~~i~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      ++    ++.|+.+.|.|+.+.|||.   +.++....++.+.++++++.++++|.+.++|.+++|+++.++++++++..  
T Consensus       180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~--  257 (350)
T KOG1429|consen  180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR--  257 (350)
T ss_pred             HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence            87    5678999999999999997   36788899999999999999999999999999999999999999999864  


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCccc
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      +.+|+++++.+|+.|+++++.+..+-..    .++..+...-+
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s----~i~~~~~~~Dd  296 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVS----EIEFVENGPDD  296 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCc----ceeecCCCCCC
Confidence            3599999999999999999999997666    66666554433

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=5.1e-30  Score=202.04  Aligned_cols=228  Identities=18%  Similarity=0.206  Sum_probs=168.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++||.|+++.|++......   ....++.....+.+++.+|+.|++++.++++  ++|.|||+|
T Consensus        12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~---~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH~A   86 (327)
T KOG1502|consen   12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT---EHLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDGVFHTA   86 (327)
T ss_pred             eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH---HHHHhcccCcccceEEeccccccchHHHHHh--CCCEEEEeC
Confidence            89999999999999999999999999999872110   0011122223568999999999999999999  999999999


Q ss_pred             CC---------------CccchHHHHHhCC---CCCcEEEEecceeeecC-----CCCCCCCCCCC-------Ccccccc
Q 024575           81 GR---------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTV-------DPKSRHK  130 (265)
Q Consensus        81 ~~---------------~~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~-----~~~~~~e~~~~-------~~~~~~~  130 (265)
                      ..               .+.++.|++++|.   .++|+|++||..+....     ....++|+.-.       ...+|..
T Consensus        87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~  166 (327)
T KOG1502|consen   87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL  166 (327)
T ss_pred             ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence            86               1347899999987   58999999998876432     12223333211       1123338


Q ss_pred             chhhHHHHH----hhcCCceeEeecceeeCCCCCC--chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       131 ~k~~~E~~~----~~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +|..+|+..    ++.+++.+.+.|+.|+||....  +.....+....+|..-...   +....++|++|+|++.+.+++
T Consensus       167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E  243 (327)
T KOG1502|consen  167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALE  243 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHc
Confidence            999999864    5668999999999999998544  2233444455555433222   244569999999999999999


Q ss_pred             CccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++... ++|.+.+. ..++.|+++.+.+.+....
T Consensus       244 ~~~a~-GRyic~~~-~~~~~ei~~~l~~~~P~~~  275 (327)
T KOG1502|consen  244 KPSAK-GRYICVGE-VVSIKEIADILRELFPDYP  275 (327)
T ss_pred             CcccC-ceEEEecC-cccHHHHHHHHHHhCCCCC
Confidence            99875 58877774 4669999999999887543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.97  E-value=6.7e-30  Score=211.16  Aligned_cols=232  Identities=23%  Similarity=0.331  Sum_probs=173.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||+|+++++.|+++|++|++++|........+.     .+... ..++.++.+|++|.+.+.+++...++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999875433111110     00110 13577889999999999998875579999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCC-Cccccc-cchhhHHHHH
Q 024575           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL  139 (265)
Q Consensus        80 a~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-~~~~~~-~~k~~~E~~~  139 (265)
                      |+...                .++.+++++|+  ++++||++||..+|+.....+++|+.+. .|.+.| .+|..+|.++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            97532                14567888877  7889999999999987666677887775 566666 9999999988


Q ss_pred             hh-----cCCceeEeecceeeCCCCC-----------CchhHHHHHHHHcCC--cccCC------CCCCceeeeeeHHHH
Q 024575          140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIP------GSGIQVTQLGHVKDL  195 (265)
Q Consensus       140 ~~-----~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~i~~~D~  195 (265)
                      ++     .+++++++|++.+|||...           ..+... +..+..+.  .+.++      .++.+.++|+|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY-IAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHH-HHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            53     3689999999999997411           112222 33333332  23222      256788999999999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |++++.+++..  ...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  284 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPV  284 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            99999988752  23357999999999999999999999999876

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=9e-30  Score=208.32  Aligned_cols=222  Identities=31%  Similarity=0.427  Sum_probs=180.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCc-cEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-d~vi~~   79 (265)
                      ||||||+|++|+++|++.||+|++++|...+.....            .++.++.+|+++.+...+...  .. |+|||+
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~   71 (314)
T COG0451           6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL   71 (314)
T ss_pred             EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence            799999999999999999999999999877732111            367889999999988888887  66 999999


Q ss_pred             CCCC-----------------ccchHHHHHhCC--CCCcEEEEecceeeecC-CCCCCCCC-CCCCccccc-cchhhHHH
Q 024575           80 NGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        80 a~~~-----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~-~~~~~~e~-~~~~~~~~~-~~k~~~E~  137 (265)
                      ++..                 ..++.+++++++  ++++|||+||.++|+.. ...+.+|+ .+..|.+.| .+|..+|.
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8863                 123677888887  89999999998888754 33367777 567777655 99999999


Q ss_pred             HHhh----cCCceeEeecceeeCCCCCCc----hhHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       138 ~~~~----~~~~~~i~r~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      ++..    .+++++++||+++|||+....    +...++.....+.. ....+++...++++|++|++++++.+++++..
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            9854    469999999999999986553    44444555666664 55556777889999999999999999999875


Q ss_pred             cCceEEecCCC-ccCHHHHHHHHHHHhCCCc
Q 024575          209 SRQVFNISGEK-YVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       209 ~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~  238 (265)
                      .  .||+++++ ..+..|+++.+.+.+|.+.
T Consensus       232 ~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~  260 (314)
T COG0451         232 G--VFNIGSGTAEITVRELAEAVAEAVGSKA  260 (314)
T ss_pred             c--EEEeCCCCCcEEHHHHHHHHHHHhCCCC
Confidence            4  99999997 8999999999999999886

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=9.3e-30  Score=209.94  Aligned_cols=223  Identities=19%  Similarity=0.244  Sum_probs=166.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||+|++++++|+++|++|++++|+........    ...+.....+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A   89 (342)
T PLN02214         16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTH----LRELEGGKERLILCKADLQDYEALKAAID--GCDGVFHTA   89 (342)
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHH----HHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEec
Confidence            799999999999999999999999999765411100    00011111358889999999999999998  899999999


Q ss_pred             CCC-----------ccchHHHHHhCC--CCCcEEEEecc-eeeecCCC---CCCCCCC------CCCccccc-cchhhHH
Q 024575           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNTE  136 (265)
Q Consensus        81 ~~~-----------~~~~~~l~~~~~--~~~~~v~~Ss~-~~~~~~~~---~~~~e~~------~~~~~~~~-~~k~~~E  136 (265)
                      +..           ..++.+++++++  ++++||++||. .+||....   .+++|+.      +..|.+.| .+|..+|
T Consensus        90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE  169 (342)
T PLN02214         90 SPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAE  169 (342)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHH
Confidence            863           335778898877  78899999996 58875332   2356653      22345555 9999999


Q ss_pred             HHHh----hcCCceeEeecceeeCCCCCCc---hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          137 SVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       137 ~~~~----~~~~~~~i~r~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      +++.    +.+++++++||+++|||+....   ....++ ....++... .  +++.++|+|++|+|++++.+++++.. 
T Consensus       170 ~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~~-  244 (342)
T PLN02214        170 QAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPSA-  244 (342)
T ss_pred             HHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCccc-
Confidence            9874    4589999999999999975422   122223 333444322 2  34578999999999999999988654 


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhC
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      ++.||+++ ..+++.|+++.+.+.++
T Consensus       245 ~g~yn~~~-~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        245 SGRYLLAE-SARHRGEVVEILAKLFP  269 (342)
T ss_pred             CCcEEEec-CCCCHHHHHHHHHHHCC
Confidence            45899987 57899999999999986

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.97  E-value=1.4e-29  Score=207.21  Aligned_cols=223  Identities=22%  Similarity=0.288  Sum_probs=168.3

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc--cCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~d~vi   77 (265)
                      ||||||+|+++++.|.+.|+ +|+++.|.....  .+..          .....+.+|+++.+.+..+...  .++|+||
T Consensus         4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLN----------LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhh----------hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            79999999999999999997 788887754331  1110          1123567788887777665531  3899999


Q ss_pred             EcCCCC--------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC-Cccccc-cchhhHHHHHh
Q 024575           78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVLE  140 (265)
Q Consensus        78 ~~a~~~--------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-~~~~~~-~~k~~~E~~~~  140 (265)
                      |+|+..              ..++.+++++|+ ...+||++||.++|+.... +.+|++.. .|.+.| .+|..+|.+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            999852              234677888876 3348999999999986543 45555543 466666 99999999875


Q ss_pred             h------cCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCC------CCCCceeeeeeHHHHHHHHHHHh
Q 024575          141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       141 ~------~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +      .+++++++||+++|||+..     ..++..++..+..++.+.++      +++++.++++|++|++++++.++
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~  230 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL  230 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence            3      2568999999999999743     23455566666666655432      46778899999999999999999


Q ss_pred             cCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      .. . .+++||+++++++|+.|+++.+.+.+|.+.
T Consensus       231 ~~-~-~~~~yni~~~~~~s~~e~~~~i~~~~g~~~  263 (314)
T TIGR02197       231 EN-G-VSGIFNLGTGRARSFNDLADAVFKALGKDE  263 (314)
T ss_pred             hc-c-cCceEEcCCCCCccHHHHHHHHHHHhCCCC
Confidence            87 3 456999999999999999999999999765

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.97  E-value=5.6e-29  Score=204.76  Aligned_cols=232  Identities=22%  Similarity=0.327  Sum_probs=175.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++|++|+++.|............     .. ..+++++.+|+.+.+.+.+++...++|+|||++
T Consensus         5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG-----ER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh-----cc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            799999999999999999999998876443322111110     00 125788999999999999998766799999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +..                ..++.++++++.  +++++|++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence            853                223567778776  6789999999999987766678888887777766 999999998742


Q ss_pred             -----cCCceeEeecceeeCCCCC----------CchhHHHHHHHH-cCCcccCC------CCCCceeeeeeHHHHHHHH
Q 024575          142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       142 -----~~~~~~i~r~~~i~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~a~~~  199 (265)
                           .+++++++||+.+|||+..          ..++..+..... ....+..+      .+++..++|+|++|+++++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence                 6899999999999998521          123333333332 22222222      3556789999999999999


Q ss_pred             HHHhcCc--cccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +.+++..  ...++.||+++++++|+.|+++.+++.+|.+.
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~  279 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF  279 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc
Confidence            9998753  23467999999999999999999999999876

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=4.4e-29  Score=206.14  Aligned_cols=225  Identities=21%  Similarity=0.281  Sum_probs=162.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccC--CCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||+||||++|+++|+++|++|+++.|+.......  ...     +.. .++++++.+|++|.+.+.++++  ++|+|||
T Consensus        15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih   86 (338)
T PLN00198         15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRA-----LQE-LGDLKIFGADLTDEESFEAPIA--GCDLVFH   86 (338)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHh-----cCC-CCceEEEEcCCCChHHHHHHHh--cCCEEEE
Confidence            79999999999999999999999999886542100  000     000 1358899999999999999998  8999999


Q ss_pred             cCCCC---------------ccchHHHHHhCC---CCCcEEEEecceeeecCC----CCCCCCCC---------CCCccc
Q 024575           79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKS  127 (265)
Q Consensus        79 ~a~~~---------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~----~~~~~e~~---------~~~~~~  127 (265)
                      +|+..               ..++.++++++.   ++++||++||..+|+...    ..+.+|+.         ...|.+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            99842               123556788764   478999999999998432    22344431         223555


Q ss_pred             cc-cchhhHHHHHh----hcCCceeEeecceeeCCCCCC---chhHHHHHHHHcCCcccCCC-CCC----ceeeeeeHHH
Q 024575          128 RH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGI----QVTQLGHVKD  194 (265)
Q Consensus       128 ~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~D  194 (265)
                      .| .+|..+|.++.    +.+++++++||+++|||+...   ..+. ++..+..++.+...+ .+.    ..++|+|++|
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D  245 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVED  245 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHHH
Confidence            45 99999998764    468999999999999997432   2222 233445555544433 222    2379999999


Q ss_pred             HHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          195 LARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       195 ~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      ++++++.+++.+.. ++.| ++++..+++.|+++.+.+.++.
T Consensus       246 ~a~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        246 VCRAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             HHHHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence            99999999987653 3467 4556779999999999998863

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=7.5e-29  Score=203.76  Aligned_cols=225  Identities=16%  Similarity=0.165  Sum_probs=166.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||++++++|+++|++|++++|+...... ....  ........+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A   85 (325)
T PLN02989         11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKK-TDHL--LALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA   85 (325)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhh-HHHH--HhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999988654211 0000  0000001468899999999999999998  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC---CCCcEEEEecceeeecC-----CCCCCCCCCCCCcc------ccc-
Q 024575           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH-  129 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~-----~~~~~~e~~~~~~~------~~~-  129 (265)
                      +..                ..++.++++++.   +.++||++||..+|+..     ...+.+|+.+..|.      +.| 
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            852                123556777764   45799999999887543     23356777666542      345 


Q ss_pred             cchhhHHHHHh----hcCCceeEeecceeeCCCCCC--chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      .+|..+|.++.    +.+++++++||+++|||+...  .+...++..+..++...  +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence            99999998874    468999999999999998542  24444555555554321  2  24579999999999999999


Q ss_pred             cCccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      +++.. ++.||++ +..+|+.|+++++.+.++.
T Consensus       242 ~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        242 ETPSA-NGRYIID-GPVVTIKDIENVLREFFPD  272 (325)
T ss_pred             cCccc-CceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            87654 4589995 4589999999999999984

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=6.4e-29  Score=203.89  Aligned_cols=224  Identities=17%  Similarity=0.222  Sum_probs=164.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|+++.|+..... ......  .......+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A   85 (322)
T PLN02986         11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRK-KTEHLL--ALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA   85 (322)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH-HHHHHH--hccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence            799999999999999999999999999876421 100000  000012468899999999999999999  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC---CCCcEEEEecceee--ecC---CCCCCCCCCCCCc------cccc-c
Q 024575           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDP------KSRH-K  130 (265)
Q Consensus        81 ~~~---------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~--~~~---~~~~~~e~~~~~~------~~~~-~  130 (265)
                      +..               ..++.+++++++   +++|||++||..+|  +..   ...+++|+....|      .+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            852               123567788765   47899999998764  322   1234555543322      3445 9


Q ss_pred             chhhHHHHHh----hcCCceeEeecceeeCCCCCC--chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +|..+|.++.    +.+++++++||+++|||+...  .+...++.....++.+  ++  .+.++|+|++|+|++++.+++
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc
Confidence            9999998763    468999999999999997432  2233445555555543  23  456899999999999999999


Q ss_pred             CccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          205 NEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      ++... +.||+++ +.+|+.|+++.+.+.++
T Consensus       242 ~~~~~-~~yni~~-~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        242 TPSAN-GRYIIDG-PIMSVNDIIDILRELFP  270 (322)
T ss_pred             CcccC-CcEEEec-CCCCHHHHHHHHHHHCC
Confidence            87654 4899954 67999999999999987

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=4e-29  Score=208.87  Aligned_cols=226  Identities=22%  Similarity=0.237  Sum_probs=175.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (265)
                      |||||++|++++++|+++|++|++++|+..+.......   ........+++++.+|++|.+.+.++++..  ++|+|||
T Consensus        66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~---~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~  142 (390)
T PLN02657         66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGK---EDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS  142 (390)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchh---hHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence            79999999999999999999999999987552111000   000011257899999999999999999843  5999999


Q ss_pred             cCCCC-----------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-cccchhhHHHHHhh--c
Q 024575           79 INGRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLES--K  142 (265)
Q Consensus        79 ~a~~~-----------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~~~~k~~~E~~~~~--~  142 (265)
                      |++..           ..++.+++++++  ++++||++||.++++              |.. +..+|...|..++.  .
T Consensus       143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~l~~~~~  208 (390)
T PLN02657        143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAELQALDS  208 (390)
T ss_pred             CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHHHHhccC
Confidence            98642           124678888877  789999999988752              122 33789999998865  7


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCce-eeeeeHHHHHHHHHHHhcCccccCceEEecCC-Cc
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV-TQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KY  220 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~  220 (265)
                      +++++++||+.+||+      ...++..+..++++.++++++.. .++||++|+|++++.++.++...+++||++++ +.
T Consensus       209 gl~~tIlRp~~~~~~------~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~  282 (390)
T PLN02657        209 DFTYSIVRPTAFFKS------LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKA  282 (390)
T ss_pred             CCCEEEEccHHHhcc------cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcc
Confidence            899999999999975      22345566677777677887765 46899999999999999876666789999986 68


Q ss_pred             cCHHHHHHHHHHHhCCCccccccceeeCCCccc
Q 024575          221 VTFDGLARACAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       221 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      +|+.|+++++.+.+|++.    ++..+|....+
T Consensus       283 ~S~~Eia~~l~~~lG~~~----~~~~vp~~~~~  311 (390)
T PLN02657        283 LTPLEQGEMLFRILGKEP----KFFKVPIQIMD  311 (390)
T ss_pred             cCHHHHHHHHHHHhCCCC----ceEEcCHHHHH
Confidence            999999999999999987    77777765444

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=9.1e-29  Score=203.10  Aligned_cols=225  Identities=16%  Similarity=0.176  Sum_probs=164.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|+..... ....  .........+++++.+|+.+++.+..+++  ++|+|||+|
T Consensus        10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   84 (322)
T PLN02662         10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPK-KTEH--LLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA   84 (322)
T ss_pred             ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchh-hHHH--HHhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence            799999999999999999999999999865411 0000  00000012468899999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC---CCCcEEEEecce--eeecC---CCCCCCCCCCCCcc------ccc-c
Q 024575           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAG--VYLKS---DLLPHCETDTVDPK------SRH-K  130 (265)
Q Consensus        81 ~~~---------------~~~~~~l~~~~~---~~~~~v~~Ss~~--~~~~~---~~~~~~e~~~~~~~------~~~-~  130 (265)
                      +..               ..++.++++++.   ++++||++||.+  +|+..   ...+++|+.+..|.      +.| .
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            752               223567888754   578999999986  46532   22346666554442      234 8


Q ss_pred             chhhHHHHHh----hcCCceeEeecceeeCCCCCC--chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +|..+|.+++    +.+++++++||+++|||+...  .....++..+..++..  .  +++.++|+|++|+|++++.+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHHHHHHHHhc
Confidence            9999998763    468999999999999997432  2333444445444432  1  2367899999999999999998


Q ss_pred             CccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      ++... +.|++++ +.+++.|+++.+.+.++.
T Consensus       241 ~~~~~-~~~~~~g-~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        241 IPSAS-GRYCLVE-RVVHYSEVVKILHELYPT  270 (322)
T ss_pred             CcCcC-CcEEEeC-CCCCHHHHHHHHHHHCCC
Confidence            86543 4788874 789999999999999874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.96  E-value=4e-28  Score=199.76  Aligned_cols=220  Identities=20%  Similarity=0.304  Sum_probs=169.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+|++|+++++.|+++|++|++++|++... ..+.          ..+++++.+|+.+.+++.++++  ++|+|||++
T Consensus         6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a   72 (328)
T TIGR03466         6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA   72 (328)
T ss_pred             ECCccchhHHHHHHHHHCCCEEEEEEecCccc-cccc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence            79999999999999999999999999986652 1121          1478899999999999999998  999999998


Q ss_pred             CCC--------------ccchHHHHHhCC--CCCcEEEEecceeeec-CCCCCCCCCCCCCcc---ccc-cchhhHHHHH
Q 024575           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPK---SRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~--------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~-~~~~~~~e~~~~~~~---~~~-~~k~~~E~~~  139 (265)
                      +..              ..++.++++++.  +++++|++||..+|+. ....+.+|+.+..+.   +.| .+|..+|.++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence            642              234567888876  6889999999999985 344567777666542   345 8999999987


Q ss_pred             hh----cCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEE
Q 024575          140 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (265)
Q Consensus       140 ~~----~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (265)
                      ++    .+++++++||+++|||+.... ....++.....+.. +...  +...+++|++|+|++++.+++++. .++.|+
T Consensus       153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKM-PAYV--DTGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCC-ceee--CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            53    589999999999999975322 22233333333332 2211  234689999999999999998754 467888


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCc
Q 024575          215 ISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       215 i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++ ++.+++.|+++.+.+.+|.+.
T Consensus       229 ~~-~~~~s~~e~~~~i~~~~g~~~  251 (328)
T TIGR03466       229 LG-GENLTLKQILDKLAEITGRPA  251 (328)
T ss_pred             ec-CCCcCHHHHHHHHHHHhCCCC
Confidence            75 588999999999999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=1.5e-28  Score=203.93  Aligned_cols=226  Identities=19%  Similarity=0.230  Sum_probs=159.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|+...... +...  ........+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A   85 (351)
T PLN02650         11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKK-VKHL--LDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA   85 (351)
T ss_pred             eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH-HHHH--HhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999997654211 0000  0000001357889999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC--C-CCcEEEEecceeeecC-CCCC-CCCCCC---------CCccccc-c
Q 024575           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKS-DLLP-HCETDT---------VDPKSRH-K  130 (265)
Q Consensus        81 ~~~---------------~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~-~~~~-~~e~~~---------~~~~~~~-~  130 (265)
                      +..               ..++.++++++.  + +++|||+||.++|+.. ...+ ++|+..         ..+.+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            752               124567888876  4 6899999999877643 2223 344421         1233345 9


Q ss_pred             chhhHHHHHh----hcCCceeEeecceeeCCCCCCchhHHHHHHH--HcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +|..+|.+++    +.+++++++||+++|||+........++...  ..+.... ++. ...++|+|++|+|++++.+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhc
Confidence            9999998773    4689999999999999975433222222221  2222211 221 234799999999999999998


Q ss_pred             CccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          205 NEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      ++.. ++.| +++++.+++.|+++++.+.++
T Consensus       244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYP  272 (351)
T ss_pred             CcCc-CceE-EecCCCcCHHHHHHHHHHhCc
Confidence            7654 3478 566688999999999999886

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=9.6e-28  Score=182.35  Aligned_cols=213  Identities=25%  Similarity=0.291  Sum_probs=157.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||+||++|+.+|.+.||+|++++|++.+....+.           ..+.       ..+.+.+.... ++|+|||+|
T Consensus         4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~~-~~DavINLA   64 (297)
T COG1090           4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALTL-GIDAVINLA   64 (297)
T ss_pred             eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhcccC-CCCEEEECC
Confidence            7999999999999999999999999999988533322           1111       22333444431 699999999


Q ss_pred             CCCcc------------------chHHHHHh---CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccccc--hhhHH
Q 024575           81 GREAD------------------EVEPILDA---LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTE  136 (265)
Q Consensus        81 ~~~~~------------------~~~~l~~~---~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~--k~~~E  136 (265)
                      |.++.                  .+..+.++   ++ +.+.||-.|.++.||......++|+++....-....  -++-|
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~  144 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEE  144 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHH
Confidence            98533                  24455555   44 778899999999999999889999844332211221  22222


Q ss_pred             HHH-hhcCCceeEeecceeeCCCCCCchhHHHHHHHH--cCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceE
Q 024575          137 SVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (265)
Q Consensus       137 ~~~-~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (265)
                      ..- +..+.+++.+|.|+|.++.  +++...++...+  -|.++   |+|.++++|||++|+++++..++++....| .|
T Consensus       145 a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~  218 (297)
T COG1090         145 ALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQLSG-PF  218 (297)
T ss_pred             HhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cc
Confidence            222 3458999999999999974  334443333332  23333   899999999999999999999999987655 99


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCc
Q 024575          214 NISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       214 ~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |++++.+++..++.+++.+.++++.
T Consensus       219 N~taP~PV~~~~F~~al~r~l~RP~  243 (297)
T COG1090         219 NLTAPNPVRNKEFAHALGRALHRPA  243 (297)
T ss_pred             cccCCCcCcHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999886

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=2.8e-28  Score=202.76  Aligned_cols=228  Identities=20%  Similarity=0.248  Sum_probs=163.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh---hhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||+||||+++++.|+++|++|++++|+..... .+...  ....+   ...++.++.+|++|.+.+.++++  ++|.||
T Consensus        59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l--~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d~V~  133 (367)
T PLN02686         59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREM--EMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCAGVF  133 (367)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHH--hhhccccccCCceEEEEcCCCCHHHHHHHHH--hccEEE
Confidence            799999999999999999999999988754311 11000  00000   01257889999999999999998  899999


Q ss_pred             EcCCCC----------------ccchHHHHHhCC---CCCcEEEEecc--eeeecC--CC--CCCCCCC------CCCcc
Q 024575           78 DINGRE----------------ADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TVDPK  126 (265)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~~~~---~~~~~v~~Ss~--~~~~~~--~~--~~~~e~~------~~~~~  126 (265)
                      |+++..                ..++.+++++++   ++++|||+||.  .+|+..  ..  ..++|+.      +..|.
T Consensus       134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~  213 (367)
T PLN02686        134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK  213 (367)
T ss_pred             ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence            998741                223677899975   58999999996  477642  11  2244432      22344


Q ss_pred             ccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          127 SRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      +.| .+|..+|+++.    +.+++++++||+++|||+........++ ....+. +.+++++  ..+++|++|++++++.
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g--~~~~v~V~Dva~A~~~  289 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADG--LLATADVERLAEAHVC  289 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCC--CcCeEEHHHHHHHHHH
Confidence            445 99999999873    4689999999999999975332222222 333443 4455544  3579999999999999


Q ss_pred             HhcCc--cccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          202 VLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++.+  ...+++| +++++.+++.|+++.+.+.+|.+.
T Consensus       290 al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~  327 (367)
T PLN02686        290 VYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPI  327 (367)
T ss_pred             HHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCC
Confidence            99853  2345688 888899999999999999999876

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=1.3e-27  Score=193.63  Aligned_cols=216  Identities=25%  Similarity=0.266  Sum_probs=155.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||+++++.|++.|++|++++|++........           ..    ..|+.. +...+.+.  ++|+|||++
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~----~~~~~~-~~~~~~~~--~~D~Vvh~a   65 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG----YKPWAP-LAESEALE--GADAVINLA   65 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee----eecccc-cchhhhcC--CCCEEEECC
Confidence            7999999999999999999999999998776321110           11    112222 33455666  899999999


Q ss_pred             CCC------------------ccchHHHHHhCC--CC--CcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           81 GRE------------------ADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~~------------------~~~~~~l~~~~~--~~--~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      +..                  ...+.+++++++  ++  .+||++|+..+||.....+++|+.+..+.+++ ..+...|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            852                  223678888876  44  35777788888987666677787755555454 44444555


Q ss_pred             HH---hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEE
Q 024575          138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (265)
Q Consensus       138 ~~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (265)
                      .+   ++.+++++++||+++|||..  +....+........... ++++++.++++|++|+|+++..+++++.. .++||
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            43   34579999999999999963  22333332222111111 36778899999999999999999987654 45999


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCc
Q 024575          215 ISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       215 i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++++.+|+.|+++.+++.+|.+.
T Consensus       222 ~~~~~~~s~~di~~~i~~~~g~~~  245 (292)
T TIGR01777       222 ATAPEPVRNKEFAKALARALHRPA  245 (292)
T ss_pred             ecCCCccCHHHHHHHHHHHhCCCC
Confidence            999999999999999999999764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=5.5e-28  Score=187.61  Aligned_cols=243  Identities=24%  Similarity=0.326  Sum_probs=190.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||++.+.+|+++||.|+++++-.......+... ++...+ .+++.++++|+.|.+.++++|+...+|.|+|+|
T Consensus         8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~-~~l~~~-~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa   85 (343)
T KOG1371|consen    8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRV-RQLLGE-GKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA   85 (343)
T ss_pred             ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHH-HHhcCC-CCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence            799999999999999999999999998766643222210 001111 368999999999999999999999999999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCC-ccccc-cchhhHHHHHh
Q 024575           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE  140 (265)
Q Consensus        81 ~~----------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~-~~~~~-~~k~~~E~~~~  140 (265)
                      +.                |..++.++++.|+  +++.+||+||+.+||.+...|++|+.+.. |.+.| .+|..+|+++.
T Consensus        86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence            86                3557899999987  89999999999999999999999999988 88888 99999999984


Q ss_pred             ----hcCCceeEeecceeeC--CCC---------CCchhHHHHHHHHc---------CCcccCCCCCCceeeeeeHHHHH
Q 024575          141 ----SKGVNWTSLRPVYIYG--PLN---------YNPVEEWFFHRLKA---------GRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       141 ----~~~~~~~i~r~~~i~g--~~~---------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                          ..+++.+.+|..+++|  |..         ..++.+ .+.+..-         +..... .+++..++.+|+-|+|
T Consensus       166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla  243 (343)
T KOG1371|consen  166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLA  243 (343)
T ss_pred             hhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccc-cCCCeeecceeeEehH
Confidence                3458999999999998  321         122222 1112111         122222 3567889999999999


Q ss_pred             HHHHHHhcCccc--cCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCc
Q 024575          197 RAFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       197 ~~~~~~~~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +....+++....  .-++||++.+...++.+++.++++.+|.+.    ++..++.+.
T Consensus       244 ~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~----k~~~v~~R~  296 (343)
T KOG1371|consen  244 DGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKI----KKKVVPRRN  296 (343)
T ss_pred             HHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCC----CccccCCCC
Confidence            999999987542  335999999999999999999999999998    655555543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-27  Score=212.15  Aligned_cols=228  Identities=19%  Similarity=0.221  Sum_probs=166.2

Q ss_pred             CCccccchHHHHHHHH--HcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCCh------HHHHHHhhcc
Q 024575            1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDY------DFVKSSLSAK   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~--~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------~~~~~~~~~~   71 (265)
                      ||||||||++++++|+  +.|++|++++|++....  +..    .... ...+++++.+|++++      +.+.++ .  
T Consensus         6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--   76 (657)
T PRK07201          6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--LEA----LAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G--   76 (657)
T ss_pred             eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--HHH----HHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c--
Confidence            7999999999999999  47999999999653311  000    0000 015689999999984      445554 5  


Q ss_pred             CccEEEEcCCC-------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCC---CCccccc-cch
Q 024575           72 GFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDPKSRH-KGK  132 (265)
Q Consensus        72 ~~d~vi~~a~~-------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~---~~~~~~~-~~k  132 (265)
                      ++|+|||+|+.             |..++.+++++++  ++++|||+||..+||...+ +.+|+..   ..+.+.| .+|
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK  155 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTK  155 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHH
Confidence            99999999974             3446788899877  6899999999999986433 2334332   1223334 999


Q ss_pred             hhHHHHHh-hcCCceeEeecceeeCCCCCCc--------hhHHHHHHHHc-CCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          133 LNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       133 ~~~E~~~~-~~~~~~~i~r~~~i~g~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      ..+|.+++ ..+++++++||+++|||...+.        ++..++..... ...++.++.+....++++++|+++++..+
T Consensus       156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~  235 (657)
T PRK07201        156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL  235 (657)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence            99999987 4689999999999999864321        11112222211 11233445556678999999999999999


Q ss_pred             hcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++.+...++.||+++++++++.|+++.+.+.+|.+.
T Consensus       236 ~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        236 MHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             hcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            887666688999999999999999999999999764

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=1e-27  Score=205.29  Aligned_cols=236  Identities=14%  Similarity=0.151  Sum_probs=168.5

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCcccc--CCC-CCCh----hHHhh---------hhccceEEEecCC--
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QLP-GESD----QEFAE---------FSSKILHLKGDRK--   59 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~--~~~-~~~~----~~~~~---------~~~~~~~~~~D~~--   59 (265)
                      ||||||+|+++++.|++.+   .+|+++.|.......  .+. +...    ..+.+         ...+++++.+|++  
T Consensus        17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~   96 (491)
T PLN02996         17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD   96 (491)
T ss_pred             eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence            8999999999999999864   478999997654211  110 0000    00000         0257899999998  


Q ss_pred             -----ChHHHHHHhhccCccEEEEcCCC-------------CccchHHHHHhCC---CCCcEEEEecceeeecCCC----
Q 024575           60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----  114 (265)
Q Consensus        60 -----~~~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~----  114 (265)
                           +.+.+..+++  ++|+|||+|+.             |+.++.+++++++   ++++|||+||..+||...+    
T Consensus        97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E  174 (491)
T PLN02996         97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE  174 (491)
T ss_pred             CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence                 4455677777  89999999985             2345778888875   5789999999999986432    


Q ss_pred             CCCCCCC------------------------------------------------CCCccccccchhhHHHHHhh--cCC
Q 024575          115 LPHCETD------------------------------------------------TVDPKSRHKGKLNTESVLES--KGV  144 (265)
Q Consensus       115 ~~~~e~~------------------------------------------------~~~~~~~~~~k~~~E~~~~~--~~~  144 (265)
                      .++....                                                ...|..|..+|..+|.++++  .++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l  254 (491)
T PLN02996        175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL  254 (491)
T ss_pred             ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence            1111000                                                00123344999999999965  479


Q ss_pred             ceeEeecceeeCCCCCC--chh------HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--c-ccCceE
Q 024575          145 NWTSLRPVYIYGPLNYN--PVE------EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K-ASRQVF  213 (265)
Q Consensus       145 ~~~i~r~~~i~g~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~-~~~~~~  213 (265)
                      +++++||++||||+...  .++      ..++..+..+....+++++++.++++|++|++++++.++...  . ..+++|
T Consensus       255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY  334 (491)
T PLN02996        255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY  334 (491)
T ss_pred             CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence            99999999999987422  221      233444455665567789999999999999999999988652  1 235799


Q ss_pred             EecCC--CccCHHHHHHHHHHHhCCCc
Q 024575          214 NISGE--KYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       214 ~i~~~--~~~s~~el~~~i~~~~g~~~  238 (265)
                      |++++  .++|+.|+++.+.+.++..+
T Consensus       335 Ni~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        335 HVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             EecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            99998  88999999999999988655

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.95  E-value=2.1e-27  Score=197.12  Aligned_cols=225  Identities=20%  Similarity=0.232  Sum_probs=158.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||++++++|+++|++|++++|+.........     .+.. ..+++++.+|+.+.+.+.+++.  ++|+|||+|
T Consensus        16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   87 (353)
T PLN02896         16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS-----KWKE-GDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA   87 (353)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----hhcc-CCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence            7999999999999999999999999987654211100     0000 2468899999999999999998  899999999


Q ss_pred             CCCc-----------------------cchHHHHHhCC---CCCcEEEEecceeeecCC--C---CCCCCCCC--C----
Q 024575           81 GREA-----------------------DEVEPILDALP---NLEQFIYCSSAGVYLKSD--L---LPHCETDT--V----  123 (265)
Q Consensus        81 ~~~~-----------------------~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~--~---~~~~e~~~--~----  123 (265)
                      +...                       .++.+++++|.   ++++||++||.++||...  +   .+++|+..  .    
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            8521                       13456778765   378999999999998432  1   34555421  1    


Q ss_pred             ---Cccccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCCCchhHHHHHHHH---cCCcc--cCCC---CCCcee
Q 024575          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPI--PIPG---SGIQVT  187 (265)
Q Consensus       124 ---~~~~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~---~~~~~--~~~~---~~~~~~  187 (265)
                         .+.+.| .+|..+|+++.    ..+++++++||+++|||+....+ +.++..+.   .+...  ...+   .....+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSV-PSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCC-CchHHHHHHHhcCCccccccccccccccCce
Confidence               122245 99999999773    46899999999999999754322 22222222   23221  1111   111246


Q ss_pred             eeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      +|+|++|+|++++.+++.+.. ++.|++ ++..+++.|+++++.+.++.
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCC
Confidence            999999999999999987543 347854 56789999999999999973

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=1.5e-27  Score=192.55  Aligned_cols=212  Identities=20%  Similarity=0.253  Sum_probs=163.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cC-ccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~-~d~   75 (265)
                      |||||++|++++++|++.|++|++++|++++..              ..+++.+.+|+.|++++.++++.    .+ +|.
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            799999999999999999999999999987521              14677789999999999998831    26 999


Q ss_pred             EEEcCCCCc---cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhc-CCceeEe
Q 024575           76 VYDINGREA---DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL  149 (265)
Q Consensus        76 vi~~a~~~~---~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~-~~~~~i~  149 (265)
                      |+|+++...   ....+++++++  ++++||++||..++..                 ...+...|.++++. +++++++
T Consensus        71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~~~~~~~~~~l~~~~gi~~til  133 (285)
T TIGR03649        71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------GPAMGQVHAHLDSLGGVEYTVL  133 (285)
T ss_pred             EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------CchHHHHHHHHHhccCCCEEEE
Confidence            999987532   34678888877  8999999998654210                 01244567788775 9999999


Q ss_pred             ecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHH
Q 024575          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (265)
Q Consensus       150 r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~  229 (265)
                      ||++++++...    ......+.....+. .+.++..+++++++|+|++++.++.++...++.|++++++.+|+.|+++.
T Consensus       134 Rp~~f~~~~~~----~~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~  208 (285)
T TIGR03649       134 RPTWFMENFSE----EFHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEI  208 (285)
T ss_pred             eccHHhhhhcc----cccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHH
Confidence            99988865311    01112222333333 34567789999999999999999988766678999999999999999999


Q ss_pred             HHHHhCCCccccccceeeCCCcc
Q 024575          230 CAKVTGLLDFRSLNLCTTTPKSL  252 (265)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~~~~  252 (265)
                      +++.+|++.    +...++..++
T Consensus       209 l~~~~g~~v----~~~~~~~~~~  227 (285)
T TIGR03649       209 LSRVLGRKI----THVKLTEEEL  227 (285)
T ss_pred             HHHHhCCce----EEEeCCHHHH
Confidence            999999988    7777666543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.95  E-value=1.9e-26  Score=188.86  Aligned_cols=208  Identities=17%  Similarity=0.247  Sum_probs=160.1

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||+|++|++++++|+++|  ++|++++|+...... +..    ...  ..++.++.+|++|.+.+.++++  ++|+|||
T Consensus        10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~~----~~~--~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589        10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQQ----KFP--APCLRFFIGDVRDKERLTRALR--GVDYVVH   80 (324)
T ss_pred             eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HHH----HhC--CCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999986  789999987554210 000    000  1468899999999999999998  8999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +|+..                ..++.++++++.  ++++||++||...              ..|.+.| .+|..+|.++
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLF  146 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHH
Confidence            99863                124667888876  6789999998542              2234445 9999999987


Q ss_pred             h-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCC-cccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       140 ~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      +       ..+++++++||+++|||+.  .+++.+......+. .+++ .++.+.++|+|++|++++++.++++.. .++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~  222 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGE  222 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence            3       3589999999999999863  46666776666665 4555 367788999999999999999998753 356


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCC
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      +| ++++..+++.|+++.+.+..+.
T Consensus       223 ~~-~~~~~~~sv~el~~~i~~~~~~  246 (324)
T TIGR03589       223 IF-VPKIPSMKITDLAEAMAPECPH  246 (324)
T ss_pred             EE-ccCCCcEEHHHHHHHHHhhCCe
Confidence            77 4666679999999999997654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=5.8e-26  Score=182.65  Aligned_cols=229  Identities=19%  Similarity=0.223  Sum_probs=179.4

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||+||+|++++++|++++  .+|++++..+.........     .....+.++.+.+|+.|...+..++.  ++ .|+|
T Consensus        10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~-----~~~~~~~v~~~~~D~~~~~~i~~a~~--~~-~Vvh   81 (361)
T KOG1430|consen   10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAEL-----TGFRSGRVTVILGDLLDANSISNAFQ--GA-VVVH   81 (361)
T ss_pred             ECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhh-----hcccCCceeEEecchhhhhhhhhhcc--Cc-eEEE
Confidence            7999999999999999997  8999999887631110000     00013689999999999999999999  88 7887


Q ss_pred             cCCC----------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCC-CCCCCCCC--ccccc-cchhhHH
Q 024575           79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP-HCETDTVD--PKSRH-KGKLNTE  136 (265)
Q Consensus        79 ~a~~----------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~-~~e~~~~~--~~~~~-~~k~~~E  136 (265)
                      +++.                |+.++.+++++|.  +++++||+||..|........ .+|+.+..  ..+.| .+|..+|
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence            7664                5678999999988  999999999999987655533 33333322  22355 9999999


Q ss_pred             HHHhhc----CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh-----cCcc
Q 024575          137 SVLESK----GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-----GNEK  207 (265)
Q Consensus       137 ~~~~~~----~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~-----~~~~  207 (265)
                      +++.+.    ++..+.+||..||||++ ..+.+.++..+..+..+...++++...++++++-++.+.+.+.     ..+.
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd-~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~  240 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIYGPGD-KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS  240 (361)
T ss_pred             HHHHHhcCCCCeeEEEEccccccCCCC-ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence            998654    38899999999999975 4556677777888887766688888899999998877665442     3355


Q ss_pred             ccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          208 ASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       208 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ..|+.|+|++++++...+++..+.+.+|...
T Consensus       241 ~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~  271 (361)
T KOG1430|consen  241 VNGQFYFITDDTPVRFFDFLSPLVKALGYCL  271 (361)
T ss_pred             cCceEEEEeCCCcchhhHHHHHHHHhcCCCC
Confidence            6899999999999999999889999999887

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=8.5e-26  Score=188.63  Aligned_cols=232  Identities=18%  Similarity=0.199  Sum_probs=162.0

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccc--cCCCCCChh-HHh--hhh-ccceEEEecCCCh------HHHHH
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA--QQLPGESDQ-EFA--EFS-SKILHLKGDRKDY------DFVKS   66 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~--~~~~~~~~~-~~~--~~~-~~~~~~~~D~~~~------~~~~~   66 (265)
                      ||||||+|++++++|+++|  ++|+++.|+.+...  +.+.+.... .+.  ... .+++++.+|++++      +.+..
T Consensus         5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~   84 (367)
T TIGR01746         5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER   84 (367)
T ss_pred             eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence            7999999999999999998  67999999876311  000000000 000  001 5789999998753      45666


Q ss_pred             HhhccCccEEEEcCCC-------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCC-----Ccc
Q 024575           67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPK  126 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~-------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-----~~~  126 (265)
                      +..  ++|+|||+++.             +..++.++++++.  +.++|+++||.++|+.....+..++++.     .+.
T Consensus        85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR01746        85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA  162 (367)
T ss_pred             HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence            666  89999999984             3345777888876  6778999999999976433322333321     112


Q ss_pred             ccc-cchhhHHHHHhh---cCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCC-ceeeeeeHHHHH
Q 024575          127 SRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLA  196 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~~---~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a  196 (265)
                      +.| .+|..+|.++++   .+++++++|||.++|+...+     .++..++.........   .... ...++++++|++
T Consensus       163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~vddva  239 (367)
T TIGR01746       163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY---PDSPELTEDLTPVDYVA  239 (367)
T ss_pred             CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC---CCCCccccCcccHHHHH
Confidence            334 999999998753   48999999999999974322     2233333333333222   2223 357899999999


Q ss_pred             HHHHHHhcCccc--cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          197 RAFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       197 ~~~~~~~~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++++.++..+..  .+++||+++++++++.|+++.+.+ +|.+.
T Consensus       240 ~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~  282 (367)
T TIGR01746       240 RAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL  282 (367)
T ss_pred             HHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence            999999877653  267999999999999999999999 88876

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=1.3e-27  Score=186.79  Aligned_cols=234  Identities=19%  Similarity=0.266  Sum_probs=163.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccce----EEEecCCChHHHHHHhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL----HLKGDRKDYDFVKSSLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~~~~~~~~~~~~~~~~d~   75 (265)
                      |||+|.||+.|+++|++.+ .++++++|++.+...... ..++...  ..++.    ++.+|+.|.+.+..+++..++|+
T Consensus         4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~-~l~~~~~--~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELER-ELRSRFP--DPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHH-HCHHHC----TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHH-HHhhccc--ccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999986 689999999877321110 0000000  12343    45889999999999999899999


Q ss_pred             EEEcCCC----------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHH
Q 024575           76 VYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        76 vi~~a~~----------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (265)
                      |||+|+.                |+.++.|+++++.  ++++||++||+.+              .+|.+.+ .+|+.+|
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrlaE  146 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRLAE  146 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHHHH
Confidence            9999997                4567999999976  9999999999763              4567776 9999999


Q ss_pred             HHHhhc-------CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          137 SVLESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       137 ~~~~~~-------~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      +++...       +.+++++|+|+|.|.  .+++++.|..++.+++++.+ .+++..+-|+.+++.++.++.+..... .
T Consensus       147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS--~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~-~  222 (293)
T PF02719_consen  147 KLVQAANQYSGNSDTKFSSVRFGNVLGS--RGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK-G  222 (293)
T ss_dssp             HHHHHHCCTSSSS--EEEEEEE-EETTG--TTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH---T
T ss_pred             HHHHHHhhhCCCCCcEEEEEEecceecC--CCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC-C
Confidence            998432       468999999999986  47899999999999999887 467889999999999999999887654 4


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCccc--cccceeeCCCccccc
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLLDFR--SLNLCTTTPKSLTLV  255 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~  255 (265)
                      |++|.+-.|+++++.|+++.+.+..|.....  ..+++.....+.+..
T Consensus       223 geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlRpGEKl  270 (293)
T PF02719_consen  223 GEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLRPGEKL  270 (293)
T ss_dssp             TEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----TT--S
T ss_pred             CcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCCCCcce
Confidence            7899999999999999999999999864311  236676666655443

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=9.6e-26  Score=200.54  Aligned_cols=188  Identities=24%  Similarity=0.345  Sum_probs=152.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|++|++++|+....   .           ..++.++.+|+.|.+.+.++++  ++|+|||+|
T Consensus         6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA   69 (854)
T PRK05865          6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA   69 (854)
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence            79999999999999999999999999975331   1           1467899999999999999998  899999999


Q ss_pred             CCC-------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeec
Q 024575           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (265)
Q Consensus        81 ~~~-------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~  151 (265)
                      +..       ..++.+++++|+  ++++||++||..                        |..+|+++++++++++++||
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp  125 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC  125 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence            763       345778899887  778999999842                        78999999889999999999


Q ss_pred             ceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHH
Q 024575          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (265)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~  231 (265)
                      +++|||+.     ..++..... ..+...+++...++|+|++|++++++.+++++...++.||+++++.+|+.|+++.+.
T Consensus       126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~  199 (854)
T PRK05865        126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALG  199 (854)
T ss_pred             ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHh
Confidence            99999962     223333322 122223455567899999999999999987654446799999999999999999998


Q ss_pred             HHh
Q 024575          232 KVT  234 (265)
Q Consensus       232 ~~~  234 (265)
                      +..
T Consensus       200 ~~~  202 (854)
T PRK05865        200 RPM  202 (854)
T ss_pred             hhh
Confidence            753

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=1.9e-25  Score=180.97  Aligned_cols=219  Identities=16%  Similarity=0.183  Sum_probs=156.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc--cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++||+|++++|+.....  ..+..     +.....+++++.+|++|.+.+.+++.  ++|.|+|
T Consensus        12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~-----l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~   84 (297)
T PLN02583         12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRG-----LSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC   84 (297)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHh-----cccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999999643211  00000     00002468899999999999999998  9999999


Q ss_pred             cCCCC--------------ccchHHHHHhCC---CCCcEEEEecceeeec--C---CCCCCCCCCCCCcc------ccc-
Q 024575           79 INGRE--------------ADEVEPILDALP---NLEQFIYCSSAGVYLK--S---DLLPHCETDTVDPK------SRH-  129 (265)
Q Consensus        79 ~a~~~--------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~--~---~~~~~~e~~~~~~~------~~~-  129 (265)
                      +++..              ..++.++++++.   +++++|++||..++..  .   ...+++|+....+.      ..| 
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            76431              235778888865   4689999999876531  1   12345555432221      134 


Q ss_pred             cchhhHHHHH----hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       130 ~~k~~~E~~~----~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      .+|..+|+++    ++.+++++++||+++|||+..... .     ...+.. ....  ....+++|++|+|++++.+++.
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-~-----~~~~~~-~~~~--~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-P-----YLKGAA-QMYE--NGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-h-----hhcCCc-ccCc--ccCcceEEHHHHHHHHHHHhcC
Confidence            8999999987    346899999999999999753221 1     112221 1112  2346799999999999999998


Q ss_pred             ccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          206 EKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      +...+ +|.++++....+.++++++.+.++.
T Consensus       236 ~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        236 VSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             cccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence            76544 8988886656678899999998874

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=1.4e-25  Score=170.52  Aligned_cols=215  Identities=23%  Similarity=0.299  Sum_probs=180.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|||||+|++++++|.+.|.+|++-.|.++.....++-.      .-.+.+-+...|+.|+++++++.+  ..++|||+.
T Consensus        67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm------GdLGQvl~~~fd~~DedSIr~vvk--~sNVVINLI  138 (391)
T KOG2865|consen   67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM------GDLGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI  138 (391)
T ss_pred             ecccccccHHHHHHHhhcCCeEEEeccCCccchhheeec------ccccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence            599999999999999999999999999887754333210      002678899999999999999999  999999999


Q ss_pred             CC------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhcCCc
Q 024575           81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVN  145 (265)
Q Consensus        81 ~~------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~  145 (265)
                      |.            +...+.++...|+  ++.|||++|+..+             .....+.+ ++|...|..+++.-..
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-------------nv~s~Sr~LrsK~~gE~aVrdafPe  205 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-------------NVKSPSRMLRSKAAGEEAVRDAFPE  205 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-------------cccChHHHHHhhhhhHHHHHhhCCc
Confidence            86            3456788888888  9999999998763             12223344 9999999999998889


Q ss_pred             eeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCC-ceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHH
Q 024575          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (265)
Q Consensus       146 ~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (265)
                      .+|+||+.|||..  .+++.++.....+-..+++++.+. ..-..+++-|+|++|..++++|...|.+|..+|++.....
T Consensus       206 AtIirPa~iyG~e--Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~  283 (391)
T KOG2865|consen  206 ATIIRPADIYGTE--DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLS  283 (391)
T ss_pred             ceeechhhhcccc--hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHH
Confidence            9999999999974  567777777777778888887775 4478999999999999999999888999999999999999


Q ss_pred             HHHHHHHHHhCCCc
Q 024575          225 GLARACAKVTGLLD  238 (265)
Q Consensus       225 el~~~i~~~~g~~~  238 (265)
                      |+++.+.+...+-.
T Consensus       284 eLvd~my~~~~~~~  297 (391)
T KOG2865|consen  284 ELVDIMYDMAREWP  297 (391)
T ss_pred             HHHHHHHHHHhhcc
Confidence            99999999887644

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=5.1e-25  Score=183.09  Aligned_cols=230  Identities=19%  Similarity=0.261  Sum_probs=189.6

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||+|-+|+.+++++++.+ .+++.++|++.+.. ...    +++.+.  ...+.++-+|+.|.+.+..+++..++|+||
T Consensus       256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~-~i~----~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLY-LID----MELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHH-HHH----HHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            8999999999999999986 68999999987732 111    112211  257888999999999999999977799999


Q ss_pred             EcCCC----------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        78 ~~a~~----------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      |.|+.                |+-++.|++++|.  ++++||++||+.              ..+|.+-+ .+|+.+|++
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------AV~PtNvmGaTKr~aE~~  396 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------AVNPTNVMGATKRLAEKL  396 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------ccCCchHhhHHHHHHHHH
Confidence            99986                5668999999977  999999999865              55677776 999999999


Q ss_pred             Hhhc-------CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          139 LESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       139 ~~~~-------~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      +...       +-+++.+|+|+|.|.  .++.++.|..++.+|+++++ .+++..+-|+.+.|.++.++.+....+ .|+
T Consensus       397 ~~a~~~~~~~~~T~f~~VRFGNVlGS--rGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~-gGe  472 (588)
T COG1086         397 FQAANRNVSGTGTRFCVVRFGNVLGS--RGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK-GGE  472 (588)
T ss_pred             HHHHhhccCCCCcEEEEEEecceecC--CCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC-CCc
Confidence            8432       368999999999997  47899999999999999887 578889999999999999999887755 588


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCccc
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      +|-+..|++++..|+++.+.+..|.......+|+...-.+.+
T Consensus       473 ifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGE  514 (588)
T COG1086         473 IFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGE  514 (588)
T ss_pred             EEEEcCCCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCch
Confidence            999999999999999999999998444333366666555443

>PLN02778 3,5-epimerase/4-reductase

Probab=99.92  E-value=4.9e-24  Score=172.43  Aligned_cols=197  Identities=14%  Similarity=0.130  Sum_probs=146.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||+|++|++.|+++|++|+...+                             |+.+.+.+...+...++|+|||+|
T Consensus        15 tG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------------~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778         15 YGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------------RLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------------ccCCHHHHHHHHHhcCCCEEEECC
Confidence            799999999999999999999875321                             234555666666656899999999


Q ss_pred             CCCc-------------------cchHHHHHhCC--CCCcEEEEecceeeecCC------CCCCCCCCCCC-ccccc-cc
Q 024575           81 GREA-------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVD-PKSRH-KG  131 (265)
Q Consensus        81 ~~~~-------------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~------~~~~~e~~~~~-~~~~~-~~  131 (265)
                      +...                   .++.+++++|+  ++ +++++||.++|+...      +.+++|++.+. +.+.| .+
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s  144 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT  144 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence            8631                   13667888887  55 467777788886432      22466666554 43556 99


Q ss_pred             hhhHHHHHhhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       132 k~~~E~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      |..+|.+++.+. +..++|++..+|++..  ....++..+..++.+...+     .++++++|++++++.+++...  ++
T Consensus       145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence            999999997653 6778999887876421  2234667777666543322     379999999999999997654  35


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      .||+++++.+|+.|+++.+++.+|.+
T Consensus       215 ~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        215 IYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            99999999999999999999999964

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.92  E-value=2.4e-25  Score=174.45  Aligned_cols=212  Identities=23%  Similarity=0.345  Sum_probs=156.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +||||.+|+.+++.|++.+++|++++|++++.. ..+.          ..+++++.+|+.|.+++.++++  ++|+||.+
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----------~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----------ALGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----------HTTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----------cccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            699999999999999999999999999985421 1111          3688999999999999999999  99999999


Q ss_pred             CCCC----ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-cccchhhHHHHHhhcCCceeEeecc
Q 024575           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPV  152 (265)
Q Consensus        80 a~~~----~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~~~~k~~~E~~~~~~~~~~~i~r~~  152 (265)
                      .+..    .....+++++++  ++++||+.|....+        .+.....|.. .+..|..+|+++++.+++|+++|+|
T Consensus        72 ~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~--------~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g  143 (233)
T PF05368_consen   72 TPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADY--------DESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPG  143 (233)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGT--------TTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-
T ss_pred             cCcchhhhhhhhhhHHHhhhccccceEEEEEecccc--------cccccccccchhhhhhhhhhhhhhhccccceecccc
Confidence            8854    345778999987  99999976654432        1111222322 3478999999999999999999999


Q ss_pred             eeeCCCCCCchhHHHHH--HHHcCC-cccCCCCCCceeeee-eHHHHHHHHHHHhcCcccc--CceEEecCCCccCHHHH
Q 024575          153 YIYGPLNYNPVEEWFFH--RLKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGL  226 (265)
Q Consensus       153 ~i~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i-~~~D~a~~~~~~~~~~~~~--~~~~~i~~~~~~s~~el  226 (265)
                      +++...     ...+..  .....+ .+.++++++....++ +.+|+++++..++.++...  ++.+.+++ +.+|+.|+
T Consensus       144 ~f~e~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  144 FFMENL-----LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             EEHHHH-----HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHH
T ss_pred             chhhhh-----hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHH
Confidence            876531     111111  111111 345556777666665 9999999999999887654  56777766 78999999


Q ss_pred             HHHHHHHhCCCc
Q 024575          227 ARACAKVTGLLD  238 (265)
Q Consensus       227 ~~~i~~~~g~~~  238 (265)
                      ++.+++.+|++.
T Consensus       218 a~~~s~~~G~~v  229 (233)
T PF05368_consen  218 AAILSKVLGKKV  229 (233)
T ss_dssp             HHHHHHHHTSEE
T ss_pred             HHHHHHHHCCcc
Confidence            999999999987

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=7.5e-25  Score=165.41  Aligned_cols=175  Identities=31%  Similarity=0.452  Sum_probs=136.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||||++|+.++++|+++|++|++++|++.+...             ..+++++.+|+.|++.+.+++.  ++|+||+++
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~   68 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA   68 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence            6999999999999999999999999999886332             2799999999999999999999  999999999


Q ss_pred             CCC---ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeecceee
Q 024575           81 GRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (265)
Q Consensus        81 ~~~---~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~~~i~  155 (265)
                      +..   ....++++++++  +++++|++|+.++|......... ........++..|...|+.+++.+++|+++||+.+|
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~  147 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSD-EDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY  147 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEG-GTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred             hhhcccccccccccccccccccccceeeeccccCCCCCccccc-ccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence            854   345678888887  88999999999998643332111 111112334588889999999899999999999999


Q ss_pred             CCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      |+...             ...+.. ..+....++|+.+|+|+++++++++
T Consensus       148 ~~~~~-------------~~~~~~-~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  148 GNPSR-------------SYRLIK-EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             BTTSS-------------SEEEES-STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             eCCCc-------------ceeEEe-ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            98521             111111 1334556999999999999998864

...

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=1.3e-23  Score=159.86  Aligned_cols=235  Identities=20%  Similarity=0.172  Sum_probs=184.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||-||+-|++|++.|+++||+|+++.|+.+......-.+..-... ...++.++.+|++|...+.++++..+||.|+|++
T Consensus         8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~-~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa   86 (345)
T COG1089           8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHL-NDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA   86 (345)
T ss_pred             ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccccc-CCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence            799999999999999999999999999865532211010000000 0245889999999999999999999999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C--CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           81 GRE----------------ADEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +.+                .-++.+++++++  +  ..||...||...||.....|..|..|+.|.++| .+|..+..+.
T Consensus        87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089          87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence            874                235889999987  3  468999999999999999999999999999998 8887776654


Q ss_pred             ----hhcCCceeEeecceeeCCCCCCch----hHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          140 ----ESKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       140 ----~~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                          ..+|+..+.=...+--+|.....|    +...+..+..|.. .-..|+-+..+||-|..|.+++++.+++++.  +
T Consensus       167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~--P  244 (345)
T COG1089         167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE--P  244 (345)
T ss_pred             eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC--C
Confidence                457777776555555566543333    3344455555542 2234888999999999999999999999987  4


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +.|.++.++..|++|+++...+..|.+.
T Consensus       245 ddyViATg~t~sVrefv~~Af~~~g~~l  272 (345)
T COG1089         245 DDYVIATGETHSVREFVELAFEMVGIDL  272 (345)
T ss_pred             CceEEecCceeeHHHHHHHHHHHcCceE
Confidence            7899999999999999999999999765

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.91  E-value=3e-23  Score=164.31  Aligned_cols=207  Identities=17%  Similarity=0.132  Sum_probs=147.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHh-hccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~-~~~~~d~vi~   78 (265)
                      |||||++|++++++|+++|++|++++|++.+.......         ..+++++.+|+++ .+.+.+.+ .  ++|+||+
T Consensus        23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~   91 (251)
T PLN00141         23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC   91 (251)
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence            79999999999999999999999999987653221111         2468999999998 46676666 5  8999999


Q ss_pred             cCCCCc------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCC-CCcccc-ccchhhHHHHHhhc
Q 024575           79 INGREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSR-HKGKLNTESVLESK  142 (265)
Q Consensus        79 ~a~~~~------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~-~~~~~~-~~~k~~~E~~~~~~  142 (265)
                      +++...            .++.+++++++  ++++||++||.++|+...+.+...... ..+... +..|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            987632            13678888877  788999999999987543322211100 011112 25688899999889


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCC---C
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE---K  219 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~---~  219 (265)
                      +++++++||++++++.....             .....+ ......+++.+|+|++++.++.++...+.++.+.+.   .
T Consensus       172 gi~~~iirpg~~~~~~~~~~-------------~~~~~~-~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTGN-------------IVMEPE-DTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCCce-------------EEECCC-CccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            99999999999998642111             111111 111235799999999999999887766677888762   2


Q ss_pred             ccCHHHHHHHHHH
Q 024575          220 YVTFDGLARACAK  232 (265)
Q Consensus       220 ~~s~~el~~~i~~  232 (265)
                      ..++.++...+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            3688888877764

>PRK12320 hypothetical protein; Provisional

Probab=99.91  E-value=5.8e-23  Score=179.43  Aligned_cols=185  Identities=13%  Similarity=0.121  Sum_probs=141.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||+|+++++.|+++|++|++++|.+...    .          ..+++++.+|+.+.. +.+++.  ++|+|||++
T Consensus         6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~----------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA   68 (699)
T PRK12320          6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----L----------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA   68 (699)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----c----------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence            79999999999999999999999999875431    1          257889999999985 777887  899999999


Q ss_pred             CCC--------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeec
Q 024575           81 GRE--------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (265)
Q Consensus        81 ~~~--------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~  151 (265)
                      +..        ..++.+++++|+ ...++||+||..  |...              .   ....|.++...+++++++|+
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~--G~~~--------------~---~~~aE~ll~~~~~p~~ILR~  129 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAGARLLFVSQAA--GRPE--------------L---YRQAETLVSTGWAPSLVIRI  129 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcCCeEEEEECCC--CCCc--------------c---ccHHHHHHHhcCCCEEEEeC
Confidence            854        245778999987 324799999762  2110              0   12578888877899999999


Q ss_pred             ceeeCCCCCC---chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHH
Q 024575          152 VYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR  228 (265)
Q Consensus       152 ~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~  228 (265)
                      +++|||+...   .++..++.....+          +.+.++|++|++++++.+++.+.  +++||+++++.+|+.|+++
T Consensus       130 ~nVYGp~~~~~~~r~I~~~l~~~~~~----------~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~~  197 (699)
T PRK12320        130 APPVGRQLDWMVCRTVATLLRSKVSA----------RPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAWR  197 (699)
T ss_pred             ceecCCCCcccHhHHHHHHHHHHHcC----------CceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHHH
Confidence            9999996432   2333333322222          33456999999999999987643  3499999999999999999


Q ss_pred             HHHHH
Q 024575          229 ACAKV  233 (265)
Q Consensus       229 ~i~~~  233 (265)
                      .+...
T Consensus       198 ~i~~~  202 (699)
T PRK12320        198 LLRSV  202 (699)
T ss_pred             HHHHh
Confidence            99776

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.90  E-value=2.7e-23  Score=164.17  Aligned_cols=197  Identities=20%  Similarity=0.189  Sum_probs=112.7

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCcc--ccCCCC-CChhHHh-----hhhccceEEEecCCCh------HHH
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI--AQQLPG-ESDQEFA-----EFSSKILHLKGDRKDY------DFV   64 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~--~~~~~~-~~~~~~~-----~~~~~~~~~~~D~~~~------~~~   64 (265)
                      ||||||+|++|+++|++.+.  +|+++.|..+..  .+.+.+ .....+.     ....+++++.+|++++      +.+
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~   81 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY   81 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence            89999999999999999876  999999987541  111110 0001111     2257999999999974      456


Q ss_pred             HHHhhccCccEEEEcCCC-------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCC------CCCC---
Q 024575           65 KSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP------HCET---  120 (265)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~------~~e~---  120 (265)
                      ..+.+  ++|+|||+|+.             |+.+++++++.|.  +.++|+|+||..+.+...+..      ..+.   
T Consensus        82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~  159 (249)
T PF07993_consen   82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD  159 (249)
T ss_dssp             HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred             hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence            66767  99999999986             4567899999977  566999999955544333211      0011   


Q ss_pred             CCCCccccc-cchhhHHHHHhh----cCCceeEeecceeeCCCC-----CCc-hhHHHHHHHHcCCcccCCCCCCceeee
Q 024575          121 DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN-----YNP-VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      ......+.| .+|+.+|+++++    .+++++|+|||.|+|...     ... +...+...+..+......++.....++
T Consensus       160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~  239 (249)
T PF07993_consen  160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL  239 (249)
T ss_dssp             --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred             hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence            111222334 999999999853    389999999999999432     233 233334444444433445555667999


Q ss_pred             eeHHHHHHHH
Q 024575          190 GHVKDLARAF  199 (265)
Q Consensus       190 i~~~D~a~~~  199 (265)
                      +++|.+|++|
T Consensus       240 vPVD~va~aI  249 (249)
T PF07993_consen  240 VPVDYVARAI  249 (249)
T ss_dssp             EEHHHHHHHH
T ss_pred             ECHHHHHhhC
Confidence            9999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=2.4e-22  Score=173.71  Aligned_cols=233  Identities=17%  Similarity=0.150  Sum_probs=158.2

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEcCCCcc--ccCCC-----CCChhHHhh---------hhccceEEEecCCCh
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPI--AQQLP-----GESDQEFAE---------FSSKILHLKGDRKDY   61 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~--~~~~~-----~~~~~~~~~---------~~~~~~~~~~D~~~~   61 (265)
                      ||||||+|++|++.|++.+.   +|+++.|.....  .+.+.     ......+.+         ...++.++.+|++++
T Consensus       125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~  204 (605)
T PLN02503        125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES  204 (605)
T ss_pred             cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence            89999999999999998753   789999976542  11110     000001101         024689999999986


Q ss_pred             ------HHHHHHhhccCccEEEEcCCCC-------------ccchHHHHHhCC---CCCcEEEEecceeeecCCCC----
Q 024575           62 ------DFVKSSLSAKGFDVVYDINGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLL----  115 (265)
Q Consensus        62 ------~~~~~~~~~~~~d~vi~~a~~~-------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~----  115 (265)
                            +....+.+  ++|+|||+|+..             +.++.+++++++   ..++|||+||.++||...+.    
T Consensus       205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~  282 (605)
T PLN02503        205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK  282 (605)
T ss_pred             ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeee
Confidence                  34555555  799999999862             345778888875   46889999999999865321    


Q ss_pred             CCCCC---------------------------------C----------------------CCCccccccchhhHHHHHh
Q 024575          116 PHCET---------------------------------D----------------------TVDPKSRHKGKLNTESVLE  140 (265)
Q Consensus       116 ~~~e~---------------------------------~----------------------~~~~~~~~~~k~~~E~~~~  140 (265)
                      ++...                                 .                      ..-|..|..+|..+|.+++
T Consensus       283 ~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~  362 (605)
T PLN02503        283 PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVIN  362 (605)
T ss_pred             ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHH
Confidence            11100                                 0                      0012333489999999996


Q ss_pred             h--cCCceeEeeccee----------eCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC-c-
Q 024575          141 S--KGVNWTSLRPVYI----------YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E-  206 (265)
Q Consensus       141 ~--~~~~~~i~r~~~i----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~-  206 (265)
                      +  .+++++|+||+.|          |+++.. .+.+ .+.....|..-.++++++...|+|++|.++++++.+... . 
T Consensus       363 ~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~-~~~p-~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~  440 (605)
T PLN02503        363 SMRGDIPVVIIRPSVIESTWKDPFPGWMEGNR-MMDP-IVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG  440 (605)
T ss_pred             HhcCCCCEEEEcCCEecccccCCccccccCcc-ccch-hhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc
Confidence            5  3799999999999          444311 1111 111222343223567888999999999999999888421 1 


Q ss_pred             --cccCceEEecCC--CccCHHHHHHHHHHHhCCC
Q 024575          207 --KASRQVFNISGE--KYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       207 --~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~  237 (265)
                        ...+++||++++  +++++.++.+.+.+.+...
T Consensus       441 ~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~  475 (605)
T PLN02503        441 AAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS  475 (605)
T ss_pred             ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence              124679999988  8999999999999877654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.88  E-value=7.3e-22  Score=145.58  Aligned_cols=222  Identities=20%  Similarity=0.277  Sum_probs=172.3

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||++|-+|+++.+.+.+.|.  +-.++.-.                         -.+|+++..+.+.+++..++..|||
T Consensus         7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------------kd~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------------KDADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             ecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------------ccccccchHHHHHHHhccCCceeee
Confidence            79999999999999998765  22222221                         1458899999999999999999999


Q ss_pred             cCCC-----------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC----CCCcccc-c-cchh
Q 024575           79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL  133 (265)
Q Consensus        79 ~a~~-----------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~----~~~~~~~-~-~~k~  133 (265)
                      +|+.                 |..-..|++..+.  ++++++++.|.++|.+-...|++|..    ++.|.++ | -+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9875                 2333557777766  99999999999999988888888865    4455555 3 6776


Q ss_pred             hHHHHH----hhcCCceeEeecceeeCCCC-----CCchhHHHHHHHH----cCC-cccCCCCCCceeeeeeHHHHHHHH
Q 024575          134 NTESVL----ESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLK----AGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       134 ~~E~~~----~~~~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      ++.-..    .+.|..++.+-|+++|||.+     .+..++.++++..    .+. ++.+||+|...++|+|.+|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            655432    46799999999999999974     3556666666653    233 688899999999999999999999


Q ss_pred             HHHhcCccccCceEEecCCC--ccCHHHHHHHHHHHhCCCccccccceeeCCCcc
Q 024575          200 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKVTGLLDFRSLNLCTTTPKSL  252 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~  252 (265)
                      ++++.+-.. -+..+++.++  .+|+.|+++++.++++...    +.++...++-
T Consensus       222 i~vlr~Y~~-vEpiils~ge~~EVtI~e~aeaV~ea~~F~G----~l~~DttK~D  271 (315)
T KOG1431|consen  222 IWVLREYEG-VEPIILSVGESDEVTIREAAEAVVEAVDFTG----KLVWDTTKSD  271 (315)
T ss_pred             HHHHHhhcC-ccceEeccCccceeEHHHHHHHHHHHhCCCc----eEEeeccCCC
Confidence            999987543 3456677666  7999999999999999998    7777765543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.85  E-value=2.8e-20  Score=178.98  Aligned_cols=230  Identities=18%  Similarity=0.186  Sum_probs=159.2

Q ss_pred             CCccccchHHHHHHHHHcC----CeEEEEEcCCCccccCCCCCChhHH-------hhhhccceEEEecCCC------hHH
Q 024575            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEF-------AEFSSKILHLKGDRKD------YDF   63 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~------~~~   63 (265)
                      ||||||+|++++++|++++    ++|+++.|....... .... ....       .....+++++.+|+++      .+.
T Consensus       977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l-~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~ 1054 (1389)
T TIGR03443       977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERL-RKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEK 1054 (1389)
T ss_pred             eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHH-HHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHH
Confidence            7999999999999999886    899999997654211 0000 0000       0112478999999974      455


Q ss_pred             HHHHhhccCccEEEEcCCC-------------CccchHHHHHhCC--CCCcEEEEecceeeecCC------------CCC
Q 024575           64 VKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD------------LLP  116 (265)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~------------~~~  116 (265)
                      +.++..  ++|+|||+|+.             |+.++.++++++.  +.++|+|+||.++|+...            ...
T Consensus      1055 ~~~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~ 1132 (1389)
T TIGR03443      1055 WSDLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAG 1132 (1389)
T ss_pred             HHHHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCC
Confidence            666666  89999999885             3445778888876  678999999999996321            112


Q ss_pred             CCCCCCC-----Cccc-cccchhhHHHHHhh---cCCceeEeecceeeCCCCCCc-----hhHHHHHHHHcCCcccCCCC
Q 024575          117 HCETDTV-----DPKS-RHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGS  182 (265)
Q Consensus       117 ~~e~~~~-----~~~~-~~~~k~~~E~~~~~---~~~~~~i~r~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~  182 (265)
                      +.|+...     .+.+ |..+|+.+|.++..   .+++++++||+.|||++..+.     ++..++.....   +....+
T Consensus      1133 ~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~---~~~~p~ 1209 (1389)
T TIGR03443      1133 IPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ---LGLIPN 1209 (1389)
T ss_pred             CCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH---hCCcCC
Confidence            2333211     1223 44999999999843   589999999999999864322     22223322222   222234


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ....+++++++|++++++.++.++.  ..+.+||++++..+++.++++.+.+. |.+.
T Consensus      1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443      1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred             CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence            4567899999999999999987653  23458999999899999999999764 6554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=6.3e-20  Score=146.36  Aligned_cols=233  Identities=15%  Similarity=0.132  Sum_probs=149.1

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccc--cCCCCC---ChhHHhhhhccceEEEecCCC------hHHHHHHh
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA--QQLPGE---SDQEFAEFSSKILHLKGDRKD------YDFVKSSL   68 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~   68 (265)
                      ||||||+|.++++.|+.+- .+|++++|..+...  .++.+.   ..........+++++.+|+..      ...+.++.
T Consensus         6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La   85 (382)
T COG3320           6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA   85 (382)
T ss_pred             ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence            8999999999999999874 69999999887421  111110   000011224689999999984      45677777


Q ss_pred             hccCccEEEEcCCC-------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCC----CCCCCC------
Q 024575           69 SAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPH----CETDTV------  123 (265)
Q Consensus        69 ~~~~~d~vi~~a~~-------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~----~e~~~~------  123 (265)
                      +  .+|.|||+++.             |+.++..+++.+.  +.|.|+|+||++++........    +++++.      
T Consensus        86 ~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~  163 (382)
T COG3320          86 E--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQG  163 (382)
T ss_pred             h--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCc
Confidence            7  89999999875             5678899999866  7889999999999864322111    111111      


Q ss_pred             CccccccchhhHHHHHhh---cCCceeEeecceeeCCCC-----CCchhHHHHHHHHcCCcccCCCCCCceeeeeeH---
Q 024575          124 DPKSRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV---  192 (265)
Q Consensus       124 ~~~~~~~~k~~~E~~~~~---~~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---  192 (265)
                      ...+|.+||+.+|+++++   .|++++|+|||+|.|+..     ...++..++....+-..++   +.....+.+.+   
T Consensus       164 ~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~~~p~~~v  240 (382)
T COG3320         164 LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLDMLPVDHV  240 (382)
T ss_pred             cCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---CcccchhhCcccee
Confidence            123455999999999964   589999999999999864     2334445555544443332   11222233332   


Q ss_pred             --------HHHHHHHHHHhcCccccCceEE-ecCCCccCHHHHHHHHHH--HhCCCc
Q 024575          193 --------KDLARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK--VTGLLD  238 (265)
Q Consensus       193 --------~D~a~~~~~~~~~~~~~~~~~~-i~~~~~~s~~el~~~i~~--~~g~~~  238 (265)
                              .-+++++..+..++...-..|+ ..-|..+...++.+...+  ..+.+.
T Consensus       241 ~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~~  297 (382)
T COG3320         241 ARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLISLDIAGYPE  297 (382)
T ss_pred             eEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhhhhccCCch
Confidence                    3333344444433322112333 334778999999998888  444443

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=1e-20  Score=160.90  Aligned_cols=214  Identities=17%  Similarity=0.169  Sum_probs=142.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh--h--hhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA--E--FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|+..+............+.  .  ...++.++.+|+.+.+++.+++.  ++|+|
T Consensus        86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV  163 (576)
T PLN03209         86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV  163 (576)
T ss_pred             ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            799999999999999999999999999876532111000000000  0  01358899999999999999998  99999


Q ss_pred             EEcCCCCc--------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc-ccccchhhHHHHH
Q 024575           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVL  139 (265)
Q Consensus        77 i~~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~~~~~k~~~E~~~  139 (265)
                      ||++|...              .++.++++++.  ++++||++||.+++...  .+  .. ..... .++..|..+|+.+
T Consensus       164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--~p--~~-~~~sk~~~~~~KraaE~~L  238 (576)
T PLN03209        164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--FP--AA-ILNLFWGVLCWKRKAEEAL  238 (576)
T ss_pred             EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--cc--cc-chhhHHHHHHHHHHHHHHH
Confidence            99998632              24677888876  78999999998763111  00  00 11111 2236788999999


Q ss_pred             hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc-ccCceEEecCC
Q 024575          140 ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE  218 (265)
Q Consensus       140 ~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~  218 (265)
                      ++.|++|++||||+++++.+... .        .+. +............+..+|+|++++.++.++. ..+.+|.+.++
T Consensus       239 ~~sGIrvTIVRPG~L~tp~d~~~-~--------t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~  308 (576)
T PLN03209        239 IASGLPYTIVRPGGMERPTDAYK-E--------THN-LTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE  308 (576)
T ss_pred             HHcCCCEEEEECCeecCCccccc-c--------ccc-eeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence            99999999999999988742110 0        011 1111111111234788999999999998664 56789999886


Q ss_pred             CccCHHHHHHHHH
Q 024575          219 KYVTFDGLARACA  231 (265)
Q Consensus       219 ~~~s~~el~~~i~  231 (265)
                      .......+.+++.
T Consensus       309 ~~~p~~~~~~~~~  321 (576)
T PLN03209        309 TTAPLTPMEELLA  321 (576)
T ss_pred             CCCCCCCHHHHHH
Confidence            5443344444443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=7.7e-20  Score=163.61  Aligned_cols=194  Identities=17%  Similarity=0.181  Sum_probs=142.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+||||++|++.|.++|++|..                             ..+|++|.+.+...+...++|+|||||
T Consensus       386 tGa~G~iG~~l~~~L~~~g~~v~~-----------------------------~~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        386 YGRTGWIGGLLGKLCEKQGIAYEY-----------------------------GKGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEe-----------------------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence            799999999999999999988731                             013567888888888877899999999


Q ss_pred             CCC-------------------ccchHHHHHhCC--CCCcEEEEecceeeecC------CCCCCCCCCCCCcc-ccc-cc
Q 024575           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPK-SRH-KG  131 (265)
Q Consensus        81 ~~~-------------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~------~~~~~~e~~~~~~~-~~~-~~  131 (265)
                      +..                   ..++.+++++|+  ++ +++++||..+|+..      ...|+.|++.+.|. +.| .+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            853                   224678889887  55 57788888998642      23467777666543 556 99


Q ss_pred             hhhHHHHHhhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       132 k~~~E~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      |..+|.+++.. -+..++|+.++|+.+...  ...++..+.+... +.++      .+...++|++.+++.+++...  +
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~~--~  584 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRNL--R  584 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhCC--C
Confidence            99999999776 478889999999743211  1123333333332 3332      246778889988888887432  5


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhC
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      ++||+++++.+|+.|+++.+.+.++
T Consensus       585 giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        585 GIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             ceEEecCCCcCcHHHHHHHHHHhcC
Confidence            7999999999999999999999885

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.81  E-value=3.7e-19  Score=133.16  Aligned_cols=233  Identities=17%  Similarity=0.186  Sum_probs=172.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||-||.-|++|++.|+.+||+|+++.|+.+.-. ..+.++...........+.+.++|++|...+.+++...+++-|+|+
T Consensus        34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL  113 (376)
T KOG1372|consen   34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL  113 (376)
T ss_pred             ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence            689999999999999999999999999887621 1222211111111135689999999999999999998899999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+.+                ..++.+++++++     ..-||...||...||+....|..|..|+.|.+.| .+|...-.
T Consensus       114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence            8863                346788888854     4468999999999999999999999999999988 77766554


Q ss_pred             HH----hhcCCceeEeecceee---CCCCCCchhH----HHHHHHHcCC-cccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          138 VL----ESKGVNWTSLRPVYIY---GPLNYNPVEE----WFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       138 ~~----~~~~~~~~i~r~~~i~---g~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      ++    ..+++-.+   .|.+|   +|....+|..    .-+..+.-++ .....|+.+..+||-|..|.+++++.++++
T Consensus       194 ivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  194 IVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             EEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc
Confidence            43    23443222   34444   3443334433    2333333333 233347788899999999999999999998


Q ss_pred             ccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          206 EKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +.+  ..|.|..++..|++|+.+.--...|...
T Consensus       271 d~P--dDfViATge~hsVrEF~~~aF~~ig~~l  301 (376)
T KOG1372|consen  271 DSP--DDFVIATGEQHSVREFCNLAFAEIGEVL  301 (376)
T ss_pred             CCC--CceEEecCCcccHHHHHHHHHHhhCcEE
Confidence            774  5789999999999999999888888543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=4.7e-18  Score=136.45  Aligned_cols=206  Identities=23%  Similarity=0.263  Sum_probs=158.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++|++|++++|++......            ..+++++.+|+.+...+...+.  +.|.++++.
T Consensus         6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~------------~~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~   71 (275)
T COG0702           6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL------------AGGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS   71 (275)
T ss_pred             EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh------------cCCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence            79999999999999999999999999998874221            1689999999999999999999  999999887


Q ss_pred             CCCc-------cch---HHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEe
Q 024575           81 GREA-------DEV---EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (265)
Q Consensus        81 ~~~~-------~~~---~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~  149 (265)
                      +...       ...   .+..+++. +.++++++|.....            ...+..+..+|..+|..+.+.++.++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD------------AASPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCC------------CCCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            7432       112   23333344 57888888876641            2233445589999999999999999999


Q ss_pred             ecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHH
Q 024575          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (265)
Q Consensus       150 r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~  229 (265)
                      |+..+|.......    .......+.+.....  ....+++..+|++.++...+..+...++.|.+++++..+..++++.
T Consensus       140 r~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~  213 (275)
T COG0702         140 RRAAFYLGAGAAF----IEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASG  213 (275)
T ss_pred             ecCeeeeccchhH----HHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHH
Confidence            9776665431111    112222333322222  2378999999999999999998877789999999999999999999


Q ss_pred             HHHHhCCCc
Q 024575          230 CAKVTGLLD  238 (265)
Q Consensus       230 i~~~~g~~~  238 (265)
                      +.+..|++.
T Consensus       214 l~~~~gr~~  222 (275)
T COG0702         214 LDYTIGRPV  222 (275)
T ss_pred             HHHHhCCcc
Confidence            999999988

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.8e-19  Score=140.83  Aligned_cols=207  Identities=17%  Similarity=0.181  Sum_probs=140.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.|++.... .+.       .....++.++.+|++|.+++.+++.+     .++|+
T Consensus         8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~-~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          8 TGASSGFGRGMTERLLARGDRVAATVRRPDALD-DLK-------ARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-------HhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999864421 110       01124688999999999988877652     25899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||++|...                    .++.++++++    +  +.+++|++||.....           ...+.+.|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  148 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------AYPGFSLY  148 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------CCCCCchh
Confidence            999998631                    1233455553    3  567999999976421           11123345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeeccee---eCCCCCC--------chhHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i---~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                       .+|..+|.+++       ..+++++++|||.+   ||++...        ......+...........         +.
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  219 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI---------PG  219 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC---------CC
Confidence             89999887763       25899999999988   5543211        001111112222222211         24


Q ss_pred             eHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      +++|++++++.++..+.. +..|++++++..+..|+++.+.+.++.
T Consensus       220 d~~~~~~a~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~  264 (276)
T PRK06482        220 DPQKMVQAMIASADQTPA-PRRLTLGSDAYASIRAALSERLAALEA  264 (276)
T ss_pred             CHHHHHHHHHHHHcCCCC-CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence            689999999999986643 457999999888888888877777653

>PRK09135 pteridine reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=138.09  Aligned_cols=198  Identities=20%  Similarity=0.203  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|++|++++++|+++|++|++++|+.......+.    ..+... ...+.++.+|++|.+++..+++.     .++|
T Consensus        12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135         12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987543221111    001110 13578899999999998887763     2589


Q ss_pred             EEEEcCCCC--------------------ccchHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +|||++|..                    ..++.++++++.     ....++.+++..           +..+..+...|
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Y  156 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPLKGYPVY  156 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCCCCchhH
Confidence            999999852                    223445666542     233455555422           12334445556


Q ss_pred             -cchhhHHHHHhh------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 -~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                       .+|..+|.+++.      .+++++++||+.++||.....+.............+...         .+++|+++++..+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~d~a~~~~~~  227 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRI---------GTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCC---------cCHHHHHHHHHHH
Confidence             999999988742      368999999999999975433333333233322222111         2379999999666


Q ss_pred             hcC-ccccCceEEecCCCccC
Q 024575          203 LGN-EKASRQVFNISGEKYVT  222 (265)
Q Consensus       203 ~~~-~~~~~~~~~i~~~~~~s  222 (265)
                      +.. +...|++|+++++..++
T Consensus       228 ~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCccccccCcEEEECCCeecc
Confidence            643 33468899999987654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=6.2e-18  Score=133.71  Aligned_cols=196  Identities=18%  Similarity=0.207  Sum_probs=131.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||||++|++++++|+++|++|+++.|+..+....+.    ........++.++.+|+.+.+++.++++.     .++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888887654221111    11111135688999999999988887753     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +..++++++    +  +.+++|++||...+...           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----------~~~~~y  156 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----------PGRSNY  156 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------CCchHH
Confidence            9999985311                    122333432    3  67899999998765221           112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+++       +.+++++++|||.++++.............   ....       ....+++.+|+++++..
T Consensus       157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~dva~~~~~  226 (249)
T PRK12825        157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DAET-------PLGRSGTPEDIARAVAF  226 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hccC-------CCCCCcCHHHHHHHHHH
Confidence             78887776652       358999999999999986432222111111   0011       12238899999999999


Q ss_pred             HhcCc--cccCceEEecCCCcc
Q 024575          202 VLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      ++.++  ...|+.|+++++..+
T Consensus       227 ~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        227 LCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HhCccccCcCCCEEEeCCCEee
Confidence            99664  346899999987654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.78  E-value=3.9e-18  Score=136.02  Aligned_cols=203  Identities=15%  Similarity=0.114  Sum_probs=133.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|++|+++.|+++......     ..+......+.++++|+++.+.+.++++.     ..+|+
T Consensus        13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394         13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVA-----DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-----HHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875421111     11111124577899999999988877763     24899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhC-C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~-~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+++....                    +    +.++++++ +  +.+++|++||...+..           ..+...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  156 (262)
T PRK13394         88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----------SPLKSA  156 (262)
T ss_pred             EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----------CCCCcc
Confidence            9999986311                    1    44566666 4  6789999999654311           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHH-cC-C-cccCCCCCCceeeeeeHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AG-R-PIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      | .+|...+.+++       ..+++++++||+.+++|.....+ ........ .. . ...++..+....++++++|+++
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQI-PEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhh-HhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            4 78887776653       35899999999999998521111 11100000 00 0 0011122334568999999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++.++..+.  ..|+.|++.++..
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCcee
Confidence            9999987643  2478899987643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=132.90  Aligned_cols=198  Identities=16%  Similarity=0.192  Sum_probs=130.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.+.....     ..+.....++.++.+|+++++++.++++.     ..+|+
T Consensus        10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429         10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876522111     11111134688899999999988877763     26899


Q ss_pred             EEEcCCCCc--------------------cc----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++...                    .+    +..++.+++  +.++||++||...+..           ..+.+.|
T Consensus        85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  153 (258)
T PRK12429         85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----------SAGKAAY  153 (258)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCcchh
Confidence            999998521                    11    344555554  6789999998765421           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcC--Ccc-----cCCCCCCceeeeeeHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPI-----PIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~i~~~D  194 (265)
                       .+|...+.+.+       ..+++++++|||.+++|.....     +......  ...     ..+........+++++|
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence             77777775542       3579999999999998752111     1110000  000     00111223357999999


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +|++++.++....  ..++.|++.++.
T Consensus       229 ~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        229 IADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             HHHHHHHHcCccccCccCCeEEeCCCE
Confidence            9999999887643  347889888763

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.76  E-value=1.8e-17  Score=131.30  Aligned_cols=196  Identities=17%  Similarity=0.148  Sum_probs=130.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.+.....     ..+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826         12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-----ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421111     111111245889999999999988887632     6899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +..++++++    .  +.++||++||...++.          +..+...|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~~~y  156 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGLAHY  156 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCccHH
Confidence            9999976321                    122344442    2  5678999999876411          11122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|..++.+++       ..+++++++||+.++||.........+........++         ..+++++|+++++..
T Consensus       157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  227 (251)
T PRK12826        157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88888777663       3589999999999999853221111111111111111         157889999999999


Q ss_pred             HhcCcc--ccCceEEecCCCc
Q 024575          202 VLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++..+.  ..|++|+++++..
T Consensus       228 l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             HhCccccCcCCcEEEECCCcc
Confidence            886643  3588999988653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.75  E-value=2.1e-17  Score=131.30  Aligned_cols=199  Identities=18%  Similarity=0.217  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.... .+.    ..+.....++.++.+|+.|.+++..+++.     .++|+
T Consensus         7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAE-AAA----KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421 111    01111124688899999999977665542     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +    +..+++.++  +.+++|++||...+...           .....|
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-----------~~~~~y  150 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS-----------PFKSAY  150 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC-----------CCCchh
Confidence            9999986321                    1    112333334  66899999987654221           111234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCccc-------CCCCCCceeeeeeHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKD  194 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D  194 (265)
                       .+|...+.+++       ..+++++++||+.+++|...     ..+..........       ....+....++++++|
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE-----KQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH-----HHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence             77877776653       24899999999999987411     1111110000000       0112334567999999


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +|++++.++.++.  ..++.|++.++..
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcCccc
Confidence            9999999997642  3578899987654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.8e-17  Score=131.36  Aligned_cols=212  Identities=21%  Similarity=0.211  Sum_probs=140.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|++|+++++.|+++|++|++++|+.+......     ..+...  ..++.++.+|+.|++++.+++++.     .+
T Consensus        13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875         13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAA-----EEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421111     011111  146788999999999888777642     68


Q ss_pred             cEEEEcCCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           74 DVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        74 d~vi~~a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |++||+++...                     .+...++++    +.  +..+++++||...+..           ..+.
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~  156 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----------HRWF  156 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------CCCC
Confidence            99999998421                     012223333    21  3458999999876421           1123


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      +.| .+|...|.+++       ..+++++++|||.+.++....... ...........         ....+.+++|+++
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~  227 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT---------PLPRVGEVEDVAN  227 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC---------CCCCCcCHHHHHH
Confidence            334 89999998874       247999999999987764211000 01111111111         1123566999999


Q ss_pred             HHHHHhcCccc--cCceEEecCCCcc----CHHHHHHHHHHHhCCC
Q 024575          198 AFVQVLGNEKA--SRQVFNISGEKYV----TFDGLARACAKVTGLL  237 (265)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~~~----s~~el~~~i~~~~g~~  237 (265)
                      ++.+++..+..  .++.++++++..+    +..|+++.+.+..|..
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  273 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR  273 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence            99999987543  4789999998876    8888888887766654

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.4e-17  Score=129.53  Aligned_cols=204  Identities=19%  Similarity=0.256  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+.......+.    ..+.....++.++.+|+++++++.++++.     .++|+
T Consensus        12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVV----AEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            7999999999999999999999999997543111111    11111124578899999999988777653     26899


Q ss_pred             EEEcCCCC--------------ccchHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHH
Q 024575           76 VYDINGRE--------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTES  137 (265)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~  137 (265)
                      |||+++..              ..+..++++++.    ...++|++||........    .+..+ ....|..+|..+|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~~-~~~~Y~~sK~a~e~  162 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTMP-EYEPVARSKRAGED  162 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCCc-cccHHHHHHHHHHH
Confidence            99998752              123445666543    335899999854321000    01111 11123389999998


Q ss_pred             HHhh-------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          138 VLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       138 ~~~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      +++.       .++++++++|+.+-++.     ...+......+ ...  ........+++++|++++++.+++.+...|
T Consensus       163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~-----~~~~~~~~~~~-~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~g  234 (248)
T PRK07806        163 ALRALRPELAEKGIGFVVVSGDMIEGTV-----TATLLNRLNPG-AIE--ARREAAGKLYTVSEFAAEVARAVTAPVPSG  234 (248)
T ss_pred             HHHHHHHHhhccCeEEEEeCCccccCch-----hhhhhccCCHH-HHH--HHHhhhcccCCHHHHHHHHHHHhhccccCc
Confidence            8742       57899999998776652     11111000000 000  000011368899999999999999776678


Q ss_pred             ceEEecCCCcc
Q 024575          211 QVFNISGEKYV  221 (265)
Q Consensus       211 ~~~~i~~~~~~  221 (265)
                      +.|++++++..
T Consensus       235 ~~~~i~~~~~~  245 (248)
T PRK07806        235 HIEYVGGADYF  245 (248)
T ss_pred             cEEEecCccce
Confidence            89999998753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.74  E-value=8.7e-17  Score=115.27  Aligned_cols=191  Identities=21%  Similarity=0.279  Sum_probs=139.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||||.+|+.+++.+.++||+|++++|++++...             ..++.+++.|+.|.+++.+.+.  +.|+||..-
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-------------~~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~   70 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-------------RQGVTILQKDIFDLTSLASDLA--GHDAVISAF   70 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-------------cccceeecccccChhhhHhhhc--CCceEEEec
Confidence            4899999999999999999999999999888321             1578899999999999999999  999999886


Q ss_pred             CCCccc--------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH--HH-hhcCCce
Q 024575           81 GREADE--------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES--VL-ESKGVNW  146 (265)
Q Consensus        81 ~~~~~~--------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~--~~-~~~~~~~  146 (265)
                      +.....        ...+++.++  ++.|++.++..+..--..+ ..-.+.+..|..|+ .++..+|.  .| ++.+++|
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W  149 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW  149 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence            664222        334777777  7899999887665432111 22234556666676 66666663  34 3456999


Q ss_pred             eEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEec
Q 024575          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (265)
Q Consensus       147 ~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (265)
                      +.+-|+.++-|+...+-.       +-++.....+  ..--+.|+..|.|-+++..++++....++|.+.
T Consensus       150 TfvSPaa~f~PGerTg~y-------rlggD~ll~n--~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         150 TFVSPAAFFEPGERTGNY-------RLGGDQLLVN--AKGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             EEeCcHHhcCCccccCce-------EeccceEEEc--CCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            999999999997533311       1122211111  122488999999999999999998878888764

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6.4e-18  Score=135.72  Aligned_cols=210  Identities=19%  Similarity=0.187  Sum_probs=138.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++..... +.       ......+.++++|+++++++.++++.     ..+|+
T Consensus         9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          9 TGASRGFGRAWTEAALERGDRVVATARDTATLAD-LA-------EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH-------HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211 10       11124678889999999988777663     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||++|....                    +    ++.++..++  +.+++|++||...+....           ....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y  149 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------MSGIY  149 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------CccHH
Confidence            9999986321                    1    223333333  567999999977653211           12234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-----hHHHHHHHHcCCcccCCCCCCceeee-eeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQL-GHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~  195 (265)
                       .+|...+.+.+       ..+++++++|||.+..+......     ...+ ..... . +   ........+ ++.+|+
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~-~~~~~-~-~---~~~~~~~~~~~~p~dv  223 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAY-DTLRE-E-L---AEQWSERSVDGDPEAA  223 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhh-hhHHH-H-H---HHHHHhccCCCCHHHH
Confidence             88888777652       36899999999988765421110     0000 00000 0 0   000011234 779999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      +++++.+++.+...++.++.++++.+++.++.+.+.+..+
T Consensus       224 a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (275)
T PRK08263        224 AEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE  263 (275)
T ss_pred             HHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence            9999999998776666665556678899999988888643

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1e-16  Score=126.97  Aligned_cols=194  Identities=18%  Similarity=0.213  Sum_probs=129.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++..... +.    ..+.....++.++.+|+++.+++.++++..     .+|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774         12 TGAAGGIGQAYAEALAREGASVVVADINAEGAER-VA----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211 10    011111235678899999998887766532     6899


Q ss_pred             EEEcCCCCc-----------------------cchHHHHHhCC------CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREA-----------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~-----------------------~~~~~l~~~~~------~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |||++|...                       .+..++++++.      +.+++|++||...|.              +.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------~~  152 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------------YS  152 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------------Cc
Confidence            999999631                       11223333322      457999999987652              12


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      +.| .+|..+|.+++       ..++++++++||.+..+.........+.....+..+...         +.+++|++++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~  223 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR---------MGTPEDLVGM  223 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC---------CcCHHHHHHH
Confidence            344 89998888763       247899999999988775332222223333333322211         3458999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCccC
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++.++....  ..++.|++.+++.++
T Consensus       224 ~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        224 CLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHHHhChhhhCcCCCEEEECCCeecc
Confidence            999887642  367899999887553

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.2e-16  Score=127.06  Aligned_cols=205  Identities=14%  Similarity=0.113  Sum_probs=138.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|++........     .+  ...++.++.+|+.+.+++..++..     .++|+
T Consensus         8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD-----AL--GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655211110     00  024688899999999988877763     15899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +..++++++    .  +..++|++||...+...           ....|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~y~  149 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----------GHPAYS  149 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----------CCcccH
Confidence            9999986321                    112233332    2  45789999986542110           011234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc--hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|...+.+++       ..+++++.++||.++++.....  ....+......         .....++++++|++++++
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~  220 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAVL  220 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHH
Confidence            88888887763       2479999999999988742110  01111111111         112347899999999999


Q ss_pred             HHhcCc--cccCceEEecCCCccCHHHHHHHHHH
Q 024575          201 QVLGNE--KASRQVFNISGEKYVTFDGLARACAK  232 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~s~~el~~~i~~  232 (265)
                      .++...  ...|+.+++.++......|+.+.+..
T Consensus       221 ~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        221 FLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            999653  33578889999999999999987754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.4e-17  Score=128.11  Aligned_cols=185  Identities=18%  Similarity=0.240  Sum_probs=127.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.+..+...+     +.  ..+.+++.+|+.|.+++.++++.     .++|+
T Consensus        13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-----~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828         13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPG-----VP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH-----Hh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            79999999999999999999999999987553221110     00  24577889999999988877763     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++...                    .+..++++++    +  +.+++|++||...++..           .+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y  154 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGMGAY  154 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCcchh
Confidence            999988532                    1123344432    2  67899999998875321           122234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+++       ..+++++++|||.++++.....              .  +.  .....+++++|++++++.
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--------------~--~~--~~~~~~~~~~dva~~~~~  216 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--------------M--PD--ADFSRWVTPEQIAAVIAF  216 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--------------C--Cc--hhhhcCCCHHHHHHHHHH
Confidence             77877666652       3589999999999998731000              0  00  112237899999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++.+..  ..|+.+.+.+++..
T Consensus       217 ~l~~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        217 LLSDEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             HhCcccccccceEEEecCCEeC
Confidence            997653  35788888887643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.72  E-value=4.4e-16  Score=124.08  Aligned_cols=192  Identities=15%  Similarity=0.173  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.. . ..    ...+......+.++.+|+++.+++.++++.     .++|+
T Consensus        14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~-~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-H-EV----AAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-H-HH----HHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            7999999999999999999999999997422 1 10    011111124577899999998887776653     26899


Q ss_pred             EEEcCCCCcc-------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                         .++.++..++  +..++|++||...++.            ....|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~~Y  155 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------NRVPY  155 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------CCCcc
Confidence            9999974210                         0223444443  4568999999876531            11234


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCC------------CchhHHHHHHHHcCCcccCCCCCCceeee
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      ..+|...+.+.+       ..++++++++||++++|...            ......+........++.         -+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  226 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK---------RY  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc---------cC
Confidence            489998888763       24899999999999997310            001111222222222221         23


Q ss_pred             eeHHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .+++|++++++.++....  ..|+.+++.+++
T Consensus       227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        227 GTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            358999999999886542  357889998765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.71  E-value=2.1e-17  Score=131.43  Aligned_cols=201  Identities=17%  Similarity=0.229  Sum_probs=131.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|.++++.|+++|++|++++|+........        ......+.++.+|+++++++.+++..     ..+|+
T Consensus        12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067         12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAA--------LEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876522111        11124588899999999988877764     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhCC-------CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+++...                    ....++++++.       ...++|++||.....           +..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  152 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-----------GEALVSH  152 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-----------CCCCCch
Confidence            999998521                    12334444432       125799999864311           1112333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHH---cCCcccCCCCCCceeeeeeHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      | .+|...+.+.+       ..++++++++||.++++.... ... .+....   .+......+.......+.+++|+|+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-VDA-LFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-hhh-hhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            4 88988887753       368999999999999874211 000 000000   0000111122233457889999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +++.++..+.  ..|+.|++.+++.++
T Consensus       231 ~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        231 MALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHhCcccccccCcEEeecCCEeCC
Confidence            9999987643  357899999887653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=2.1e-16  Score=125.29  Aligned_cols=198  Identities=14%  Similarity=0.083  Sum_probs=126.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++..|+.........    .........+..+.+|+++++++..+++.     ..+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL----KMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999887765432111100    01111123567889999999888777653     26899


Q ss_pred             EEEcCCCCcc--------------------chHH----HHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEP----ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      |||++|....                    +..+    +++.++...+||++||...+.           +..+.+.| .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~  156 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------PAYGLSIYGA  156 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------CCCCchHHHH
Confidence            9999986211                    1122    223333446899999987652           22233445 8


Q ss_pred             chhhHHHHHh----h--cCCceeEeecceeeCCCCCC--chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          131 GKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       131 ~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      +|...|.+++    +  .++++.+++||.+.++....  ............  ..      .....+++++|+|++++.+
T Consensus       157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--KF------TLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--hc------CcCCCCCCHHHHHHHHHHH
Confidence            8988887763    2  37899999999987763110  000000000000  01      1123679999999999999


Q ss_pred             hcCccccCceEEecCCCcc
Q 024575          203 LGNEKASRQVFNISGEKYV  221 (265)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~  221 (265)
                      +..+...++.|++.++..+
T Consensus       229 ~~~~~~~g~~~~i~~g~~~  247 (252)
T PRK06077        229 LKIESITGQVFVLDSGESL  247 (252)
T ss_pred             hCccccCCCeEEecCCeec
Confidence            9876666889999987643

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.4e-16  Score=128.40  Aligned_cols=201  Identities=14%  Similarity=0.129  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|++|++++|+++........   ........++.++.+|++|++++.+ +.+     ..+|+
T Consensus         9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~   84 (280)
T PRK06914          9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ---ATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL   84 (280)
T ss_pred             ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH---HHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence            79999999999999999999999999987552111100   0000012468899999999988776 432     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +..+++++    ++  +..++|++||...+..           ..+...|
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  153 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-----------FPGLSPY  153 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-----------CCCCchh
Confidence            9999986321                    12223333    44  5678999998654211           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch------------hHHHHHHHHcCCcccCCCCCCceeee
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------------EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                       .+|...+.+++       ..+++++++|||.++++......            ...........  +   .  .....+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~--~~~~~~  226 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I---N--SGSDTF  226 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H---h--hhhhcc
Confidence             88888887653       35899999999998887311000            00011111000  0   0  012356


Q ss_pred             eeHHHHHHHHHHHhcCccccCceEEecCCCccCHH
Q 024575          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (265)
                      ++++|+|++++.+++++... ..|+++++..+++.
T Consensus       227 ~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~  260 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL  260 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence            78999999999999987653 57888876666554

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.70  E-value=2.1e-16  Score=116.99  Aligned_cols=152  Identities=18%  Similarity=0.135  Sum_probs=113.0

Q ss_pred             chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c--chhhHHHHHhhcCCceeEeecceeeCCC
Q 024575           86 EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K--GKLNTESVLESKGVNWTSLRPVYIYGPL  158 (265)
Q Consensus        86 ~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~--~k~~~E~~~~~~~~~~~i~r~~~i~g~~  158 (265)
                      .+..+.+++.    ..+.+|.+|..++|-++....++|++.....++. +  .+++.-........+.+++|.|.+.|.+
T Consensus       107 ~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~g  186 (315)
T KOG3019|consen  107 VTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKG  186 (315)
T ss_pred             HHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecC
Confidence            3566777765    4568999999999988777777887776655554 2  2333333333456899999999999986


Q ss_pred             CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ...--..+...++-.+.++   |++.++++|||++|++..+..+++++.-.| ..|-+.+++++..|+.+.+.++++++.
T Consensus       187 GGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~~~v~G-ViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  187 GGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALENPSVKG-VINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             CcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhcCCCCc-eecccCCCccchHHHHHHHHHHhCCCc
Confidence            3221112222233345555   899999999999999999999999987655 899999999999999999999999987


Q ss_pred             ccc
Q 024575          239 FRS  241 (265)
Q Consensus       239 ~~~  241 (265)
                      +.+
T Consensus       263 ~~p  265 (315)
T KOG3019|consen  263 WLP  265 (315)
T ss_pred             ccC
Confidence            433

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.70  E-value=3.7e-16  Score=123.37  Aligned_cols=194  Identities=18%  Similarity=0.220  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|++.+.....     ..+.....++.++.+|+.|++++.++++.     ..+|+
T Consensus        11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653         11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521111     11111124688899999999988877763     25799


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    ...++++++    +  +.+++|++||.....           ...+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~~~~y  154 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPGQTNY  154 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCCCcHh
Confidence            9999976321                    123334443    3  567999999875421           11122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++++||+.++++.... +...........  +       ....+++.+|+++++..
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~~  224 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKE--I-------PLGRLGQPEEVANAVAF  224 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhc--C-------CCCCCcCHHHHHHHHHH
Confidence             77877666542       358999999999999985321 111111111111  1       11457889999999999


Q ss_pred             HhcCc--cccCceEEecCCCc
Q 024575          202 VLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (265)
                      ++...  ...++.|+++++..
T Consensus       225 ~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        225 LASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             HcCchhcCccCCEEEeCCCee
Confidence            98653  33578999998763

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.70  E-value=8.7e-17  Score=127.50  Aligned_cols=197  Identities=15%  Similarity=0.182  Sum_probs=126.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|+.+.......     .+. ...++.++.+|++|++++.++++.     .++|+
T Consensus        11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138         11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-----AIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-----HHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211110     000 124578999999999998887764     27899


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +.    ..++++++  +.++++++||......           ..+.+.|
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  153 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG-----------GRGRAAY  153 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC-----------CCCccHH
Confidence            9999986311                    11    23344444  5678999999755311           1112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCc-eeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+++       ..+++++++|||+++++.....     +........+........ ...+++.+|++++++
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  228 (252)
T PRK06138        154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI-----FARHADPEALREALRARHPMNRFGTAEEVAQAAL  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh-----hccccChHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             88888887763       2489999999999988742110     000000000000000011 123678999999999


Q ss_pred             HHhcCccc--cCceEEecCCC
Q 024575          201 QVLGNEKA--SRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~  219 (265)
                      .++.++..  .|+.+.+.++.
T Consensus       229 ~l~~~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        229 FLASDESSFATGTTLVVDGGW  249 (252)
T ss_pred             HHcCchhcCccCCEEEECCCe
Confidence            99877542  46777777653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1e-15  Score=121.61  Aligned_cols=197  Identities=18%  Similarity=0.264  Sum_probs=127.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+.........    ..+.....++.++.+|+++++++.++++.     ..+|+
T Consensus         8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQ----QELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987543211110    11111124688999999999888776653     26899


Q ss_pred             EEEcCCCCc----------------------cchHHHHHhC----C---C-----CCcEEEEecceeeecCCCCCCCCCC
Q 024575           76 VYDINGREA----------------------DEVEPILDAL----P---N-----LEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        76 vi~~a~~~~----------------------~~~~~l~~~~----~---~-----~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                      |||++|...                      .+..++++++    .   +     ..++|++||...+...         
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  154 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---------  154 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---------
Confidence            999998521                      1122333332    1   1     4679999997754211         


Q ss_pred             CCCccc-cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          122 TVDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       122 ~~~~~~-~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                        .+.+ |..+|...|.+++       ..++++++++||.+.++.... ....+....... ..+       ...+.+.+
T Consensus       155 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~-~~~-------~~~~~~~~  223 (256)
T PRK12745        155 --PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAKG-LVP-------MPRWGEPE  223 (256)
T ss_pred             --CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhhc-CCC-------cCCCcCHH
Confidence              1223 4488999887753       368999999999998874321 111121111111 111       12466899


Q ss_pred             HHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          194 DLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      |+++++..++....  ..|+.|++.++...
T Consensus       224 d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        224 DVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            99999998886542  35789999887543

>PRK06128 oxidoreductase; Provisional

Probab=99.69  E-value=1.8e-15  Score=122.96  Aligned_cols=198  Identities=20%  Similarity=0.262  Sum_probs=129.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||+++++.|+++|++|++..++..... ...    ...+.....++.++.+|+++.+++.++++.     .++|
T Consensus        61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEV----VQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH----HHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999998877543211 000    011111124678899999999888777653     2689


Q ss_pred             EEEEcCCCCc---------------------cchHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           75 VVYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      ++||++|...                     .+...++++    ++...++|++||...|....          ....|.
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  206 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----------TLLDYA  206 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------CchhHH
Confidence            9999998631                     112233343    33346899999988763211          112244


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|..++.+++       ..|+++++++||.+.+|.... ..............+         ...+...+|++.+++.
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~  277 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQPVEMAPLYVL  277 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcCHHHHHHHHHH
Confidence            88998888763       358999999999999985321 111122222211111         1234568999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++....  ..|+.+++.++..+
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeC
Confidence            886543  35789999988654

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5e-16  Score=123.31  Aligned_cols=194  Identities=19%  Similarity=0.258  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---------   70 (265)
                      |||+|++|++++++|+++|++|+++ .|+........     ..+......+.++.+|++|++++.++++.         
T Consensus        12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746         12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-----REIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            7999999999999999999999876 45543211100     01111124578899999999998877763         


Q ss_pred             --cCccEEEEcCCCCcc--------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           71 --KGFDVVYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                        .++|++||++|....                    +..+++++    ++...++|++||..++..           ..
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~-----------~~  155 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG-----------FT  155 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC-----------CC
Confidence              258999999986321                    12223333    233458999999877532           11


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      +...| .+|...+.+++       ..++++++++||.+++|..........+.......        .....+++++|++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva  227 (254)
T PRK12746        156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS--------SVFGRIGQVEDIA  227 (254)
T ss_pred             CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc--------CCcCCCCCHHHHH
Confidence            22334 88998887652       35799999999999887421110000011111111        1123466799999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +++..++.++.  ..|+.|++.++
T Consensus       228 ~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        228 DAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHcCcccCCcCCCEEEeCCC
Confidence            99998887643  25789999876

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=5.2e-16  Score=123.28  Aligned_cols=197  Identities=21%  Similarity=0.238  Sum_probs=129.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.+... +.    ..+.....++.++.+|++|++++.+++..     ..+|+
T Consensus        16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAA-AA----ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 11    11111123578899999999988887763     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    +..++++++    .  +..++|++||.....           +..+...|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y  159 (255)
T PRK07523         91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----------ARPGIAPY  159 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------CCCCCccH
Confidence            9999986321                    122333332    2  457899999865421           11123334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+++       ..+++++++|||.+.++...... ...+........+         ...+..++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACV  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88988887753       46899999999999887421111 0111112211111         123567899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCccC
Q 024575          201 QVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      .++....  ..|+.+++.++..+|
T Consensus       231 ~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        231 FLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHcCchhcCccCcEEEECCCeecc
Confidence            9987533  357889998876544

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.8e-16  Score=123.53  Aligned_cols=192  Identities=18%  Similarity=0.158  Sum_probs=124.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+...... ..    ..+......+.++.+|+++++++.++++.     ..+|+
T Consensus        16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEE-LV----DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987543211 10    11111124678889999999998877763     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    ++.+++++    +.  +..+||++||...+...           .+...|
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  159 (274)
T PRK07775         91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----------PHMGAY  159 (274)
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----------CCcchH
Confidence            9999986321                    12223333    22  44679999998765321           112234


Q ss_pred             -cchhhHHHHHhh-------cCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          130 -KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       130 -~~k~~~E~~~~~-------~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                       .+|...|.+++.       .+++++++|||.+.++...   ......++.....      ++ ......+++++|+|++
T Consensus       160 ~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a  232 (274)
T PRK07775        160 GAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFLRASDLARA  232 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-ccccccccCHHHHHHH
Confidence             899999887642       3899999999987654211   1111111111111      01 1123568999999999


Q ss_pred             HHHHhcCccccCceEEec
Q 024575          199 FVQVLGNEKASRQVFNIS  216 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~  216 (265)
                      ++.+++++. .+.+||+.
T Consensus       233 ~~~~~~~~~-~~~~~~~~  249 (274)
T PRK07775        233 ITFVAETPR-GAHVVNME  249 (274)
T ss_pred             HHHHhcCCC-CCCeeEEe
Confidence            999998764 35577775

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.68  E-value=2.7e-16  Score=125.18  Aligned_cols=203  Identities=14%  Similarity=0.115  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|+||+++++.|+++|++|++++|+...... ..    ..+...  ...+.++.+|+++.+++.+++.+     ..+
T Consensus         8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAAN-VA----QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999997654211 11    011111  13588999999999888777653     268


Q ss_pred             cEEEEcCCCCc--------------------cc----hHHHHHhCC--C-CCcEEEEeccee-eecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREA--------------------DE----VEPILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~--------------------~~----~~~l~~~~~--~-~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~  125 (265)
                      |+|||++|...                    .+    .+.+++.+.  + ..++|++||... ++.            ..
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------~~  150 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------KH  150 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------CC
Confidence            99999998531                    11    123333333  3 358999988642 211            11


Q ss_pred             cccc-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHH--cCCcccCCCCCCceeeeeeHHHH
Q 024575          126 KSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ...| .+|...+.++       ...+++++++|||.++++......+..+.....  ..+......+......+++++|+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  230 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDV  230 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHH
Confidence            2234 8888876664       246899999999998876433233222221110  00000011122234567889999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++++.++.+..  ..|+.|++.+++.
T Consensus       231 ~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        231 LNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHHHHcCcccccccCceEEEcCCEE
Confidence            999998886542  3578899998764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.68  E-value=3.6e-16  Score=129.68  Aligned_cols=233  Identities=15%  Similarity=0.170  Sum_probs=154.1

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCcccc--CCC----CCChhHH----hhhhccceEEEecCCCh------
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QLP----GESDQEF----AEFSSKILHLKGDRKDY------   61 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~--~~~----~~~~~~~----~~~~~~~~~~~~D~~~~------   61 (265)
                      ||||||+|+-+++.|++.-   .+++++.|.......  ++.    +..-..+    .+...++..+.||+.++      
T Consensus        18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~   97 (467)
T KOG1221|consen   18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE   97 (467)
T ss_pred             EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence            8999999999999999863   488999997765211  010    0000111    11236788999999864      


Q ss_pred             HHHHHHhhccCccEEEEcCCC-------------CccchHHHHHhCC---CCCcEEEEecceeeecC---CCCCCCCCC-
Q 024575           62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETD-  121 (265)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~---~~~~~~e~~-  121 (265)
                      .++..+..  .+|+|||+|+.             |..+++++++.|+   +.+-|+|+||..+.-..   ...++.+.. 
T Consensus        98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~  175 (467)
T KOG1221|consen   98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET  175 (467)
T ss_pred             HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence            44555555  99999999986             5667888888876   78899999998876211   111111111 


Q ss_pred             --------------------------CCCccccccchhhHHHHHhh--cCCceeEeecceeeCCCC--CCchhH------
Q 024575          122 --------------------------TVDPKSRHKGKLNTESVLES--KGVNWTSLRPVYIYGPLN--YNPVEE------  165 (265)
Q Consensus       122 --------------------------~~~~~~~~~~k~~~E~~~~~--~~~~~~i~r~~~i~g~~~--~~~~~~------  165 (265)
                                                .-.|.+|.-+|..+|.++.+  .+++.+|+||+.|.+...  ..+++.      
T Consensus       176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~  255 (467)
T KOG1221|consen  176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPD  255 (467)
T ss_pred             CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCc
Confidence                                      00255566899999999854  579999999999987531  111110      


Q ss_pred             HHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh-c---C-ccccCceEEecCC--CccCHHHHHHHHHHHhC
Q 024575          166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-G---N-EKASRQVFNISGE--KYVTFDGLARACAKVTG  235 (265)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~-~---~-~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g  235 (265)
                      .++...-+|..-.+..+.+...+.|.+|.++.+++.+. .   + +.+...+||++++  .++++.++.+...+...
T Consensus       256 g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  256 GVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             eEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence            11111122332233457778899999999999998665 1   1 1122459999975  55999999999888875

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9e-16  Score=123.40  Aligned_cols=194  Identities=16%  Similarity=0.149  Sum_probs=122.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.... .+..       ....++..+.+|++|++++.++++.     ..+|+
T Consensus        10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~l~~-------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180         10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-DFEA-------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-HHHh-------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521 1111       0124678899999999988877763     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||++|....                    ++.+++++    ++  +..++|++||...+..           ..+...|
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----------~~~~~~Y  150 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----------MPGIGYY  150 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----------CCCcchh
Confidence            9999987321                    12334444    33  4578999999775421           1123334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc------hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|..+|.+++       ..+++++++|||.+.++.....      ....+...............   ...+..++|+
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dv  227 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKS---GKQPGDPAKA  227 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhc---cCCCCCHHHH
Confidence             88988887653       2589999999999977642111      11111111000000000011   1234568999


Q ss_pred             HHHHHHHhcCccccCceEEecC
Q 024575          196 ARAFVQVLGNEKASRQVFNISG  217 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~  217 (265)
                      +++++.+++.+... ..|.++.
T Consensus       228 a~~~~~~l~~~~~~-~~~~~g~  248 (277)
T PRK06180        228 AQAILAAVESDEPP-LHLLLGS  248 (277)
T ss_pred             HHHHHHHHcCCCCC-eeEeccH
Confidence            99999999876543 3454443

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.9e-15  Score=119.53  Aligned_cols=195  Identities=16%  Similarity=0.215  Sum_probs=125.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|......+...+ ...........+.++.+|+.+.+++.++++.     .++|.
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   90 (249)
T PRK12827         12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADA-VAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI   90 (249)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999988754332111110 0011111124688999999999988877752     36899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC------C-CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~------~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||++|...                    .+..++++++      + +.+++|++||...+...           .+...
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  159 (249)
T PRK12827         91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-----------RGQVN  159 (249)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----------CCCch
Confidence            999998632                    1133344442      2 45789999997764321           12223


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+++       ..+++++++|||.+.++.....+..   .......+.         ..+.+.+|+++++.
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~  227 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVA  227 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHH
Confidence            4 88887776652       2489999999999999853322211   111111111         12346899999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++....  ..|+.+++.++.
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        228 FLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHcCcccCCccCcEEEeCCCC
Confidence            9886532  347788887754

>PRK09186 flagellin modification protein A; Provisional

Probab=99.67  E-value=2.3e-15  Score=119.66  Aligned_cols=199  Identities=15%  Similarity=0.114  Sum_probs=126.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh--hhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||+++++.|+++|++|+++.|++++......     .+..  ....+.++.+|++|++++.++++..     .+
T Consensus        10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186         10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE-----SLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHH-----HHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998655211100     0000  0134667799999999988877632     38


Q ss_pred             cEEEEcCCCCc-----------------------c----chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREA-----------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~-----------------------~----~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |+|||+++...                       .    .++.++++++  +..++|++||...+..... ...+..+..
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~  163 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMT  163 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccC
Confidence            99999996321                       0    1234455554  5679999999765432211 111222222


Q ss_pred             -ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 -PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 -~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                       +..|..+|...+.+.+       ..++++++++||.++++..     ..+........         ....+++.+|+|
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~---------~~~~~~~~~dva  229 (256)
T PRK09186        164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCC---------NGKGMLDPDDIC  229 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcC---------CccCCCCHHHhh
Confidence             2234488988887753       3579999999998876531     11222211111         012467899999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++.++.+..  ..|+.+.+.++.
T Consensus       230 ~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        230 GTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             hhHhheeccccccccCceEEecCCc
Confidence            99999997543  357777777653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.8e-16  Score=124.10  Aligned_cols=200  Identities=18%  Similarity=0.171  Sum_probs=124.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|+++... .+.+    ...  ..++.++.+|++|++++.++++.     .++|+
T Consensus        17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~-~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALA-ATAA----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999765421 1100    000  11468899999999988877753     27899


Q ss_pred             EEEcCCCC-cc--------------------chHHHHHh----CC--CC-CcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGRE-AD--------------------EVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~l~~~----~~--~~-~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |||+++.. ..                    +...++++    ++  +. ++++++||.....           ...+..
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~-----------~~~~~~  158 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL-----------GYPGRT  158 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc-----------CCCCCc
Confidence            99999865 11                    12223333    23  33 5688887754321           111122


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCC---CCCCceeeeeeHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP---GSGIQVTQLGHVKDLA  196 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D~a  196 (265)
                      .| .+|...|.+++       ..+++++++|||++++|.... ......... ........   ........+++++|++
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a  236 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR-VIEARAQQL-GIGLDEMEQEYLEKISLGRMVEPEDIA  236 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH-Hhhhhhhcc-CCChhHHHHHHHhcCCCCCCCCHHHHH
Confidence            34 88888887763       248999999999999985211 110000000 00000000   0000123589999999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCc
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      +++..++...  ...++.|+++++..
T Consensus       237 ~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        237 ATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHHHcCccccCccCcEEEeCCCcc
Confidence            9998888642  33578999988753

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.6e-15  Score=120.11  Aligned_cols=195  Identities=16%  Similarity=0.173  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++........     .+.. ..++.++.+|+.|++++..+++..     .+|+
T Consensus        11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231         11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999999755221110     0000 145789999999999998877632     6899


Q ss_pred             EEEcCCCCcc-------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+++....                         .+..+++.+.  +.++||++||...+...           .+...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  153 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR-----------PGLGW  153 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC-----------CCchH
Confidence            9999986311                         1233344443  56789999998765321           12233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh---HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      | .+|...+.+.+       ..+++++.++||.+.++.......   .........         ......+++++|+|+
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~  224 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA---------TIPLGRLGTPEDIAN  224 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc---------CCCCCCCcCHHHHHH
Confidence            4 78877776652       348999999999987664211100   011111111         111234678999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCcc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +++.++..+.  ..|+.+.+.++..+
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        225 AALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             HHHHHhCccccCCCCCeEEECCCccC
Confidence            9999986543  34677788776543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.67  E-value=1.6e-15  Score=121.71  Aligned_cols=193  Identities=17%  Similarity=0.139  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+.++.. .+.          ..++.++.+|++|.+++.++++.     .++|+
T Consensus         9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~-~~~----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          9 TGASSGIGKATARRLAAQGYTVYGAARRVDKME-DLA----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421 111          14688999999999988877763     27899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    +..++..++  +..++|++||...+..          ......|.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------~~~~~~Y~  147 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY----------TPLGAWYH  147 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC----------CCCccHhH
Confidence            9999986421                    1    334455554  5578999999653211          00111234


Q ss_pred             cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcc--------cCCCCCCceeeeeeHHH
Q 024575          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--------PIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~D  194 (265)
                      .+|...+.+.       +..++++++++||.+.++..... ...+... ......        ...........+.+.+|
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-ADHLLKT-SGNGAYAEQAQAVAASMRSTYGSGRLSDPSV  225 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-hhhhccc-ccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence            8898888764       24689999999999988742100 0000000 000000        00000111234668999


Q ss_pred             HHHHHHHHhcCccccCceEEecC
Q 024575          195 LARAFVQVLGNEKASRQVFNISG  217 (265)
Q Consensus       195 ~a~~~~~~~~~~~~~~~~~~i~~  217 (265)
                      +|++++.++..... ...|.++.
T Consensus       226 vA~~i~~~~~~~~~-~~~~~~g~  247 (273)
T PRK06182        226 IADAISKAVTARRP-KTRYAVGF  247 (273)
T ss_pred             HHHHHHHHHhCCCC-CceeecCc
Confidence            99999999986543 34666654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=3.1e-15  Score=118.48  Aligned_cols=195  Identities=16%  Similarity=0.163  Sum_probs=125.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|++|+++++.|+++|++|+++ .|+..... .+.    ..+.....++.++.+|++|++++.+++++.     .+|
T Consensus        10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063         10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE-ETA----EEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999998874 56544311 110    011111246888999999999888877642     689


Q ss_pred             EEEEcCCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~----~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|||++|....                    +...+++    ++.  +.++||++||...+.           +..+...
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  153 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------YLENYTT  153 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCCccH
Confidence            99999985321                    1222333    332  456999999976531           1112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|..+|.+++       ..++++++++||.+..+..... -...+........         ....+++.+|+++++
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~  224 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT---------PAGRMVEPEDVANAV  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC---------CCCCCcCHHHHHHHH
Confidence            4 89999998863       3689999999999877641100 0011111111110         112368899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +.++.++.  ..|+.+++.++..
T Consensus       225 ~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        225 LFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHcCchhcCccCCEEEECCCee
Confidence            99987653  3578888888754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.66  E-value=3.7e-15  Score=117.79  Aligned_cols=194  Identities=20%  Similarity=0.258  Sum_probs=124.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||||++|+++++.|+++|++|+++.|++........    ..+.....++.++.+|+++.+++.++++.     .++|+
T Consensus        11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557         11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987653211110    01111135678899999999988877663     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC----C--CCCcEEEEeccee-eecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~----~--~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+++...                    ....++++++    .  +.++||++||... ++..           ....|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~-----------~~~~y  155 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP-----------GQANY  155 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------CCchh
Confidence            999998632                    1122333332    2  4568999998643 2211           11223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+++       ..++++++++||.+.++.. ......+........+         ...+.+.+|+++++..
T Consensus       156 ~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~  225 (248)
T PRK05557        156 AASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMT-DALPEDVKEAILAQIP---------LGRLGQPEEIASAVAF  225 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccc-cccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence            378887776552       3589999999998765532 1112222222221111         1235678999999988


Q ss_pred             HhcC--ccccCceEEecCCC
Q 024575          202 VLGN--EKASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~--~~~~~~~~~i~~~~  219 (265)
                      ++..  ....++.|+++++.
T Consensus       226 l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        226 LASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HcCcccCCccccEEEecCCc
Confidence            8865  33467899998764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.66  E-value=2.4e-15  Score=119.26  Aligned_cols=194  Identities=15%  Similarity=0.080  Sum_probs=124.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|+...   ..           ...+.++++|+++.+++.++++.     ..+|+
T Consensus        14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---QE-----------DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecchhh---hc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998611   00           25688899999999988887763     24899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    ....++++    ++  +..++|++||.....           +..+...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y  148 (252)
T PRK08220         80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------PRIGMAAY  148 (252)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------CCCCCchh
Confidence            9999986321                    12223333    22  446899999876421           11223334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHH-HHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+++       ..++++++++||.++++.....+....... ...+. ............+++++|+|++++
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF-PEQFKLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH-HHHHhhcCCCcccCCHHHHHHHHH
Confidence             88988887762       368999999999999874211000000000 00000 000001112245788999999999


Q ss_pred             HHhcCc--cccCceEEecCCCc
Q 024575          201 QVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      .++...  ...++.+.+.++..
T Consensus       228 ~l~~~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        228 FLASDLASHITLQDIVVDGGAT  249 (252)
T ss_pred             HHhcchhcCccCcEEEECCCee
Confidence            988653  33567777777643

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.66  E-value=4.6e-15  Score=119.93  Aligned_cols=197  Identities=19%  Similarity=0.235  Sum_probs=128.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.+++++|+++|++|+++.|+.........    ..+.....++.++.+|+++.+.+.++++.     .++|+
T Consensus        52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK----QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997643211111    11111123578899999999988877763     26899


Q ss_pred             EEEcCCCCcc---------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCcccccc
Q 024575           76 VYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      +||+++....                     +..+++++    ++...++|++||...+.....          ...|..
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------~~~Y~~  197 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------LIDYSA  197 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------cchhHH
Confidence            9999986311                     12233333    233368999999887632211          112348


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+++       ..+++++.++||.++.+................         ......+.+.+|++++++.++
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHc
Confidence            8888877653       358999999999998874322111111111111         111234678999999999998


Q ss_pred             cCcc--ccCceEEecCCCc
Q 024575          204 GNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~  220 (265)
                      ....  ..|..+.+.++..
T Consensus       269 ~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        269 SPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             CcccCCccCcEEEeCCCcc
Confidence            7643  3578888887643

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=118.84  Aligned_cols=195  Identities=20%  Similarity=0.191  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|+.|++..++........    ...+......+.++.+|++|.+++.+++..     ..+|+
T Consensus         8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999887765433211111    011111124577899999999988877763     26899


Q ss_pred             EEEcCCCCcc---------------------chHHHHHhC----C-C----CCcEEEEecceee-ecCCCCCCCCCCCCC
Q 024575           76 VYDINGREAD---------------------EVEPILDAL----P-N----LEQFIYCSSAGVY-LKSDLLPHCETDTVD  124 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~~----~-~----~~~~v~~Ss~~~~-~~~~~~~~~e~~~~~  124 (265)
                      |||+++....                     +..++++++    . .    ..++|++||...+ +...          .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~  153 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG----------E  153 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC----------C
Confidence            9999986421                     112233332    1 1    2368999987542 2110          0


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...|..+|...|.+++       ..+++++++||+.+++|..................++..         +.+++|+++
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~d~a~  224 (248)
T PRK06123        154 YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR---------GGTAEEVAR  224 (248)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHH
Confidence            0124489999888763       248999999999999985322212222222222222211         235899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +++.++....  ..|+.|++.++
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        225 AILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHhCccccCccCCEEeecCC
Confidence            9999887542  45788998875

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.4e-14  Score=113.62  Aligned_cols=183  Identities=21%  Similarity=0.220  Sum_probs=122.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||+|++|++++++|+++|++|+++.|+....                ...+++.+|+++.+++.++++.    .++|++
T Consensus         9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            79999999999999999999999999987541                1225789999999887766652    368999


Q ss_pred             EEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccccc
Q 024575           77 YDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        77 i~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      ||+++....                    +    ...++.+++  +..++|++||...|+...           ...|..
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~Y~~  141 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD-----------RTSYSA  141 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC-----------chHHHH
Confidence            999986321                    1    222334444  567999999987653211           123448


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCc--hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      +|...|.+.+       ..+++++++|||.+..+.....  .............+         ...+...+|++++++.
T Consensus       142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~  212 (234)
T PRK07577        142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP---------MRRLGTPEEVAAAIAF  212 (234)
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence            8888887653       3589999999999887642110  00111111111111         1123467999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++..+.  ..|+.+.+.++.
T Consensus       213 l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        213 LLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HhCcccCCccceEEEecCCc
Confidence            987653  357788887664

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.65  E-value=8.4e-16  Score=119.90  Aligned_cols=182  Identities=16%  Similarity=0.158  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|++|+++++.|+++ ++|++++|++.+.. .+        .....+++++++|++|++++.++++.. ++|+|||+
T Consensus         9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~-~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLD-EL--------AAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH-HH--------HHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999 99999999865421 11        111246889999999999999888743 59999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhh
Q 024575           80 NGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (265)
                      ++.....                        ..+++++++ ..+++|++||...++...          ....|..+|..
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~----------~~~~y~~~K~a  148 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP----------GWGSYAASKFA  148 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC----------CCchHHHHHHH
Confidence            9863210                        334444444 567899999877653211          11223478888


Q ss_pred             HHHHHhh-----cC-CceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          135 TESVLES-----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       135 ~E~~~~~-----~~-~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      .+.+++.     .. +++..++||.+.++.     ...+...  .+..       .....+++++|++++++.+++++. 
T Consensus       149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~-----~~~~~~~--~~~~-------~~~~~~~~~~dva~~~~~~l~~~~-  213 (227)
T PRK08219        149 LRALADALREEEPGNVRVTSVHPGRTDTDM-----QRGLVAQ--EGGE-------YDPERYLRPETVAKAVRFAVDAPP-  213 (227)
T ss_pred             HHHHHHHHHHHhcCCceEEEEecCCccchH-----hhhhhhh--hccc-------cCCCCCCCHHHHHHHHHHHHcCCC-
Confidence            7776531     24 899999998766542     1111100  0111       112357899999999999998765 


Q ss_pred             cCceEEecC
Q 024575          209 SRQVFNISG  217 (265)
Q Consensus       209 ~~~~~~i~~  217 (265)
                      .+..+++..
T Consensus       214 ~~~~~~~~~  222 (227)
T PRK08219        214 DAHITEVVV  222 (227)
T ss_pred             CCccceEEE
Confidence            355777653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.65  E-value=3.6e-15  Score=117.89  Aligned_cols=194  Identities=18%  Similarity=0.195  Sum_probs=125.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.++.........    ..+.....++.++.+|+++++++.+++++     ..+|+
T Consensus        12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLV----NELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999877654332111110    11111124688899999999998888774     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +...+++++    .  ...++|++||...+..           ..+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  156 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG-----------GFGQTNY  156 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-----------CCCCcch
Confidence            9999987321                    122333332    1  3568999999654321           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++... .............         .....+.+++|++++++.
T Consensus       157 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~  226 (247)
T PRK12935        157 SAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA-EVPEEVRQKIVAK---------IPKKRFGQADEIAKGVVY  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh-hccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHH
Confidence             88988776652       34899999999998776311 1111111111111         122457899999999999


Q ss_pred             HhcCcc-ccCceEEecCCC
Q 024575          202 VLGNEK-ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~-~~~~~~~i~~~~  219 (265)
                      +++... ..|+.|++.++.
T Consensus       227 ~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        227 LCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HcCcccCccCCEEEeCCCc
Confidence            886542 467899998864

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.4e-15  Score=120.03  Aligned_cols=190  Identities=17%  Similarity=0.216  Sum_probs=126.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|++|+++++.|+++|++|++++|++++.. .+.        . ..+..++.+|+++.+.+.++++.. .+|+|||+
T Consensus        15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~--------~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060         15 TGASSGIGRACAVALAQRGARVVAAARNAAALD-RLA--------G-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999865421 111        0 135678899999999888887742 58999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC-----C--CCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           80 NGREAD--------------------EVEPILDALP-----N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~~~-----~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      ++....                    +..++++++.     .  ..+||++||...+....          ....|..+|
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~y~~sK  154 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------DHLAYCASK  154 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----------CCcHhHHHH
Confidence            986321                    1223333322     1  36899999977643211          112234899


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      ..+|.+++       ..+++++.+|||+++++.....+.. .........         .....+++++|+++++..++.
T Consensus       155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~  225 (245)
T PRK07060        155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDVAAPILFLLS  225 (245)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcC
Confidence            98888763       3479999999999998752211110 001111110         112357889999999999997


Q ss_pred             Ccc--ccCceEEecCCC
Q 024575          205 NEK--ASRQVFNISGEK  219 (265)
Q Consensus       205 ~~~--~~~~~~~i~~~~  219 (265)
                      .+.  ..|+.+++.++.
T Consensus       226 ~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        226 DAASMVSGVSLPVDGGY  242 (245)
T ss_pred             cccCCccCcEEeECCCc
Confidence            653  357888888764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.65  E-value=9.9e-15  Score=115.55  Aligned_cols=195  Identities=18%  Similarity=0.191  Sum_probs=125.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+...... +.    ..+.....++.++.+|+++.+++.+++..     ..+|+
T Consensus         9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEK-VA----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHH-HH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999988654211 10    11111134688999999999988877653     25899


Q ss_pred             EEEcCCCCcc--------------------chHHH----HHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l----~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    +..++    ++.++  +.+++|++||...+.....          ...|.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----------~~~Y~  153 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----------EAVYA  153 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----------CchHH
Confidence            9999985211                    12223    33333  5678999999877642211          11233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-----hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .+|...+.+++       ..++++++++||.++++.....     ....+........+         ...+...+|+|+
T Consensus       154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~  224 (250)
T TIGR03206       154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP---------LGRLGQPDDLPG  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC---------ccCCcCHHHHHH
Confidence            88877776653       2489999999999988731100     00011111111111         112445799999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++..++..+.  ..|+.+++.++.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       225 AILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHcCcccCCCcCcEEEeCCCc
Confidence            9999886543  357899998764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.2e-15  Score=116.88  Aligned_cols=195  Identities=17%  Similarity=0.197  Sum_probs=127.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|++|++++++|+++|++|++++|++........     .+. ...+++++.+|+++++++.++++.. .+|++||+
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR-----ALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998654211100     000 0246889999999999999988743 47999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHH
Q 024575           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (265)
                      ++....                    ...+++++..  +..++|++||...+..           ..+...| .+|..++
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----------SASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----------CCcchHHHHHHHHHH
Confidence            986321                    1223334322  5678999999876532           1122334 8899988


Q ss_pred             HHHhh-----cCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          137 SVLES-----KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       137 ~~~~~-----~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      .+.+.     .+++++.++||.+-.+...   ......+.......  .+.       ..+...+|++++++.++.++..
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~dva~~~~~l~~~~~~  216 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAER--LPA-------RRVGQPEDVANAILFLAANGFT  216 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhcCCCc
Confidence            87643     2478888999877554210   00000111111111  111       1234579999999999987656


Q ss_pred             cCceEEecCCCcc
Q 024575          209 SRQVFNISGEKYV  221 (265)
Q Consensus       209 ~~~~~~i~~~~~~  221 (265)
                      .|+.|++.++..+
T Consensus       217 ~G~~~~v~gg~~~  229 (230)
T PRK07041        217 TGSTVLVDGGHAI  229 (230)
T ss_pred             CCcEEEeCCCeec
Confidence            6889999887653

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.9e-15  Score=119.47  Aligned_cols=211  Identities=14%  Similarity=0.115  Sum_probs=129.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++.+|+.+...+..     ..+......+.++.+|++|.+++.+++...     .+|+
T Consensus        12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876         12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865421111     111111235788999999999988777632     5899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHh----C-C-C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDA----L-P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~----~-~-~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|...                    .+..+++++    + + + ..++|++||...+..           ..+...
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----------~~~~~~  155 (275)
T PRK05876         87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----------NAGLGA  155 (275)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----------CCCCch
Confidence            999998621                    122233333    2 2 2 468999999876521           122333


Q ss_pred             c-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|..++.+.       ...++++++++||.+.++...... ...............++......++++++|+|+.++
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hhcCccccccccccccccccccccCCCHHHHHHHHH
Confidence            4 8888644433       245899999999998876421110 000000000111112233334567899999999999


Q ss_pred             HHhcCccccCceEEecCCCccCHHHHHHHHHHHh
Q 024575          201 QVLGNEKASRQVFNISGEKYVTFDGLARACAKVT  234 (265)
Q Consensus       201 ~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~  234 (265)
                      ..+.++.    .+.+.+  .....++.+...+..
T Consensus       235 ~ai~~~~----~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        235 DAILANR----LYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             HHHHcCC----eEEecC--hhhHHHHHHHHHHHH
Confidence            9987643    444443  344455555444443

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.9e-15  Score=119.17  Aligned_cols=198  Identities=14%  Similarity=0.156  Sum_probs=124.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++... +.+.    ..+.....++.++.+|+++++++..+++.     .++|+
T Consensus        11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890         11 SGVGPGLGRTLAVRAARAGADVVLAARTAERL-DEVA----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            79999999999999999999999999986542 1111    11111124578999999999988776653     26899


Q ss_pred             EEEcCCCCcc---------------------chHHHHHhC----C-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                     +...+++++    . ...++|++||...+..           ..+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  154 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----------QPKYGAY  154 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----------CCCcchh
Confidence            9999986311                     122333332    2 3458999998765321           1122234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCC-----c-ccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-----P-IPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|...+.+++       ..++++++++||.+++|....     ++.......     . ............+.+++|+
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG-----YFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEV  229 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH-----HhhhcccccCCCHHHHHHHHhhcCCccccCCHHHH
Confidence             88988887764       247999999999999984211     111000000     0 0000000112246778999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCC
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++.++...  ...|+.+.+.++.
T Consensus       230 a~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        230 ASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            99999988743  2346667666654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.2e-14  Score=115.10  Aligned_cols=195  Identities=15%  Similarity=0.129  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|++|++++|++++.....     ..+.....++.++.+|+++++++.++++.     .++|+
T Consensus        13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939         13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA-----AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865422111     11111124688999999999998887753     36999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~  128 (265)
                      |||++|....                    +..++++++    .  +..++|++||...+...           .... |
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~y  156 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA-----------PKLGAY  156 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-----------CCcchH
Confidence            9999986321                    122333332    2  34589999996653211           1122 3


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+++       ..+++++.++||.+..+.........+........         ....+++++|++++++.
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~  227 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR---------ALERLQVPDDVAGAVLF  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC---------CCCCCCCHHHHHHHHHH
Confidence            388888887763       35799999999988776421110001222222111         12346789999999999


Q ss_pred             HhcCc--cccCceEEecCCCc
Q 024575          202 VLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (265)
                      ++..+  ...|+.+++.++..
T Consensus       228 l~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        228 LLSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             HhCccccCccCcEEEECCCcc
Confidence            98764  24688899888753

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1e-14  Score=115.17  Aligned_cols=194  Identities=21%  Similarity=0.281  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|++|+++.|+.......+.    ..+.....++.++.+|+++.+++.++++.     .++|+
T Consensus        11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937         11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELV----AEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988876543211111    11111234688999999999988887764     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||++|...                    .+..+++++    ++...++|++||...+.           +..+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~~~Y~~  155 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----------PLPGYGPYAA  155 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------CCCCCchhHH
Confidence            999998631                    112233333    22335899999866531           11122334 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+++       ..++++++++||.+-.+..................++.         -+.+.+|+++++..++
T Consensus       156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~l~  226 (245)
T PRK12937        156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE---------RLGTPEEIAAAVAFLA  226 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHc
Confidence            8998887763       24789999999987765321111112222222222211         2335799999999988


Q ss_pred             cCcc--ccCceEEecCC
Q 024575          204 GNEK--ASRQVFNISGE  218 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~  218 (265)
                      ..+.  ..|+.+++.++
T Consensus       227 ~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CccccCccccEEEeCCC
Confidence            6543  35778888764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.63  E-value=2.5e-14  Score=113.04  Aligned_cols=195  Identities=20%  Similarity=0.256  Sum_probs=120.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEE-cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|++|++++++|+++|++|+++. |++.. .....    ..+.....++.++.+|++|++++.++++.     .++|
T Consensus         7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHA-AQEVV----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHH----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999998754 44322 11110    11111123578899999999988887763     2579


Q ss_pred             EEEEcCCCCcc---------------------chHH----HHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           75 VVYDINGREAD---------------------EVEP----ILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        75 ~vi~~a~~~~~---------------------~~~~----l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +|||+++....                     +...    ++..+.     ...+||++||...+...         +..
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---------~~~  152 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---------PGE  152 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---------CCc
Confidence            99999986311                     0111    122211     23569999997653211         100


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...|..+|...+.+++       +.+++++++||+.+++|..................++.         -..+.+|+++
T Consensus       153 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~  223 (247)
T PRK09730        153 YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQ  223 (247)
T ss_pred             ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            1124488888887653       35899999999999998532211122222222222111         1236899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +++.++.++.  ..|+.+.+.++
T Consensus       224 ~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        224 AIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHhhcChhhcCccCcEEecCCC
Confidence            9999887542  35667777664

>PRK06194 hypothetical protein; Provisional

Probab=99.63  E-value=7.2e-15  Score=118.80  Aligned_cols=173  Identities=14%  Similarity=0.168  Sum_probs=107.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194         12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-----AELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421111     11111123577899999999998887763     15899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C------CCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~------~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                      |||+||....                    +..+++++    +.  .      ..++|++||...+...           
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  155 (287)
T PRK06194         87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----------  155 (287)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----------
Confidence            9999987321                    12222222    22  1      1589999998765321           


Q ss_pred             Cccccc-cchhhHHHHHhh---------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          124 DPKSRH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~~---------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                      .+.+.| .+|...+.+++.         .++++..+.||.+..+.          .....+++..+.+++.+.+++++++
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  225 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI----------WQSERNRPADLANTAPPTRSQLIAQ  225 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc----------ccccccCchhcccCccccchhhHHH
Confidence            122334 899998887631         23666677776654431          1111233344445555556665555


Q ss_pred             HHHHHH
Q 024575          194 DLARAF  199 (265)
Q Consensus       194 D~a~~~  199 (265)
                      |.+..+
T Consensus       226 ~~~~~~  231 (287)
T PRK06194        226 AMSQKA  231 (287)
T ss_pred             HHHHhh
Confidence            555443

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.63  E-value=6.2e-15  Score=118.53  Aligned_cols=136  Identities=15%  Similarity=0.235  Sum_probs=100.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||+|++|+++++.|.++|++|++++|+++... .+.          ..+++++.+|++|.+++.++++.      ..+|
T Consensus        10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993         10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALE----------AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            799999999999999999999999999866521 111          14688899999999888776653      2589


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||++|....                    +    +..+++.++  +..++|++||...+.           +..+...
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  147 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------PMKYRGA  147 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------CCCccch
Confidence            99999986321                    1    345666665  567999999975431           1112233


Q ss_pred             c-cchhhHHHHH-------hhcCCceeEeecceeeCCC
Q 024575          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL  158 (265)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~  158 (265)
                      | .+|..+|.+.       +..++++++++||.+-.+.
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence            4 8999998875       3468999999999887663

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4.9e-15  Score=117.90  Aligned_cols=193  Identities=18%  Similarity=0.187  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+++.. +..     ..+.....++.++.+|+++++++..++++     ..+|+
T Consensus        13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628         13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFA-----EELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999987652 110     11111234688999999999988877763     26899


Q ss_pred             EEEcCCCCcc-------------------chHHHHH----hCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD-------------------EVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~----~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      |||++|....                   ...++.+    .++ ...+++++||...+..           ..+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~  155 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----------QGGTSGYAA  155 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----------CCCCchhHH
Confidence            9999985321                   1112222    233 4468999998765321           1122344 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHH------HHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW------FFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      +|...+.+++       ..+++++.++||.++++.... +...      .......  .++.      ...++..+|+++
T Consensus       156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~dva~  226 (258)
T PRK08628        156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN-WIATFDDPEAKLAAITA--KIPL------GHRMTTAEEIAD  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH-HhhhccCHHHHHHHHHh--cCCc------cccCCCHHHHHH
Confidence            8998888764       357999999999999874111 0000      0000000  0110      114677899999


Q ss_pred             HHHHHhcCc--cccCceEEecCCC
Q 024575          198 AFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ++++++...  ...|+.+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        227 TAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHhChhhccccCceEEecCCc
Confidence            999998654  3356778887654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.7e-14  Score=112.99  Aligned_cols=190  Identities=17%  Similarity=0.200  Sum_probs=124.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|.++|++|++++|+....   .           ..++.++++|++|++++.++++.     ..+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         15 TGGTKGIGAATVARLLEAGARVVTTARSRPDD---L-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             ECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---c-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541   1           24678899999999887765542     26899


Q ss_pred             EEEcCCCCc----------------------cch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~----------------------~~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |||++|...                      .+.    +.++..++  +..++|++||...+...          ..+..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PESTT  150 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCcc
Confidence            999998421                      011    22333333  44689999997654210          11223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHH-----------HHHHHcC-CcccCCCCCCcee
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-----------FHRLKAG-RPIPIPGSGIQVT  187 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~  187 (265)
                      .| .+|..++.+++       ..++++++++||.+.++.... +...+           .....+. ...+       ..
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~  222 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIP-------LG  222 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH-HHHHHHhhcCCCHHHHHHHHHHHhccCc-------cC
Confidence            34 88998887753       358999999999998874211 00000           0000000 0011       11


Q ss_pred             eeeeHHHHHHHHHHHhcCc--cccCceEEecCCCccC
Q 024575          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      .+...+|++++++.++...  ...|+.+.+.++...+
T Consensus       223 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        223 RPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            2446899999999998653  3457889998876554

>PRK08324 short chain dehydrogenase; Validated

Probab=99.62  E-value=4e-15  Score=133.28  Aligned_cols=203  Identities=14%  Similarity=0.118  Sum_probs=131.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.........     .+.. ..++.++.+|+++++++.++++..     ++|+
T Consensus       428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGG-PDRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998755211100     0000 137889999999999888777532     6899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||++|....                    +...++++    ++  + ..+||++||...+...           .....
T Consensus       502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----------~~~~~  570 (681)
T PRK08324        502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----------PNFGA  570 (681)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------CCcHH
Confidence            9999995321                    12334333    33  3 3689999997654211           11223


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceee-CCCCCCchhHHHHHHHHcCCcc----cCCCCCCceeeeeeHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI----PIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~D~  195 (265)
                      | .+|...+.+++       ..++++++++|+.+| +.+........ ......+...    ..+..+.....+++.+|+
T Consensus       571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~Dv  649 (681)
T PRK08324        571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE-ARAAAYGLSEEELEEFYRARNLLKREVTPEDV  649 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh-hhhhhccCChHHHHHHHHhcCCcCCccCHHHH
Confidence            4 89999888764       246999999999998 54321111100 0000111110    012233445678999999


Q ss_pred             HHHHHHHhc--CccccCceEEecCCCcc
Q 024575          196 ARAFVQVLG--NEKASRQVFNISGEKYV  221 (265)
Q Consensus       196 a~~~~~~~~--~~~~~~~~~~i~~~~~~  221 (265)
                      |++++.++.  .....|..+++.++...
T Consensus       650 A~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        650 AEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCchh
Confidence            999999884  34456789999987653

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7e-15  Score=117.34  Aligned_cols=181  Identities=20%  Similarity=0.260  Sum_probs=119.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|++|+++++.|++.|++|++++|++.+.....     ..+.....++.++.+|++|.+++.+++...     ++|+
T Consensus         7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     111111346888999999999888777642     6899


Q ss_pred             EEEcCCCCcc---------------------chHHHHHhC----C-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                     +..++++++    . +..++|++||...+..           ..+...|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  150 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-----------VPTRSGY  150 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----------CCCccHH
Confidence            9999986321                     122333332    2 4578999998776532           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+++       ..++++++++||.+..+.....     ..  ..+....  ..+.....+++++|++++++.
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-----~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~  221 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA-----LD--GDGKPLG--KSPMQESKIMSAEECAEAILP  221 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh-----cc--ccccccc--cccccccCCCCHHHHHHHHHH
Confidence             88988887753       3589999999999877632110     00  0111111  112223478999999999999


Q ss_pred             HhcCc
Q 024575          202 VLGNE  206 (265)
Q Consensus       202 ~~~~~  206 (265)
                      +++..
T Consensus       222 ~~~~~  226 (263)
T PRK06181        222 AIARR  226 (263)
T ss_pred             HhhCC
Confidence            99864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.62  E-value=1.7e-14  Score=113.35  Aligned_cols=193  Identities=20%  Similarity=0.257  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      ||++|++|++++++|+++|++|++++|+.......+.    ..+......+.++.+|++|++++.++++.     ..+|+
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV----EELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999997633111111    11111123578899999999988887763     25799


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhCC------CCCcEEEEeccee-eecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~~------~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+++....                    ...++++++.      +.++|+++||... ++..           ....|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----------~~~~y  148 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----------GQANY  148 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------CCchh
Confidence            9999986421                    1223444332      4568999999654 3321           11223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+++       ..++++++++|+.+.++.. ......+........+.         .-+.+++|++++++.
T Consensus       149 ~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  218 (239)
T TIGR01830       149 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT-DKLSEKVKKKILSQIPL---------GRFGTPEEVANAVAF  218 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhh-hhcChHHHHHHHhcCCc---------CCCcCHHHHHHHHHH
Confidence            377877766542       3589999999998766531 11111222222221111         124468999999998


Q ss_pred             HhcCc--cccCceEEecCC
Q 024575          202 VLGNE--KASRQVFNISGE  218 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~  218 (265)
                      ++..+  ...+++|++.++
T Consensus       219 ~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       219 LASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HhCcccCCcCCCEEEeCCC
Confidence            88543  346789998765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.4e-14  Score=112.18  Aligned_cols=198  Identities=13%  Similarity=0.169  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|++.|++|++++|+.+.....+.    ..+.....++..+.+|++|++++.++++.     ..+|+
T Consensus        14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETA----EHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997643211111    11111124678899999999988877663     25799


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +.    +.++..+.  +..++|++||...+.....        .....|.
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~~~Y~  161 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--------LLQAHYN  161 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------CCcchHH
Confidence            9999986311                    12    22333333  4568999998764321100        0012233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..++++++++||.+.++..................++         .-+...+|+++.++.+
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~l  232 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAKVDEMVGPAVFL  232 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            88888777653       3589999999999988742211111111111111111         1234589999999998


Q ss_pred             hcCc--cccCceEEecCCC
Q 024575          203 LGNE--KASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (265)
                      +.+.  ...|+.+.+.++.
T Consensus       233 ~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        233 LSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             cCccccCcCCceEEECcCE
Confidence            8653  2357788777753

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.61  E-value=2.3e-14  Score=113.08  Aligned_cols=196  Identities=18%  Similarity=0.248  Sum_probs=126.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|.++|++|+++.|++......+.    ........++.++.+|+.+.+++.++++.     ..+|+
T Consensus         8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998542111100    00011124588999999999988877753     25899


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    +.    +.+++.++  +..+||++||...+....           ....|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~Y  152 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF-----------GQTNY  152 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-----------CChHH
Confidence            9999986321                    11    22344444  567999999977652211           12234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+++       ..++++++++|+.+.++.... .............++         ..+...+|+++++..
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~  222 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQIPM---------KRLGTPEEIAAAVAF  222 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-cCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             88887776542       457999999999988774211 111111122221111         224458999999988


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++....  ..|+.+++.++..+
T Consensus       223 l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        223 LVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HcCccccCccCcEEEECCCeec
Confidence            886532  36889999987643

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.61  E-value=4.4e-15  Score=117.50  Aligned_cols=178  Identities=16%  Similarity=0.132  Sum_probs=116.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|.++++.|+++|++|++++|++++... +.       .....++.++.+|+++.+++.++++.     .++|+
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~-------~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LK-------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH-------HHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211 10       01124688899999999988776653     26999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                     +    +..++.+++  +..++|++||...+.           +..+...
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~  146 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGGNV  146 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCCCch
Confidence            9999986310                     1    233444444  567899999976431           1122334


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.+       ..++++++++||.+.++.... .+... ....  .   ..+ .   ...++..+|+|+++
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~-~~~~--~---~~~-~---~~~~~~~~dvA~~~  216 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKA--E---KTY-Q---NTVALTPEDVSEAV  216 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCc-HHHH--H---hhc-c---ccCCCCHHHHHHHH
Confidence            4 88988887752       357999999999987653110 00000 0000  0   000 0   11346799999999


Q ss_pred             HHHhcCcc
Q 024575          200 VQVLGNEK  207 (265)
Q Consensus       200 ~~~~~~~~  207 (265)
                      +.++..+.
T Consensus       217 ~~l~~~~~  224 (248)
T PRK10538        217 WWVATLPA  224 (248)
T ss_pred             HHHhcCCC
Confidence            99987654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=2.5e-14  Score=113.65  Aligned_cols=191  Identities=17%  Similarity=0.196  Sum_probs=124.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||++++++|+++|++|+++.|+.......+.          ..++.++.+|++|++++.++++.     .++|+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463         13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----------EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----------hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988776543221111          13578899999999988877763     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    ++.++..++  +..++|++||...++..          ......|
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y  152 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----------AEGTTFY  152 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----------CCCccHh
Confidence            9999986311                    1    233444444  45789999998765311          1112334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch----hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                       .+|...+.+.+       ..+++++.++||.+-.+......    ...+........+         ...+...+|+++
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~  223 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTGKPEDIAN  223 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCcCHHHHHH
Confidence             88988887763       35899999999988655311000    0011111111111         123456899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++.++....  ..|+.+.+.++..
T Consensus       224 ~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        224 IVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCee
Confidence            9999987543  3578888887653

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.60  E-value=2.8e-14  Score=113.60  Aligned_cols=196  Identities=17%  Similarity=0.181  Sum_probs=124.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.......+.    ..+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998876433111111    11111124688899999999988877753     25899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc-c-c
Q 024575           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-K-S  127 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~-~  127 (265)
                      |||++|...                    .+...++++    +.  ...++|+++|...+.            ..| . .
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~------------~~p~~~~  158 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN------------LNPDFLS  158 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC------------CCCCchH
Confidence            999998621                    112233333    22  235778887754431            111 1 2


Q ss_pred             cccchhhHHHHHhh------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          128 RHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       128 ~~~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      |..+|..+|.+.+.      .+++++.++||.+..+...  ....+. ........   +      ...+++|+|++++.
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~--~~~~~~-~~~~~~~~---~------~~~~~~d~a~~~~~  226 (258)
T PRK09134        159 YTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ--SPEDFA-RQHAATPL---G------RGSTPEEIAAAVRY  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc--ChHHHH-HHHhcCCC---C------CCcCHHHHHHHHHH
Confidence            34899888876532      2489999999988764311  111111 11111111   1      23568999999999


Q ss_pred             HhcCccccCceEEecCCCccCHH
Q 024575          202 VLGNEKASRQVFNISGEKYVTFD  224 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~  224 (265)
                      +++++...++.|.+.++..+++.
T Consensus       227 ~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        227 LLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HhcCCCcCCCEEEECCCeecccc
Confidence            99887667889999887765543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.60  E-value=2.1e-14  Score=114.00  Aligned_cols=193  Identities=15%  Similarity=0.150  Sum_probs=124.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.... ....     ..  ....+.++.+|+++++++.+++...     .+|+
T Consensus        21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~-----~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         21 TGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAA-----QL--LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHH-----Hh--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999999976431 1000     00  0135678999999999888776532     6899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +..+++++    ++  +..++|++||.......          .....|.
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~  162 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL----------ERHVAYC  162 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC----------CCCchHH
Confidence            9999986321                    12233333    22  45789999987642110          0112233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..+++++.++||.+..+.....+...........  .       ....+.+.+|++++++.+
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~va~~~~~l  233 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL--I-------PAGRFAYPEEIAAAALFL  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc--C-------CCCCCcCHHHHHHHHHHH
Confidence            88888777652       3589999999999877642111111111111111  1       112467899999999999


Q ss_pred             hcCcc--ccCceEEecCCCc
Q 024575          203 LGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~  220 (265)
                      +..+.  ..|+.+.+.++..
T Consensus       234 ~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        234 ASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             cCccccCccCCEEEECCCcc
Confidence            87643  3578888887754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8.8e-15  Score=117.43  Aligned_cols=199  Identities=18%  Similarity=0.128  Sum_probs=126.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||||.||+++++.|+++|++|++++|+++.......        . ...+.++.+|++|++++.++++.     .++|+
T Consensus        11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825         11 TGGARGIGLATARALAALGARVAIGDLDEALAKETAA--------E-LGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------H-hccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997655211110        0 12578899999999987766653     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-c
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~  128 (265)
                      +||++|....                    +    ++.++..+.  +..++|++||...+..           ..... |
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  150 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-----------VPGMATY  150 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-----------CCCCcch
Confidence            9999986321                    1    122334433  5678999999765421           11122 3


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+.       +..++++++++||.+..+...             +..      ......+++.+|+|+.++.
T Consensus       151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~------~~~~~~~~~~~~va~~~~~  211 (273)
T PRK07825        151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG------GAKGFKNVEPEDVAAAIVG  211 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc------cccCCCCCCHHHHHHHHHH
Confidence            37887666543       346899999999987554210             000      0112346789999999999


Q ss_pred             HhcCccccCceEEecC----CCccCHHHHHHHHHHHhCCCc
Q 024575          202 VLGNEKASRQVFNISG----EKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~----~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++.++...........    -..+....+.+.+.+.++.+.
T Consensus       212 ~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  252 (273)
T PRK07825        212 TVAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDR  252 (273)
T ss_pred             HHhCCCCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccc
Confidence            9987653110011110    012333566677777777654

>PRK05717 oxidoreductase; Validated

Probab=99.60  E-value=1.6e-14  Score=114.71  Aligned_cols=192  Identities=16%  Similarity=0.135  Sum_probs=122.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+..+.....        ......+.++.+|+++.+++.+++++     ..+|+
T Consensus        16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA--------KALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999988765421110        11124678899999999887665543     15899


Q ss_pred             EEEcCCCCcc----------------------chHHHHHhC----C-CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD----------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                      +..++++++    . ...++|++||...+...          .....|
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~----------~~~~~Y  157 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE----------PDTEAY  157 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC----------CCCcch
Confidence            9999986321                      133444443    2 34679999987653211          111224


Q ss_pred             ccchhhHHHHHh----h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       129 ~~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      ..+|..++.+.+    +  .+++++.++||.+.++.............. ... .+       ...+.+.+|++.++..+
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~-~~~-~~-------~~~~~~~~~va~~~~~l  228 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEAD-HAQ-HP-------AGRVGTVEDVAAMVAWL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHH-hhc-CC-------CCCCcCHHHHHHHHHHH
Confidence            489999888764    2  358999999999988742211111111110 110 11       11356789999999988


Q ss_pred             hcCcc--ccCceEEecCCC
Q 024575          203 LGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (265)
                      +....  ..|+.+.+.++.
T Consensus       229 ~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        229 LSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             cCchhcCccCcEEEECCCc
Confidence            86532  357778887654

>PRK06398 aldose dehydrogenase; Validated

Probab=99.60  E-value=1e-13  Score=110.24  Aligned_cols=186  Identities=15%  Similarity=0.147  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|++.|++|++++|+...                ...+.++++|++|++++.++++.     ..+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398         12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                13677899999999888777753     26899


Q ss_pred             EEEcCCCCcc--------------------chHHH----HHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l----~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +...+    +..++  +..++|++||...+..           ..+...|
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  144 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----------TRNAAAY  144 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----------CCCCchh
Confidence            9999986311                    12223    33332  4578999999776421           1122334


Q ss_pred             -cchhhHHHHHhh------cCCceeEeecceeeCCCCCCch------hHH-HHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV------EEW-FFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|...+.+.+.      .+++++.++||.+..+......      ... .......      +........+...+|+
T Consensus       145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~ev  218 (258)
T PRK06398        145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEV  218 (258)
T ss_pred             hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHH
Confidence             889998887642      2489999999988665210000      000 0000000      0011111235678999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCC
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ++++++++...  ...|+.+.+.++.
T Consensus       219 a~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        219 AYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHHcCcccCCCCCcEEEECCcc
Confidence            99999988653  2357778787764

>PRK07985 oxidoreductase; Provisional

Probab=99.60  E-value=3.5e-14  Score=115.05  Aligned_cols=196  Identities=21%  Similarity=0.254  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||++++++|+++|++|++..|+.... .+.+.    ........++.++.+|+++.+++.++++.     .++|
T Consensus        55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVK----KIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999887654321 11110    11111124577899999999888766653     2589


Q ss_pred             EEEEcCCCCc---------------------cchHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           75 VVYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      ++||++|...                     .+...++++    ++...++|++||...+....          ....|.
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------~~~~Y~  200 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------HLLDYA  200 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC----------CcchhH
Confidence            9999998521                     012233333    23336899999987653211          112244


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+.+       ..++++++++||+++++.... ..............++         ..+...+|+|++++.
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~r~~~pedva~~~~f  271 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM---------KRAGQPAELAPVYVY  271 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC---------CCCCCHHHHHHHHHh
Confidence            88988887753       358999999999999885211 1111111111111111         124458999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++....  ..|+.+.+.++.
T Consensus       272 L~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             hhChhcCCccccEEeeCCCe
Confidence            986543  357788888764

>PRK06196 oxidoreductase; Provisional

Probab=99.60  E-value=2.6e-14  Score=116.98  Aligned_cols=188  Identities=20%  Similarity=0.135  Sum_probs=117.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.+......        + ..++.++.+|++|.+++.+++..     .++|+
T Consensus        32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~--------~-l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA--------G-IDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------H-hhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            7999999999999999999999999998654211111        1 13478999999999988777653     36899


Q ss_pred             EEEcCCCCcc------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCC---CCCCCcccc
Q 024575           76 VYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---TDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e---~~~~~~~~~  128 (265)
                      +||+||....                  +    ++.++..++  +..++|++||.......  ....+   ..+..+...
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--~~~~~~~~~~~~~~~~~  180 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--IRWDDPHFTRGYDKWLA  180 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--CCccccCccCCCChHHH
Confidence            9999985311                  1    233444444  44799999997543211  11111   112222333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHH--HHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF--HRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+       ..++++++++||++.++...........  ....... .++ .     ..+...+|+|..
T Consensus       181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~a~~  253 (315)
T PRK06196        181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPAQGAAT  253 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHhHHHHH
Confidence            5 89998887652       3589999999999998852111000000  0000000 000 0     023467999999


Q ss_pred             HHHHhcCc
Q 024575          199 FVQVLGNE  206 (265)
Q Consensus       199 ~~~~~~~~  206 (265)
                      +++++..+
T Consensus       254 ~~~l~~~~  261 (315)
T PRK06196        254 QVWAATSP  261 (315)
T ss_pred             HHHHhcCC
Confidence            99988654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.60  E-value=3.2e-14  Score=113.31  Aligned_cols=197  Identities=16%  Similarity=0.185  Sum_probs=125.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.++++.|+++|++|++++|+.++.. ...    ..+.....++.++.+|++|++++.++++.     ..+|+
T Consensus        18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~----~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELE-EAA----AHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999765421 110    01111124677899999999988766653     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC-----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~-----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+++...                    .+..++++++     .  +..+||++||...+.....       ...+...
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~~~~~~  165 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EVMDTIA  165 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------cccCcch
Confidence            999998521                    1233344432     2  4568999999765432111       0012233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|..+|.+++       ..++++++++|+.+-.+... .....+........++..         +...+|+++.+.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~va~~~~  235 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-GTLERLGEDLLAHTPLGR---------LGDDEDLKGAAL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-hhhHHHHHHHHhcCCCCC---------CcCHHHHHHHHH
Confidence            4 88998888764       24799999999988665321 222333333332222222         234799999998


Q ss_pred             HHhcCc--cccCceEEecCCC
Q 024575          201 QVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (265)
                      .++...  ...|..+.+.++.
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        236 LLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHhCccccCccCCEEEECCCe
Confidence            887653  2357788877653

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=2.6e-14  Score=113.39  Aligned_cols=192  Identities=15%  Similarity=0.194  Sum_probs=123.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----C-cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G-FD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~-~d   74 (265)
                      |||+|+||+++++.|++.|++|+++.++.......+.       .....++.++++|+++++++.++++..     . +|
T Consensus        11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642         11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999987765433111110       111246888999999999888777631     2 89


Q ss_pred             EEEEcCCCCc--------------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCC
Q 024575           75 VVYDINGREA--------------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        75 ~vi~~a~~~~--------------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                      ++||+++...                          .+...++++    +.  +..++|++||....           .+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~  152 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------NP  152 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------CC
Confidence            9999997420                          012233333    22  45689999985432           12


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      ..+...| .+|...|.+++       ..+++++.++||.+..+.................  .+.       ..+.+.+|
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~  223 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAAT--TPL-------RKVTTPQE  223 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhc--CCc-------CCCCCHHH
Confidence            2233345 99999998874       2579999999998866531111111111112111  111       23677899


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCCC
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++..++..+  ...|+.+.+.++.
T Consensus       224 va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        224 FADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            999999998753  3467788887764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.59  E-value=3.1e-14  Score=106.27  Aligned_cols=221  Identities=17%  Similarity=0.121  Sum_probs=161.3

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEE-cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||-|.+|..++..|... |.+-++++ -..+. ...+            ..-.++..|+.|...+.++..+..+|.+||
T Consensus        50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~H  116 (366)
T KOG2774|consen   50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVH  116 (366)
T ss_pred             ecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc------------ccCCchhhhhhccccHHHhhcccccceeee
Confidence            799999999999999876 65544444 22222 1111            334578899999999999998889999999


Q ss_pred             cCCC---------------CccchHHHHHhCC-CCCcEEEEecceeeecCCCC-CCCCCCCCCccccc-cchhhHHHHH-
Q 024575           79 INGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTESVL-  139 (265)
Q Consensus        79 ~a~~---------------~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~-~~~e~~~~~~~~~~-~~k~~~E~~~-  139 (265)
                      +.+.               |+.+..|+++.++ ..-++..-||+++||+.+.. |..+-.-..|...| .||..+|.+- 
T Consensus       117 fSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE  196 (366)
T KOG2774|consen  117 FSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE  196 (366)
T ss_pred             HHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence            8653               5678899999877 44466778999999976543 33333344667766 8888877653 


Q ss_pred             ---hhcCCceeEeecceeeCC---C-CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc--cC
Q 024575          140 ---ESKGVNWTSLRPVYIYGP---L-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--SR  210 (265)
Q Consensus       140 ---~~~~~~~~i~r~~~i~g~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~  210 (265)
                         .+.|+..-.+|.+.++..   + ....+....+..++++.....+-.++...++.+.+|+-++++.++..+..  ..
T Consensus       197 y~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkr  276 (366)
T KOG2774|consen  197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKR  276 (366)
T ss_pred             HHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhh
Confidence               467899999998888763   2 22333444555555555445556778899999999999999998876542  45


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhC
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      +.||+++ ...|..|+++.+.+.+.
T Consensus       277 r~ynvt~-~sftpee~~~~~~~~~p  300 (366)
T KOG2774|consen  277 RTYNVTG-FSFTPEEIADAIRRVMP  300 (366)
T ss_pred             heeeece-eccCHHHHHHHHHhhCC
Confidence            7999997 78999999999999875

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.4e-14  Score=113.34  Aligned_cols=189  Identities=21%  Similarity=0.245  Sum_probs=119.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+........        ......+.++.+|+++.+++..+++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500         12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAAR--------AELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999754321110        11124677899999998877655442     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC----CCCCcEEEEecce-eeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~----~~~~~~v~~Ss~~-~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||++|...                    .+..++++++    +...++|++||.. .++.            .....| 
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------------~~~~~Y~  151 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------------PNSSVYA  151 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------------CCccHHH
Confidence            999998631                    1133444443    3334677766643 3321            112334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .+|...|.+++       ..++++++++||.+++|...     ......+........++.         -+...+|+++
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~  222 (249)
T PRK06500        152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAK  222 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            88999888773       24899999999999987311     111112222222222111         1346899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      ++.+++....  ..|..+.+.++
T Consensus       223 ~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        223 AVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHcCccccCccCCeEEECCC
Confidence            9999886533  24556666655

>PRK12743 oxidoreductase; Provisional

Probab=99.59  E-value=7.1e-14  Score=111.11  Aligned_cols=195  Identities=14%  Similarity=0.110  Sum_probs=123.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.|++....+.+.    ..+......+.++.+|+++.+++..++++     ..+|+
T Consensus         8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998775543221111    11111134688999999999888776653     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                    +...++++    +.   +..++|++||....           .+..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~~~~~  152 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLPGASA  152 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCCCcch
Confidence            9999986321                    12223333    21   23589999986532           12222333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+++       ..+++++.++||.+.++..... ............++         ..+.+.+|+++++.
T Consensus       153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  222 (256)
T PRK12743        153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGIPL---------GRPGDTHEIASLVA  222 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            4 88988887753       3579999999999998742111 11111111111111         11346899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      .++....  ..|..+.+.++..
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             HHhCccccCcCCcEEEECCCcc
Confidence            8886543  3577888887753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.59  E-value=5.3e-14  Score=111.78  Aligned_cols=196  Identities=13%  Similarity=0.121  Sum_probs=126.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|.++|++|++++|+..... .+.    ..+.....++.++.+|+++.+++.++++.     .++|+
T Consensus        17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~-~~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         17 TGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVV----DEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765421 111    11111124677889999999988776653     26899


Q ss_pred             EEEcCCCCcc-------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcc-ccc
Q 024575           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRH  129 (265)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~~~  129 (265)
                      +||+++....                   +..++++++    +  +..++|++||.....           +..+. .|.
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~  160 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINMTSYA  160 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CCCCcchhH
Confidence            9999985311                   122334432    2  345899999976431           11122 234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+++       ..+++++++.||.+..+.......+.+.....+..++         ..+...+|++++++.+
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l  231 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            89999888763       3578999999998876642211122222222221111         1245689999999999


Q ss_pred             hcCcc--ccCceEEecCCCcc
Q 024575          203 LGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +....  ..|+.+++.++...
T Consensus       232 ~~~~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        232 CSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             cCccccCccCCEEEECCCccc
Confidence            86542  35788999887543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.2e-14  Score=115.62  Aligned_cols=189  Identities=14%  Similarity=0.063  Sum_probs=116.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|++.|++|++++|++.... .+.    ........++.++.+|++|++++.+++. .++|+|||++
T Consensus         8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a   81 (257)
T PRK09291          8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVT-ALR----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA   81 (257)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence            799999999999999999999999999865421 110    0001112468899999999999988775 3899999999


Q ss_pred             CCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhh
Q 024575           81 GREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (265)
Q Consensus        81 ~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (265)
                      +....                    +    .+.+++.+.  +.+++|++||...+..          ......|..+|..
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~----------~~~~~~Y~~sK~a  151 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT----------GPFTGAYCASKHA  151 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC----------CCCcchhHHHHHH
Confidence            85321                    1    222334433  5579999998754311          1111223488988


Q ss_pred             HHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCC-cccCCCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          135 TESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       135 ~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      +|.+.       +..+++++++|||.+..+... .....+........ .+.. .+.....+....+|+++.+..++..+
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFND-TMAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchh-hhhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCC
Confidence            88764       236899999999987543211 00100100000000 0111 11122335578899999999888765


Q ss_pred             c
Q 024575          207 K  207 (265)
Q Consensus       207 ~  207 (265)
                      .
T Consensus       230 ~  230 (257)
T PRK09291        230 T  230 (257)
T ss_pred             C
Confidence            4

>PRK08017 oxidoreductase; Provisional

Probab=99.59  E-value=1.9e-14  Score=114.40  Aligned_cols=177  Identities=15%  Similarity=0.128  Sum_probs=117.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||+|++|+++++.|+++|++|++++|++++.. .+.          ..++..+.+|+.+.+++.++++.      ..+|
T Consensus         8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVA-RMN----------SLGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH-HHH----------hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            799999999999999999999999999865421 111          13578899999998877665542      2579


Q ss_pred             EEEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-
Q 024575           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (265)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-  127 (265)
                      .++|++|.....                        ...++++++  +.+++|++||...+..           ..... 
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  145 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-----------TPGRGA  145 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-----------CCCccH
Confidence            999999863210                        112355554  5678999998654311           11122 


Q ss_pred             cccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCC-cccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      |..+|...|.+.       ...++++++++||.+..+.         ........ .......+...+.+++.+|+++++
T Consensus       146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF---------TDNVNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch---------hhcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            348898888764       3468999999998775542         11111111 111112222334678999999999


Q ss_pred             HHHhcCccc
Q 024575          200 VQVLGNEKA  208 (265)
Q Consensus       200 ~~~~~~~~~  208 (265)
                      ..+++++..
T Consensus       217 ~~~~~~~~~  225 (256)
T PRK08017        217 RHALESPKP  225 (256)
T ss_pred             HHHHhCCCC
Confidence            999987764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=8.4e-14  Score=110.39  Aligned_cols=193  Identities=15%  Similarity=0.227  Sum_probs=126.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|..+++.|+++|++|++++|++.+.....     ..+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217         11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV-----AECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421111     11111124678899999998887766653     25899


Q ss_pred             EEEcCCCCccc-----------------------------h----HHHHHhCC---CCCcEEEEecceeeecCCCCCCCC
Q 024575           76 VYDINGREADE-----------------------------V----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (265)
Q Consensus        76 vi~~a~~~~~~-----------------------------~----~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e  119 (265)
                      |||++|.....                             .    +.++..+.   ...+++++||...++..       
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-------  158 (253)
T PRK08217         86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-------  158 (253)
T ss_pred             EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-------
Confidence            99999852110                             0    11222221   23468999987765321       


Q ss_pred             CCCCCccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeH
Q 024575          120 TDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (265)
Q Consensus       120 ~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (265)
                          ....|..+|...+.+++       ..+++++.++||.+.++... ...+..........+.         ..+.+.
T Consensus       159 ----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~---------~~~~~~  224 (253)
T PRK08217        159 ----GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA-AMKPEALERLEKMIPV---------GRLGEP  224 (253)
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc-ccCHHHHHHHHhcCCc---------CCCcCH
Confidence                11223388988887753       35899999999999887532 1222222222222211         234578


Q ss_pred             HHHHHHHHHHhcCccccCceEEecCCC
Q 024575          193 KDLARAFVQVLGNEKASRQVFNISGEK  219 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (265)
                      +|+++++..++......|++++++++.
T Consensus       225 ~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        225 EEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            999999999987655578899998864

>PLN02253 xanthoxin dehydrogenase

Probab=99.58  E-value=1e-14  Score=117.54  Aligned_cols=203  Identities=16%  Similarity=0.132  Sum_probs=125.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+. ...++.++++|++|.+++.+++..     .++|+
T Consensus        24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVC-----DSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999998754421110     0010 024688999999999988877763     26999


Q ss_pred             EEEcCCCCcc----------------------chHHHHHh----CC--CCCcEEEEeccee-eecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREAD----------------------EVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~~----~~--~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~  126 (265)
                      +||++|....                      +..+++++    +.  +..++|++||... ++.           ..+.
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~  166 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----------LGPH  166 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------CCCc
Confidence            9999986311                      11223333    21  3357888887654 211           1122


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-----hHHHHHHHHcCCcccCCCCCC-ceeeeeeHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGI-QVTQLGHVK  193 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  193 (265)
                      .|..+|...|.+.+       ..++++..++||.+.++......     ....+.....     ...... .....++++
T Consensus       167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~  241 (280)
T PLN02253        167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA-----FAGKNANLKGVELTVD  241 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH-----HhhcCCCCcCCCCCHH
Confidence            34489999988763       24799999999998776321100     0000000000     000000 001236799


Q ss_pred             HHHHHHHHHhcCcc--ccCceEEecCCCccCHHH
Q 024575          194 DLARAFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~e  225 (265)
                      |++++++.++....  ..|+.+.+.++...+..+
T Consensus       242 dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        242 DVANAVLFLASDEARYISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             HHHHHHHhhcCcccccccCcEEEECCchhhccch
Confidence            99999999886532  357788898876544433

>PRK08643 acetoin reductase; Validated

Probab=99.57  E-value=1.2e-13  Score=109.76  Aligned_cols=199  Identities=17%  Similarity=0.260  Sum_probs=123.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|.++++.|+++|++|++++|+.+......     ..+.....++.++++|+++++++.++++.     .++|+
T Consensus         8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA-----DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421111     11111124678899999999988777663     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                    +    ++.+++.++   ...++|++||...+...          .....|
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y  152 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN----------PELAVY  152 (256)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----------CCCchh
Confidence            9999986321                    0    112233332   23589999987643111          011223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHc--CCcc-----cCCCCCCceeeeeeHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI-----PIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~i~~~D  194 (265)
                      ..+|...+.+.+       ..+++++.++||.+.+|..     ..+......  +...     .+... .....+...+|
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  226 (256)
T PRK08643        153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMM-----FDIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPED  226 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhh-----hHHHhhhccccCCCchHHHHHHhcc-CCCCCCcCHHH
Confidence            488988877653       4689999999999887631     111100000  0000     00000 00123557899


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      +++++..++...  ...|+.+.+.++..
T Consensus       227 va~~~~~L~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        227 VANCVSFLAGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCee
Confidence            999999988654  34677888877643

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.9e-14  Score=114.23  Aligned_cols=187  Identities=17%  Similarity=0.107  Sum_probs=120.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||||++|++++++|+++|++|++++|++.... .            ..+++++++|++|++++.++++.     ..+|+
T Consensus        10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179         10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAA-P------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-c------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999865521 1            25788999999999999888863     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +..+++++    ++  +.+++|++||...+...          +....|.
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~  146 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA----------PYMALYA  146 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC----------CCccHHH
Confidence            9999986321                    12223333    43  67899999997654211          0112244


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-----hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .+|...+.+++       +.++++++++||.+.++......     ...+- ... ........  .........+|+++
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~--~~~~~~~~~~~va~  222 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYD-RER-AVVSKAVA--KAVKKADAPEVVAD  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhH-HHH-HHHHHHHH--hccccCCCHHHHHH
Confidence            88988887753       46899999999998886421110     00000 000 00000000  01112356799999


Q ss_pred             HHHHHhcCccccCceEEe
Q 024575          198 AFVQVLGNEKASRQVFNI  215 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~i  215 (265)
                      .++.++..+.. ...|..
T Consensus       223 ~~~~~~~~~~~-~~~~~~  239 (270)
T PRK06179        223 TVVKAALGPWP-KMRYTA  239 (270)
T ss_pred             HHHHHHcCCCC-CeeEec
Confidence            99999887653 345543

>PRK12742 oxidoreductase; Provisional

Probab=99.57  E-value=1.7e-13  Score=107.65  Aligned_cols=188  Identities=18%  Similarity=0.193  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|.||++++++|+++|++|+++.|+.....+.+..         ..++.++.+|++|.+++.+.++.. .+|++||+
T Consensus        12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742         12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ---------ETGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---------HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            79999999999999999999998887653321111110         124678899999998888877643 48999999


Q ss_pred             CCCCccc--------------------hHHH----HHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhh
Q 024575           80 NGREADE--------------------VEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (265)
Q Consensus        80 a~~~~~~--------------------~~~l----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (265)
                      +|.....                    ...+    +..++...++|++||.....          .+..+...| .+|..
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCCcchHHhHHH
Confidence            9863210                    1112    22233456899999865310          111223334 89999


Q ss_pred             HHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       135 ~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      .|.+++       ..++++++++||.+..+..... . ..........++         ..+...+|+++++..++....
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~-~~~~~~~~~~~~---------~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-G-PMKDMMHSFMAI---------KRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-c-HHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccc
Confidence            887763       3579999999999877642211 1 111111111111         124568999999999886543


Q ss_pred             --ccCceEEecCC
Q 024575          208 --ASRQVFNISGE  218 (265)
Q Consensus       208 --~~~~~~~i~~~  218 (265)
                        ..|..+.+.++
T Consensus       222 ~~~~G~~~~~dgg  234 (237)
T PRK12742        222 SFVTGAMHTIDGA  234 (237)
T ss_pred             CcccCCEEEeCCC
Confidence              35677777665

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.57  E-value=1.2e-13  Score=109.65  Aligned_cols=194  Identities=15%  Similarity=0.139  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.+.....     ..+.....++.++.+|++|++++.+++..     ..+|+
T Consensus        15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-----AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421111     11111123577889999999988877653     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~----~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +...+++    .+.  +..++|++||.....           +..+...|
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y  158 (254)
T PRK08085         90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------GRDTITPY  158 (254)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------CCCCCcch
Confidence            9999986311                    1112223    232  457899999875421           11122234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+++       ..+++++.++||++..+...... ...+........+         ...+...+|+++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~  229 (254)
T PRK08085        159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWGDPQELIGAAV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88998888763       35899999999999887421100 0111112221111         123556899999999


Q ss_pred             HHhcCc--cccCceEEecCCC
Q 024575          201 QVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (265)
                      .++...  ...|+...+.++.
T Consensus       230 ~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        230 FLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHhCccccCCcCCEEEECCCe
Confidence            988653  3357777777664

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.57  E-value=1.3e-13  Score=109.11  Aligned_cols=195  Identities=17%  Similarity=0.172  Sum_probs=118.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+.+++.|+++|++|+++.++.........    ..+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETA----DAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999887654332111110    11111124688999999999888776653     26899


Q ss_pred             EEEcCCCCcc---------------------chHHHHH----hCC--C---CCcEEEEecceee-ecCCCCCCCCCCCCC
Q 024575           76 VYDINGREAD---------------------EVEPILD----ALP--N---LEQFIYCSSAGVY-LKSDLLPHCETDTVD  124 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~----~~~--~---~~~~v~~Ss~~~~-~~~~~~~~~e~~~~~  124 (265)
                      +||++|....                     +...++.    .+.  +   ..++|++||...+ +...          .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------~  153 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN----------E  153 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC----------C
Confidence            9999985311                     1112222    221  1   2359999986542 2110          0


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...|..+|..++.+.+       ..++++++++||.+..|.....-...........  .+.       .-+...+|+++
T Consensus       154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~e~va~  224 (248)
T PRK06947        154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQ--TPL-------GRAGEADEVAE  224 (248)
T ss_pred             CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhc--CCC-------CCCcCHHHHHH
Confidence            1124488988886652       3479999999999988742110011111111111  110       11346899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      .+++++.++.  ..|+.+.+.++
T Consensus       225 ~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        225 TIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHcCccccCcCCceEeeCCC
Confidence            9999887653  35777777654

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.57  E-value=1.7e-13  Score=108.73  Aligned_cols=195  Identities=15%  Similarity=0.209  Sum_probs=124.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||.+++++|+++|++|++++|++.+.....     ..+.....++.++.+|+++++++.+++++     ..+|+
T Consensus        12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478         12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865522111     11111124678899999999988777653     26899


Q ss_pred             EEEcCCCCcc-------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                         ..+.++..++  +..++|++||...+..          +..+...
T Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------~~~~~~~  156 (254)
T PRK07478         87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------GFPGMAA  156 (254)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----------CCCCcch
Confidence            9999986310                         0222344443  4578999999765421          1111223


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.+       ..+++++.++||.+-.+..... .............+         ...+...+|+++.+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  227 (254)
T PRK07478        157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQPEEIAQAA  227 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            4 88988887753       3479999999999876631100 00111111111111         11345689999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++.++.  ..|+.+.+.++.
T Consensus       228 ~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        228 LFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHcCchhcCCCCCeEEeCCch
Confidence            99886543  357777777654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.57  E-value=2.8e-14  Score=113.02  Aligned_cols=195  Identities=18%  Similarity=0.206  Sum_probs=121.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|++|+++++.|+++|++|++++|+.....+.+.+    .+...  ...+..+.+|+++.+++.++++.     ..+
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAA----EINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH----HHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            79999999999999999999999999984331211110    00000  12245688999999988777653     268


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||++|....                        .+..++++++  +.+++|++||...+.....          ...
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~----------~~~  150 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD----------YTA  150 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC----------Cch
Confidence            999999986321                        2345556655  5679999999876532111          112


Q ss_pred             cccchhhHHHHHhh-------c--CCceeEeecceeeCCCCCCchh----HHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          128 RHKGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       128 ~~~~k~~~E~~~~~-------~--~~~~~i~r~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      |..+|...+.+.+.       .  +++++.++||.+.+|.......    ........+.  +       ....+.+++|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~  221 (251)
T PRK07069        151 YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARG--V-------PLGRLGEPDD  221 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhcc--C-------CCCCCcCHHH
Confidence            33888888776531       2  4889999999988874211000    0011111111  1       1123457899


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCC
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~  218 (265)
                      ++++++.++..+  ...|+.+.+.++
T Consensus       222 va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        222 VAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCC
Confidence            999999977654  235666666654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.56  E-value=1.2e-13  Score=109.33  Aligned_cols=192  Identities=15%  Similarity=0.157  Sum_probs=123.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.....       ...+......+.++.+|+++.+++.++++.     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832        11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSET-------QQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHH-------HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998653210       011111124688999999999988876653     26999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                    ....++++    +.  + ..++|++||...+....          ....|
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y  153 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI----------RVPSY  153 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC----------CCchh
Confidence            9999986321                    11223333    22  2 46899999987653211          11224


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ..+|...+.+++       ..+++++.++||.+..+........ ........  ..       ....++..+|+|++++
T Consensus       154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~dva~~~~  224 (248)
T TIGR01832       154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILE--RI-------PAGRWGTPDDIGGPAV  224 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHh--cC-------CCCCCcCHHHHHHHHH
Confidence            488988887763       2489999999999987742110000 00001110  01       1135778999999999


Q ss_pred             HHhcCcc--ccCceEEecCC
Q 024575          201 QVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~  218 (265)
                      .++....  ..|+.+.+.++
T Consensus       225 ~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       225 FLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHcCccccCcCCcEEEeCCC
Confidence            9987533  24666666665

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=5.3e-14  Score=110.68  Aligned_cols=174  Identities=21%  Similarity=0.254  Sum_probs=116.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|.+++++|+++|++|++++|++..... ..    ..+.....++.++.+|+++++++.++++.     .++|+
T Consensus        13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666         13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKA-VA----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999999999998654211 10    11111224688899999999988887763     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||++|....                    +..+++++    +.  +.+++|++||...+..           ..+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y  156 (239)
T PRK07666         88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG-----------AAVTSAY  156 (239)
T ss_pred             EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC-----------CCCCcch
Confidence            9999986421                    11223333    22  4678999998765421           1122234


Q ss_pred             -cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.++       ++.+++++++|||.+.++.....           .  .. ..   ....++..+|+++.+..
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~--~~-~~---~~~~~~~~~~~a~~~~~  219 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------G--LT-DG---NPDKVMQPEDLAEFIVA  219 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------c--cc-cc---CCCCCCCHHHHHHHHHH
Confidence             7787776664       24589999999999887631100           0  00 01   11245778999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      +++++.
T Consensus       220 ~l~~~~  225 (239)
T PRK07666        220 QLKLNK  225 (239)
T ss_pred             HHhCCC
Confidence            998763

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.56  E-value=7.1e-14  Score=111.42  Aligned_cols=193  Identities=13%  Similarity=0.177  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.+|++++++|+++|++|++++|+.....+..        .....++.++.+|+++++++.++++.     ..+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265         12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVA--------ASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421111        11124688999999999988877763     26899


Q ss_pred             EEEcCCCCcc-------------------c----hHHHHHhC-CCCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           76 VYDINGREAD-------------------E----VEPILDAL-PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        76 vi~~a~~~~~-------------------~----~~~l~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      +||++|....                   +    .+.++..+ ++..++|++||.......          .....|..+
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~Y~as  153 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ----------TGRWLYPAS  153 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC----------CCCchhHHH
Confidence            9999985311                   1    11223333 244689999987643111          011123388


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      |...+.+.+       ..+++++.++||.+..+......  .......... ...       ....+...+|+|++++.+
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~-~~~-------p~~r~~~p~dva~~~~~l  225 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA-PFH-------LLGRVGDPEEVAQVVAFL  225 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc-ccC-------CCCCccCHHHHHHHHHHH
Confidence            888877663       25899999999988766310000  0000000000 000       011245689999999999


Q ss_pred             hcCc--cccCceEEecCCC
Q 024575          203 LGNE--KASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (265)
                      +...  ...|+.+.+.++.
T Consensus       226 ~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        226 CSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             cCccccCccCcEEEECCCe
Confidence            8753  2367788888764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.1e-13  Score=110.10  Aligned_cols=205  Identities=14%  Similarity=0.113  Sum_probs=121.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.++++.|+++|++|+++.++.......... ....+.....++.++++|+++++++.+++..     .++|+
T Consensus        14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE-TVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH-HHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            79999999999999999999988887765432111110 0011111123678899999999988877763     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      +||++|...                    .+...++++    ++...++++++|......          ......|..+
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~----------~~~~~~Y~~s  162 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF----------TPFYSAYAGS  162 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc----------CCCcccchhh
Confidence            999998621                    112223333    222346666533222110          0111234499


Q ss_pred             hhhHHHHHhh-------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          132 KLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       132 k~~~E~~~~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      |...|.+.+.       .+++++.++||.+.++............ .  .... ..........+.+.+|+++++..++.
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~--~~~~-~~~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVA-Y--HKTA-AALSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhh-c--cccc-ccccccccCCCCCHHHHHHHHHHhhc
Confidence            9999988742       3799999999998776321110000000 0  0000 00111111246789999999999998


Q ss_pred             Ccc-ccCceEEecCCCc
Q 024575          205 NEK-ASRQVFNISGEKY  220 (265)
Q Consensus       205 ~~~-~~~~~~~i~~~~~  220 (265)
                      ... ..|+.+++.++..
T Consensus       239 ~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        239 DGWWITGQTILINGGYT  255 (257)
T ss_pred             ccceeecceEeecCCcc
Confidence            532 2578898887654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.56  E-value=2.5e-13  Score=106.62  Aligned_cols=188  Identities=13%  Similarity=0.086  Sum_probs=121.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|.||++++++|+++|++|++++|++......+        .  ..++.++.+|+++.+++.+++...     .+|+
T Consensus         8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGL--------R--QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--------H--HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            799999999999999999999999999865421111        1  135788999999998887766532     5899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--C--CCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||++|....                    .    .+.++..++  +  ..++|++||......          ......
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~----------~~~~~~  147 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG----------SDKHIA  147 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC----------CCCCcc
Confidence            9999986311                    0    112333333  2  357999988653210          011123


Q ss_pred             cccchhhHHHHHhh------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          128 RHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       128 ~~~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      |..+|...+.+++.      .+++++.++||.+..+....   ...........++.         -+...+|+++++..
T Consensus       148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~~  215 (236)
T PRK06483        148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVDY  215 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHHH
Confidence            44999999988642      35899999999875432111   11111111111111         12347999999999


Q ss_pred             HhcCccccCceEEecCCCc
Q 024575          202 VLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~  220 (265)
                      ++......|+.+.+.++..
T Consensus       216 l~~~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        216 LLTSCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HhcCCCcCCcEEEeCcccc
Confidence            9876555778888877643

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.56  E-value=6.5e-14  Score=109.99  Aligned_cols=184  Identities=18%  Similarity=0.203  Sum_probs=118.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|++.+.....     ..+.. ..++.++.+|+.+.+++.++++.     .++|+
T Consensus        12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326         12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAA-----AELNN-KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHH-----HHHhc-cCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421110     01111 15688899999999988877763     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccc-cc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~~  129 (265)
                      |||+++....                    +...++++    ++ +..++|++||...+..           ..+.. |.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~y~  154 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----------FAGGAAYN  154 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----------CCCCchHH
Confidence            9999875321                    11123333    33 5568999998765321           11122 33


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..+++++++||+.+.++....             .  .  ..  .....+..+|+++.++.+
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------------~--~--~~--~~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------------T--P--SE--KDAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc-------------c--c--ch--hhhccCCHHHHHHHHHHH
Confidence            77876666542       358999999999887653110             0  0  00  001136789999999999


Q ss_pred             hcCcc-ccCceEEecCCCc
Q 024575          203 LGNEK-ASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~~-~~~~~~~i~~~~~  220 (265)
                      +..+. .......+..+.+
T Consensus       216 l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        216 LKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HhCCccccccceEEecCCC
Confidence            97764 2344555554443

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.9e-13  Score=108.35  Aligned_cols=189  Identities=16%  Similarity=0.099  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+....   ..          ..++.++.+|+++++++.+++...     .+|+
T Consensus        12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856         12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VD----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hc----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986540   01          246888999999999888777632     5799


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||++|....                    +...++++    +.   +..++|++||...+..           ......
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~~~~~~  147 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----------SPGTAA  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----------CCCCch
Confidence            9999985311                    12223333    22   2368999999765321           111233


Q ss_pred             c-cchhhHHHHHhh------cCCceeEeecceeeCCCCCCchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+++.      ..++++.++||.+..+....... ...........+         ...+...+|++++++
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~va~~~~  218 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATPADIAWACL  218 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCHHHHHHHHH
Confidence            4 889998887642      23899999999887763111000 001111111111         112456899999999


Q ss_pred             HHhcCc--cccCceEEecCCCccC
Q 024575          201 QVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      .++...  ...|..+.+.++...+
T Consensus       219 ~L~~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        219 FLASDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             HHcCcccCCccCCEEEECCCcchH
Confidence            988653  3467888888775443

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.4e-13  Score=109.48  Aligned_cols=193  Identities=16%  Similarity=0.205  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|+++... .+.    ..+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLK-ELR----AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865421 111    11111124688999999999988877763     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C--------CCcEEEEecceeeecCCCCCCCCCC
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N--------LEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~--------~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                      +||+++....                    +...++++    +.  .        ..++|++||...+..          
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  159 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV----------  159 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----------
Confidence            9999985211                    12222222    11  1        358999998765421          


Q ss_pred             CCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                       ..+...| .+|...+.+++       ..++++++++||.++++.....+..........  .++       ...+...+
T Consensus       160 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~p~  229 (258)
T PRK06949        160 -LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVS--MLP-------RKRVGKPE  229 (258)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHh--cCC-------CCCCcCHH
Confidence             1112234 78888777653       258999999999999885322111111111111  111       11344479


Q ss_pred             HHHHHHHHHhcCcc--ccCceEEecCC
Q 024575          194 DLARAFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      |+++.+.+++....  ..|..+.+.++
T Consensus       230 ~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        230 DLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            99999999886432  35666666554

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.1e-13  Score=110.36  Aligned_cols=197  Identities=18%  Similarity=0.207  Sum_probs=124.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh--hhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|+||+++++.|+++|++|++++|+++.... ..    ..+..  ...++.++.+|+++++++.++++.     ..+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063         13 TGAAQGIGAAIARAFAREGAAVALADLDAALAER-AA----AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999997654211 11    01111  124578899999999888877653     269


Q ss_pred             cEEEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||++|....                    +.    +.++..++  +..++|++||...+..           .....
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-----------IPGCF  156 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC-----------CCCch
Confidence            999999986311                    11    22233332  4568999999765321           11122


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh----HH-HHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EW-FFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      .| .+|...+.+.+       ..+++++.++||.+-.+.....+.    .. .........+.         .-+...+|
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~  227 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM---------KRIGRPEE  227 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC---------CCCCCHHH
Confidence            34 88988887763       357999999999886653110000    00 00111111111         12446899


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++++++.++.+..  ..|+.+.+.++..+.
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECCCeeee
Confidence            9999999886543  367788887765443

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.55  E-value=1.2e-13  Score=102.63  Aligned_cols=199  Identities=20%  Similarity=0.235  Sum_probs=138.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      .|+.||+|+++++.....++.|..+.|+..+....-.          ...+.++++|.....-++..+.  ++..++.++
T Consensus        58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw----------~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~  125 (283)
T KOG4288|consen   58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSW----------PTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM  125 (283)
T ss_pred             hcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCC----------CcccchhhccccccCcchhhhc--CCcccHHHh
Confidence            4899999999999999999999999999876432221          2678888888877666666666  888888776


Q ss_pred             CCC----------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHH-hhcCCcee
Q 024575           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWT  147 (265)
Q Consensus        81 ~~~----------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~-~~~~~~~~  147 (265)
                      +..          .....+..++++  ++++|+|+|.... |         -.+..|..|+..|+++|..+ ..++++-+
T Consensus       126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~---------~~~~i~rGY~~gKR~AE~Ell~~~~~rgi  195 (283)
T KOG4288|consen  126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-G---------LPPLIPRGYIEGKREAEAELLKKFRFRGI  195 (283)
T ss_pred             cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-C---------CCCccchhhhccchHHHHHHHHhcCCCce
Confidence            642          223344455544  9999999996432 1         12445567789999999876 56789999


Q ss_pred             EeecceeeCCCCCCch------hHHHHHHHHcCC-----cccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEec
Q 024575          148 SLRPVYIYGPLNYNPV------EEWFFHRLKAGR-----PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (265)
Q Consensus       148 i~r~~~i~g~~~~~~~------~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (265)
                      ++|||.+||-....+.      ....+.+..+..     .+++.  +.-..+.+.++++|.+.+.++++|.-.|      
T Consensus       196 ilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f~G------  267 (283)
T KOG4288|consen  196 ILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDFKG------  267 (283)
T ss_pred             eeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCcCc------
Confidence            9999999997532221      122233333222     24443  3356789999999999999999986432      


Q ss_pred             CCCccCHHHHHHHHHH
Q 024575          217 GEKYVTFDGLARACAK  232 (265)
Q Consensus       217 ~~~~~s~~el~~~i~~  232 (265)
                         .+++.++.++-.+
T Consensus       268 ---vv~i~eI~~~a~k  280 (283)
T KOG4288|consen  268 ---VVTIEEIKKAAHK  280 (283)
T ss_pred             ---eeeHHHHHHHHHH
Confidence               4566666655443

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.4e-13  Score=107.76  Aligned_cols=196  Identities=17%  Similarity=0.230  Sum_probs=119.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----------   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----------   70 (265)
                      |||+|+||.+++++|++.|++|++..++.........    ..+......+..+.+|+++.+++..++..          
T Consensus        10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g   85 (252)
T PRK12747         10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   85 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH----HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcC
Confidence            7999999999999999999999887643322111110    11111124567888999998766554431          


Q ss_pred             -cCccEEEEcCCCCcc--------------------chHH----HHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           71 -KGFDVVYDINGREAD--------------------EVEP----ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        71 -~~~d~vi~~a~~~~~--------------------~~~~----l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                       ..+|++||+||....                    +...    ++..++...++|++||...+..           ...
T Consensus        86 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (252)
T PRK12747         86 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------LPD  154 (252)
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----------CCC
Confidence             169999999986311                    1112    2333333468999999876421           111


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...| .+|..++.+++       ..+++++.+.||.+.++.................  .      .....+..++|+++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~dva~  226 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATT--I------SAFNRLGEVEDIAD  226 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHh--c------CcccCCCCHHHHHH
Confidence            2234 89999887763       3589999999999988742110000001111000  0      01123567899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++..++....  ..|+.+.+.++.
T Consensus       227 ~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        227 TAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHcCccccCcCCcEEEecCCc
Confidence            9999886432  357788887764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.55  E-value=2.3e-13  Score=108.35  Aligned_cols=194  Identities=13%  Similarity=0.156  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||.+++++|+++|++|+++.|+. . .+.+.    ..+.....++.++.+|+++.+++.+++++.     .+|+
T Consensus        21 tGas~gIG~~ia~~l~~~G~~v~~~~~~~-~-~~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         21 TGGNTGLGQGYAVALAKAGADIIITTHGT-N-WDETR----RLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCc-H-HHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999972 2 11111    111112346889999999999888777632     6899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    ++.++..++  +..++|++||...+....          ....|.
T Consensus        95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  164 (258)
T PRK06935         95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK----------FVPAYT  164 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC----------CchhhH
Confidence            9999986311                    1    222333333  457899999987642211          111233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+++       ..+++++.++||.+..+...... ...........  ++       ...+...+|+++.+..
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~  235 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEPDDLMGAAVF  235 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence            88988888763       35899999999998776321000 00011111111  11       1235667999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++....  ..|+.+.+.++.
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        236 LASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HcChhhcCCCCCEEEECCCe
Confidence            886432  357788887764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=1.6e-13  Score=108.32  Aligned_cols=194  Identities=16%  Similarity=0.162  Sum_probs=121.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||||++|++++++|+++|++|+++ .|++.......     ..+.....++.++.+|+++++++.++++..     ++|
T Consensus        11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565         11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL-----EEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999998 88755421110     011111245889999999999887776532     699


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|||++|....                    +..+++++    +.  +.+++|++||...+....          ....|
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~----------~~~~y  155 (247)
T PRK05565         86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS----------CEVLY  155 (247)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----------CccHH
Confidence            99999986421                    12223333    22  457799999876542111          01123


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.++       ...+++++.++||.+..+...... ..........  .       ....+...+|++++++.
T Consensus       156 ~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~-~~~~~~~~~~--~-------~~~~~~~~~~va~~~~~  225 (247)
T PRK05565        156 SASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS-EEDKEGLAEE--I-------PLGRLGKPEEIAKVVLF  225 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC-hHHHHHHHhc--C-------CCCCCCCHHHHHHHHHH
Confidence            37776666554       245899999999998765422111 1111111110  0       11234578999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++....  ..|+.+.+.++.
T Consensus       226 l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        226 LASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HcCCccCCccCcEEEecCCc
Confidence            886543  357788877653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.55  E-value=1.4e-13  Score=110.67  Aligned_cols=194  Identities=14%  Similarity=0.208  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|++|++++|+..... .+.    ..+.....++.++++|+.+++++..+++.     .++|+
T Consensus        16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAE-AVV----AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421 111    11111124578899999999888776653     27899


Q ss_pred             EEEcCCCCcc-----------------------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCC
Q 024575           76 VYDINGREAD-----------------------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDL  114 (265)
Q Consensus        76 vi~~a~~~~~-----------------------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~  114 (265)
                      +||+++....                                   .    .+.+++.+.  +..++|++||...+..   
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---  167 (278)
T PRK08277         91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP---  167 (278)
T ss_pred             EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC---
Confidence            9999984210                                   0    112333333  4578999999876532   


Q ss_pred             CCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch------hHHHHHHHHcCCcccCC
Q 024575          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIP  180 (265)
Q Consensus       115 ~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~  180 (265)
                              ..+...| .+|...+.+++       ..+++++.++||.+..+......      ............+    
T Consensus       168 --------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p----  235 (278)
T PRK08277        168 --------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP----  235 (278)
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC----
Confidence                    1122234 88998888763       34899999999999887421100      0001111111111    


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcC-c--cccCceEEecCCC
Q 024575          181 GSGIQVTQLGHVKDLARAFVQVLGN-E--KASRQVFNISGEK  219 (265)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~-~--~~~~~~~~i~~~~  219 (265)
                           ..-+...+|+|++++.++.. .  ...|+.+.+.++.
T Consensus       236 -----~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        236 -----MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             -----ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence                 12345689999999998865 3  2357788887763

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.2e-13  Score=110.12  Aligned_cols=201  Identities=12%  Similarity=0.210  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~----~~~d~   75 (265)
                      |||+|.||++++++|+++|++|++++|+..+... ..    ..+... ..++.++.+|++|++++.++++.    ..+|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~   88 (263)
T PRK08339         14 TASSKGIGFGVARVLARAGADVILLSRNEENLKK-AR----EKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI   88 (263)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence            7999999999999999999999999998654211 11    011111 24688999999999988877763    25899


Q ss_pred             EEEcCCCCcc------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                        .++.++..++  +..++|++||...+..           ......|
T Consensus        89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~-----------~~~~~~y  157 (263)
T PRK08339         89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP-----------IPNIALS  157 (263)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC-----------CCcchhh
Confidence            9999986311                        1334445554  4578999999875311           1112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHH-HH-cC----CcccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-LK-AG----RPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~-~~-~~----~~~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|...+.+.+       ..|++++.+.||.+..+.     ...+... .. .+    +............-+...+|+
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  232 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR-----VIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEI  232 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH-----HHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHH
Confidence             77888777653       468999999999886652     1111000 00 00    000000000011235568999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCCccC
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      +++++.++...  ...|+.+.+.++..++
T Consensus       233 a~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        233 GYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHhcchhcCccCceEEECCCcccc
Confidence            99999988653  2367788888776554

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.55  E-value=6.6e-14  Score=111.34  Aligned_cols=171  Identities=16%  Similarity=0.213  Sum_probs=114.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+++.... +.+    .+.. ..++.++.+|+++.+++.++++.     ..+|+
T Consensus         8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~----~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          8 TGASSGIGQALAREYARQGATLGLVARRTDALQA-FAA----RLPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998654211 110    0000 12688999999999988777653     14899


Q ss_pred             EEEcCCCCcc---------------------chHH----HHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~----l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                     +...    ++.+++  +..++|++||...+...          .....|
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y  151 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL----------PGAGAY  151 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC----------CCCcch
Confidence            9999985311                     1222    333443  55789999986643110          111223


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.++       +..++++++++||.+.++...            ... ..       ...++..+|+++.++.
T Consensus       152 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------------~~~-~~-------~~~~~~~~~~a~~~~~  211 (257)
T PRK07024        152 SASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA------------HNP-YP-------MPFLMDADRFAARAAR  211 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh------------cCC-CC-------CCCccCHHHHHHHHHH
Confidence            48999888876       245899999999999876310            000 00       0013568999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      ++.+..
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            997654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.54  E-value=9.9e-14  Score=109.27  Aligned_cols=175  Identities=14%  Similarity=0.100  Sum_probs=116.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.+|+.++++|+++|++|++++|++.+... +.    ........++.++.+|+++.+++..+++.     .++|+
T Consensus        12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454         12 TGASSGIGKATALAFAKAGWDLALVARSQDALEA-LA----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211 11    11111124688899999999988776653     25899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    ++.+++.+.  +..++|++||...++..           .+...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  155 (241)
T PRK07454         87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF-----------PQWGAY  155 (241)
T ss_pred             EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC-----------CCccHH
Confidence            9999985211                    1    112333333  45789999998765321           112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++++|||.+-.+.....            ......    ....++..+|+|++++.
T Consensus       156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~~~~~~----~~~~~~~~~~va~~~~~  219 (241)
T PRK07454        156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------TVQADF----DRSAMLSPEQVAQTILH  219 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------cccccc----ccccCCCHHHHHHHHHH
Confidence             88888877652       3589999999999876631100            000000    01235679999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      ++..+.
T Consensus       220 l~~~~~  225 (241)
T PRK07454        220 LAQLPP  225 (241)
T ss_pred             HHcCCc
Confidence            998774

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=4.7e-13  Score=105.01  Aligned_cols=184  Identities=15%  Similarity=0.164  Sum_probs=118.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (265)
                      |||+|+||+++++.|+++|++|++++|++...   .           ..++.++.+|++++ +.+.+.+.  .+|++||+
T Consensus        11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~   74 (235)
T PRK06550         11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---L-----------SGNFHFLQLDLSDDLEPLFDWVP--SVDILCNT   74 (235)
T ss_pred             cCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---c-----------CCcEEEEECChHHHHHHHHHhhC--CCCEEEEC
Confidence            79999999999999999999999999976441   1           14678899999887 33333333  79999999


Q ss_pred             CCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           80 NGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        80 a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      +|...                     .+..+++++    +.  +..++|++||...+...          .....|..+|
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~sK  144 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG----------GGGAAYTASK  144 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------CCCcccHHHH
Confidence            98421                     012223333    22  34689999987653211          1112234788


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      ...+.+.+       ..++++++++||++.++.....+. ..+........+         ...+...+|+|++++.++.
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s  215 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLAS  215 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHcC
Confidence            88777653       358999999999998875322211 111111111111         1235668999999999986


Q ss_pred             Cc--cccCceEEecCCC
Q 024575          205 NE--KASRQVFNISGEK  219 (265)
Q Consensus       205 ~~--~~~~~~~~i~~~~  219 (265)
                      +.  ...|..+.+.++.
T Consensus       216 ~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        216 GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             hhhccCCCcEEEECCce
Confidence            53  3356777777663

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.54  E-value=3.6e-13  Score=106.42  Aligned_cols=194  Identities=19%  Similarity=0.252  Sum_probs=120.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.+..........    ..+......+..+.+|+.|.+++.+++++     .++|+
T Consensus         9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWL----EDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999886543322111000    01111123567789999999888777653     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    +    ++.++..+.  +..++|++||.....           +......|
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y  153 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQFGQTNY  153 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-----------CCCCChhH
Confidence            9999986321                    1    222334343  457899999865421           11122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.+|.... ..+..........+         ...+...+|++++++.
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~  223 (246)
T PRK12938        154 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAW  223 (246)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHHH
Confidence             78887776542       358999999999988774211 11222222221111         1234568999999998


Q ss_pred             HhcCc--cccCceEEecCCC
Q 024575          202 VLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (265)
                      ++..+  ...++.+.+.++.
T Consensus       224 l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        224 LASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             HcCcccCCccCcEEEECCcc
Confidence            88653  2357778777653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.54  E-value=6.8e-14  Score=110.14  Aligned_cols=168  Identities=18%  Similarity=0.161  Sum_probs=114.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (265)
                      |||||++|++++++|+++|++|++++|++.... .        +.....++.++.+|+++.+++.++++..  .+|.++|
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~-~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLD-E--------LHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-H--------HHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            799999999999999999999999999765421 1        1111246889999999999999888742  4789999


Q ss_pred             cCCCCc--------------------cchHHHHHhC----CCCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhh
Q 024575           79 INGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (265)
Q Consensus        79 ~a~~~~--------------------~~~~~l~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (265)
                      ++|...                    .+..++++++    ++..++|++||....-.          ......|..+|..
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~Y~asK~a  147 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA----------LPRAEAYGASKAA  147 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC----------CCCCchhhHHHHH
Confidence            887421                    1123344432    23467888888543210          1111234489998


Q ss_pred             HHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       135 ~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ++.+.+       ..++++++++||.++++....             ....       ....+..+|+++.++..++...
T Consensus       148 ~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------------~~~~-------~~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        148 VAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK-------------NTFA-------MPMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------------CCCC-------CCcccCHHHHHHHHHHHHhcCC
Confidence            888753       468999999999998874211             0000       0123678999999999998754

>PRK09242 tropinone reductase; Provisional

Probab=99.54  E-value=4.5e-13  Score=106.57  Aligned_cols=193  Identities=18%  Similarity=0.266  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|.||++++++|.++|++|++++|+.+.... +.    ..+...  ..++.++.+|+++++++.++++.     .++
T Consensus        15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQ-AR----DELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998654211 10    111111  24678899999999887766653     268


Q ss_pred             cEEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||++|....                    +...++++    ++  +..++|++||...+...           .+..
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~  158 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----------RSGA  158 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------CCCc
Confidence            999999986311                    12233333    33  45789999997664321           1222


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      .| .+|...+.+++       ..+++++.++||.+.++...... ...+........++         .-+...+|++.+
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  229 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAA  229 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            34 88888887763       35899999999999887532111 11122222221111         123347999999


Q ss_pred             HHHHhcCcc--ccCceEEecCC
Q 024575          199 FVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +..++....  ..|+.+.+.++
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            999886532  24677777765

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.54  E-value=3.5e-13  Score=106.14  Aligned_cols=195  Identities=21%  Similarity=0.287  Sum_probs=121.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|..........    ........++.++.+|+++++++.++++.     ..+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999984222111110    01111124688999999999888776652     25899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||++|....                    .    ++.++..++  +..++|++||.......          .....|.
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~~~~y~  151 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ----------FGQTNYS  151 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------CCcchhH
Confidence            9999985311                    1    112334444  55789999986532110          1112233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+++       ..+++++.++||.+.++... .+............++         ..+...+|+++++..+
T Consensus       152 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l  221 (242)
T TIGR01829       152 AAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM-AMREDVLNSIVAQIPV---------GRLGRPEEIAAAVAFL  221 (242)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-ccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            78876665542       35899999999998877421 1112222222222111         1234568999999887


Q ss_pred             hcCc--cccCceEEecCCC
Q 024575          203 LGNE--KASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (265)
                      +.++  ...|+.+.+.++.
T Consensus       222 ~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       222 ASEEAGYITGATLSINGGL  240 (242)
T ss_pred             cCchhcCccCCEEEecCCc
Confidence            7553  2467888888764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.3e-13  Score=109.06  Aligned_cols=180  Identities=13%  Similarity=0.116  Sum_probs=116.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.........     .+......+.++.+|+++++++.++++.     ..+|+
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLK-----LLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110     1111134688899999999888777653     26999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....+                        ++.++..++  +..++|++||...+..           ......|
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  149 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----------GPAMSSY  149 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----------CCCchHH
Confidence            99999863210                        122344444  5679999999765421           1112234


Q ss_pred             -cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCc--hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                       .+|...+.+.       +..++++++++||.+.++.....  ..........  ..        ....+++++|+|+.+
T Consensus       150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~~vA~~i  219 (270)
T PRK05650        150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVG--KL--------LEKSPITAADIADYI  219 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHH--HH--------hhcCCCCHHHHHHHH
Confidence             7888766554       23589999999999987642110  0000000000  00        012346799999999


Q ss_pred             HHHhcCc
Q 024575          200 VQVLGNE  206 (265)
Q Consensus       200 ~~~~~~~  206 (265)
                      +..+++.
T Consensus       220 ~~~l~~~  226 (270)
T PRK05650        220 YQQVAKG  226 (270)
T ss_pred             HHHHhCC
Confidence            9999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.9e-13  Score=108.03  Aligned_cols=193  Identities=13%  Similarity=0.131  Sum_probs=121.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.++++.|+++|++|++++|+++... .+.    ..+.....++.++.+|+++++++.++++.     .++|+
T Consensus        16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLD-EVA----EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421 111    11111124688899999999988776653     26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC-------CCCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL-------PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~-------~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+|+...                    .+..++.+++       .+..++|++||.....           +..+...
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  159 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGRGFAA  159 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCCCCch
Confidence            999998521                    1123344442       1346899999865321           1112233


Q ss_pred             c-cchhhHHHHHhh------cCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|..++.+++.      .+++++.++||.+..+..... -...+........+         ...+...+|++++++
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  230 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLGDPEDIAAAAV  230 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            4 899998887642      357889999998765521100 00111111111111         112446899999999


Q ss_pred             HHhcCc--cccCceEEecCC
Q 024575          201 QVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (265)
                      .++...  ...++.+.+.++
T Consensus       231 ~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        231 YLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             HHcCccccCcCCCEEEECCC
Confidence            988653  235667777664

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.7e-13  Score=112.94  Aligned_cols=186  Identities=16%  Similarity=0.169  Sum_probs=121.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++..... +.    ..+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~-~~----~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEA-LA----AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            7999999999999999999999999998654211 10    11112234678899999999988877653     26899


Q ss_pred             EEEcCCCCcc------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                        .++.++..++  +..++|++||...+....          ....|.
T Consensus        89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~----------~~~~Y~  158 (334)
T PRK07109         89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP----------LQSAYC  158 (334)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC----------cchHHH
Confidence            9999986321                        1233445544  457899999988753211          111233


Q ss_pred             cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 ~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|...+.+.+         ..++++++++||.+..|.     ..+. .......       ......+...+|+|++++
T Consensus       159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~-----~~~~-~~~~~~~-------~~~~~~~~~pe~vA~~i~  225 (334)
T PRK07109        159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ-----FDWA-RSRLPVE-------PQPVPPIYQPEVVADAIL  225 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch-----hhhh-hhhcccc-------ccCCCCCCCHHHHHHHHH
Confidence            88887776542         136999999999887762     1111 0000000       011224567899999999


Q ss_pred             HHhcCccccCceEEecC
Q 024575          201 QVLGNEKASRQVFNISG  217 (265)
Q Consensus       201 ~~~~~~~~~~~~~~i~~  217 (265)
                      .++.++.   +.+.+++
T Consensus       226 ~~~~~~~---~~~~vg~  239 (334)
T PRK07109        226 YAAEHPR---RELWVGG  239 (334)
T ss_pred             HHHhCCC---cEEEeCc
Confidence            9998763   3455554

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.53  E-value=2.5e-13  Score=107.14  Aligned_cols=191  Identities=18%  Similarity=0.223  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|+.|++..|+..+.....        .....++.++.+|+++.+++.+++++     .++|+
T Consensus        12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936         12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA--------AELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999988888755421110        01124678899999999988877652     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+++....                    +..+++++    +.  +..+||++||...+...          .....|.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~  153 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN----------PGQANYC  153 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC----------CCCcchH
Confidence            9999986321                    12223333    21  55789999996543111          0112233


Q ss_pred             cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.       ...++++++++||.+..+.... .......... . ..+       ...+...+|+++++..+
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~-~-~~~-------~~~~~~~~~ia~~~~~l  223 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQKEAIM-G-AIP-------MKRMGTGAEVASAVAYL  223 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHHHHHHh-c-CCC-------CCCCcCHHHHHHHHHHH
Confidence            6777655544       2357999999999876553211 1111000010 1 111       12245689999999888


Q ss_pred             hcCcc--ccCceEEecCCC
Q 024575          203 LGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (265)
                      +....  ..|+.+++.++.
T Consensus       224 ~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        224 ASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             cCccccCcCCCEEEECCCc
Confidence            86543  257889988764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.53  E-value=2.1e-13  Score=107.22  Aligned_cols=160  Identities=17%  Similarity=0.174  Sum_probs=112.9

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~   78 (265)
                      |||+|++|+++++.|+++|+ +|++++|++.+...  .          ..++.++.+|+.+.+++.++++.. .+|+|||
T Consensus        12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~----------~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264         12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--L----------GPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--c----------CCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999998 99999998765321  1          357889999999999998888743 4899999


Q ss_pred             cCCC-Cc--------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           79 INGR-EA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        79 ~a~~-~~--------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +++. ..                    ....+++++    +.  +..++|++||...+..           ..+...| .
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------~~~~~~y~~  148 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----------FPNLGTYSA  148 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----------CCCchHhHH
Confidence            9987 21                    112233343    22  5678999999776421           1122334 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|..+|.+.+       ..+++++++||+.+.++...             .  .  .      ...+..+|+++.++..+
T Consensus       149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~--~--~------~~~~~~~~~a~~~~~~~  205 (238)
T PRK08264        149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------------G--L--D------APKASPADVARQILDAL  205 (238)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------------c--C--C------cCCCCHHHHHHHHHHHH
Confidence            8888887653       24899999999988765210             0  0  0      01456788888888877


Q ss_pred             cCc
Q 024575          204 GNE  206 (265)
Q Consensus       204 ~~~  206 (265)
                      ...
T Consensus       206 ~~~  208 (238)
T PRK08264        206 EAG  208 (238)
T ss_pred             hCC
Confidence            754

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.6e-13  Score=106.26  Aligned_cols=194  Identities=18%  Similarity=0.174  Sum_probs=123.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||.+++++|+++|++|+++.|+..... .+.    ..+.....++..+.+|+++++++.++++.     ..+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALE-KLA----DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999765421 111    11111124678899999999988777653     27999


Q ss_pred             EEEcCCCCc--------------------cchHHHHHh----CC-C--CCcEEEEecceeeecCCCCCCCCCCCCCcc-c
Q 024575           76 VYDINGREA--------------------DEVEPILDA----LP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~----~~-~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~  127 (265)
                      +||++|...                    .+...++++    +. +  ..++|++||....-.         ...... .
T Consensus        90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~~~~~~  160 (253)
T PRK05867         90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVPQQVSH  160 (253)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCCCCccc
Confidence            999998631                    112223333    22 2  346888887653200         001112 2


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      |..+|...+.+.+       ..|++++.++||.+-.+.... . ...........+.         ..+...+|+|++++
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~  229 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRPEELAGLYL  229 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            3489998888763       358999999999987764211 1 1111111111111         12456899999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++....  ..|+.+.+.++.
T Consensus       230 ~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        230 YLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHcCcccCCcCCCeEEECCCc
Confidence            9986532  367788888764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.8e-13  Score=108.76  Aligned_cols=192  Identities=18%  Similarity=0.184  Sum_probs=118.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.+++++|+++|++|++++|+.........          ..+..++++|+++++++.++++.     .++|+
T Consensus        13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057         13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----------EVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----------HcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211100          11236789999999988877763     26899


Q ss_pred             EEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecce-eeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~-~~~~~~~~~~~e~~~~~~~  126 (265)
                      +||++|....                      +    +..++..++  +..++|++||.. +++..          ....
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~----------~~~~  152 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA----------TSQI  152 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC----------CCCc
Confidence            9999986311                      0    112233332  446788888854 33321          0112


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .|..+|...+.+.+       ..++++++++||.+.++.....+... ..... ......+     ...+..++|+++++
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~-~~~~~~~-----~~~~~~~~~~a~~~  225 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAA-RRLVHVP-----MGRFAEPEEIAAAV  225 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHH-HHHhcCC-----CCCCcCHHHHHHHH
Confidence            24488876655542       35899999999999887421111000 00000 0000111     11467799999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ..++....  ..++.+.+.++.
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        226 AFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHHhCccccCccCcEEEECCCe
Confidence            88876532  346677776653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.6e-13  Score=106.24  Aligned_cols=194  Identities=17%  Similarity=0.170  Sum_probs=124.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|++|++++++|+++|++|+++.|++.......     ..+.....++.++.+|+++.+++.++++..     .+|+
T Consensus        13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172         13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV-----ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421111     111122346889999999998888776532     5799


Q ss_pred             EEEcCCCCcc---------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                     ..    +.++..+.  +..++|++||...+...           .....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~  156 (253)
T PRK06172         88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA-----------PKMSI  156 (253)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------CCCch
Confidence            9999986311                     01    12223332  45689999997765321           12233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+       ..+++++.+.||.+-.+......  ............+         ...+...+|+++.
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~ia~~  227 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP---------VGRIGKVEEVASA  227 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC---------CCCccCHHHHHHH
Confidence            4 88988887763       25799999999988665311100  0111111111111         1124568999999


Q ss_pred             HHHHhcCc--cccCceEEecCCC
Q 024575          199 FVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++...  ...|+.+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        228 VLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHhCccccCcCCcEEEECCCc
Confidence            99988653  3467788887764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.52  E-value=8.2e-13  Score=104.67  Aligned_cols=192  Identities=15%  Similarity=0.130  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||++++++|+++|++|+++.|+.....       ...+.....++.++.+|+++++++.++++.     ..+|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPET-------QAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCchHHHH-------HHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999888643211       011112234688899999999998887763     26899


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                    +.    +.++..+.  + ..++|++||...+.....          ...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------~~~Y  156 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR----------VPSY  156 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC----------Ccch
Confidence            9999986321                    11    12223332  2 368999999876532111          1124


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ..+|...+.+.+       ..|++++.++||.+-.+...... ...........  ++.       ..+...+|+++++.
T Consensus       157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-------~~~~~peeva~~~~  227 (251)
T PRK12481        157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-------SRWGTPDDLAGPAI  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-------CCCcCHHHHHHHHH
Confidence            488988887753       46899999999998765311000 00011111111  111       12456899999999


Q ss_pred             HHhcCc--cccCceEEecCC
Q 024575          201 QVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (265)
                      .++...  ...|+.+.+.++
T Consensus       228 ~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        228 FLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHhCccccCcCCceEEECCC
Confidence            998653  235677777665

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.52  E-value=8.8e-13  Score=105.36  Aligned_cols=194  Identities=16%  Similarity=0.184  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.+|.+++++|+++|++|+++.|++++..+..     ..+.....++.++++|+++++++.+++.+     ..+|+
T Consensus        16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988765421111     11111123688899999999988887763     25899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    ...++..++  +..++|++||.....           +..+...|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  159 (265)
T PRK07097         91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-----------GRETVSAY  159 (265)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-----------CCCCCccH
Confidence            9999986321                    1    112333333  457899999864321           11122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-------hHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                       .+|..++.+.+       ..+++++.++||.+..+......       ...+........+         ...+...+|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  230 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPED  230 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHH
Confidence             88988887763       35899999999999887421100       0001111111101         112456899


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCCC
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++.+..++...  ...|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        231 LAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999998763  2357777777654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.52  E-value=5.6e-13  Score=105.71  Aligned_cols=193  Identities=13%  Similarity=0.149  Sum_probs=122.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.+++++|++.|++|++++|+...... +.    ..+.+....+.++++|+.+.+++.++++.     ..+|+
T Consensus        14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQA-VA----DAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211 11    11111123577899999999888776653     25899


Q ss_pred             EEEcCCCCcc---------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+++....                     +.    +.+++.++  +..+++++||...+.           +..+.+.
T Consensus        89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  157 (252)
T PRK07035         89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------PGDFQGI  157 (252)
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------CCCCCcc
Confidence            9999985210                     11    22333333  557899999865431           1112334


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|..++.+++       ..+++++.+.||.+..+...... ...........  .+       ...+...+|+++++
T Consensus       158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~  228 (252)
T PRK07035        158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAH--IP-------LRRHAEPSEMAGAV  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHcc--CC-------CCCcCCHHHHHHHH
Confidence            5 89999998764       34899999999988665311100 01111111111  11       11245689999999


Q ss_pred             HHHhcCcc--ccCceEEecCC
Q 024575          200 VQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +.++.+..  ..|+.+.+.++
T Consensus       229 ~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            99887543  35777777765

>PRK08589 short chain dehydrogenase; Validated

Probab=99.51  E-value=7.4e-13  Score=106.20  Aligned_cols=198  Identities=17%  Similarity=0.158  Sum_probs=123.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+ +......     ..+.....++.++.+|+++++++..+++.     ..+|+
T Consensus        12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589         12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-----DKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            7999999999999999999999999998 3321111     11111124688999999999888776653     25899


Q ss_pred             EEEcCCCCcc-c------------------------hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD-E------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~-~------------------------~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|.... .                        .+.++..++ ...++|++||...+...          .....|.
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~  155 (272)
T PRK08589         86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD----------LYRSGYN  155 (272)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC----------CCCchHH
Confidence            9999986321 0                        112333333 33689999997654211          1112334


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch---hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .+|..++.+++       ..+++++.+.||.+..+......   ...+............     ....+...+|+++++
T Consensus       156 asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~  230 (272)
T PRK08589        156 AAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-----PLGRLGKPEEVAKLV  230 (272)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-----CCCCCcCHHHHHHHH
Confidence            88988888763       35799999999998776321100   0000000000000000     011245789999999


Q ss_pred             HHHhcCc--cccCceEEecCCC
Q 024575          200 VQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +.++...  ...|+.+.+.++.
T Consensus       231 ~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        231 VFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHcCchhcCcCCCEEEECCCc
Confidence            9988653  3357788887764

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.51  E-value=7.1e-13  Score=105.78  Aligned_cols=194  Identities=14%  Similarity=0.152  Sum_probs=121.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+... ....     ..+.....++.++.+|+++++++.++++.     ..+|+
T Consensus        12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226         12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLA-----DELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987532 1111     01111124677899999999988877663     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +...++++    +.  +..++|++||.....          .+......|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~~~~~~~~Y  155 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------VADPGETAY  155 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------cCCCCcchH
Confidence            9999986211                    12223333    32  456899998864310          011112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-------chhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                       .+|...+.+.+       ..+++++.++||.+.++....       ......+..+....+         ...+...+|
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~  226 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP---------LRRLADPLE  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC---------CCCCCCHHH
Confidence             88888887763       247999999999988763110       001111222221111         112457899


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCCC
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++..++...  ...|+.+.+.++.
T Consensus       227 va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        227 VGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHcCchhcCCcCceEeECCCc
Confidence            999998887543  3457777777764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.9e-13  Score=109.79  Aligned_cols=136  Identities=18%  Similarity=0.136  Sum_probs=95.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+..... .+.          ..++.++.+|+++.+++.++++..     ++|+
T Consensus         7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVE-ALA----------AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421 111          235788999999998888776532     6899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCcccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      |||++|....                    +..+++++    ++ +..++|++||...+...          .....|..
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~~  145 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT----------PFAGAYCA  145 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC----------CCccHHHH
Confidence            9999986321                    12223333    33 44678999886543110          01122338


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCC
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~  157 (265)
                      +|...+.+.+       ..++++++++||.+..+
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            8888777642       36899999999998765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.51  E-value=2.1e-13  Score=103.30  Aligned_cols=180  Identities=17%  Similarity=0.146  Sum_probs=117.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      ||||+.+|.++++.|.+.|++|++..|+.+.. +.+..       ++. ..+..+..|++|.++++.+++.     .++|
T Consensus        12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL-~~la~-------~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221          12 TGASSGIGEATARALAEAGAKVVLAARREERL-EALAD-------EIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             ecCcchHHHHHHHHHHHCCCeEEEEeccHHHH-HHHHH-------hhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            89999999999999999999999999998873 22221       111 3588999999999886655542     2699


Q ss_pred             EEEEcCCCCc--------------------cchHH----HHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~----l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||...                    .+..+    ++..+.  +..++|.+||....          ...+....|
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----------~~y~~~~vY  153 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----------YPYPGGAVY  153 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----------ccCCCCccc
Confidence            9999999732                    22333    333333  55699999998742          011111223


Q ss_pred             ccchhhHHHHH---h----hcCCceeEeecceeeCCC-CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 HKGKLNTESVL---E----SKGVNWTSLRPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~~~k~~~E~~~---~----~~~~~~~i~r~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ..+|+.+..+.   |    ..+++++.+.||.+-.-. ..-++-         +..-.. ..-.....++..+|+|++++
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~---------g~~~~~-~~~y~~~~~l~p~dIA~~V~  223 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE---------GDDERA-DKVYKGGTALTPEDIAEAVL  223 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC---------chhhhH-HHHhccCCCCCHHHHHHHHH
Confidence            38888877664   2    357999999999874321 000000         000000 00001235677899999999


Q ss_pred             HHhcCccc
Q 024575          201 QVLGNEKA  208 (265)
Q Consensus       201 ~~~~~~~~  208 (265)
                      +++..|..
T Consensus       224 ~~~~~P~~  231 (246)
T COG4221         224 FAATQPQH  231 (246)
T ss_pred             HHHhCCCc
Confidence            99999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.50  E-value=9.3e-13  Score=104.68  Aligned_cols=195  Identities=15%  Similarity=0.176  Sum_probs=124.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.|+++.... +.    ..+.....++.++.+|+++++++.++++.     ..+|+
T Consensus        17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEA-AV----AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHH-HH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999998654211 10    11111124588999999999888776653     25799


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    +    .+.+++.+.  +..++|++||...+...          .....|.
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~~~~Y~  161 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR----------AGDAVYP  161 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC----------CCccHhH
Confidence            9999986321                    1    122234443  56789999987643111          1112233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+++       ..+++++.++||.+.++...... ...+.......  .+       ...+++++|++++++.
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~  232 (256)
T PRK06124        162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TP-------LGRWGRPEEIAGAAVF  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence            77887776653       35899999999999887421111 01111111111  11       1236789999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++.++.  ..|+.+.+.++.
T Consensus       233 l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        233 LASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HcCcccCCcCCCEEEECCCc
Confidence            997653  247777776654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.50  E-value=1.5e-12  Score=103.82  Aligned_cols=195  Identities=17%  Similarity=0.162  Sum_probs=121.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||.+++++|+++|++|+++.|+.........    ..+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998886543211111    11111124577899999999988777653     25899


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+++.....                        +..+++.+.  + ..++|++||...+           .+..+...
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~  157 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPWPLFVH  157 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCCCCCcc
Confidence            99999863210                        122334443  2 3689999986532           11122233


Q ss_pred             c-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.       ...+++++.++||.+..+.....+ ...........  .+       ...+...+|+++.+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~  228 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESM--IP-------MGYIGKPEEIAAVA  228 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhc--CC-------CCCCcCHHHHHHHH
Confidence            4 8887766654       235899999999999887432111 11111111111  11       11355689999999


Q ss_pred             HHHhcCc--cccCceEEecCCC
Q 024575          200 VQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      .+++...  ...|..+.+.++.
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHcCcccCCccCcEEEECCCc
Confidence            9988653  2356667776654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.50  E-value=1.1e-12  Score=103.06  Aligned_cols=193  Identities=15%  Similarity=0.157  Sum_probs=119.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.+++++|+++|++|+++.|......+...    ..+.....++.++.+|+++.+++.++++.     ..+|.
T Consensus         4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVV----SAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999886543221111    11111134688999999999888776653     25799


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC-----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~-----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|...                    .+..++++++     +  +..++|++||...+....          ....|
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y  149 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR----------GQVNY  149 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------CCcch
Confidence            999988521                    1122344432     2  446899999865431110          11123


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+.+       ..+++++.++||.+.++.... ... ........-++         ..+...+|+++++.+
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~~---------~~~~~~~~va~~~~~  218 (239)
T TIGR01831       150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEH-DLDEALKTVPM---------NRMGQPAEVASLAGF  218 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhH-HHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            378887766542       358999999999988764211 111 11111111111         123457999999999


Q ss_pred             HhcCcc--ccCceEEecCC
Q 024575          202 VLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~  218 (265)
                      ++..+.  ..|....+.++
T Consensus       219 l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       219 LMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HcCchhcCccCCEEEecCC
Confidence            987542  35666666654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.50  E-value=1.1e-12  Score=103.95  Aligned_cols=195  Identities=15%  Similarity=0.166  Sum_probs=121.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.+|+++++.|+++|++|++++|+...... ..    ..+.....++.++.+|++|++++.+++.+     ..+|+
T Consensus         7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEE-AK----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998654211 10    11111124688999999999888876653     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC-----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~-----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                    +..++++++     +  ...++|++||...+..          ......|
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~----------~~~~~~Y  151 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA----------GPGVIHS  151 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC----------CCCCcch
Confidence            9999985211                    122233332     2  2357999998754211          1111223


Q ss_pred             ccchhhHHHHHh--------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 HKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~~~k~~~E~~~~--------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..+|...+.+.+        +.|++++.++||.+.+.......  .......+.+..++         .-+...+|++++
T Consensus       152 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  222 (252)
T PRK07677        152 AAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAGL  222 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHHH
Confidence            478888777653        24899999999998754211111  11122222221111         124568999999


Q ss_pred             HHHHhcCc--cccCceEEecCCC
Q 024575          199 FVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +..++...  ...|+.+.+.++.
T Consensus       223 ~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        223 AYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHcCccccccCCCEEEECCCe
Confidence            98887653  2457777777764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2e-12  Score=103.12  Aligned_cols=193  Identities=13%  Similarity=0.135  Sum_probs=121.0

Q ss_pred             CCccc-cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-h-hccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||+| .||+++++.|+++|++|++++|+..+.....     ..+.. . ..++.++++|+++++++.++++.     ..
T Consensus        23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETA-----DELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            79997 6999999999999999999988765421111     00111 1 13578899999999888877753     26


Q ss_pred             ccEEEEcCCCCcc--------------------chHHH----HHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           73 FDVVYDINGREAD--------------------EVEPI----LDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~~~l----~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|++||++|....                    +...+    +..+.  . ..++|++||...+.           +..+
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~  166 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----------AQHG  166 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CCCC
Confidence            8999999986311                    11112    22232  2 45788888765321           1112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...| .+|...+.+.+       ..+++++.++||.+..|..................++         .-+...+|+++
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~  237 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVAN  237 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            2334 89999888763       3589999999999988742211111222222222111         12445799999


Q ss_pred             HHHHHhcCcc--ccCceEEecCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +++.++....  ..|+.+.+.++
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCC
Confidence            9999887542  35667766654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.49  E-value=8.7e-13  Score=105.11  Aligned_cols=196  Identities=14%  Similarity=0.128  Sum_probs=120.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh-hhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||++++++|++.|++|+++.|+.........    ..+. .....+.++.+|++|++++.+++..     .++|
T Consensus        14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            7999999999999999999999988765433111111    0111 0123678999999999988877764     2689


Q ss_pred             EEEEcCCCCc---------------cc---------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCC
Q 024575           75 VVYDINGREA---------------DE---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        75 ~vi~~a~~~~---------------~~---------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                      ++||+|+...               ..               ++.++..++  +..++|++||...+..          .
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~  159 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY----------I  159 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC----------C
Confidence            9999997421               00               122333344  4468999998653210          0


Q ss_pred             CCccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       123 ~~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      +....|..+|..++.+++       ..+++++.+.||.+-.+...... ............+         ..-+...+|
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~~  230 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP---------LNRMGQPED  230 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC---------CCCCCCHHH
Confidence            111234489999888763       35899999999987655210000 0011111111111         112456899


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++++.++....  ..|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            9999999886532  357777777654

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.48  E-value=7.1e-13  Score=105.12  Aligned_cols=172  Identities=18%  Similarity=0.137  Sum_probs=112.7

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~----~~~d   74 (265)
                      |||+|++|++++++|+++| ++|++++|+++...+.+.    ..+... ..+++++.+|++|.+++.++++.    .++|
T Consensus        14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~----~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id   89 (253)
T PRK07904         14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAV----AQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVD   89 (253)
T ss_pred             EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHH----HHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCC
Confidence            7999999999999999995 999999998765111111    111111 13688999999998876554432    3799


Q ss_pred             EEEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||++|.....                        .+.+++.++  +..++|++||...+..          ......|
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~----------~~~~~~Y  159 (253)
T PRK07904         90 VAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV----------RRSNFVY  159 (253)
T ss_pred             EEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC----------CCCCcch
Confidence            999998763110                        123445554  5689999999764211          0111123


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|.....+.       +..++++++++||.+..+..         .   .....         ...+..+|+|+.++.
T Consensus       160 ~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~---------~---~~~~~---------~~~~~~~~~A~~i~~  218 (253)
T PRK07904        160 GSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS---------A---HAKEA---------PLTVDKEDVAKLAVT  218 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh---------c---cCCCC---------CCCCCHHHHHHHHHH
Confidence            37887766442       45689999999999877521         0   00000         123578999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      .++++.
T Consensus       219 ~~~~~~  224 (253)
T PRK07904        219 AVAKGK  224 (253)
T ss_pred             HHHcCC
Confidence            998764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=3.9e-13  Score=105.67  Aligned_cols=187  Identities=16%  Similarity=0.237  Sum_probs=117.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|+++++.|+++|++|++++|++.... .+.    ..... ..++.++.+|+++.+++.++++.     ..+|.
T Consensus        11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786         11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLK-RMK----KTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----HHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421 110    00010 13678899999999888776653     14799


Q ss_pred             EEEcCCCCcc------------------c----hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cch
Q 024575           76 VYDINGREAD------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (265)
Q Consensus        76 vi~~a~~~~~------------------~----~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k  132 (265)
                      +||+++....                  .    ...++..++...++|++||......          +..+...| .+|
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~~~~~~Y~~sK  154 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------ASPDQLSYAVAK  154 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------CCCCchHHHHHH
Confidence            9999875321                  1    1122222333457898888653110          11122234 888


Q ss_pred             hhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          133 LNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       133 ~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      ...+.++       ...+++++++||++++++.....    ....      ...     ....++..+|+++++.+++..
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~~------~~~-----~~~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWKK------LRK-----LGDDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhhh------hcc-----ccCCCCCHHHHHHHHHHHhcc
Confidence            8777654       23589999999999998742110    0000      000     011346679999999999865


Q ss_pred             cc--ccCceEEecCC
Q 024575          206 EK--ASRQVFNISGE  218 (265)
Q Consensus       206 ~~--~~~~~~~i~~~  218 (265)
                      +.  ..|+.+.+.++
T Consensus       220 ~~~~~~g~~~~~~~~  234 (238)
T PRK05786        220 EADWVDGVVIPVDGG  234 (238)
T ss_pred             cccCccCCEEEECCc
Confidence            43  24666666554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.48  E-value=1.3e-12  Score=104.35  Aligned_cols=187  Identities=17%  Similarity=0.149  Sum_probs=119.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|++....              ..++.++.+|+++++++.++++.     ..+|+
T Consensus        15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998875521              14677899999999988877663     26899


Q ss_pred             EEEcCCCCcc-----------------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCC
Q 024575           76 VYDINGREAD-----------------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (265)
Q Consensus        76 vi~~a~~~~~-----------------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~  120 (265)
                      +||++|....                             +...++++    +.  +..++|++||...+...        
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  152 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS--------  152 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC--------
Confidence            9999985311                             11223333    22  34579999987654211        


Q ss_pred             CCCCccccc-cchhhHHHHHh-------hcCCceeEeecceee-CCCCCCchh-----------HHHHHHHHcCCcccCC
Q 024575          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVE-----------EWFFHRLKAGRPIPIP  180 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~-g~~~~~~~~-----------~~~~~~~~~~~~~~~~  180 (265)
                         .....| .+|...+.+++       ..++++++++||.+. .+.......           ..+..........+  
T Consensus       153 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  227 (266)
T PRK06171        153 ---EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP--  227 (266)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc--
Confidence               112334 88888887753       358999999999875 221110000           00000111000111  


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          181 GSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                           ...+...+|+|+++..++....  ..|+.+.+.++.
T Consensus       228 -----~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        228 -----LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             -----CCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence                 1234567999999999886532  357777777653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.48  E-value=1.5e-13  Score=106.96  Aligned_cols=178  Identities=19%  Similarity=0.182  Sum_probs=119.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      ||||+.||..++++|+++|++|+++.|+.++..+ +.+    ++... .-.++++.+|+++++++..+...     ..+|
T Consensus        12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~-la~----~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id   86 (265)
T COG0300          12 TGASSGIGAELAKQLARRGYNLILVARREDKLEA-LAK----ELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID   86 (265)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHH----HHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence            8999999999999999999999999999887322 211    11111 23578999999999888776642     2699


Q ss_pred             EEEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....+                        +..++..+.  +..++|.++|...+-..          +.-..|
T Consensus        87 vLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~----------p~~avY  156 (265)
T COG0300          87 VLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT----------PYMAVY  156 (265)
T ss_pred             EEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------cchHHH
Confidence            999999984321                        222222322  56789999998875211          111223


Q ss_pred             ccchhhHHHH-------HhhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~-------~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      +.+|...-.+       ++..|++++.+.||.+...+         .. . .+.....   ......++..+|+|+..+.
T Consensus       157 ~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f---------~~-~-~~~~~~~---~~~~~~~~~~~~va~~~~~  222 (265)
T COG0300         157 SATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEF---------FD-A-KGSDVYL---LSPGELVLSPEDVAEAALK  222 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccc---------cc-c-ccccccc---ccchhhccCHHHHHHHHHH
Confidence            4778665443       25678999999999876653         11 0 1111110   0123467889999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      .+++.+
T Consensus       223 ~l~~~k  228 (265)
T COG0300         223 ALEKGK  228 (265)
T ss_pred             HHhcCC
Confidence            998865

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.47  E-value=7.7e-13  Score=104.33  Aligned_cols=172  Identities=15%  Similarity=0.155  Sum_probs=114.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh-hhhccceEEEecCCChHHHHHHhhc--cCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~--~~~d~vi   77 (265)
                      |||+|++|.++++.|+++|++|++++|+++.......     .+. ....++.++.+|+++++++.++++.  ..+|++|
T Consensus         7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          7 IGATSDIARACARRYAAAGARLYLAARDVERLERLAD-----DLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            7999999999999999999999999998755221110     000 1124788999999999988877763  2579999


Q ss_pred             EcCCCCc--------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           78 DINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        78 ~~a~~~~--------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      |++|...                    .+...++++    ++  +..++|++||......          ......|..+
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~Y~~s  151 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------RASNYVYGSA  151 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------CCCCcccHHH
Confidence            9987521                    112223333    32  5678999998653211          1111234488


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      |...+.+.+       ..++++++++|+.+.++..         .    .  ...+     ...+...+|+++.++..++
T Consensus       152 K~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~---------~----~--~~~~-----~~~~~~~~~~a~~i~~~~~  211 (243)
T PRK07102        152 KAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT---------A----G--LKLP-----GPLTAQPEEVAKDIFRAIE  211 (243)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh---------h----c--cCCC-----ccccCCHHHHHHHHHHHHh
Confidence            887776652       4589999999999887621         0    0  0111     1134568999999999988


Q ss_pred             Ccc
Q 024575          205 NEK  207 (265)
Q Consensus       205 ~~~  207 (265)
                      ++.
T Consensus       212 ~~~  214 (243)
T PRK07102        212 KGK  214 (243)
T ss_pred             CCC
Confidence            653

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.47  E-value=3.6e-13  Score=107.29  Aligned_cols=177  Identities=18%  Similarity=0.140  Sum_probs=112.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||||++|++++++|+++|++|++++|+.+.... +..    ...  ...+.++.+|+++.+++.+++..      .++|
T Consensus         7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~----~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAA----ELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHH----Hhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            7999999999999999999999999998765211 100    000  24688999999999888776652      2679


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|||++|....                    +..+++++    ++  +..++|++||.......          .....|
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y  149 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ----------PGLAVY  149 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC----------CCchhh
Confidence            99999986321                    12223333    33  45789999986542111          011223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+.+       ..++++++++||.+..+..... ........     .      ......+..+|++++++.
T Consensus       150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~-----~------~~~~~~~~~~~va~~~~~  217 (260)
T PRK08267        150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT-SNEVDAGS-----T------KRLGVRLTPEDVAEAVWA  217 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc-cchhhhhh-----H------hhccCCCCHHHHHHHHHH
Confidence            388888777653       3579999999998866531110 00000000     0      001113457999999999


Q ss_pred             HhcCc
Q 024575          202 VLGNE  206 (265)
Q Consensus       202 ~~~~~  206 (265)
                      +++.+
T Consensus       218 ~~~~~  222 (260)
T PRK08267        218 AVQHP  222 (260)
T ss_pred             HHhCC
Confidence            98754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.47  E-value=2.9e-12  Score=101.63  Aligned_cols=192  Identities=15%  Similarity=0.119  Sum_probs=120.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||++++++|+++|++|+++++......       ...+......+..+++|++|.+++.+++++     ..+|+
T Consensus        16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTET-------IEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEecCcchHHH-------HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999998876543210       011111124678899999999988887764     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC-C--CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~-~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                    +..+++++    +. .  ..++|++||...+.....          -..|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y  158 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----------VPSY  158 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----------Ccch
Confidence            9999986311                    12223333    22 2  357999999876532111          0123


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ..+|...+.+.+       ..+++++.++||.+-.+...... .........+  .++.       .-+...+|+++.++
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~p~eva~~~~  229 (253)
T PRK08993        159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGLPSDLMGPVV  229 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcCHHHHHHHHH
Confidence            388988887753       35899999999998776321000 0000111111  1110       12556899999999


Q ss_pred             HHhcCcc--ccCceEEecCC
Q 024575          201 QVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~  218 (265)
                      .++.+..  ..|+.+.+.++
T Consensus       230 ~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        230 FLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHhCccccCccCcEEEECCC
Confidence            9987542  35667777664

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.47  E-value=4.9e-13  Score=106.76  Aligned_cols=195  Identities=17%  Similarity=0.236  Sum_probs=121.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.+++++|+++|++|++++|+++.... ..    ..+.....++.++.+|+++++++.+++++     .++|+
T Consensus        15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDA-AV----AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654211 10    11111124567889999999988877764     25899


Q ss_pred             EEEcCCCC--------------------ccchHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGRE--------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~--------------------~~~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+++..                    ..+..+++++    ++ ...+++++||...+.           +......| 
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------~~~~~~~Y~  158 (264)
T PRK07576         90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------PMPMQAHVC  158 (264)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------CCCCccHHH
Confidence            99998742                    1122233333    22 335899999875431           11112234 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+++       ..+++++.++||.+.+......... ........ ...+       ...+...+|+++.++.
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~dva~~~~~  230 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA-QSVP-------LKRNGTKQDIANAALF  230 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH-hcCC-------CCCCCCHHHHHHHHHH
Confidence            88988888764       2578999999998765321000000 00000000 1111       1234568999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++..+.  ..|+.+.+.++.
T Consensus       231 l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        231 LASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HcChhhcCccCCEEEECCCc
Confidence            997542  357777777764

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.46  E-value=3.2e-12  Score=101.80  Aligned_cols=195  Identities=13%  Similarity=0.155  Sum_probs=124.9

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||+.++++|+++|++ |++++|++.......     ..+......+.++.+|+++++++.++++.     .++|
T Consensus        12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198         12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999998 999998755421100     01111124577899999999988877753     2689


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||+++....                    +..+++++    +.   ...++|++||...++...          ....
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------~~~~  156 (260)
T PRK06198         87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----------FLAA  156 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC----------Ccch
Confidence            99999986321                    12233333    22   235799999987754211          1122


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCC---c---hhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---P---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      |..+|...|.+.+       ..+++++.++||+++++....   .   ....+........         ....+++.+|
T Consensus       157 Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  227 (260)
T PRK06198        157 YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPDE  227 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHHH
Confidence            4488998888764       346899999999998874210   0   0011111111110         1234678999


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++++++++....  ..|+.+.+.++.
T Consensus       228 ~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        228 VARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHHcChhhCCccCceEeECCcc
Confidence            9999999886543  357788887654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.46  E-value=1.6e-12  Score=113.81  Aligned_cols=191  Identities=17%  Similarity=0.239  Sum_probs=124.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||.+++++|+++|++|+++.|++.... .+.       ......+..+.+|++|++++.++++.     ..+|+
T Consensus       275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK-KLA-------EALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-------HHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421 111       11124567789999999988877753     25899


Q ss_pred             EEEcCCCCcc---------------------chHHHH----HhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD---------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                     +...++    ..+++..++|++||...+..           ..+...| 
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  415 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----------LPPRNAYC  415 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----------CCCCchhH
Confidence            9999986311                     111222    23334468999999775421           1122334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|...+.+.+       ..+++++.++||.+..+......  .........+..++         ..+...+|+|++++
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~  486 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIA  486 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            88998887763       35799999999999876421100  00011111111111         12456899999999


Q ss_pred             HHhcCc--cccCceEEecCCC
Q 024575          201 QVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (265)
                      .++...  ...|+.+.+.++.
T Consensus       487 ~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        487 FLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHhCccccCccCcEEEECCCc
Confidence            988653  2467888888764

>TIGR02415 23BDH acetoin reductases

Probab=99.46  E-value=3e-12  Score=101.63  Aligned_cols=198  Identities=20%  Similarity=0.194  Sum_probs=120.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.+++++|++.|++|+++.|++.......     ..+......+.++.+|++|++++.+++..     ..+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998754311110     11111124578899999999988877653     15899


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+++....                    ..    ..++..++   ...++|++||.......           ...+.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----------PILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----------CCCcc
Confidence            9999986321                    01    12233333   23689999986543111           11223


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccC------CCCCCceeeeeeHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI------PGSGIQVTQLGHVKD  194 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~D  194 (265)
                      | .+|...+.+.+       ..++++++++||.+..+..     ..+.....+......      +........+..++|
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW-----EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPED  224 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh-----hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHH
Confidence            4 88988887763       2479999999998866531     111100000000000      000001123677899


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++++..++..+.  ..|..+.+.++.
T Consensus       225 ~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       225 VAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             HHHHHHhhcccccCCccCcEEEecCCc
Confidence            9999999998653  246666666653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.46  E-value=7.4e-13  Score=107.20  Aligned_cols=174  Identities=15%  Similarity=0.174  Sum_probs=114.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.++++.|+++|++|++++|+.+... .+.    ..+......+.++.+|++|.+++.++++.     ..+|+
T Consensus        46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~-~~~----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         46 TGASSGIGEAAAEQFARRGATVVAVARREDLLD-AVA----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421 111    11111124577899999999988877762     27899


Q ss_pred             EEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||++|....                      +    ++.++..++  +..++|++||.+++...         ......
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~p~~~~  191 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA---------SPLFSV  191 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC---------CCCcch
Confidence            9999986311                      0    112222333  55799999997654210         011122


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      |..+|...+.+++       ..++++++++||.+-.+...         .   ...  .  .   ....+..+++|+.++
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~---------~---~~~--~--~---~~~~~~pe~vA~~~~  252 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA---------P---TKA--Y--D---GLPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc---------c---ccc--c--c---CCCCCCHHHHHHHHH
Confidence            4488998887653       35899999999977655210         0   000  0  0   112357899999999


Q ss_pred             HHhcCcc
Q 024575          201 QVLGNEK  207 (265)
Q Consensus       201 ~~~~~~~  207 (265)
                      ..++++.
T Consensus       253 ~~~~~~~  259 (293)
T PRK05866        253 TAARTRP  259 (293)
T ss_pred             HHHhcCC
Confidence            9998653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.46  E-value=1.3e-12  Score=104.12  Aligned_cols=194  Identities=19%  Similarity=0.227  Sum_probs=122.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||++++++|+++|++|++++|++.......     .++.. ..++.++.+|++|.+++.++++.     ..+|+
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKAL-----KELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421111     01111 13678899999999988877753     26899


Q ss_pred             EEEcCCCCcc------c--------------------hHHHHHh-CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREAD------E--------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~~------~--------------------~~~l~~~-~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +||++|....      .                    +..++.. ++  +..++|++||.....           +..+.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  148 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE-----------PMPPL  148 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------CCCCc
Confidence            9999985210      0                    1112222 22  346899999976531           11112


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh----------HH-HHHHHHcCCcccCCCCCCcee
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EW-FFHRLKAGRPIPIPGSGIQVT  187 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~  187 (265)
                      ..| .+|...+.+.+       ..+++++.+.||.+-.+.....+.          .. .......  ..+       ..
T Consensus       149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------~~  219 (259)
T PRK08340        149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE--RTP-------LK  219 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc--cCC-------cc
Confidence            234 78888877753       357999999999887663110000          00 0000000  000       11


Q ss_pred             eeeeHHHHHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      -+...+|+|++++.++...  ...|+...+.++..
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            2456899999999988754  34677777777643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=6.3e-12  Score=99.93  Aligned_cols=195  Identities=15%  Similarity=0.105  Sum_probs=121.0

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCC--CC----ChhHHhhhhccceEEEecCCChHHHHHHhhc--
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   70 (265)
                      |||||  .+|.+++++|+++|++|++++|++........  ..    ....+......+.++.+|+++.+++..+++.  
T Consensus        11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   90 (256)
T PRK12748         11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS   90 (256)
T ss_pred             eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            79985  79999999999999999999997432110000  00    0011111124688999999999888776653  


Q ss_pred             ---cCccEEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCC
Q 024575           71 ---KGFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        71 ---~~~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                         ..+|+|||+++....                    +...++++    +.  ...++|++||...+...         
T Consensus        91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------  161 (256)
T PRK12748         91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM---------  161 (256)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC---------
Confidence               268999999986311                    12223333    22  34689999997664321         


Q ss_pred             CCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                        .....| .+|...+.+++       ..+++++.++||.+..+.....    .........    +.     ..+...+
T Consensus       162 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~----~~~~~~~~~----~~-----~~~~~~~  226 (256)
T PRK12748        162 --PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE----LKHHLVPKF----PQ-----GRVGEPV  226 (256)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh----HHHhhhccC----CC-----CCCcCHH
Confidence              112234 89999998763       2589999999998766532111    111111110    00     1234479


Q ss_pred             HHHHHHHHHhcCc--cccCceEEecCCC
Q 024575          194 DLARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      |+++.+..++...  ...++.+++.++.
T Consensus       227 ~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        227 DAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHHhCcccccccCCEEEecCCc
Confidence            9999999887653  2357788887653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1e-12  Score=104.18  Aligned_cols=188  Identities=14%  Similarity=0.116  Sum_probs=115.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc---------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------   71 (265)
                      |||+|++|++++++|+++|++|++++|++.+....+.+       ....+++++.+|+++.+++.+++++.         
T Consensus         7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE-------QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh-------ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            79999999999999999999999999986432211111       11256889999999998888777531         


Q ss_pred             CccEEEEcCCCCc---------------------cc----hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           72 GFDVVYDINGREA---------------------DE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~----~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                      +...+||++|...                     .+    .+.++..++   ..+++|++||...+.           +.
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  148 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------PY  148 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------CC
Confidence            1227888877521                     11    233444443   235899999876531           22


Q ss_pred             Cccccc-cchhhHHHHHh---------hcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceee
Q 024575          124 DPKSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (265)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (265)
                      .+...| .+|...+.+++         ..+++++.++||.+-.+....     ............     ..    ....
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~  219 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFIT-----LK----EEGK  219 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHH-----Hh----hcCC
Confidence            223334 88998888763         246899999999876542100     000000000000     00    0112


Q ss_pred             eeeHHHHHHHHHHHhcC-ccccCceEEe
Q 024575          189 LGHVKDLARAFVQVLGN-EKASRQVFNI  215 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~-~~~~~~~~~i  215 (265)
                      +...+|+|+.++.++.+ ....|+.+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            56789999999999876 3334555544

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.45  E-value=4.6e-12  Score=103.35  Aligned_cols=153  Identities=15%  Similarity=0.083  Sum_probs=99.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+.++.....     ..+...  ...+.++.+|++|.+++.+++++     .++
T Consensus        22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAA-----ARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            799999999999999999999999999865422111     011110  13578899999999988877653     258


Q ss_pred             cEEEEcCCCCcc------------------c----hHHHHHhCC--CCCcEEEEecceeee--cCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYL--KSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~--~~~~~~~~e~~~~~~~~  127 (265)
                      |++||+||....                  +    +..+++.++  +..++|++||...+.  ...........+..+..
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  176 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA  176 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence            999999985210                  1    344566665  457999999986542  11111111111223334


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeE--eecceeeCCC
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTS--LRPVYIYGPL  158 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i--~r~~~i~g~~  158 (265)
                      .| .+|...+.+.+       ..++++++  +.||.+..+.
T Consensus       177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            45 89988887763       24555554  4699887663

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.45  E-value=2.1e-12  Score=103.08  Aligned_cols=192  Identities=17%  Similarity=0.182  Sum_probs=121.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|++.|++|++++|++.... .+.       .....++.++.+|+++.+++.++++.     ..+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200         12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLA-SLR-------QRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-------HHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421 111       11124578899999999888777653     26899


Q ss_pred             EEEcCCCCcc-------------------------ch----HHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           76 VYDINGREAD-------------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        76 vi~~a~~~~~-------------------------~~----~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +||++|....                         +.    +.++..++ ...++|++||...+....          ..
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~  153 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG----------GG  153 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------CC
Confidence            9999985310                         01    11222233 335799999877642111          11


Q ss_pred             cccccchhhHHHHHhh------cCCceeEeecceeeCCCCCCc-h---------hHHHHHHHHcCCcccCCCCCCceeee
Q 024575          126 KSRHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-V---------EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~~------~~~~~~i~r~~~i~g~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      ..|..+|...+.+.+.      .+++++.+.||.+..+..... +         ...........  .       ...-+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~  224 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--T-------PLQFA  224 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--C-------CCCCC
Confidence            1244899988887631      358999999999876531100 0         00000111100  1       11235


Q ss_pred             eeHHHHHHHHHHHhcCc-c--ccCceEEecCCC
Q 024575          190 GHVKDLARAFVQVLGNE-K--ASRQVFNISGEK  219 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~-~--~~~~~~~i~~~~  219 (265)
                      ...+|++++++.++... .  ..|+.+.+.++.
T Consensus       225 ~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        225 PQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            56899999999988644 2  357788887764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.4e-12  Score=107.13  Aligned_cols=179  Identities=17%  Similarity=0.214  Sum_probs=115.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||||.||++++++|+++|++|++++|+++...+..     ..+......+.++.+|++|.+++.++++.     ..+|+
T Consensus        13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139         13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVA-----EECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865521111     11111124577889999999988877643     26899


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +.    ..++..++  +..++|++||...+...          +....|.
T Consensus        88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~----------p~~~~Y~  157 (330)
T PRK06139         88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ----------PYAAAYS  157 (330)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC----------CCchhHH
Confidence            9999986321                    11    12223333  44689999987654211          1112244


Q ss_pred             cchhhHHHHHh-------h-cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+.+       . .+++++.+.||.+.+|......      .. .+...      .....+.+.+|+|++++.
T Consensus       158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~~-~~~~~------~~~~~~~~pe~vA~~il~  224 (330)
T PRK06139        158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------NY-TGRRL------TPPPPVYDPRRVAKAVVR  224 (330)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------cc-ccccc------cCCCCCCCHHHHHHHHHH
Confidence            88887655432       2 3799999999999887421100      00 01100      011245689999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      ++++++
T Consensus       225 ~~~~~~  230 (330)
T PRK06139        225 LADRPR  230 (330)
T ss_pred             HHhCCC
Confidence            998765

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.45  E-value=8.7e-13  Score=117.84  Aligned_cols=203  Identities=16%  Similarity=0.173  Sum_probs=124.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh--hhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+...... ..    ..+..  ....+..+.+|++|.+++.++++..     ++
T Consensus       420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~-~~----~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEA-VA----AEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HH----HHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998654211 10    01110  0135678999999999988877642     68


Q ss_pred             cEEEEcCCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           74 DVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |++||+||.....                        .+.++..++  + ..++|++||...+...          ....
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~----------~~~~  564 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG----------KNAS  564 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC----------CCCH
Confidence            9999999963211                        112233333  2 3579999986543111          1112


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceee-CCCCCCchhHHHHHHHH-cCC---c-ccCCCCCCceeeeeeHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLK-AGR---P-IPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~-g~~~~~~~~~~~~~~~~-~~~---~-~~~~~~~~~~~~~i~~~  193 (265)
                      .|..+|...+.+++       ..+++++.++|+.++ +.+......  ...... .+.   . ...+........+++.+
T Consensus       565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe  642 (676)
T TIGR02632       565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEW--REERAAAYGIPADELEEHYAKRTLLKRHIFPA  642 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccc--hhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence            33489999888764       247999999999887 322111000  000000 000   0 00001111223467889


Q ss_pred             HHHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          194 DLARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      |+|+++..++...  ...|..+++.++..
T Consensus       643 DVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       643 DIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            9999999988643  33578899888754

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.2e-12  Score=103.26  Aligned_cols=136  Identities=15%  Similarity=0.125  Sum_probs=97.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---------c
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---------~   71 (265)
                      |||||+||++++++|+++|++|++++|+..+....          ....++.++.+|+.+.+++.+++.+         .
T Consensus         7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAA----------AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhh----------ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            79999999999999999999999999986542100          0124688899999999988875542         2


Q ss_pred             CccEEEEcCCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      .+|++||+++....                     +    ...+++.+.  +..++|++||...+.           +..
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  145 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-----------AYA  145 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC-----------CCC
Confidence            58999999886321                     1    223444444  457999999977642           112


Q ss_pred             ccccc-cchhhHHHHHh------hcCCceeEeecceeeCC
Q 024575          125 PKSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~------~~~~~~~i~r~~~i~g~  157 (265)
                      +...| .+|...|.+++      ..+++++.++||.+-.+
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            23334 88999998874      24799999999987554

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3.6e-12  Score=101.81  Aligned_cols=197  Identities=19%  Similarity=0.211  Sum_probs=121.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|+||++++++|+++|++|++++|++++.....     ..+...  ..++..+.+|++|.+++.++++.     ..+
T Consensus        14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062         14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAE-----ARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999875522111     011111  13577899999999988776653     258


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||++|....                        .++.++..++  +..++|++||...+...          .....
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~  158 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE----------PHMVA  158 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC----------CCchH
Confidence            999999986311                        0223344444  45689999997653211          11112


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh---------HHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                      |..+|...+.+.+       ..+++++.++||.+..+.....+.         ............++       ..-+..
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~  231 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGR  231 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCC
Confidence            3367777665542       468999999999987663111000         00000000001111       113556


Q ss_pred             HHHHHHHHHHHhcCc--cccCceEEecCCC
Q 024575          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      .+|++++++.++...  ...|+.+.+.++.
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            899999999988643  3467788887763

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.6e-12  Score=103.10  Aligned_cols=180  Identities=16%  Similarity=0.175  Sum_probs=113.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCC--ChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|++|++++++|+++|++|++++|+...........  ....+.....++.++.+|+++++++.++++..     ++
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   91 (273)
T PRK08278         12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGI   91 (273)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865421111000  00111122246788999999999888877642     78


Q ss_pred             cEEEEcCCCCc--------------------cchHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||++|...                    .+..++++++    +  +..+++++||.....         .....+..
T Consensus        92 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------~~~~~~~~  162 (273)
T PRK08278         92 DICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------PKWFAPHT  162 (273)
T ss_pred             CEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------ccccCCcc
Confidence            99999998631                    1233344443    2  345788888753210         00012233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecce-eeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      .| .+|..+|.+++       ..+++++.+.|+. +-.+         .......+..        ....+...+|+++.
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~---------~~~~~~~~~~--------~~~~~~~p~~va~~  225 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA---------AVRNLLGGDE--------AMRRSRTPEIMADA  225 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH---------HHHhcccccc--------cccccCCHHHHHHH
Confidence            44 99999998763       3579999999984 3222         1111111110        11235678999999


Q ss_pred             HHHHhcCc
Q 024575          199 FVQVLGNE  206 (265)
Q Consensus       199 ~~~~~~~~  206 (265)
                      ++.++...
T Consensus       226 ~~~l~~~~  233 (273)
T PRK08278        226 AYEILSRP  233 (273)
T ss_pred             HHHHhcCc
Confidence            99988764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.9e-12  Score=101.35  Aligned_cols=171  Identities=18%  Similarity=0.207  Sum_probs=113.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|++|++++++|+++|++|++++|++..... +.    ..+...  ...+.++.+|+++.+++.++++.     .++
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEE-LK----AELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----HHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998654211 10    001110  23678899999999888776653     268


Q ss_pred             cEEEEcCCCCcc--------------------chHHHH----HhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~----~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||++|....                    +..+++    +.++  +..++|++||......          .+.+..
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~  152 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG----------LPGVKA  152 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC----------CCCCcc
Confidence            999999985321                    112222    3333  5678999998664311          111223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+.+       ..+++++.++||++.++..         ..   .+.         ....++.+|.++.+
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~---------~~---~~~---------~~~~~~~~~~a~~i  211 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN---------AK---AKS---------TPFMVDTETGVKAL  211 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh---------hc---ccc---------CCccCCHHHHHHHH
Confidence            34 88988877652       2478999999998876521         00   000         11246789999999


Q ss_pred             HHHhcCcc
Q 024575          200 VQVLGNEK  207 (265)
Q Consensus       200 ~~~~~~~~  207 (265)
                      +..++...
T Consensus       212 ~~~~~~~~  219 (248)
T PRK08251        212 VKAIEKEP  219 (248)
T ss_pred             HHHHhcCC
Confidence            99998654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=1.2e-11  Score=97.98  Aligned_cols=191  Identities=9%  Similarity=0.028  Sum_probs=119.3

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+  +.||++++++|+++|++|++..|+... ...+.+     +.  ...+.++++|++|++++.++++.     ..+
T Consensus        13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~~-----~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079         13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQK-----LV--DEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHHh-----hc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            7998  799999999999999999999887321 111111     00  13578899999999888776653     258


Q ss_pred             cEEEEcCCCCcc------------------------c----hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||++|....                        +    ++.++..++...++|++||......          .+..
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~----------~~~~  154 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA----------IPNY  154 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc----------CCcc
Confidence            999999985310                        0    1222333443468999998653210          0111


Q ss_pred             cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ..|..+|...+.+.+       ..|++++.+.||.+-.+...... ...........  .+       ...+...+|+++
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedva~  225 (252)
T PRK06079        155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSR--TV-------DGVGVTIEEVGN  225 (252)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhc--Cc-------ccCCCCHHHHHH
Confidence            223388988888763       36899999999998766321100 11111111111  11       112556899999


Q ss_pred             HHHHHhcCc--cccCceEEecCC
Q 024575          198 AFVQVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~  218 (265)
                      ++..++...  ...|+.+.+.++
T Consensus       226 ~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        226 TAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHhCcccccccccEEEeCCc
Confidence            999998653  235677777665

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.8e-12  Score=105.25  Aligned_cols=184  Identities=22%  Similarity=0.251  Sum_probs=115.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||.++++.|.++|++|++++|+.........     .+.. ...+..+.+|++|.+++.+++++     ..+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-----~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAA-----ELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211100     0000 13455667999999988777653     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCcccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      +||++|....                    +..+++++    +. ...++|++||...+....          ....|..
T Consensus        89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~a  158 (296)
T PRK05872         89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP----------GMAAYCA  158 (296)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC----------CchHHHH
Confidence            9999996321                    12222332    22 346899999977642211          1122338


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      +|..++.+.+       ..+++++++.||.+..+........ .........  ++.     ....++..+|+++++..+
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~--~~~-----p~~~~~~~~~va~~i~~~  231 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRAR--LPW-----PLRRTTSVEKCAAAFVDG  231 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhh--CCC-----cccCCCCHHHHHHHHHHH
Confidence            8988888763       4689999999998876531110000 111111111  110     112456789999999999


Q ss_pred             hcCcc
Q 024575          203 LGNEK  207 (265)
Q Consensus       203 ~~~~~  207 (265)
                      +.+..
T Consensus       232 ~~~~~  236 (296)
T PRK05872        232 IERRA  236 (296)
T ss_pred             HhcCC
Confidence            87653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.41  E-value=1.9e-12  Score=106.42  Aligned_cols=152  Identities=16%  Similarity=0.195  Sum_probs=98.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||.++++.|+++|++|++++|+..+......     .+......+.++.+|++|.+++.++++.     ..+|+
T Consensus        12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453         12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ-----ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            7999999999999999999999999998654221111     0100124688899999999988877763     24999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--C--CCcEEEEecceeeecCC-C-C--CC--C--
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSD-L-L--PH--C--  118 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~-~-~--~~--~--  118 (265)
                      +||+||....                     +    ++.++..++  +  ..++|++||...+.... + .  +.  +  
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~  166 (322)
T PRK07453         87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG  166 (322)
T ss_pred             EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence            9999985210                     1    112233333  2  35999999987653210 0 0  00  0  


Q ss_pred             ----------------CCCCCCccccc-cchhhHHHHH----hh----cCCceeEeecceeeCC
Q 024575          119 ----------------ETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGP  157 (265)
Q Consensus       119 ----------------e~~~~~~~~~~-~~k~~~E~~~----~~----~~~~~~i~r~~~i~g~  157 (265)
                                      +..+..|...| .+|...+.+.    ++    .+++++.++||++++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence                            01122344445 9998765543    22    3799999999999863

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.40  E-value=4.2e-12  Score=104.15  Aligned_cols=193  Identities=18%  Similarity=0.147  Sum_probs=118.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhcc--CccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAK--GFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--~~d~vi   77 (265)
                      +||||.+|+-+++.|+++|+.|+++.|+..+..+.+..      .....+...+..|... .+.+..+....  ...+++
T Consensus        85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~------~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~  158 (411)
T KOG1203|consen   85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV------FFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI  158 (411)
T ss_pred             ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc------cccccccceeeeccccccchhhhhhhhccccceeEE
Confidence            59999999999999999999999999998885443320      0002344445555443 34444444422  345666


Q ss_pred             EcCCCC-------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhc
Q 024575           78 DINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK  142 (265)
Q Consensus        78 ~~a~~~-------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~  142 (265)
                      -+++..             ..+++|+++||+  +++|++++|+++.-......+...    .-.....+|..+|+++++.
T Consensus       159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~----~~~~~~~~k~~~e~~~~~S  234 (411)
T KOG1203|consen  159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILL----LNGLVLKAKLKAEKFLQDS  234 (411)
T ss_pred             ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhh----hhhhhhHHHHhHHHHHHhc
Confidence            665431             235899999998  999999999877521111000000    0111237889999999999


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      +++++|||++...-+.......      ..........++  ..--.+.-.|+|+.++.++.++....+
T Consensus       235 gl~ytiIR~g~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~i~r~~vael~~~all~~~~~~~  295 (411)
T KOG1203|consen  235 GLPYTIIRPGGLEQDTGGQREV------VVDDEKELLTVD--GGAYSISRLDVAELVAKALLNEAATFK  295 (411)
T ss_pred             CCCcEEEeccccccCCCCccee------cccCcccccccc--ccceeeehhhHHHHHHHHHhhhhhccc
Confidence            9999999999765432100000      000111111111  111367789999999999988765443

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.39  E-value=8.9e-12  Score=99.23  Aligned_cols=199  Identities=11%  Similarity=0.077  Sum_probs=121.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhcc-CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~   78 (265)
                      |||+|.+|+++++.|+++|++|++++|++.+.....     ..+.. ...++.++.+|+++++++.++++.. .+|++||
T Consensus        13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   87 (259)
T PRK06125         13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA-----ADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN   87 (259)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            699999999999999999999999999865422110     01111 1235788999999999988877643 6999999


Q ss_pred             cCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cc
Q 024575           79 INGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (265)
Q Consensus        79 ~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~  131 (265)
                      ++|....                    +    ++.++..++  +..++|++||....           .+......| .+
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~y~as  156 (259)
T PRK06125         88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYICGSAG  156 (259)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchHhHHH
Confidence            9986321                    1    122333333  34579998876431           111112223 77


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHc---CCc--ccCCCCCCceeeeeeHHHHHHHH
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRP--IPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      |...+.+.+       ..+++++.+.||.+..+..     ..+......   +..  ...........-+...+|+++++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRM-----LTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHH-----HHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence            888776653       3589999999998876521     111100000   000  00000000011356789999999


Q ss_pred             HHHhcCc--cccCceEEecCCCc
Q 024575          200 VQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      +.++...  ...|..+.+.++..
T Consensus       232 ~~l~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        232 AFLASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             HHHcCchhccccCceEEecCCee
Confidence            9988643  23677888877643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.38  E-value=6.8e-12  Score=100.06  Aligned_cols=192  Identities=16%  Similarity=0.201  Sum_probs=118.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+..... .+..       .....+..+.+|+.+.+++.++++.     ..+|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~l~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325        11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ-ELEA-------AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHh-------hcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999765421 1110       0123578899999998887776653     26899


Q ss_pred             EEEcCCCCc--------c-----------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           76 VYDINGREA--------D-----------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        76 vi~~a~~~~--------~-----------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +||++|...        .                 +...++++    +. ...++|++||...+..           ...
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~  151 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-----------NGG  151 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC-----------CCC
Confidence            999998521        0                 01122333    22 2357888887654311           111


Q ss_pred             c-ccccchhhHHHHHh----h--cCCceeEeecceeeCCCCCCc-h--hHH----H-HHHHHcCCcccCCCCCCceeeee
Q 024575          126 K-SRHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNP-V--EEW----F-FHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       126 ~-~~~~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~-~--~~~----~-~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      . .|..+|...+.+.+    +  ..++++.+.||.+..+..... .  ...    . ....... ..+       ..-+.
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-------~~r~~  223 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP-------IGRMP  223 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-------CCCCC
Confidence            2 23488999888763    2  238999999999877632110 0  000    0 0000000 011       12345


Q ss_pred             eHHHHHHHHHHHhcCcc---ccCceEEecCCC
Q 024575          191 HVKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~  219 (265)
                      ..+|++++++.++.++.   ..|+.+.+.++.
T Consensus       224 ~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       224 DAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             ChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            68999999988876532   357777777664

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.38  E-value=6.2e-12  Score=96.10  Aligned_cols=161  Identities=17%  Similarity=0.204  Sum_probs=108.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|.+|++++++|.++ ++|++++|++.                      .+++|+++.++++++++.. ++|++||+
T Consensus         6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999 99999988642                      2689999999998888754 69999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCcc-ccccchhh
Q 024575           80 NGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLN  134 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~~~~~k~~  134 (265)
                      +|....                    +..+++++    +++..+++++||.....           +.... .|..+|..
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~~sK~a  131 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PIPGGASAATVNGA  131 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CCCCchHHHHHHHH
Confidence            986311                    11233333    22345789988765321           11112 23478887


Q ss_pred             HHHHHh------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          135 TESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       135 ~E~~~~------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      .+.+.+      ..+++++.++||.+-.+..          .  .+..+  ++     ..++..+|+|+.+..+++.. .
T Consensus       132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~----------~--~~~~~--~~-----~~~~~~~~~a~~~~~~~~~~-~  191 (199)
T PRK07578        132 LEGFVKAAALELPRGIRINVVSPTVLTESLE----------K--YGPFF--PG-----FEPVPAARVALAYVRSVEGA-Q  191 (199)
T ss_pred             HHHHHHHHHHHccCCeEEEEEcCCcccCchh----------h--hhhcC--CC-----CCCCCHHHHHHHHHHHhccc-e
Confidence            777653      3579999999997744310          0  01101  11     13568999999999998865 3


Q ss_pred             cCceEEe
Q 024575          209 SRQVFNI  215 (265)
Q Consensus       209 ~~~~~~i  215 (265)
                      .|+.|++
T Consensus       192 ~g~~~~~  198 (199)
T PRK07578        192 TGEVYKV  198 (199)
T ss_pred             eeEEecc
Confidence            4667665

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.38  E-value=5.2e-12  Score=113.56  Aligned_cols=172  Identities=15%  Similarity=0.179  Sum_probs=116.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|++|++++++|+++|++|++++|+++...+..     ..+.....++.++.+|++|.+++.++++.     .++|+
T Consensus       377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELV-----AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421111     11111124688899999999988877763     26899


Q ss_pred             EEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||++|....                      +    +..++..++  +..++|++||...+....          ....
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  521 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP----------RFSA  521 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------Ccch
Confidence            9999985310                      0    112233344  557899999988764211          1122


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      |..+|...+.+.+       ..++++++++||.+..+.....            ...       .....+..+++|+.++
T Consensus       522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~~-------~~~~~~~~~~~a~~i~  582 (657)
T PRK07201        522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KRY-------NNVPTISPEEAADMVV  582 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------ccc-------cCCCCCCHHHHHHHHH
Confidence            3488998888763       3589999999999877632110            000       0123467899999999


Q ss_pred             HHhcCc
Q 024575          201 QVLGNE  206 (265)
Q Consensus       201 ~~~~~~  206 (265)
                      ..+...
T Consensus       583 ~~~~~~  588 (657)
T PRK07201        583 RAIVEK  588 (657)
T ss_pred             HHHHhC
Confidence            987654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.38  E-value=6.9e-12  Score=89.67  Aligned_cols=132  Identities=21%  Similarity=0.187  Sum_probs=102.5

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +||||-+|+.+++.+.+.+  .+|+++.|+.......            ...+.....|.+..+++...++  ++|+.|.
T Consensus        24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc   89 (238)
T KOG4039|consen   24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC   89 (238)
T ss_pred             EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence            5999999999999999987  5999999986432211            2566777889988888888888  9999999


Q ss_pred             cCCCC-------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcC
Q 024575           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (265)
Q Consensus        79 ~a~~~-------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~  143 (265)
                      +-|..             .+....+.++++  +|++|+.+||.++            ++.....|...|-+.|+-+.+..
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA------------d~sSrFlY~k~KGEvE~~v~eL~  157 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA------------DPSSRFLYMKMKGEVERDVIELD  157 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC------------Ccccceeeeeccchhhhhhhhcc
Confidence            87653             223455666666  8999999999886            22222334489999999888877


Q ss_pred             C-ceeEeecceeeCCC
Q 024575          144 V-NWTSLRPVYIYGPL  158 (265)
Q Consensus       144 ~-~~~i~r~~~i~g~~  158 (265)
                      + +++|+|||.+.|..
T Consensus       158 F~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  158 FKHIIILRPGPLLGER  173 (238)
T ss_pred             ccEEEEecCcceeccc
Confidence            6 89999999999965

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.38  E-value=8.7e-12  Score=99.73  Aligned_cols=195  Identities=13%  Similarity=0.120  Sum_probs=115.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHH----HHHhhc-----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA-----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~----~~~~~~-----   70 (265)
                      |||+|+||++++++|+++|++|+++.|+..+....+.    ..+.. ....+.++.+|++|.+++    .++++.     
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLA----AELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH----HHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            7999999999999999999999998776433221111    01100 013466789999998754    333321     


Q ss_pred             cCccEEEEcCCCCcc-------------------------------chHHHHHh----CC-C-------CCcEEEEecce
Q 024575           71 KGFDVVYDINGREAD-------------------------------EVEPILDA----LP-N-------LEQFIYCSSAG  107 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~-------------------------------~~~~l~~~----~~-~-------~~~~v~~Ss~~  107 (265)
                      .++|++||+||....                               +...++++    ++ .       ..+++++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            269999999985210                               01112222    21 1       13566676654


Q ss_pred             eeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccC
Q 024575          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (265)
Q Consensus       108 ~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  179 (265)
                      ..           .+..+...| .+|..++.+.+       ..|++++.++||.+..|....   ..........  .+.
T Consensus       163 ~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~~~--~~~  226 (267)
T TIGR02685       163 TD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYRRK--VPL  226 (267)
T ss_pred             cc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHHHh--CCC
Confidence            31           111222334 89999988763       358999999999887653211   1111111111  111


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                       +     ..+...+|++++++.++....  ..|+.+.+.++..+
T Consensus       227 -~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       227 -G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             -C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence             0     123468999999999886542  35777777776543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4.2e-12  Score=101.35  Aligned_cols=176  Identities=16%  Similarity=0.147  Sum_probs=111.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||+|++|.+++++|+++|++|++++|++.......     ..+ ....++.++.+|+.|.+++.++++.    ..+|++
T Consensus        11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072         11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALA-----ARL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            799999999999999999999999999865421111     011 1124788999999999887766542    268999


Q ss_pred             EEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccccc
Q 024575           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      ||++|....                    ++.+++++    +.  +..++|++||...+...          .....|..
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~~  154 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY----------PGYASYCA  154 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC----------CCccHHHH
Confidence            999986321                    12223333    22  34678888876532110          11122337


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+++       ..+++++.+.||.+..+...         ...  ....  .  .....+...+|+|+.++.++
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~~--~~~~--~--~~~~~~~~~~~va~~i~~~~  219 (263)
T PRK09072        155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EAV--QALN--R--ALGNAMDDPEDVAAAVLQAI  219 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hhc--cccc--c--cccCCCCCHHHHHHHHHHHH
Confidence            8887766542       35789999999987655210         000  0000  0  00113567899999999999


Q ss_pred             cCcc
Q 024575          204 GNEK  207 (265)
Q Consensus       204 ~~~~  207 (265)
                      ++..
T Consensus       220 ~~~~  223 (263)
T PRK09072        220 EKER  223 (263)
T ss_pred             hCCC
Confidence            8764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.2e-11  Score=96.40  Aligned_cols=139  Identities=19%  Similarity=0.167  Sum_probs=94.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---cCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d~vi   77 (265)
                      |||+|++|++++++|+++|++|++++|++.... .+.        . ..++.++.+|++|.+++.++++.   .++|+||
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~--------~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-ALQ--------A-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-HHH--------h-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            799999999999999999999999999876521 111        1 24678889999999888776653   3699999


Q ss_pred             EcCCCCcc----------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           78 DINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        78 ~~a~~~~~----------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      |++|....                      +...++++    ++ +..+++++||...  ....      .+..+...| 
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g--~~~~------~~~~~~~~Y~  148 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLG--SVEL------PDGGEMPLYK  148 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcc--cccc------CCCCCccchH
Confidence            99976311                      12223333    33 3357888887532  1110      011122234 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCC
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~  157 (265)
                      .+|...+.+++       ..+++++.++||.+-.+
T Consensus       149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            88999888764       35789999999988665

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.36  E-value=7e-11  Score=86.01  Aligned_cols=199  Identities=15%  Similarity=0.144  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+..||++++..|.++|++|.+.+++..........+     . ...+...+.||+++.+++...+++     ..+++
T Consensus        20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L-----~-g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDL-----G-GYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhc-----C-CCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999877532211111     0 024677899999998877665543     26899


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||||.+.+.                        .+...+++.    ..-++|.+||+--.-.+.+  .+........-
T Consensus        94 lVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G--QtnYAAsK~Gv  171 (256)
T KOG1200|consen   94 LVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG--QTNYAASKGGV  171 (256)
T ss_pred             EEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc--chhhhhhcCce
Confidence            99999986432                        222333311    3348999998542111111  00111111111


Q ss_pred             cccchhhHHHHHhhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          128 RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       128 ~~~~k~~~E~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ...+|..+.+ +.+.++++..+.||+|-.|. ...+.+...+.+...-++...+.         .+|+|..++.+.....
T Consensus       172 IgftktaArE-la~knIrvN~VlPGFI~tpM-T~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~fLAS~~s  240 (256)
T KOG1200|consen  172 IGFTKTAARE-LARKNIRVNVVLPGFIATPM-TEAMPPKVLDKILGMIPMGRLGE---------AEEVANLVLFLASDAS  240 (256)
T ss_pred             eeeeHHHHHH-HhhcCceEeEeccccccChh-hhhcCHHHHHHHHccCCccccCC---------HHHHHHHHHHHhcccc
Confidence            1245555555 46679999999999998874 33445566777766655554444         7999999988875433


Q ss_pred             c--cCceEEecCC
Q 024575          208 A--SRQVFNISGE  218 (265)
Q Consensus       208 ~--~~~~~~i~~~  218 (265)
                      .  .|..+.++++
T Consensus       241 sYiTG~t~evtGG  253 (256)
T KOG1200|consen  241 SYITGTTLEVTGG  253 (256)
T ss_pred             ccccceeEEEecc
Confidence            2  3567777765

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.36  E-value=1.4e-11  Score=100.49  Aligned_cols=206  Identities=15%  Similarity=0.085  Sum_probs=125.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++.++......+...    ..+.....++.++.+|++|.+++.++++.    ..+|++
T Consensus        18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~----~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVL----DEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHH----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999999998876433111111    11111124678899999999888777653    268999


Q ss_pred             EEcCCCCcc--------------------chHHHHHhC----C-C--------CCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           77 YDINGREAD--------------------EVEPILDAL----P-N--------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~~~----~-~--------~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                      ||++|....                    +...+++++    + .        ..++|++||...+...          .
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  163 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----------V  163 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----------C
Confidence            999986321                    122233321    1 1        1479999987653211          1


Q ss_pred             CccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       124 ~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ....|..+|..++.+.+       ..+++++.+.|+. ..+     +.....    .......    .....++..+|++
T Consensus       164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~-----~~~~~~----~~~~~~~----~~~~~~~~pe~va  229 (306)
T PRK07792        164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA-----MTADVF----GDAPDVE----AGGIDPLSPEHVV  229 (306)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc-----hhhhhc----cccchhh----hhccCCCCHHHHH
Confidence            11234489998887753       3578999999872 111     111000    0000000    0112345789999


Q ss_pred             HHHHHHhcCc--cccCceEEecCC------------------CccCHHHHHHHHHHHh
Q 024575          197 RAFVQVLGNE--KASRQVFNISGE------------------KYVTFDGLARACAKVT  234 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~------------------~~~s~~el~~~i~~~~  234 (265)
                      .++..++...  ...|+.|.+.++                  ..++..|+.+.+.+.+
T Consensus       230 ~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        230 PLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             HHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            9998887542  234556655432                  4578888888888773

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.36  E-value=2.8e-11  Score=97.22  Aligned_cols=203  Identities=14%  Similarity=0.113  Sum_probs=118.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      ||| |+||++++++|. +|++|++++|++.+.....     ..+.....++.++.+|++|++++.++++.    ..+|++
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-----KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            576 799999999996 7999999999765421111     11111123578899999999988877753    369999


Q ss_pred             EEcCCCCcc-------------chHHHHHh----CCCCCcEEEEecceeeecCC-----CC---CCCCCC--------CC
Q 024575           77 YDINGREAD-------------EVEPILDA----LPNLEQFIYCSSAGVYLKSD-----LL---PHCETD--------TV  123 (265)
Q Consensus        77 i~~a~~~~~-------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~-----~~---~~~e~~--------~~  123 (265)
                      ||+||....             +..+++++    ++...++|++||........     ..   .....+        +.
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            999996421             22233333    23224567777765432110     00   000000        00


Q ss_pred             ---Cccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh---HHHHHHHHcCCcccCCCCCCceeee
Q 024575          124 ---DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       124 ---~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                         .+...| .+|...+.+.+       ..+++++.+.||.+..+.....+.   ..........  .+       ..-+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK--SP-------AGRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh--CC-------cccC
Confidence               112334 89998777653       358999999999987763211100   0111111111  11       1135


Q ss_pred             eeHHHHHHHHHHHhcCc--cccCceEEecCCC
Q 024575          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ...+|+|++++.++...  ...|+.+.+.++.
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            66899999999988643  3367778887764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.35  E-value=5.1e-11  Score=94.69  Aligned_cols=194  Identities=14%  Similarity=0.085  Sum_probs=118.0

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCcccc----CCCC--CChhHHhhhhccceEEEecCCChHHHHHHhhc--
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQ----QLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   70 (265)
                      |||+|  .||++++++|+++|++|+++.|.......    ...+  .....+......+.++++|+++.+++.+++..  
T Consensus        12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~   91 (256)
T PRK12859         12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT   91 (256)
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            79985  89999999999999999988654211000    0000  00011111124678899999999988877753  


Q ss_pred             ---cCccEEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC
Q 024575           71 ---KGFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        71 ---~~~d~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                         ..+|++||+++....                    +    .+.++..++  +..++|++||.....           
T Consensus        92 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------  160 (256)
T PRK12859         92 EQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-----------  160 (256)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-----------
Confidence               248999999986311                    0    122334443  456999999976431           


Q ss_pred             CCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                      +..+...| .+|..++.+.+       ..+++++.++||.+-.+....    ..........+         ...+...+
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~---------~~~~~~~~  227 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFP---------FGRIGEPK  227 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCC---------CCCCcCHH
Confidence            11122334 88988887753       357999999999886653211    11111111111         11234579


Q ss_pred             HHHHHHHHHhcCc--cccCceEEecCC
Q 024575          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (265)
                      |+++++..++...  ...|+.+.+.++
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCC
Confidence            9999999987653  235677777665

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.7e-11  Score=95.30  Aligned_cols=174  Identities=13%  Similarity=0.131  Sum_probs=115.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (265)
                      |||+|.+|+++++.|.++|++|+++.|+.++... ..+         ..++.++.+|+++++++.++++..  .+|++||
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~-~~~---------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEV-AAK---------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH---------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            7999999999999999999999999998654211 110         124678899999999988877632  5899999


Q ss_pred             cCCCCc--------------cc---------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           79 INGREA--------------DE---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        79 ~a~~~~--------------~~---------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +++...              +.               ++.++..++...++|++||...              .....|.
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------~~~~~Y~  141 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------PAGSAEA  141 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------CCccccH
Confidence            986310              00               1112222333368999988541              0112244


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..+++++.+.||.+..+.         ....   ...          +.-..+|+++++..+
T Consensus       142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---------~~~~---~~~----------p~~~~~~ia~~~~~l  199 (223)
T PRK05884        142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG---------YDGL---SRT----------PPPVAAEIARLALFL  199 (223)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh---------hhhc---cCC----------CCCCHHHHHHHHHHH
Confidence            88988887653       468999999999876541         0000   000          112679999999998


Q ss_pred             hcCc--cccCceEEecCCCc
Q 024575          203 LGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (265)
                      +...  ...|+.+.+.++..
T Consensus       200 ~s~~~~~v~G~~i~vdgg~~  219 (223)
T PRK05884        200 TTPAARHITGQTLHVSHGAL  219 (223)
T ss_pred             cCchhhccCCcEEEeCCCee
Confidence            8653  23577787777653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.34  E-value=3.4e-11  Score=93.61  Aligned_cols=172  Identities=16%  Similarity=0.110  Sum_probs=112.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---cCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d~vi   77 (265)
                      |||+|++|++++++|++.|++|++++|++... +.+.          ..+++++.+|+++.+.+.+++..   ..+|+||
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~-~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAAL-AALQ----------ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHH-HHHH----------hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            79999999999999999999999999986542 1111          13567899999999988876432   2589999


Q ss_pred             EcCCCCc----------------------cchHHHHHhC----C-CCCcEEEEecce-eeecCCCCCCCCCCCCCc-ccc
Q 024575           78 DINGREA----------------------DEVEPILDAL----P-NLEQFIYCSSAG-VYLKSDLLPHCETDTVDP-KSR  128 (265)
Q Consensus        78 ~~a~~~~----------------------~~~~~l~~~~----~-~~~~~v~~Ss~~-~~~~~~~~~~~e~~~~~~-~~~  128 (265)
                      |+++...                      .++.++++++    + ...+++++||.. .++..         +..+ ..|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~~Y  146 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTTGWLY  146 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCCcccc
Confidence            9988631                      0122333332    2 335688888754 33321         1111 124


Q ss_pred             ccchhhHHHHHhh-----cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          129 HKGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       129 ~~~k~~~E~~~~~-----~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      ..+|...+.+++.     .+++++.++||.+..+...                     +    ...+..++.+..++.++
T Consensus       147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~  201 (222)
T PRK06953        147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVI  201 (222)
T ss_pred             HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHH
Confidence            4889998887743     3678999999988766210                     0    11245788888888877


Q ss_pred             cCcc--ccCceEEecC
Q 024575          204 GNEK--ASRQVFNISG  217 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~  217 (265)
                      ....  ..+..|...+
T Consensus       202 ~~~~~~~~~~~~~~~~  217 (222)
T PRK06953        202 AQATRRDNGRFFQYDG  217 (222)
T ss_pred             HhcCcccCceEEeeCC
Confidence            5432  3455555543

>PRK05855 short chain dehydrogenase; Validated

Probab=99.34  E-value=4e-12  Score=112.71  Aligned_cols=187  Identities=16%  Similarity=0.072  Sum_probs=116.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|.++|++|++++|+.++... +.    ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus       321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAER-TA----ELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            7999999999999999999999999998654211 11    111111246789999999999888777631     5899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..+++++    +.  + ..++|++||...+....          .-..|
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y  465 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR----------SLPAY  465 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------CCcHH
Confidence            9999987321                    12223332    22  2 35899999988764211          11223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHH---HHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF---HRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..+|...+.+.+       ..|+++++++||.+-.+...........   ...........+     .......+|+|+.
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~va~~  540 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY-----QRRGYGPEKVAKA  540 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc-----cccCCCHHHHHHH
Confidence            489998887652       4589999999998866531110000000   000000000000     0112457999999


Q ss_pred             HHHHhcCcc
Q 024575          199 FVQVLGNEK  207 (265)
Q Consensus       199 ~~~~~~~~~  207 (265)
                      ++.++..+.
T Consensus       541 ~~~~~~~~~  549 (582)
T PRK05855        541 IVDAVKRNK  549 (582)
T ss_pred             HHHHHHcCC
Confidence            999998765

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.4e-11  Score=98.76  Aligned_cols=181  Identities=17%  Similarity=0.126  Sum_probs=110.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|.+|.++++.|+++|++|++++|+++.... ..    ..+.... ..+.++.+|+++++++.++++.     .++|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQ-TV----ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999987644211 10    0111111 2245678999999887766653     2589


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||++|....                    +...++++    +.   ...++|++||...+...          .....
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL----------PWHAA  150 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC----------CCCcc
Confidence            99999986311                    12223333    22   24689999987542110          01112


Q ss_pred             cccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCch------hHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       128 ~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      |..+|...+.+.       ...++++++++||.+.++......      .........        .  ......+..+|
T Consensus       151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~  220 (272)
T PRK07832        151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV--------D--RFRGHAVTPEK  220 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH--------H--hcccCCCCHHH
Confidence            337787666554       246899999999999887421100      000000000        0  00123467999


Q ss_pred             HHHHHHHHhcCc
Q 024575          195 LARAFVQVLGNE  206 (265)
Q Consensus       195 ~a~~~~~~~~~~  206 (265)
                      +|++++.+++.+
T Consensus       221 vA~~~~~~~~~~  232 (272)
T PRK07832        221 AAEKILAGVEKN  232 (272)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999654

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.7e-11  Score=95.31  Aligned_cols=171  Identities=15%  Similarity=0.083  Sum_probs=107.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCC--hHHHHHHhh----c--c
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~--~~~~~~~~~----~--~   71 (265)
                      |||+|++|++++++|+++|++|++++|++..... +.    ..+.. ....+.++.+|+.+  .+++.++++    .  .
T Consensus        12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~   86 (239)
T PRK08703         12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEK-VY----DAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG   86 (239)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHH-HH----HHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998754211 10    00100 01346778899875  334443321    1  2


Q ss_pred             CccEEEEcCCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           72 GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      .+|+|||++|...                     .+..+++++    +.  +..+++++||....           .+..
T Consensus        87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~  155 (239)
T PRK08703         87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------TPKA  155 (239)
T ss_pred             CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------cCCC
Confidence            6899999998521                     111223333    33  45689999885432           1111


Q ss_pred             cc-ccccchhhHHHHHh----h---c-CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          125 PK-SRHKGKLNTESVLE----S---K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       125 ~~-~~~~~k~~~E~~~~----~---~-~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      .. .|..+|...+.+++    +   . +++++.++||.+++|.....              .  ++  .....+...+|+
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~--------------~--~~--~~~~~~~~~~~~  217 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS--------------H--PG--EAKSERKSYGDV  217 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc--------------C--CC--CCccccCCHHHH
Confidence            22 23489999988863    1   2 58999999999998842100              0  00  111234578999


Q ss_pred             HHHHHHHhcC
Q 024575          196 ARAFVQVLGN  205 (265)
Q Consensus       196 a~~~~~~~~~  205 (265)
                      +..+..++..
T Consensus       218 ~~~~~~~~~~  227 (239)
T PRK08703        218 LPAFVWWASA  227 (239)
T ss_pred             HHHHHHHhCc
Confidence            9999998873

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.33  E-value=9.9e-12  Score=101.60  Aligned_cols=152  Identities=14%  Similarity=0.039  Sum_probs=100.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||||+||.+++++|+++|++|++++|+.++..+...     .+...  ..++.++.+|+.|.+++.++++.     ..+
T Consensus        20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA-----AIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999998765221111     11111  13578899999999988877653     258


Q ss_pred             cEEEEcCCCCcc--------c---------------hHHHHHhCC-CCCcEEEEecceeeec-CCCCCCCCCCCCCcccc
Q 024575           74 DVVYDINGREAD--------E---------------VEPILDALP-NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSR  128 (265)
Q Consensus        74 d~vi~~a~~~~~--------~---------------~~~l~~~~~-~~~~~v~~Ss~~~~~~-~~~~~~~e~~~~~~~~~  128 (265)
                      |++||+||....        +               +..++..++ +..++|++||...+.. .......++....+...
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  174 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA  174 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence            999999986311        0               222333344 4468999998765322 11112222223333344


Q ss_pred             c-cchhhHHHHHh---------hcCCceeEeecceeeCC
Q 024575          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~  157 (265)
                      | .+|...+.+.+         ..+++++.+.||.+..+
T Consensus       175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            5 89988777652         13689999999998665

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.32  E-value=1.4e-10  Score=92.38  Aligned_cols=195  Identities=11%  Similarity=0.079  Sum_probs=117.9

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||  ++.||+++++.|+++|++|++..|.... .+.+.     ++....+....+++|++|++++.++++.     .++
T Consensus        12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690         12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERVR-----KMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHHH-----HHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            686  6799999999999999999998775321 11111     1111013456789999999988877653     269


Q ss_pred             cEEEEcCCCCcc---------c--------------------hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD---------E--------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        74 d~vi~~a~~~~~---------~--------------------~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                      |++||+||....         .                    .+.++..++ +..++|++||......          .+
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~----------~~  155 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA----------IP  155 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC----------CC
Confidence            999999987421         0                    011112223 3357889988764310          01


Q ss_pred             CccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       124 ~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ....|..+|...+.+.+       ..+++++.+.||.+-.+...... .........+.  .+       ...+...+|+
T Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~peev  226 (261)
T PRK08690        156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAH--NP-------LRRNVTIEEV  226 (261)
T ss_pred             CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhc--CC-------CCCCCCHHHH
Confidence            11223488988887653       46899999999998765311000 01111111111  11       1125568999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCCc
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      |+++++++...  ...|+.+.+.++..
T Consensus       227 A~~v~~l~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        227 GNTAAFLLSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             HHHHHHHhCcccCCcceeEEEEcCCcc
Confidence            99999999754  23677888877643

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.32  E-value=1.4e-10  Score=92.30  Aligned_cols=196  Identities=11%  Similarity=0.052  Sum_probs=118.3

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+  +.||++++++|++.|++|++..|+.+...  ..+ ...++.+....+.++.+|++|++++.++++.     ..+
T Consensus        12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (258)
T PRK07370         12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGR--FEK-KVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKL   88 (258)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccch--HHH-HHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6875  79999999999999999988877543210  000 0011111113467889999999988877653     268


Q ss_pred             cEEEEcCCCCc-----c-------------------c----hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~-----~-------------------~----~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||++|...     .                   +    ++.++..++...++|++||.....           +...
T Consensus        89 D~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~  157 (258)
T PRK07370         89 DILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----------AIPN  157 (258)
T ss_pred             CEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----------CCcc
Confidence            99999998631     0                   0    122333344336899999865421           1111


Q ss_pred             c-ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 K-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~-~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      . .|..+|...+.+.+       ..+++++.+.||.+-.+..... -...........  .+       ..-+...+|++
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~~~dva  228 (258)
T PRK07370        158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEK--AP-------LRRTVTQTEVG  228 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhc--CC-------cCcCCCHHHHH
Confidence            2 23388988887763       3579999999999876531000 000111111110  01       11355679999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++..++..+.  ..|+.+.+.++.
T Consensus       229 ~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        229 NTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHhChhhccccCcEEEECCcc
Confidence            99999886532  356777776654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.31  E-value=2.9e-10  Score=91.07  Aligned_cols=195  Identities=13%  Similarity=0.142  Sum_probs=118.2

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||++  .||++++++|++.|++|++..|+... .+...     .+.........+.+|++|.+++.++++.     ..+
T Consensus        13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~-----~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505         13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVK-----PLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHH-----HHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            79986  99999999999999999999886422 11111     1110012235689999999888777653     268


Q ss_pred             cEEEEcCCCCcc------------------------c----hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +    ++.++..++...++|++||......          .+..
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~----------~~~~  156 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV----------MPNY  156 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc----------CCcc
Confidence            999999986320                        0    1112222333357999998654210          0111


Q ss_pred             cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ..|..+|...+.+.+       ..+++++.|.||.+..+..... -............++         .-+...+|+++
T Consensus       157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peeva~  227 (271)
T PRK06505        157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRTVTIDEVGG  227 (271)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------cccCCHHHHHH
Confidence            123388988887753       3689999999999877632110 000011111111111         12345899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++.++....  ..|+.+.+.++..
T Consensus       228 ~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        228 SALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHHHHhCccccccCceEEeecCCcc
Confidence            9999886532  3577788877643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.31  E-value=1.2e-12  Score=103.15  Aligned_cols=192  Identities=23%  Similarity=0.288  Sum_probs=123.4

Q ss_pred             Ccc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCc
Q 024575            2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF   73 (265)
Q Consensus         2 Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~   73 (265)
                      |++  +.||.++++.|+++|++|++++|+.++....+.     .+.. ..+.+++.+|+++++++.+++..      .++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~-----~l~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALE-----ELAK-EYGAEVIQCDLSDEESVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHH-----HHHH-HTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHH-HcCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence            566  999999999999999999999999876211111     1111 23455799999999888777553      379


Q ss_pred             cEEEEcCCCCcc----c------------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~----~------------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+++....    .                        .+.++..++...++|++||.....           +...
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-----------~~~~  143 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-----------PMPG  143 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS-----------BSTT
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc-----------cCcc
Confidence            999999876432    0                        122223333346799999876421           1111


Q ss_pred             cccc-cchhhHHHHHh-------h-cCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ...| .+|..++.+.+       . .|++++.|.||.+..+.... .....+.....+..++.         .+...+|+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------r~~~~~ev  214 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG---------RLGTPEEV  214 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS---------SHBEHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC---------CCcCHHHH
Confidence            2234 88888888753       5 79999999999887652000 00111222222222221         23468999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCC
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      |++++.++...  ...|+.+.+.+|.
T Consensus       215 A~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  215 ANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHhCccccCccCCeEEECCCc
Confidence            99999999765  3468888888763

...

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.29  E-value=2.3e-10  Score=90.97  Aligned_cols=195  Identities=10%  Similarity=0.058  Sum_probs=117.7

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||+  +.||.+++++|+++|++|++..|+... .+.+.+    ..... ..++.++.+|++|++++.++++.     ..
T Consensus        13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (257)
T PRK08594         13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRE----LADTLEGQESLLLPCDVTSDEEITACFETIKEEVGV   87 (257)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHH----HHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence            6887  899999999999999999998875322 111110    00111 24678899999999888776653     25


Q ss_pred             ccEEEEcCCCCc-----cc-----------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           73 FDVVYDINGREA-----DE-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        73 ~d~vi~~a~~~~-----~~-----------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +|++||++|...     ..                       .+.++..++...++|++||....-     +     ...
T Consensus        88 ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----~-----~~~  157 (257)
T PRK08594         88 IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----V-----VQN  157 (257)
T ss_pred             ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----C-----CCC
Confidence            899999998531     00                       112222333335899999865421     0     011


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...|..+|...+.+.+       ..+++++.+.||.+..+..... -..........  ..+       ...+...+|++
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~p~~va  228 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEE--RAP-------LRRTTTQEEVG  228 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhh--cCC-------ccccCCHHHHH
Confidence            1123388988888763       3589999999998876521000 00000001100  011       11345689999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++++++....  ..|+.+.+.++.
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             HHHHHHcCcccccccceEEEECCch
Confidence            99999886532  357777777653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.27  E-value=5.2e-10  Score=89.00  Aligned_cols=193  Identities=12%  Similarity=0.089  Sum_probs=117.2

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+  +.||.+++++|++.|++|++..|+... .+.+.     .+........++++|++|.+++.++++.     ..+
T Consensus        16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~-----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVE-----PLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHH-----HHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6887  499999999999999999999987532 11110     1111013356789999999888776653     268


Q ss_pred             cEEEEcCCCCcc-------------c---------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~-------------~---------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....             .               ++.++..++...++|++||.....           +...
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----------~~~~  158 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----------VVEN  158 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----------CCcc
Confidence            999999986321             0               122333344335788988865320           0111


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..+++++.+.||.+-.+.... ..............++         ..+...+|++
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva  229 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL---------RRLVDIDDVG  229 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2224 88888877653       468999999999886653110 0001111111111111         1245689999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++++...  ...|+.+.+.++.
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        230 AVAAFLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             HHHHHHhChhhccccCcEEeeCCcc
Confidence            9999988653  3357777776653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1.9e-10  Score=92.94  Aligned_cols=197  Identities=18%  Similarity=0.147  Sum_probs=118.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc-----cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-----IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   70 (265)
                      |||++.||.+++++|++.|++|+++.|+...     ..+.+.+ ....+.....++.++.+|++|++++.++++.     
T Consensus        12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (286)
T PRK07791         12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQA-VVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF   90 (286)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHH-HHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999999876511     0000000 0011111124577899999999888776643     


Q ss_pred             cCccEEEEcCCCCcc--------------------c----hHHHHHhCC-C-------CCcEEEEecceeeecCCCCCCC
Q 024575           71 KGFDVVYDINGREAD--------------------E----VEPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC  118 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~--------------------~----~~~l~~~~~-~-------~~~~v~~Ss~~~~~~~~~~~~~  118 (265)
                      ..+|++||+||....                    +    ++.++..+. .       ..++|++||...+...      
T Consensus        91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------  164 (286)
T PRK07791         91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS------  164 (286)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC------
Confidence            268999999986321                    1    122222222 1       2479999986643110      


Q ss_pred             CCCCCCccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       119 e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                          .....|..+|..++.+.+       ..+++++.|.|| +..+.     .............     .  ....+..
T Consensus       165 ----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~-----~~~~~~~~~~~~~-----~--~~~~~~~  227 (286)
T PRK07791        165 ----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM-----TETVFAEMMAKPE-----E--GEFDAMA  227 (286)
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc-----chhhHHHHHhcCc-----c--cccCCCC
Confidence                111223388988887653       368999999998 43321     1111111111100     0  1112456


Q ss_pred             HHHHHHHHHHHhcCc--cccCceEEecCCCcc
Q 024575          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      .+|+++++++++...  ...|+.+.+.++...
T Consensus       228 pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        228 PENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            899999999988643  346778888776544

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=2.2e-10  Score=91.01  Aligned_cols=193  Identities=15%  Similarity=0.123  Sum_probs=116.1

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCCCc-cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||  ++.||.+++++|+++|++|+++.|+... ..+.+.       ......+.++.+|++|++++.++++.     .+
T Consensus        13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA-------KRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH-------HhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            688  8999999999999999999999886421 111111       11123577899999999988776653     36


Q ss_pred             ccEEEEcCCCCcc-------------c---------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        73 ~d~vi~~a~~~~~-------------~---------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +|++||+||....             .               ++.++..++...++|++|+....+           .+.
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-----------~~~  154 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-----------WPA  154 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-----------CCc
Confidence            9999999986421             0               112223333335788877532110           001


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...|..+|...+.+.+       ..+++++.+.||.+..+...... .........+.  .+.      .+.+...+|+|
T Consensus       155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~------~~~~~~p~evA  226 (256)
T PRK07889        155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDER--APL------GWDVKDPTPVA  226 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhc--Ccc------ccccCCHHHHH
Confidence            1122388888877653       46899999999988765311000 00011111111  110      01345789999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++.++.+..  ..|+.+.+.++.
T Consensus       227 ~~v~~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        227 RAVVALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             HHHHHHhCcccccccceEEEEcCce
Confidence            99999987542  357777776653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=3.3e-10  Score=90.86  Aligned_cols=195  Identities=12%  Similarity=0.083  Sum_probs=117.2

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+  +.||+++++.|++.|++|++..|+... .+.+.+    ...+.... .++.+|++|.+++.++++.     .++
T Consensus        11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~----~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415         11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEP----IAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHH----HHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6886  799999999999999999999887421 111100    00111122 5789999999888776653     268


Q ss_pred             cEEEEcCCCCcc------------------------c----hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +    ++.++..++...++|++||.....     +     .+..
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~-----~-----~~~~  154 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK-----Y-----VPHY  154 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----C-----CCcc
Confidence            999999986310                        0    222333344336899999865321     0     0011


Q ss_pred             cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..|..+|...+.+.+       ..+++++.+.||.+..+.... . ...- ..........+     ..-+...+|++++
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~-~~~~-~~~~~~~~~~p-----l~r~~~pedva~~  226 (274)
T PRK08415        155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-I-GDFR-MILKWNEINAP-----LKKNVSIEEVGNS  226 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-c-chhh-HHhhhhhhhCc-----hhccCCHHHHHHH
Confidence            123388988877653       468999999999887652110 0 0000 00000000000     1124568999999


Q ss_pred             HHHHhcCc--cccCceEEecCCC
Q 024575          199 FVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ++.++...  ...|+.+.+.++.
T Consensus       227 v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        227 GMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHhhhhhhcccccEEEEcCcc
Confidence            99998653  3467778887764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=5.6e-11  Score=93.93  Aligned_cols=179  Identities=15%  Similarity=0.135  Sum_probs=109.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCC--ChHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRK--DYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~--~~~~~~~~~~~-----~~   72 (265)
                      |||+|++|.+++++|++.|++|++++|+..+.....     ..+... ..++.++.+|++  +++++.++++.     ..
T Consensus        18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY-----DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999875421111     111111 135677888886  45544443321     26


Q ss_pred             ccEEEEcCCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|+|||+++...                     .+..+++++    +.  +..+||++||......           ...
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG-----------RAN  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC-----------CCC
Confidence            899999997521                     112223333    33  5678999998754311           111


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...| .+|..++.+++       ..++++++++|+.+-++...         ......         ....+...+|+++
T Consensus       162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~---------~~~~~~---------~~~~~~~~~~~~~  223 (247)
T PRK08945        162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA---------SAFPGE---------DPQKLKTPEDIMP  223 (247)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh---------hhcCcc---------cccCCCCHHHHHH
Confidence            2234 88988888763       24788999999877554210         000000         0113567899999


Q ss_pred             HHHHHhcCcc--ccCceE
Q 024575          198 AFVQVLGNEK--ASRQVF  213 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~  213 (265)
                      .++.++....  ..|+.+
T Consensus       224 ~~~~~~~~~~~~~~g~~~  241 (247)
T PRK08945        224 LYLYLMGDDSRRKNGQSF  241 (247)
T ss_pred             HHHHHhCccccccCCeEE
Confidence            9999886543  244443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.26  E-value=1.3e-10  Score=91.43  Aligned_cols=185  Identities=12%  Similarity=0.102  Sum_probs=112.8

Q ss_pred             HHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEEcCCCCc----
Q 024575           11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGREA----   84 (265)
Q Consensus        11 l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~~a~~~~----   84 (265)
                      +++.|+++|++|++++|+..+.                ...+++++|++|.+++.++++..  ++|++||+||...    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence            4688999999999999986551                11346799999999998888742  6999999998631    


Q ss_pred             --------cchHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCC----------------CCCCccccc-cchhhH
Q 024575           85 --------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDPKSRH-KGKLNT  135 (265)
Q Consensus        85 --------~~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~----------------~~~~~~~~~-~~k~~~  135 (265)
                              .+...++++    ++...++|++||...++.....+..+.                .+..+...| .+|...
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence                    122233333    333469999999988753221111110                122222335 899888


Q ss_pred             HHHH--------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          136 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       136 E~~~--------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      +.+.        ...|++++.++||.+.++.... .....-.........+       ...+...+|+|+++++++....
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcChhh
Confidence            7654        2357999999999998874211 1100000000000000       1124568999999999885432


Q ss_pred             --ccCceEEecCCC
Q 024575          208 --ASRQVFNISGEK  219 (265)
Q Consensus       208 --~~~~~~~i~~~~  219 (265)
                        ..|+.+.+.++.
T Consensus       217 ~~~~G~~i~vdgg~  230 (241)
T PRK12428        217 RWINGVNLPVDGGL  230 (241)
T ss_pred             cCccCcEEEecCch
Confidence              346666666653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.25  E-value=4.1e-11  Score=94.15  Aligned_cols=124  Identities=22%  Similarity=0.169  Sum_probs=87.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhc-cceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      ||||+.||.+++.+|.++|.+++.+.|..... +.+.+.   ....... ++.++++|++|.++..++++.     .++|
T Consensus        18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl-~~v~~~---l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vD   93 (282)
T KOG1205|consen   18 TGASSGIGEALAYELAKRGAKLVLVARRARRL-ERVAEE---LRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVD   93 (282)
T ss_pred             eCCCcHHHHHHHHHHHhCCCceEEeehhhhhH-HHHHHH---HHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCC
Confidence            89999999999999999999888888876652 222110   0011123 599999999999998877632     3799


Q ss_pred             EEEEcCCCCcc------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc-c
Q 024575           75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (265)
Q Consensus        75 ~vi~~a~~~~~------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~  127 (265)
                      ++||+||....                        -++.++..++  +..++|.+||+.-+-           +.... .
T Consensus        94 vLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~-----------~~P~~~~  162 (282)
T KOG1205|consen   94 VLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM-----------PLPFRSI  162 (282)
T ss_pred             EEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc-----------CCCcccc
Confidence            99999997431                        1444555566  447999999987531           11111 3


Q ss_pred             cccchhhHHHHH
Q 024575          128 RHKGKLNTESVL  139 (265)
Q Consensus       128 ~~~~k~~~E~~~  139 (265)
                      |..||.+++.+.
T Consensus       163 Y~ASK~Al~~f~  174 (282)
T KOG1205|consen  163 YSASKHALEGFF  174 (282)
T ss_pred             cchHHHHHHHHH
Confidence            449999999886

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.25  E-value=8.7e-10  Score=86.46  Aligned_cols=179  Identities=17%  Similarity=0.142  Sum_probs=112.3

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi   77 (265)
                      |||+|+||++++++|++++  ..|.+..|+....   ..          ..++.++++|+++.+++.++.+.. ++|++|
T Consensus         6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999985  5666666654321   11          257888999999998877654432 789999


Q ss_pred             EcCCCCcc------c------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           78 DINGREAD------E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        78 ~~a~~~~~------~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++|....      .                        ++.++..++  +..+++++||...  ..     ... +..+
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~-----~~~-~~~~  144 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SI-----SDN-RLGG  144 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--cc-----ccC-CCCC
Confidence            99987421      0                        112333344  3457888886321  10     000 1112


Q ss_pred             c-ccccchhhHHHHHh-------h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          126 K-SRHKGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       126 ~-~~~~~k~~~E~~~~-------~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      . .|..+|..++.+.+       .  .++++..+.||.+..+....         ....  .+       ...+...+|+
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~--~~-------~~~~~~~~~~  206 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQN--VP-------KGKLFTPEYV  206 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhc--cc-------cCCCCCHHHH
Confidence            2 23388998888763       1  37889999999887663210         0000  11       1224678999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCC
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      ++.++.++....  ..|..+.+.++
T Consensus       207 a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        207 AQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHHHHHHcCChhhCCcEEeeCCc
Confidence            999999987653  34666655543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=7.7e-10  Score=88.15  Aligned_cols=194  Identities=10%  Similarity=0.041  Sum_probs=115.8

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||++  .||.++++.|+++|++|++..|+... .+.+.     .+....+...++++|++|++++.++++.     ..+
T Consensus        14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~~-----~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRVK-----PLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHHH-----HHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            79987  79999999999999999998876321 11111     1111012234678999999988877653     259


Q ss_pred             cEEEEcCCCCc---------c----c-----------hHHHH----HhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREA---------D----E-----------VEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~---------~----~-----------~~~l~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+++...         +    .           ...++    ..++...++|++||......          .+..
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----------~~~~  157 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV----------IPNY  157 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC----------CCcc
Confidence            99999988521         0    0           11122    22333358999998654210          0111


Q ss_pred             cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ..|..+|...+.+.+       ..+++++.+.||.+-.+.... ..............++         ..+...+|+++
T Consensus       158 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~  228 (260)
T PRK06603        158 NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------KRNTTQEDVGG  228 (260)
T ss_pred             cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------CCCCCHHHHHH
Confidence            223488988887653       468999999999886652100 0001111111111111         12456899999


Q ss_pred             HHHHHhcCc--cccCceEEecCCC
Q 024575          198 AFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ++++++...  ...|+.+.+.++.
T Consensus       229 ~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        229 AAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHhCcccccCcceEEEeCCcc
Confidence            999998753  2356777777664

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.23  E-value=5.3e-10  Score=89.63  Aligned_cols=196  Identities=10%  Similarity=0.086  Sum_probs=117.3

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+  +.||.++++.|+++|++|++..|+... .+.+.     .+.........+++|++|++++.++++.     ..+
T Consensus        16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVE-----PLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHH-----HHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6886  799999999999999999988775321 11110     0111013356789999999988877653     258


Q ss_pred             cEEEEcCCCCcc------------------------chHHHH----HhCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +...++    ..+++..++|++||......          .+..
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~----------~p~~  159 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV----------MPHY  159 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC----------CCcc
Confidence            999999986310                        011222    22333468899988653210          0111


Q ss_pred             cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..|..+|...+.+.+       ..+++++.+.||.+..+................. ..+       ...+...+|+|++
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p-------~~r~~~peevA~~  231 (272)
T PRK08159        160 NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEY-NAP-------LRRTVTIEEVGDS  231 (272)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHh-CCc-------ccccCCHHHHHHH
Confidence            223488988887753       3579999999998865421000000000000000 011       1124678999999


Q ss_pred             HHHHhcCc--cccCceEEecCCCc
Q 024575          199 FVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      +++++...  ...|..+.+.++..
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        232 ALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHHHhCccccCccceEEEECCCce
Confidence            99998653  34677888888753

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.23  E-value=4e-10  Score=92.23  Aligned_cols=191  Identities=14%  Similarity=0.131  Sum_probs=112.7

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||.+++++|+++| ++|++++|+..+... ..    ..+......+.++.+|+++.+++.++++.     .++|
T Consensus         9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~-~~----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQ-AA----KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HH----HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 999999998654211 11    01111124577889999999888776653     2699


Q ss_pred             EEEEcCCCCcc---------------------c----hHHHHHhCC-C---CCcEEEEecceeeecCCC----CC-----
Q 024575           75 VVYDINGREAD---------------------E----VEPILDALP-N---LEQFIYCSSAGVYLKSDL----LP-----  116 (265)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~l~~~~~-~---~~~~v~~Ss~~~~~~~~~----~~-----  116 (265)
                      ++||+||....                     +    ++.++..++ .   ..++|++||...+.....    .+     
T Consensus        84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  163 (314)
T TIGR01289        84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD  163 (314)
T ss_pred             EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence            99999986210                     0    222344443 2   369999999876532100    00     


Q ss_pred             -------------CCCCCCCCccccc-cchhhHHHHH----hh----cCCceeEeecceeeC-CCCC--CchhHHHHHHH
Q 024575          117 -------------HCETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYG-PLNY--NPVEEWFFHRL  171 (265)
Q Consensus       117 -------------~~e~~~~~~~~~~-~~k~~~E~~~----~~----~~~~~~i~r~~~i~g-~~~~--~~~~~~~~~~~  171 (265)
                                   ..+..+..+...| .+|.....+.    ++    .++.++.++||.+.. +...  ......+....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~  243 (314)
T TIGR01289       164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF  243 (314)
T ss_pred             cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence                         0011112233335 8898855543    21    478999999998853 2211  11111111111


Q ss_pred             HcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      ..   ...       ..+.+.++.++.++.++..+
T Consensus       244 ~~---~~~-------~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       244 QK---YIT-------KGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HH---HHh-------ccccchhhhhhhhHHhhcCc
Confidence            10   000       01356889999998877653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.23  E-value=9.3e-10  Score=87.69  Aligned_cols=194  Identities=14%  Similarity=0.115  Sum_probs=116.3

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||++  .||+++++.|++.|++|++..|+. ...+...     .+....+.+..+.+|++|++++.++++.     ..+
T Consensus        12 TGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984         12 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVE-----EFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             eCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHH-----HHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            78875  899999999999999999888863 1111110     1111113466889999999988877753     258


Q ss_pred             cEEEEcCCCCcc-------------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD-------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |++||++|....                         +...+.++    ++...++|++||.....     +     ...
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----~-----~~~  155 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----A-----IPN  155 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----C-----CCC
Confidence            999999985311                         00111222    23335788998865320     0     011


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...|..+|...+.+.+       ..+++++.+.||.+..+.... .-............++         ..+...+|++
T Consensus       156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  226 (262)
T PRK07984        156 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVG  226 (262)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------cCCCCHHHHH
Confidence            1223388998888763       358999999999886542100 0000111111111111         1245689999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++++...  ...|+.+.+.++.
T Consensus       227 ~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        227 NSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHHHHcCcccccccCcEEEECCCc
Confidence            9999998753  3357777777663

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.23  E-value=1.3e-10  Score=99.88  Aligned_cols=191  Identities=17%  Similarity=0.187  Sum_probs=116.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|.||.++++.|.++|++|++++|.....  .+.     .... ..+...+.+|+++.+++.++++..     .+|+
T Consensus       216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~--~l~-----~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGE--ALA-----AVAN-RVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH--HHH-----HHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            79999999999999999999999998853321  000     0000 124568899999998887766531     5899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhCC------CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~~------~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||++|....                    +..++.+++.      ...+||++||...+...          .....|.
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~----------~~~~~Y~  357 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN----------RGQTNYA  357 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------CCChHHH
Confidence            9999986321                    1223333321      33689999987653111          1112334


Q ss_pred             cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.++       +..+++++.+.||.+-.+.. ..+ +.......+  .+.      ........+|+++++.++
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-~~~-~~~~~~~~~--~~~------~l~~~~~p~dva~~~~~l  427 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT-AAI-PFATREAGR--RMN------SLQQGGLPVDVAETIAWL  427 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-hcc-chhHHHHHh--hcC------CcCCCCCHHHHHHHHHHH
Confidence            8888666654       34689999999998754321 101 111111110  010      011123468999999998


Q ss_pred             hcCcc--ccCceEEecCCC
Q 024575          203 LGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (265)
                      +....  ..|+.+.++++.
T Consensus       428 ~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        428 ASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             hChhhcCCCCCEEEECCCc
Confidence            86432  357788887754

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.8e-10  Score=90.71  Aligned_cols=70  Identities=19%  Similarity=0.190  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+|++|++++++|+++|++|++++|+.........          ......+.+|+++.+++.+.+.  ++|++||+|
T Consensus        20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA   87 (245)
T PRK12367         20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEESLDKQLA--SLDVLILNH   87 (245)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence            7999999999999999999999999998632111110          1223578899999999988887  899999999


Q ss_pred             CC
Q 024575           81 GR   82 (265)
Q Consensus        81 ~~   82 (265)
                      |.
T Consensus        88 G~   89 (245)
T PRK12367         88 GI   89 (245)
T ss_pred             cc
Confidence            86

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.21  E-value=5.1e-10  Score=89.14  Aligned_cols=194  Identities=13%  Similarity=0.112  Sum_probs=116.1

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||  ++.||.+++++|++.|++|++..|.... .+.+.     .+....+....+.+|++|++++.++++.     ..+
T Consensus        12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997         12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRIT-----EFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHH-----HHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            685  6799999999999999999988764221 11110     0111012334688999999988877753     269


Q ss_pred             cEEEEcCCCCcc----------c-------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD----------E-------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~~----------~-------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |++||+||....          .                   ++.++..+++..++|++||....-     +     ...
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----~-----~~~  155 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----V-----VPN  155 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----C-----CCC
Confidence            999999986310          0                   112233334346799999865421     0     011


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...|..+|...+.+.+       ..+++++.+.||.+-.+...... ...........  .+       ..-+...+|++
T Consensus       156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedva  226 (260)
T PRK06997        156 YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--AP-------LRRNVTIEEVG  226 (260)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Cc-------ccccCCHHHHH
Confidence            1223488988887653       35899999999988664211000 00111111111  11       11245689999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++..++...  ...|+.+.+.++.
T Consensus       227 ~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        227 NVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHHhCccccCcceeEEEEcCCh
Confidence            9999998753  3467788777654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.20  E-value=2e-10  Score=100.62  Aligned_cols=178  Identities=16%  Similarity=0.197  Sum_probs=111.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||.++++.|+++|++|+++.|+.+......        .+...++.++.+|+++++++.++++.     ..+|+
T Consensus        11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484         11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERA--------DSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999866522111        11124577899999999988877764     26999


Q ss_pred             EEEcCCCCc-------c---------------c----hHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREA-------D---------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~-------~---------------~----~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +||++|...       +               +    ++.++..+.  + ..++|++||.......          ....
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~----------~~~~  152 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL----------PKRT  152 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC----------CCCc
Confidence            999998621       0               0    122333332  2 2489999987653211          1112


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HH-HHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .|..+|...+.+.+       ..+++++.++||.+..+........ .. ......  .++       ...+...+|+++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~  223 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS--RIP-------LGRLGRPEEIAE  223 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh--cCC-------CCCCcCHHHHHH
Confidence            24488988887753       3579999999998866531100000 00 000000  010       112456899999


Q ss_pred             HHHHHhcC
Q 024575          198 AFVQVLGN  205 (265)
Q Consensus       198 ~~~~~~~~  205 (265)
                      ++..++..
T Consensus       224 ~v~~l~~~  231 (520)
T PRK06484        224 AVFFLASD  231 (520)
T ss_pred             HHHHHhCc
Confidence            99988764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.19  E-value=2e-10  Score=91.25  Aligned_cols=184  Identities=15%  Similarity=0.105  Sum_probs=109.4

Q ss_pred             CCccccchHHHHHHHHH----cCCeEEEEEcCCCccccCCCCCChhHHhh--hhccceEEEecCCChHHHHHHhhcc---
Q 024575            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK---   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~---   71 (265)
                      |||++.||.+++++|++    .|++|+++.|+.+.... +.    ..+..  ....+.++.+|+++.+++.++++..   
T Consensus         6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~-~~----~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQ-LK----AEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHH-HH----HHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            79999999999999997    69999999998654211 11    11111  0235788999999998887766421   


Q ss_pred             ------CccEEEEcCCCCcc---------c------------------hHHHHHhCC-C---CCcEEEEecceeeecCCC
Q 024575           72 ------GFDVVYDINGREAD---------E------------------VEPILDALP-N---LEQFIYCSSAGVYLKSDL  114 (265)
Q Consensus        72 ------~~d~vi~~a~~~~~---------~------------------~~~l~~~~~-~---~~~~v~~Ss~~~~~~~~~  114 (265)
                            +.|++||+||....         .                  ++.++..++ .   ..++|++||...+.    
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----  156 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----  156 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----
Confidence                  23689999985210         0                  122333343 1   25799999976531    


Q ss_pred             CCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCce
Q 024575          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (265)
Q Consensus       115 ~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (265)
                             +......| .+|...+.+.+       ..+++++.+.||++-.+.     ...+...................
T Consensus       157 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T TIGR01500       157 -------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM-----QQQVREESVDPDMRKGLQELKAK  224 (256)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH-----HHHHHHhcCChhHHHHHHHHHhc
Confidence                   11112234 88998888763       357999999999886552     11110000000000000000001


Q ss_pred             eeeeeHHHHHHHHHHHhcC
Q 024575          187 TQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~  205 (265)
                      ..+...+|+|+.++.++++
T Consensus       225 ~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             CCCCCHHHHHHHHHHHHhc
Confidence            1256789999999999863

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05599 hypothetical protein; Provisional

Probab=99.16  E-value=1.2e-09  Score=86.20  Aligned_cols=179  Identities=20%  Similarity=0.237  Sum_probs=113.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||.+++++|. +|++|++++|++++..+ +.    .++.+.. ..+.++.+|+.|.+++.++++.     ..+|
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~-~~----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQG-LA----SDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHH-HH----HHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999998 59999999998655221 11    1111111 2477899999999888776653     2689


Q ss_pred             EEEEcCCCCccc------------------------hHHHHHhCC-C--CCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREADE------------------------VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~~~~-~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||++|.....                        ...++..+. .  ..++|++||...+-.          ......
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~----------~~~~~~  149 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA----------RRANYV  149 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC----------CcCCcc
Confidence            999999863110                        011223332 2  368999998764311          011122


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      |..+|...+.+.+       ..+++++.+.||.+..+..         .   ...+.+         -....+|+|+.++
T Consensus       150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~---------~---~~~~~~---------~~~~pe~~a~~~~  208 (246)
T PRK05599        150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT---------T---GMKPAP---------MSVYPRDVAAAVV  208 (246)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh---------c---CCCCCC---------CCCCHHHHHHHHH
Confidence            3388988877653       3579999999998866520         0   000000         0246899999999


Q ss_pred             HHhcCccccCceEEecC
Q 024575          201 QVLGNEKASRQVFNISG  217 (265)
Q Consensus       201 ~~~~~~~~~~~~~~i~~  217 (265)
                      ..+..+.. +..+.+.+
T Consensus       209 ~~~~~~~~-~~~~~~~~  224 (246)
T PRK05599        209 SAITSSKR-STTLWIPG  224 (246)
T ss_pred             HHHhcCCC-CceEEeCc
Confidence            99987643 33454544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.15  E-value=4.5e-10  Score=94.02  Aligned_cols=73  Identities=16%  Similarity=0.169  Sum_probs=58.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+|++|++++++|.++|++|++++|++++......        ....++..+.+|++|++++.+.+.  ++|++||++
T Consensus       184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--------~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--------GEDLPVKTLHWQVGQEAALAELLE--KVDILIINH  253 (406)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence            7999999999999999999999999997654211110        001346788999999999999888  899999999


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      |..
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            864

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.12  E-value=1.4e-09  Score=85.10  Aligned_cols=173  Identities=15%  Similarity=0.195  Sum_probs=116.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.+|+.++.+++++|..+++.+.+.....+....     ... .+.+..+.||+++.+++.+..++     ..+|+
T Consensus        44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~-----~~~-~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKE-----IRK-IGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHH-----HHh-cCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            89999999999999999999999999988774333221     111 13688999999999988776653     26999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    +++++..+.  +-.++|-++|...+-          ....-..|-
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~----------g~~gl~~Yc  187 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF----------GPAGLADYC  187 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc----------CCccchhhh
Confidence            9999997321                    1    334444433  667999999876531          111222233


Q ss_pred             cchhhHHHHHh----------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          130 KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       130 ~~k~~~E~~~~----------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .||..+.-+.+          ..+++.+.+.|+.+-..         ++    ++ ..+    -....+.+..+.+|+.+
T Consensus       188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg---------mf----~~-~~~----~~~l~P~L~p~~va~~I  249 (300)
T KOG1201|consen  188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG---------MF----DG-ATP----FPTLAPLLEPEYVAKRI  249 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc---------cc----CC-CCC----CccccCCCCHHHHHHHH
Confidence            78877655431          24689999999865321         11    11 111    11346888899999999


Q ss_pred             HHHhcCcc
Q 024575          200 VQVLGNEK  207 (265)
Q Consensus       200 ~~~~~~~~  207 (265)
                      +..+....
T Consensus       250 v~ai~~n~  257 (300)
T KOG1201|consen  250 VEAILTNQ  257 (300)
T ss_pred             HHHHHcCC
Confidence            99887643

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.10  E-value=2.5e-10  Score=93.56  Aligned_cols=171  Identities=15%  Similarity=0.144  Sum_probs=106.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCC--hHHHH---HHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKD--YDFVK---SSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~--~~~~~---~~~~~~~~   73 (265)
                      |||||.||++++++|+++|++|++++|++++.. .+.    .++...  ...+..+.+|+++  .+.+.   +.+...++
T Consensus        59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~-~~~----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di  133 (320)
T PLN02780         59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLK-DVS----DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV  133 (320)
T ss_pred             eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHH----HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence            799999999999999999999999999876521 111    111111  1356778899985  33333   33332356


Q ss_pred             cEEEEcCCCCcc----------------------chHH----HHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD----------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~----------------------~~~~----l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                      +...    ++..+.  +..++|++||...+...        ..+..
T Consensus       134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------~~p~~  205 (320)
T PLN02780        134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--------SDPLY  205 (320)
T ss_pred             cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------CCccc
Confidence            799999986311                      1112    333332  55789999997653100        00111


Q ss_pred             cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..|..+|...+.+.+       ..|++++.++||.+-.+...          . ...          .......+++|+.
T Consensus       206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~----------~~~~~~p~~~A~~  264 (320)
T PLN02780        206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRS----------SFLVPSSDGYARA  264 (320)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCC----------CCCCCCHHHHHHH
Confidence            223488988887752       35899999999988765210          0 000          0113468999999


Q ss_pred             HHHHhcC
Q 024575          199 FVQVLGN  205 (265)
Q Consensus       199 ~~~~~~~  205 (265)
                      ++..+..
T Consensus       265 ~~~~~~~  271 (320)
T PLN02780        265 ALRWVGY  271 (320)
T ss_pred             HHHHhCC
Confidence            9998864

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.10  E-value=6.1e-10  Score=83.13  Aligned_cols=142  Identities=18%  Similarity=0.178  Sum_probs=92.5

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|++|.++++.|.++|+ .|+++.|++........  ....+.....++.++.+|+++++.+.+++..     ..+|
T Consensus         6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (180)
T smart00822        6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE--LLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR   83 (180)
T ss_pred             EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence            69999999999999999985 68888887544211100  0011111134677899999998888777653     2479


Q ss_pred             EEEEcCCCCc--------------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      .+||+++...                    .+...+++++.  +.++++++||....-..          .....|..+|
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~----------~~~~~y~~sk  153 (180)
T smart00822       84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN----------PGQANYAAAN  153 (180)
T ss_pred             EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC----------CCchhhHHHH
Confidence            9999998521                    12445666655  56789998886542110          0111233778


Q ss_pred             hhHHHHH---hhcCCceeEeeccee
Q 024575          133 LNTESVL---ESKGVNWTSLRPVYI  154 (265)
Q Consensus       133 ~~~E~~~---~~~~~~~~i~r~~~i  154 (265)
                      ...+.++   +..+++.+.+.||.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      154 AFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHHHhcCCceEEEeeccc
Confidence            8888876   356788888888764

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN00015 protochlorophyllide reductase

Probab=99.06  E-value=8.3e-10  Score=90.14  Aligned_cols=204  Identities=14%  Similarity=0.104  Sum_probs=115.4

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||.+++++|+++| ++|++.+|+.........     .+......+.++.+|++|.+++.++++.     ..+|
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK-----SAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            7999999999999999999 999999997654211110     0000123577889999999988776653     2589


Q ss_pred             EEEEcCCCCcc----------c---------------hHHHHHhCC--C--CCcEEEEecceeeecCC---CCC---CC-
Q 024575           75 VVYDINGREAD----------E---------------VEPILDALP--N--LEQFIYCSSAGVYLKSD---LLP---HC-  118 (265)
Q Consensus        75 ~vi~~a~~~~~----------~---------------~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~---~~~---~~-  118 (265)
                      ++||+||....          .               ++.++..++  +  ..++|++||...+-...   ..+   .. 
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            99999986311          0               223344443  2  46999999976531100   000   00 


Q ss_pred             ----------C-------CCCCCccccc-cchhhHHHHH----hh----cCCceeEeecceeeCCCCCCchhHHHHHHHH
Q 024575          119 ----------E-------TDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK  172 (265)
Q Consensus       119 ----------e-------~~~~~~~~~~-~~k~~~E~~~----~~----~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~  172 (265)
                                +       .....+...| .+|...+.+.    ++    .++.++.+.||++............ .....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-~~~~~  236 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL-FRLLF  236 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH-HHHHH
Confidence                      0       0111222334 8898755442    22    4799999999998532211111111 01000


Q ss_pred             cCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEec
Q 024575          173 AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNIS  216 (265)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~  216 (265)
                      . .....+.     ..+...++.|+.++.++.+..  ..|..|...
T Consensus       237 ~-~~~~~~~-----~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~  276 (308)
T PLN00015        237 P-PFQKYIT-----KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWN  276 (308)
T ss_pred             H-HHHHHHh-----cccccHHHhhhhhhhhccccccCCCccccccC
Confidence            0 0000000     013568999999988776532  344444443

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.03  E-value=2.4e-09  Score=83.51  Aligned_cols=139  Identities=8%  Similarity=0.093  Sum_probs=93.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----c-Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~-~~d   74 (265)
                      |||++.+|.+++++|+++|++|+++.|++++..+..     ..+......+..+.+|+.+++++.++++.     . .+|
T Consensus        11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862         11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTY-----EQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999875521111     11111124577888999999988776643     2 689


Q ss_pred             EEEEcCCCCc----------cc---------------hHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           75 VVYDINGREA----------DE---------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        75 ~vi~~a~~~~----------~~---------------~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      ++||++|...          +.               .+.++..+.  + ...+|++||...+             ....
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------~~~~  152 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------QDLT  152 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------CCcc
Confidence            9999997311          00               111222232  2 3589999985421             0112


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceeeCC
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~  157 (265)
                      .|..+|...+.+.+       ..++++..+.||.+-.+
T Consensus       153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            24488888877653       46899999999987665

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.00  E-value=7.6e-09  Score=82.28  Aligned_cols=204  Identities=15%  Similarity=0.134  Sum_probs=122.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh----c--cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~--~~~d   74 (265)
                      |||+..||++++++|++.|.+|++..|+.+.........  .........+..+.+|+++++...+++.    +  .++|
T Consensus        14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid   91 (270)
T KOG0725|consen   14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQEL--GGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID   91 (270)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999987621111000  0000002458899999998766554443    2  2699


Q ss_pred             EEEEcCCCCccc----------------------hHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           75 VVYDINGREADE----------------------VEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        75 ~vi~~a~~~~~~----------------------~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +++|++|.....                      ...+..+    ++  +...++++||...+..         ....+.
T Consensus        92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~---------~~~~~~  162 (270)
T KOG0725|consen   92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP---------GPGSGV  162 (270)
T ss_pred             EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC---------CCCCcc
Confidence            999999874321                      1122222    22  4557888888764311         011112


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcC--CcccCCCCCCceeeeeeHHHHHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .|..+|..++.+.+       ..++++..+-||.+..+.....+.........+.  ..-..     ..-.+...+|++.
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-----p~gr~g~~~eva~  237 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAV-----PLGRVGTPEEVAE  237 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccc-----ccCCccCHHHHHH
Confidence            33389999988763       5789999999999988741111111111111111  00010     1123455899999


Q ss_pred             HHHHHhcCc--cccCceEEecCCCc
Q 024575          198 AFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      .+..+....  -..|+.+.+.++..
T Consensus       238 ~~~fla~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  238 AAAFLASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             hHHhhcCcccccccCCEEEEeCCEE
Confidence            998887654  23466676666544

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.99  E-value=5.6e-09  Score=85.01  Aligned_cols=191  Identities=12%  Similarity=0.038  Sum_probs=110.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCC--CC---ChhHHhhhhccceEEEecCCChHHHHHHhhc-----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   70 (265)
                      |||++.||.+++++|++.|++|++++|+.........  +.   ....+......+.++.+|+++++++.++++.     
T Consensus        14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   93 (305)
T PRK08303         14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ   93 (305)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999998543110000  00   0011111123567899999999988877653     


Q ss_pred             cCccEEEEcC-CCC----c-c-------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCC
Q 024575           71 KGFDVVYDIN-GRE----A-D-------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE  119 (265)
Q Consensus        71 ~~~d~vi~~a-~~~----~-~-------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e  119 (265)
                      ..+|++||++ +..    . .                   +    ++.++..+.  +..++|++||....-..       
T Consensus        94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~-------  166 (305)
T PRK08303         94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA-------  166 (305)
T ss_pred             CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC-------
Confidence            2689999999 631    0 0                   0    122333343  34689999985431000       


Q ss_pred             CCCCCcc-ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcc-cCCCCCCceeeee
Q 024575          120 TDTVDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLG  190 (265)
Q Consensus       120 ~~~~~~~-~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i  190 (265)
                       ...... .|..+|.....+.+       ..+++++.|.||.+-.+.     ......  ...... ..........-+.
T Consensus       167 -~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~-----~~~~~~--~~~~~~~~~~~~~p~~~~~~  238 (305)
T PRK08303        167 -THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM-----MLDAFG--VTEENWRDALAKEPHFAISE  238 (305)
T ss_pred             -cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH-----HHHhhc--cCccchhhhhccccccccCC
Confidence             001112 23388988877753       358999999999875541     100000  000000 0000000001223


Q ss_pred             eHHHHHHHHHHHhcCc
Q 024575          191 HVKDLARAFVQVLGNE  206 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~  206 (265)
                      ..+|++++++.++..+
T Consensus       239 ~peevA~~v~fL~s~~  254 (305)
T PRK08303        239 TPRYVGRAVAALAADP  254 (305)
T ss_pred             CHHHHHHHHHHHHcCc
Confidence            5899999999988765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.95  E-value=2.3e-08  Score=74.98  Aligned_cols=201  Identities=13%  Similarity=0.185  Sum_probs=119.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||.|.||.++.++|+++|..+.++.-+.+.. +..     .++.+.  ...+.++++|+++..++++++++     ..+
T Consensus        11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~-----akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen   11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAI-----AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             ecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHH-----HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            69999999999999999998777776665542 111     111111  34789999999998877777764     268


Q ss_pred             cEEEEcCCCCc----------------cchHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           74 DVVYDINGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        74 d~vi~~a~~~~----------------~~~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      |++||.||...                +.+...++++.     ...-+|.+||..-+.+....|..-.....-.++-+| 
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRS-  163 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRS-  163 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehh-
Confidence            99999999742                23445666655     235688899866442222222111111111111111 


Q ss_pred             hhHHHHHhhcCCceeEeecceeeCCCCCCchhHHHHHHHHc-CCcccCCCCC----CceeeeeeHHHHHHHHHHHhcCcc
Q 024575          133 LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       133 ~~~E~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ..-+.+.++.|++...++||..-         ..++..+.+ +..+.. .+.    -...+--+..+++..++.+++.+.
T Consensus       164 la~~ayy~~sGV~~~avCPG~t~---------t~l~~~~~~~~~~~e~-~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~  233 (261)
T KOG4169|consen  164 LADLAYYQRSGVRFNAVCPGFTR---------TDLAENIDASGGYLEY-SDSIKEALERAPKQSPACCAINIVNAIEYPK  233 (261)
T ss_pred             hhhhhhHhhcCEEEEEECCCcch---------HHHHHHHHhcCCcccc-cHHHHHHHHHcccCCHHHHHHHHHHHHhhcc
Confidence            11244557889999999998642         223333322 111110 000    001123346889999999999865


Q ss_pred             ccCceEEecCCC
Q 024575          208 ASRQVFNISGEK  219 (265)
Q Consensus       208 ~~~~~~~i~~~~  219 (265)
                       +|.+|-+.++.
T Consensus       234 -NGaiw~v~~g~  244 (261)
T KOG4169|consen  234 -NGAIWKVDSGS  244 (261)
T ss_pred             -CCcEEEEecCc
Confidence             57799888764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.94  E-value=5.3e-08  Score=78.88  Aligned_cols=200  Identities=8%  Similarity=-0.058  Sum_probs=111.5

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChh---HHhhh-----hccceEEEecC--CChH------
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ---EFAEF-----SSKILHLKGDR--KDYD------   62 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~D~--~~~~------   62 (265)
                      |||  +..||.++++.|.+.|.+|++ .|+..............   .....     ......+.+|+  .+.+      
T Consensus        15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   93 (303)
T PLN02730         15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV   93 (303)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence            799  799999999999999999988 66544311100000000   00000     01246778888  3222      


Q ss_pred             ------------HHHHHhhc-----cCccEEEEcCCCCc---c-------------------c----hHHHHHhCCCCCc
Q 024575           63 ------------FVKSSLSA-----KGFDVVYDINGREA---D-------------------E----VEPILDALPNLEQ   99 (265)
Q Consensus        63 ------------~~~~~~~~-----~~~d~vi~~a~~~~---~-------------------~----~~~l~~~~~~~~~   99 (265)
                                  ++.++++.     ..+|++||+||...   .                   +    ++.++..++...+
T Consensus        94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~  173 (303)
T PLN02730         94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA  173 (303)
T ss_pred             hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence                        45554442     25899999996421   0                   0    2223333442368


Q ss_pred             EEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHh-------h-cCCceeEeecceeeCCCCCCc-hhHHHHHH
Q 024575          100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNP-VEEWFFHR  170 (265)
Q Consensus       100 ~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~  170 (265)
                      +|++||......         .+.....|..+|...+.+.+       . .+++++.|.||.+-.+..... ........
T Consensus       174 II~isS~a~~~~---------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~  244 (303)
T PLN02730        174 SISLTYIASERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEY  244 (303)
T ss_pred             EEEEechhhcCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHH
Confidence            999998764210         01000123488998887752       2 479999999998876532110 00111111


Q ss_pred             HHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCC
Q 024575          171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ....  .+.       ..+...+|++.++++++...  ...|+.+.+.++.
T Consensus       245 ~~~~--~pl-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        245 SYAN--APL-------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             HHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            1111  110       12346899999999998643  2357777777664

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.91  E-value=1.4e-08  Score=75.30  Aligned_cols=133  Identities=17%  Similarity=0.093  Sum_probs=94.4

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCccE
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFDV   75 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d~   75 (265)
                      +++|.||.+|++.+.++|+.|++..|+.+.-. .+         ++..++.....|+++++++.+...+      .+.|+
T Consensus        15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~-~L---------~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen   15 CSSGGIGYALAKEFARNGYLVYATARRLEPMA-QL---------AIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCcchhHHHHHHHHhCCeEEEEEccccchHh-hH---------HHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            57899999999999999999999999877622 22         2246899999999999988766543      36899


Q ss_pred             EEEcCCCC--------------------ccch----HHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCcc-ccc
Q 024575           76 VYDINGRE--------------------ADEV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRH  129 (265)
Q Consensus        76 vi~~a~~~--------------------~~~~----~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~~~  129 (265)
                      ++|+||..                    .-+.    +.+.+.+. .-..+|++.|..++-            +.|. +.|
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v------------pfpf~~iY  152 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV------------PFPFGSIY  152 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe------------ccchhhhh
Confidence            99999862                    1122    22222222 345799999988762            2222 234


Q ss_pred             -cchhhHHHHH-------hhcCCceeEeecceeeC
Q 024575          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYG  156 (265)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~i~r~~~i~g  156 (265)
                       .+|.++..+-       +-.|++++.+-+|.|-.
T Consensus       153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             hHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence             8888887764       34688888888887654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.88  E-value=1.2e-08  Score=76.67  Aligned_cols=140  Identities=23%  Similarity=0.245  Sum_probs=86.0

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|.+|..+++.|.+++ .+|+++.|+........  .....+......+.++++|++|++++.+++...     .++
T Consensus         6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~   83 (181)
T PF08659_consen    6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID   83 (181)
T ss_dssp             ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred             ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence            6999999999999999997 58999999842211100  011222332457899999999999999988742     578


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHhCC--CCCcEEEEeccee-eecCCCCCCCCCCCCCccccccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~~~--~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      .|||+++...+                    ++.++.+++.  ..+.||.+||... +|..           ....|..+
T Consensus        84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~-----------gq~~YaaA  152 (181)
T PF08659_consen   84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP-----------GQSAYAAA  152 (181)
T ss_dssp             EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T-----------TBHHHHHH
T ss_pred             eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc-----------chHhHHHH
Confidence            99999987321                    3556777765  7889999998775 2221           11223244


Q ss_pred             hhhHHHHH---hhcCCceeEeecce
Q 024575          132 KLNTESVL---ESKGVNWTSLRPVY  153 (265)
Q Consensus       132 k~~~E~~~---~~~~~~~~i~r~~~  153 (265)
                      ...++.+.   ++.+.++..|.-+.
T Consensus       153 N~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  153 NAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEccc
Confidence            55555544   45678888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.86  E-value=1.1e-08  Score=82.69  Aligned_cols=154  Identities=20%  Similarity=0.096  Sum_probs=99.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      ||||+.||.++++.|+.+|.+|+...|+.....+...+...   ......+.++++|+++.+++.+..+.     ...|+
T Consensus        41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldv  117 (314)
T KOG1208|consen   41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDV  117 (314)
T ss_pred             ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccE
Confidence            79999999999999999999999999998553221111000   11135678899999999888766543     36899


Q ss_pred             EEEcCCCCcc----------------------chHHHHHhCC--CCCcEEEEecceeeecC--CCCCCCCCCC-CCccc-
Q 024575           76 VYDINGREAD----------------------EVEPILDALP--NLEQFIYCSSAGVYLKS--DLLPHCETDT-VDPKS-  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~--~~~~~~e~~~-~~~~~-  127 (265)
                      .|++||....                      -+..+++.++  ...|+|++||... +..  ......+... ..... 
T Consensus       118 LInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~~~  196 (314)
T KOG1208|consen  118 LINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSDAA  196 (314)
T ss_pred             EEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccchhH
Confidence            9999997311                      1445666666  2379999999764 110  0000011111 11111 


Q ss_pred             cccchhhHHHHH----hh--cCCceeEeecceeeCCC
Q 024575          128 RHKGKLNTESVL----ES--KGVNWTSLRPVYIYGPL  158 (265)
Q Consensus       128 ~~~~k~~~E~~~----~~--~~~~~~i~r~~~i~g~~  158 (265)
                      |..||.....+.    ++  .|+....+.||.+..+.
T Consensus       197 Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  197 YALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             HHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            337777655443    22  27999999999988774

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.81  E-value=3.6e-08  Score=70.75  Aligned_cols=190  Identities=16%  Similarity=0.217  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      ||+.-.||+.++.+|.+.|.+|+++.|++........+        ...-++++.+|+++++.+.+++... -+|..+|.
T Consensus        13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--------~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen   13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--------TPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--------CCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            67777999999999999999999999998874333322        1234899999999999998888743 36999999


Q ss_pred             CCCCccc----------------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           80 NGREADE----------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        80 a~~~~~~----------------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      ||....+                            ++++++.... ..+|.+||.+.-           .+....+.| .
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~-GaIVNvSSqas~-----------R~~~nHtvYca  152 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIK-GAIVNVSSQASI-----------RPLDNHTVYCA  152 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCC-ceEEEecchhcc-----------cccCCceEEee
Confidence            8863221                            2233333222 238888886641           122233445 7


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+-+       ...+++..+.|+.++......++.    +..++++.+.    .-..--|.-++.++.+++.++
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS----DP~K~k~mL~----riPl~rFaEV~eVVnA~lfLL  224 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS----DPDKKKKMLD----RIPLKRFAEVDEVVNAVLFLL  224 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC----Cchhccchhh----hCchhhhhHHHHHHhhheeee
Confidence            7877776532       356899999999887654322221    1111111110    001123556889999998888


Q ss_pred             cCcc--ccCceEEecCC
Q 024575          204 GNEK--ASRQVFNISGE  218 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~  218 (265)
                      .+..  ..|...-+.||
T Consensus       225 Sd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  225 SDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             ecCcCcccCceeeecCC
Confidence            6543  24545555554

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.80  E-value=1e-08  Score=75.88  Aligned_cols=124  Identities=22%  Similarity=0.208  Sum_probs=83.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcC--CCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||+|.+|.+++++|+++| +.|+++.|+  .+.. ..+    ..++.....++.++++|+++++++.++++.     ..
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~-~~l----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGA-QEL----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHH-HHH----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeeccccccc-ccc----ccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999995 688888887  1111 111    122222346789999999999888877754     36


Q ss_pred             ccEEEEcCCCCccc--------------------hHHHHHhC--CCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           73 FDVVYDINGREADE--------------------VEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        73 ~d~vi~~a~~~~~~--------------------~~~l~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +|++||++|.....                    ...+.+++  ++..++|++||....           .+......| 
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~Y~  149 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV-----------RGSPGMSAYS  149 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT-----------SSSTTBHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc-----------cCCCCChhHH
Confidence            89999999975321                    11122222  266789999987753           111222334 


Q ss_pred             cchhhHHHHHh
Q 024575          130 KGKLNTESVLE  140 (265)
Q Consensus       130 ~~k~~~E~~~~  140 (265)
                      .+|..++.+.+
T Consensus       150 askaal~~~~~  160 (167)
T PF00106_consen  150 ASKAALRGLTQ  160 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88998888764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.80  E-value=2.7e-08  Score=73.42  Aligned_cols=137  Identities=19%  Similarity=0.215  Sum_probs=94.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+..||.++++++.+.|-+|++..|+.....+....         .+.+....||+.|.++..++.+.     ...++
T Consensus        11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967          11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            79999999999999999999999999998774433322         47888999999998866555442     26899


Q ss_pred             EEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                      .    +..++..+.  .-..+|.+||.-.+-+-.           ...
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~-----------~~P  150 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA-----------STP  150 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc-----------ccc
Confidence            9999997311                      1    122333322  456788999866542211           122


Q ss_pred             cc-cchhhHHHH-------HhhcCCceeEeecceeeCC
Q 024575          128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       128 ~~-~~k~~~E~~-------~~~~~~~~~i~r~~~i~g~  157 (265)
                      -| .+|..+..+       ++..++++.-+-|+.|-.+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            34 566655443       3456789999999887654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.76  E-value=5.8e-08  Score=76.42  Aligned_cols=142  Identities=20%  Similarity=0.163  Sum_probs=94.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhc-cceEEEecCCChH----HHHHHhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYD----FVKSSLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~----~~~~~~~~~~~d~   75 (265)
                      ||||..||++.+++|+++|++|++++|+.++.. ...+    ++.+..+ .+.++.+|+++.+    .+.+.+...++.+
T Consensus        55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~-~v~k----EI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLE-AVAK----EIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHH-HHHH----HHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            799999999999999999999999999998842 2221    2222222 5778889998765    4667777667889


Q ss_pred             EEEcCCCCccc--------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~~--------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||++|...+.                          +.-++..+.  +..-+|.+||.+-.           .+..-.+
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~~s  198 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPLLS  198 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChhHH
Confidence            99999974322                          111222222  33457788876531           1222223


Q ss_pred             cc-cchhhHHHHH-------hhcCCceeEeecceeeCCC
Q 024575          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL  158 (265)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~  158 (265)
                      .| .+|...+.+-       +..|+.+-.+-|..+-++.
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            34 7777555542       4568888888898887753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.74  E-value=1.7e-07  Score=74.00  Aligned_cols=136  Identities=20%  Similarity=0.165  Sum_probs=97.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh-------ccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-------AKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~~~   73 (265)
                      ||.....|..++.+|.++|+.|.+-.-.++. .+.+....      ..++...++.|++++++++++.+       +.+.
T Consensus        35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g-ae~L~~~~------~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG-AESLRGET------KSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             ecCCcHHHHHHHHHHHhcCCEEEEEeecCch-HHHHhhhh------cCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            6888889999999999999999999966555 22222211      04788899999999998887664       3467


Q ss_pred             cEEEEcCCCC---------------------ccc----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGRE---------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~---------------------~~~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      =.+||+||..                     .-+    ++.++..++ .-.|+|++||..-.           .+.....
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR-----------~~~p~~g  176 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR-----------VALPALG  176 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC-----------ccCcccc
Confidence            8899999952                     112    344455555 55799999997631           1111233


Q ss_pred             cc-cchhhHHHHH-------hhcCCceeEeeccee
Q 024575          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYI  154 (265)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i  154 (265)
                      .| .||..+|.+.       +.+|+++.++-||.+
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            44 8999999874       457999999999943

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.69  E-value=5.9e-07  Score=67.52  Aligned_cols=178  Identities=16%  Similarity=0.153  Sum_probs=110.2

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcC-CCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-------c
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~   71 (265)
                      |||+-.||-.|+++|++. |-++++.+++ +++..+.+     ..+....+++++++.|+++.+++.++.++       .
T Consensus         9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l-----~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATEL-----ALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHH-----HHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            799999999999999986 6666666555 55531111     11111257999999999998887766653       4


Q ss_pred             CccEEEEcCCCCcc---------------------c----hHHHHHhCC-------------CCCcEEEEecceeeecCC
Q 024575           72 GFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (265)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~----~~~l~~~~~-------------~~~~~v~~Ss~~~~~~~~  113 (265)
                      +.+++|++||....                     +    ++.++..++             +...+|++||.+.-    
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s----  159 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS----  159 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc----
Confidence            78999999997211                     1    222222221             12368888886641    


Q ss_pred             CCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCc
Q 024575          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (265)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (265)
                          .......+..-| .||.++-.+.+       ..++-++.+.||+|-....               +          
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg---------------g----------  210 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG---------------G----------  210 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC---------------C----------
Confidence                111223333445 88887776654       4567888899998854321               1          


Q ss_pred             eeeeeeHHHHHHHHHHHhcC--ccccCceEEec
Q 024575          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNIS  216 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~i~  216 (265)
                      .-..+.+++-+.-++..+.+  +..+|..|+-.
T Consensus       211 ~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  211 KKAALTVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             CCcccchhhhHHHHHHHHHhcCcccCcceEccC
Confidence            12345577777777777754  34456666654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.65  E-value=3.8e-07  Score=71.90  Aligned_cols=180  Identities=20%  Similarity=0.178  Sum_probs=112.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+..+|.+++..+..+|.+|.++.|+..+..+.....   ........+.+..+|+.|.++++..++..     -+|.
T Consensus        39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l---~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~  115 (331)
T KOG1210|consen   39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAEL---ELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN  115 (331)
T ss_pred             ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhh---hhhhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence            799999999999999999999999999988854333221   11111223668899999999998888754     5899


Q ss_pred             EEEcCCCCcc--------------------chHHHHH----hCC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILD----ALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~----~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|+|||..+.                    ++.++++    +++   ...+++.+||....-           +....+.
T Consensus       116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~-----------~i~Gysa  184 (331)
T KOG1210|consen  116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML-----------GIYGYSA  184 (331)
T ss_pred             EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc-----------Ccccccc
Confidence            9999997432                    2333333    344   233888888755421           1111222


Q ss_pred             c-cchhhHHHH-------HhhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCc-c-cCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-I-PIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~-------~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|.....+       +..+++.++..-|+.+..|+.-..        . ..++ . .+.   +...+.+..+++|.+
T Consensus       185 Ys~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E--------n-~tkP~~t~ii---~g~ss~~~~e~~a~~  252 (331)
T KOG1210|consen  185 YSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE--------N-KTKPEETKII---EGGSSVIKCEEMAKA  252 (331)
T ss_pred             cccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc--------c-ccCchheeee---cCCCCCcCHHHHHHH
Confidence            2 455444333       234688888888888877752100        0 1111 0 111   112344778999999


Q ss_pred             HHHHhcCc
Q 024575          199 FVQVLGNE  206 (265)
Q Consensus       199 ~~~~~~~~  206 (265)
                      ++.=+...
T Consensus       253 ~~~~~~rg  260 (331)
T KOG1210|consen  253 IVKGMKRG  260 (331)
T ss_pred             HHhHHhhc
Confidence            87766543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.62  E-value=2.1e-06  Score=69.57  Aligned_cols=201  Identities=7%  Similarity=-0.029  Sum_probs=103.7

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCC-------CccccCCCC----CChh-----HH---hhhhccceEEEecCC
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK-------APIAQQLPG----ESDQ-----EF---AEFSSKILHLKGDRK   59 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~-------~~~~~~~~~----~~~~-----~~---~~~~~~~~~~~~D~~   59 (265)
                      |||+  ..||+++++.|.++|++|++.+|.+       .........    ....     +.   ..-....+-+.+|+.
T Consensus        14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~   93 (299)
T PRK06300         14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR   93 (299)
T ss_pred             eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence            6884  8999999999999999999976542       000000000    0000     00   000011222222222


Q ss_pred             C--------hHHHHHHhh----c-cCccEEEEcCCCCc---c-------------------c----hHHHHHhCCCCCcE
Q 024575           60 D--------YDFVKSSLS----A-KGFDVVYDINGREA---D-------------------E----VEPILDALPNLEQF  100 (265)
Q Consensus        60 ~--------~~~~~~~~~----~-~~~d~vi~~a~~~~---~-------------------~----~~~l~~~~~~~~~~  100 (265)
                      +        .+++.++++    . .++|++||++|...   .                   +    ++.++..++...++
T Consensus        94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~i  173 (299)
T PRK06300         94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGST  173 (299)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeE
Confidence            2        112333332    2 26999999997521   0                   0    22233444433578


Q ss_pred             EEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHh-------h-cCCceeEeecceeeCCCCCC-chhHHHHHHH
Q 024575          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRL  171 (265)
Q Consensus       101 v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~  171 (265)
                      |.+||....-.         .+.....|..+|...+.+.+       . .|++++.|.||.+..+.... ..........
T Consensus       174 i~iss~~~~~~---------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~  244 (299)
T PRK06300        174 ISLTYLASMRA---------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYY  244 (299)
T ss_pred             EEEeehhhcCc---------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHH
Confidence            88887553210         01000123488988877652       2 38999999999887653110 0001111111


Q ss_pred             HcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCC
Q 024575          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ...  .+.       ..+...+|+++++++++...  ...|+.+.+.++.
T Consensus       245 ~~~--~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        245 QDW--APL-------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             Hhc--CCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            111  111       12346899999999988653  2457778777653

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.54  E-value=8e-08  Score=71.51  Aligned_cols=97  Identities=18%  Similarity=0.227  Sum_probs=69.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||||++|. +++.|.+.|++|++++|++........     .+.. ...+.++.+|+.|++++.++++.     ..+|.
T Consensus         6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----ESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            699998875 999999999999999997654211110     0000 24678889999999988877753     25788


Q ss_pred             EEEcCCCCccchHHHHHhCC--CCC----cEEEEecc
Q 024575           76 VYDINGREADEVEPILDALP--NLE----QFIYCSSA  106 (265)
Q Consensus        76 vi~~a~~~~~~~~~l~~~~~--~~~----~~v~~Ss~  106 (265)
                      +|+..-  .....++..+|+  +++    +|+|+=+.
T Consensus        79 lv~~vh--~~~~~~~~~~~~~~gv~~~~~~~~h~~gs  113 (177)
T PRK08309         79 AVAWIH--SSAKDALSVVCRELDGSSETYRLFHVLGS  113 (177)
T ss_pred             EEEecc--ccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence            887654  456778888887  666    78887643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.48  E-value=3.3e-06  Score=66.78  Aligned_cols=143  Identities=19%  Similarity=0.226  Sum_probs=90.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcc-ccCCCCCChhHHhhhh-ccceEEEecCCC-hHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~-----~~   72 (265)
                      |||++.+|.++++.|++.|++|+++.|+.... .+....    ...... ..+.+..+|+++ .+++..++..     .+
T Consensus        11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028          11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAA----AIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHH----HHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999886652 111100    000000 357778899998 7776655542     24


Q ss_pred             ccEEEEcCCCCcc--c-------------------hHHHHHhCC-CCC--cEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           73 FDVVYDINGREAD--E-------------------VEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        73 ~d~vi~~a~~~~~--~-------------------~~~l~~~~~-~~~--~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|+++|+||....  .                   ...+..++. ..+  ++|.+||.... .....         ...|
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---------~~~Y  156 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---------QAAY  156 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---------cchH
Confidence            8999999997431  1                   111122111 112  89999997753 11110         1233


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCC
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~  157 (265)
                      ..+|...+.+.       ...|++++.+.||.+-.+
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            48888887664       246799999999955443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.46  E-value=1.2e-06  Score=87.93  Aligned_cols=146  Identities=15%  Similarity=0.036  Sum_probs=95.5

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCcc-----ccC-----------------------------CCC---CC--
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI-----AQQ-----------------------------LPG---ES--   40 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~-----~~~-----------------------------~~~---~~--   40 (265)
                      |||++.||..+++.|+++ |.+|++++|++...     ...                             ...   ..  
T Consensus      2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813      2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred             eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence            799999999999999998 69999999983110     000                             000   00  


Q ss_pred             ---hhHHhhhhccceEEEecCCChHHHHHHhhcc----CccEEEEcCCCC--------------------ccchHHHHHh
Q 024575           41 ---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGRE--------------------ADEVEPILDA   93 (265)
Q Consensus        41 ---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d~vi~~a~~~--------------------~~~~~~l~~~   93 (265)
                         ...+......+.++.+|++|.+++.+++...    .+|.|||+||..                    ..+..+++.+
T Consensus      2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence               0011122346889999999999888777542    589999999973                    2235566666


Q ss_pred             CC--CCCcEEEEecceee-ecCCCCCCCCCCCCCccccccchhhHHHHHh-----hcCCceeEeecceeeCC
Q 024575           94 LP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGP  157 (265)
Q Consensus        94 ~~--~~~~~v~~Ss~~~~-~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-----~~~~~~~i~r~~~i~g~  157 (265)
                      +.  ..+++|++||...+ |..           ....|..+|.....+.+     ..+++++.+.+|.+-++
T Consensus      2163 l~~~~~~~IV~~SSvag~~G~~-----------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2163 LNAENIKLLALFSSAAGFYGNT-----------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHhCCCeEEEEechhhcCCCC-----------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            54  45789999987653 211           11223377776665542     23578899999887654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK09620 hypothetical protein; Provisional

Probab=98.39  E-value=8e-07  Score=68.85  Aligned_cols=71  Identities=17%  Similarity=0.165  Sum_probs=48.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      +|||+|++++++|+++|++|+++++...........         ......+..+....+.+.+++...++|+|||+|+.
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            479999999999999999999998754321111110         12233455533334677777865589999999987

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.33  E-value=5.9e-06  Score=59.48  Aligned_cols=188  Identities=19%  Similarity=0.271  Sum_probs=114.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||.+.+|++.++.|.+.|..|.+++-..++-.+..        .++..++.+..+|+++++++..++...     ..|.
T Consensus        15 tggasglg~ataerlakqgasv~lldlp~skg~~va--------kelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   15 TGGASGLGKATAERLAKQGASVALLDLPQSKGADVA--------KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             ecCcccccHHHHHHHHhcCceEEEEeCCcccchHHH--------HHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            789999999999999999999999998777633222        222467899999999999888777542     5899


Q ss_pred             EEEcCCCCc--------------------------cchHHHHHh----CC------CCCc--EEEEecceeeecCCCCCC
Q 024575           76 VYDINGREA--------------------------DEVEPILDA----LP------NLEQ--FIYCSSAGVYLKSDLLPH  117 (265)
Q Consensus        76 vi~~a~~~~--------------------------~~~~~l~~~----~~------~~~~--~v~~Ss~~~~~~~~~~~~  117 (265)
                      .+||+|...                          .++.|++..    +.      +.+|  +|...|...|....+   
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g---  163 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG---  163 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc---
Confidence            999998621                          112222221    10      2223  333333333321111   


Q ss_pred             CCCCCCCccccccchhhHHH-------HHhhcCCceeEeecceeeCCCCCCchhHHHHHHHHc--CCcccCCCCCCceee
Q 024575          118 CETDTVDPKSRHKGKLNTES-------VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQ  188 (265)
Q Consensus       118 ~e~~~~~~~~~~~~k~~~E~-------~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  188 (265)
                             ...|..||..+--       -+...|++++.+-||.+-.|-     ...+-.....  .+.++++.      -
T Consensus       164 -------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpl-----lsslpekv~~fla~~ipfps------r  225 (260)
T KOG1199|consen  164 -------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPL-----LSSLPEKVKSFLAQLIPFPS------R  225 (260)
T ss_pred             -------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChh-----hhhhhHHHHHHHHHhCCCch------h
Confidence                   1123355544322       224468999999998754442     2222222111  11233322      2


Q ss_pred             eeeHHHHHHHHHHHhcCccccCceEEecC
Q 024575          189 LGHVKDLARAFVQVLGNEKASRQVFNISG  217 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (265)
                      +-+..+.+..+-.+++++--+|+...+.+
T Consensus       226 lg~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  226 LGHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             cCChHHHHHHHHHHHhCcccCCeEEEecc
Confidence            34568889999999999988888877765

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.31  E-value=3e-07  Score=73.49  Aligned_cols=92  Identities=18%  Similarity=0.244  Sum_probs=67.6

Q ss_pred             CCccccchHHHHHHHHH----cCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      .|||||.|.++++.+++    .+...-+..|++.+..+.+.+.....-..+...+ ++.+|..|++++.+..+  ++.+|
T Consensus        11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--~~~vi   87 (423)
T KOG2733|consen   11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--QARVI   87 (423)
T ss_pred             EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh--hhEEE
Confidence            49999999999999999    5788999999988743333221110000112334 89999999999999999  99999


Q ss_pred             EEcCCCCccchHHHHHhCC
Q 024575           77 YDINGREADEVEPILDALP   95 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~   95 (265)
                      +||+|.-.-+-.+++++|-
T Consensus        88 vN~vGPyR~hGE~VVkaci  106 (423)
T KOG2733|consen   88 VNCVGPYRFHGEPVVKACI  106 (423)
T ss_pred             EeccccceecCcHHHHHHH
Confidence            9999986666566666643

>PRK06720 hypothetical protein; Provisional

Probab=98.30  E-value=1.6e-06  Score=64.11  Aligned_cols=78  Identities=19%  Similarity=0.225  Sum_probs=56.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.+|.++++.|.+.|++|++++|+.+......     ..+........++.+|+++.+++.++++.     .++|+
T Consensus        22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-----EEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765321100     11111123567789999998887765532     26999


Q ss_pred             EEEcCCCC
Q 024575           76 VYDINGRE   83 (265)
Q Consensus        76 vi~~a~~~   83 (265)
                      +||++|..
T Consensus        97 lVnnAG~~  104 (169)
T PRK06720         97 LFQNAGLY  104 (169)
T ss_pred             EEECCCcC
Confidence            99999853

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.29  E-value=1.3e-06  Score=72.22  Aligned_cols=90  Identities=24%  Similarity=0.282  Sum_probs=69.2

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|+||+.+++.|++++ ++|++.+|+.++..+...        ...++++.+++|..|.+++.++++  +.|+||+++.
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~--------~~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p   77 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAE--------LIGGKVEALQVDAADVDALVALIK--DFDLVINAAP   77 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--------hccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence            44999999999999998 999999999877432211        112589999999999999999999  8899999998


Q ss_pred             CCccchHHHHHhCC-CCCcEEEEe
Q 024575           82 READEVEPILDALP-NLEQFIYCS  104 (265)
Q Consensus        82 ~~~~~~~~l~~~~~-~~~~~v~~S  104 (265)
                      .....  +++++|- ....++=+|
T Consensus        78 ~~~~~--~i~ka~i~~gv~yvDts   99 (389)
T COG1748          78 PFVDL--TILKACIKTGVDYVDTS   99 (389)
T ss_pred             chhhH--HHHHHHHHhCCCEEEcc
Confidence            75433  6676654 444555444

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.22  E-value=4.2e-06  Score=65.07  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=48.4

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccEEEEc
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vi~~   79 (265)
                      .+||++|++++++|+++|++|+++.|......  ..          ..++.++.++..+  .+.+.+.+.  ++|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC--CC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence            47899999999999999999999997643211  01          1356666654322  244555666  89999999


Q ss_pred             CCCC
Q 024575           80 NGRE   83 (265)
Q Consensus        80 a~~~   83 (265)
                      ||..
T Consensus        89 AAvs   92 (229)
T PRK06732         89 MAVS   92 (229)
T ss_pred             CccC
Confidence            9974

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.01  E-value=2.1e-05  Score=61.97  Aligned_cols=83  Identities=16%  Similarity=0.148  Sum_probs=63.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||||. |+.+++.|.+.|++|++.++.+... ..+..          .+...+..+..|.+++.+.+.+.++|+||+.+
T Consensus         6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~-~~~~~----------~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK-HLYPI----------HQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             EechHH-HHHHHHHHHhCCCeEEEEEccCCcc-ccccc----------cCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            599999 9999999999999999999998762 22321          33445666677888899999988999999997


Q ss_pred             CCCc-cchHHHHHhCC
Q 024575           81 GREA-DEVEPILDALP   95 (265)
Q Consensus        81 ~~~~-~~~~~l~~~~~   95 (265)
                      ..-. ....++.++|+
T Consensus        74 HPfA~~is~~a~~a~~   89 (256)
T TIGR00715        74 HPFAAQITTNATAVCK   89 (256)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            6533 44566677766

This enzyme was found to be a monomer by gel filtration.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.97  E-value=7.2e-06  Score=69.24  Aligned_cols=90  Identities=22%  Similarity=0.296  Sum_probs=62.8

Q ss_pred             CCccccchHHHHHHHHHcC-C-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|| |++|+.+++.|.+++ + +|++.+|+..+......+.       ...++..+++|+.|.+++.++++  +.|+|||
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin   73 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN   73 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence            488 999999999999985 4 8999999987732222110       13689999999999999999999  9999999


Q ss_pred             cCCCCccchHHHHHhCC-CCCcEEE
Q 024575           79 INGREADEVEPILDALP-NLEQFIY  102 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~-~~~~~v~  102 (265)
                      |++..  ....++++|- ...++|-
T Consensus        74 ~~gp~--~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPF--FGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGG--GHHHHHHHHHHHT-EEEE
T ss_pred             CCccc--hhHHHHHHHHHhCCCeec
Confidence            99875  4445555544 3334444

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.87  E-value=0.0013  Score=49.98  Aligned_cols=190  Identities=13%  Similarity=0.134  Sum_probs=108.5

Q ss_pred             ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccEEEEc
Q 024575            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVYDI   79 (265)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vi~~   79 (265)
                      --|+..+++.|.+.|.++......+.- .++..     .+.+......++.||+++.+++..++..     .++|.++|+
T Consensus        18 rSIAwGIAk~l~~~GAeL~fTy~~e~l-~krv~-----~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHs   91 (259)
T COG0623          18 RSIAWGIAKALAEQGAELAFTYQGERL-EKRVE-----ELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHS   91 (259)
T ss_pred             ccHHHHHHHHHHHcCCEEEEEeccHHH-HHHHH-----HHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEE
Confidence            357889999999999999998877622 11111     1111123456799999999988888764     279999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccc-c-c
Q 024575           80 NGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R-H  129 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~-~  129 (265)
                      .++....                        ...+.++++    ....++-+|=.+            .....|.. . .
T Consensus        92 IaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlg------------s~r~vPnYNvMG  159 (259)
T COG0623          92 IAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLG------------SERVVPNYNVMG  159 (259)
T ss_pred             eccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecc------------ceeecCCCchhH
Confidence            8874311                        122333332    333444333111            01111221 2 2


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCC-CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...|.-+|       ..|+++..|--|.|=.-. ..-.-+..++.......++.         ..+.++|++...+.
T Consensus       160 vAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~---------r~vt~eeVG~tA~f  230 (259)
T COG0623         160 VAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLR---------RNVTIEEVGNTAAF  230 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCcc---------CCCCHHHhhhhHHH
Confidence            78888887543       357788777666432110 00011233343433333332         23448999999988


Q ss_pred             HhcCc--cccCceEEecCCCcc
Q 024575          202 VLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      ++.+-  ...|++.++.+|..+
T Consensus       231 LlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             HhcchhcccccceEEEcCCcee
Confidence            87652  235788888876543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.82  E-value=3.7e-05  Score=63.05  Aligned_cols=75  Identities=16%  Similarity=0.079  Sum_probs=47.4

Q ss_pred             CCccccchHHHHHHHHHcC-------CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (265)
                      |||+|++|++++..|+..+       .+++++++++...  ..... ...+   .........|+....++.+.++  ++
T Consensus         8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~--~~~g~-~~Dl---~d~~~~~~~~~~~~~~~~~~l~--~a   79 (325)
T cd01336           8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK--ALEGV-VMEL---QDCAFPLLKSVVATTDPEEAFK--DV   79 (325)
T ss_pred             ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc--cccce-eeeh---hhccccccCCceecCCHHHHhC--CC
Confidence            6999999999999999844       5899999976431  01100 0000   0001011224444456667787  99


Q ss_pred             cEEEEcCCCC
Q 024575           74 DVVYDINGRE   83 (265)
Q Consensus        74 d~vi~~a~~~   83 (265)
                      |+|||+||..
T Consensus        80 DiVI~tAG~~   89 (325)
T cd01336          80 DVAILVGAMP   89 (325)
T ss_pred             CEEEEeCCcC
Confidence            9999999974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.78  E-value=6.7e-05  Score=61.20  Aligned_cols=148  Identities=18%  Similarity=0.172  Sum_probs=85.2

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|++|.+|+.++..|...+  .+++++++.... ...+.      +.  +........+.+|+.++.+.++  ++|+||+
T Consensus        14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~D------l~--~~~~~~~v~~~td~~~~~~~l~--gaDvVVi   82 (321)
T PTZ00325         14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAAD------LS--HIDTPAKVTGYADGELWEKALR--GADLVLI   82 (321)
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-ccccc------hh--hcCcCceEEEecCCCchHHHhC--CCCEEEE
Confidence            5888999999999998665  689999993222 11110      00  0111233445556555567777  9999999


Q ss_pred             cCCCCcc--------------chHHHHHhCC--CCCcEEEEecceeeecCCCC--CCCCCCCCCccccc-cc---hhhHH
Q 024575           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KG---KLNTE  136 (265)
Q Consensus        79 ~a~~~~~--------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~--~~~e~~~~~~~~~~-~~---k~~~E  136 (265)
                      ++|....              .+++++++++  +.+++|+++|-.+..-..-.  .........|...+ .+   -....
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            9997432              3556777766  88999999986653211000  00112222222222 11   11222


Q ss_pred             HHH-hhcCCceeEeecceeeCCCCC
Q 024575          137 SVL-ESKGVNWTSLRPVYIYGPLNY  160 (265)
Q Consensus       137 ~~~-~~~~~~~~i~r~~~i~g~~~~  160 (265)
                      .++ +..++....++ +.++|.+..
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence            223 34577777777 788887543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.71  E-value=3e-05  Score=58.87  Aligned_cols=76  Identities=22%  Similarity=0.236  Sum_probs=55.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|+.+++.|.+.|++|++++|+..+. ..+..    .+.+ ..+.....+|..+.+++.+.+.  ++|+||++.
T Consensus        34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~-~~l~~----~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at  105 (194)
T cd01078          34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERA-QKAAD----SLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG  105 (194)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHH----HHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence            58999999999999999999999999986542 11110    0000 1245566788889888888898  999999987


Q ss_pred             CCCc
Q 024575           81 GREA   84 (265)
Q Consensus        81 ~~~~   84 (265)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            6543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN00106 malate dehydrogenase

Probab=97.69  E-value=0.0001  Score=60.15  Aligned_cols=97  Identities=19%  Similarity=0.166  Sum_probs=63.5

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||++|.+|+.++..|...+  .+++++++++.. ...+.      +.  +........++.+.+++.+.++  ++|+||+
T Consensus        24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~D------l~--~~~~~~~i~~~~~~~d~~~~l~--~aDiVVi   92 (323)
T PLN00106         24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAAD------VS--HINTPAQVRGFLGDDQLGDALK--GADLVII   92 (323)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEch------hh--hCCcCceEEEEeCCCCHHHHcC--CCCEEEE
Confidence            5889999999999999765  589999987722 11111      00  0111223334445555677888  9999999


Q ss_pred             cCCCCcc--------------chHHHHHhCC--CCCcEEEEeccee
Q 024575           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGV  108 (265)
Q Consensus        79 ~a~~~~~--------------~~~~l~~~~~--~~~~~v~~Ss~~~  108 (265)
                      +||....              .++++.+.++  +...+++++|--+
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv  138 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV  138 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            9997322              2555666655  6788888887443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.66  E-value=0.00024  Score=54.73  Aligned_cols=78  Identities=15%  Similarity=0.180  Sum_probs=55.0

Q ss_pred             CCccccchHHHHHHHHHcC-----CeEEEEEcCCCccccCCCCCChhHHhhhhc----cceEEEecCCChHHHHHHhhc-
Q 024575            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSS----KILHLKGDRKDYDFVKSSLSA-   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~-   70 (265)
                      ||+++.+|-+++.+|++..     ..+++.+|+-++..+.     ..++.+..+    .++++.+|+++..++..+.++ 
T Consensus         9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~v-----c~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAV-----CAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHH-----HHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            7999999999999999874     3577778887774221     122333333    588899999987665444332 


Q ss_pred             ----cCccEEEEcCCCC
Q 024575           71 ----KGFDVVYDINGRE   83 (265)
Q Consensus        71 ----~~~d~vi~~a~~~   83 (265)
                          ...|.|+-+||..
T Consensus        84 ~~rf~~ld~iylNAg~~  100 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIM  100 (341)
T ss_pred             HHHhhhccEEEEccccC
Confidence                1789999998863

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.65  E-value=8.4e-05  Score=57.76  Aligned_cols=64  Identities=20%  Similarity=0.293  Sum_probs=45.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVY   77 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vi   77 (265)
                      +||.+|.++++.|++.|++|+++++....     ..          ..  ...+|+.+.++..+++..     ..+|++|
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-----~~----------~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV   85 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRAL-----KP----------EP--HPNLSIREIETTKDLLITLKELVQEHDILI   85 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhhc-----cc----------cc--CCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999998763211     00          00  134788877666654432     2689999


Q ss_pred             EcCCCC
Q 024575           78 DINGRE   83 (265)
Q Consensus        78 ~~a~~~   83 (265)
                      |+||..
T Consensus        86 nnAgv~   91 (227)
T TIGR02114        86 HSMAVS   91 (227)
T ss_pred             ECCEec
Confidence            999864

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.59  E-value=4.5e-05  Score=60.84  Aligned_cols=80  Identities=23%  Similarity=0.190  Sum_probs=57.2

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |||||.|..++++|.++|.+-.+..|+..+.. .+..         .-+-+....++.+++.+.+.+.  +.++|+||+|
T Consensus        13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~-~l~~---------~LG~~~~~~p~~~p~~~~~~~~--~~~VVlncvG   80 (382)
T COG3268          13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLD-ALRA---------SLGPEAAVFPLGVPAALEAMAS--RTQVVLNCVG   80 (382)
T ss_pred             ccccchhHHHHHHHHHcCCchhhccCCHHHHH-HHHH---------hcCccccccCCCCHHHHHHHHh--cceEEEeccc
Confidence            99999999999999999998888888877732 1111         1233333444555888999998  9999999999


Q ss_pred             CCccchHHHHHh
Q 024575           82 READEVEPILDA   93 (265)
Q Consensus        82 ~~~~~~~~l~~~   93 (265)
                      .-......++++
T Consensus        81 Pyt~~g~plv~a   92 (382)
T COG3268          81 PYTRYGEPLVAA   92 (382)
T ss_pred             cccccccHHHHH
Confidence            854433333333

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.57  E-value=0.00024  Score=59.84  Aligned_cols=64  Identities=17%  Similarity=0.133  Sum_probs=49.0

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc--cCccEEEEcCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~d~vi~~a~   81 (265)
                      ||.+|.++++.|.++|++|++++++...  . .+           .+  +..+|+++.+++.+.+.+  .++|++||+||
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~--~-~~-----------~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVNL--P-TP-----------AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCccc--c-CC-----------CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence            8999999999999999999999987532  1 11           12  346789998877766653  26899999998


Q ss_pred             CC
Q 024575           82 RE   83 (265)
Q Consensus        82 ~~   83 (265)
                      ..
T Consensus       277 v~  278 (399)
T PRK05579        277 VA  278 (399)
T ss_pred             cc
Confidence            63

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.45  E-value=0.00033  Score=58.07  Aligned_cols=82  Identities=11%  Similarity=0.053  Sum_probs=54.4

Q ss_pred             CCccccchHH--HHHHHHHcCCeEEEEEcCCCccccC------CCCC-ChhHHhhhhccceEEEecCCChHHHHHHhhc-
Q 024575            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQ------LPGE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (265)
Q Consensus         1 tGatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-   70 (265)
                      |||++.+|.+  +++.| +.|.+|+++++........      .... ...........+..+.+|+++++.+.++++. 
T Consensus        47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I  125 (398)
T PRK13656         47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI  125 (398)
T ss_pred             ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            7999999999  89999 9999999988643221100      0000 0011111122467889999998887766653 


Q ss_pred             ----cCccEEEEcCCCC
Q 024575           71 ----KGFDVVYDINGRE   83 (265)
Q Consensus        71 ----~~~d~vi~~a~~~   83 (265)
                          .++|++||+++..
T Consensus       126 ~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        126 KQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHhcCCCCEEEECCccC
Confidence                2699999998874

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.44  E-value=0.00031  Score=54.53  Aligned_cols=89  Identities=25%  Similarity=0.337  Sum_probs=68.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+.+++.|.+.|++|+++.++++...+....         ......+.+|-++++.+.++ +.  ++|+++-+.+
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~   75 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG   75 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence            679999999999999999999999998874432221         25788899999999999988 66  9999999888


Q ss_pred             CCccchHHHHHhCC--CCCcEEE
Q 024575           82 READEVEPILDALP--NLEQFIY  102 (265)
Q Consensus        82 ~~~~~~~~l~~~~~--~~~~~v~  102 (265)
                      .+........-+++  ++++++-
T Consensus        76 ~d~~N~i~~~la~~~~gv~~via   98 (225)
T COG0569          76 NDEVNSVLALLALKEFGVPRVIA   98 (225)
T ss_pred             CCHHHHHHHHHHHHhcCCCcEEE
Confidence            76554443333334  6666553

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.39  E-value=0.00028  Score=59.08  Aligned_cols=96  Identities=20%  Similarity=0.251  Sum_probs=62.2

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHH-HhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~d~vi~   78 (265)
                      +||||++|+.+++.|.++ +.++..+.++... .+.+..          ....+...|..+.+.+.. .++  ++|+||.
T Consensus        44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~  110 (381)
T PLN02968         44 LGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC  110 (381)
T ss_pred             ECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence            599999999999999998 6799999986544 222211          111122233332222222 245  8999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEecceeeec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~~~~~  111 (265)
                      +.+.  ....+++..++...++|-+|+..-+.+
T Consensus       111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLRD  141 (381)
T ss_pred             cCCH--HHHHHHHHHHhCCCEEEEcCchhccCC
Confidence            8764  456667776664478999998876543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.10  E-value=0.0025  Score=48.44  Aligned_cols=172  Identities=13%  Similarity=0.083  Sum_probs=98.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEE--------ecCCChHHHHHHhh---
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--------GDRKDYDFVKSSLS---   69 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~D~~~~~~~~~~~~---   69 (265)
                      ||+|-.||..++..+...+.+.....++.....              ..+.....        +|+++...+....+   
T Consensus        12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--------------~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r   77 (253)
T KOG1204|consen   12 TGASRGIGTGSVATILAEDDEALRYGVARLLAE--------------LEGLKVAYGDDFVHVVGDITEEQLLGALREAPR   77 (253)
T ss_pred             ecCCCCccHHHHHHHHhcchHHHHHhhhccccc--------------ccceEEEecCCcceechHHHHHHHHHHHHhhhh
Confidence            799999999999999988765544444433311              12333333        34444333333332   


Q ss_pred             c--cCccEEEEcCCCCcc---------------------------chHHHHHhCC-C--CCcEEEEecceeeecCCCCCC
Q 024575           70 A--KGFDVVYDINGREAD---------------------------EVEPILDALP-N--LEQFIYCSSAGVYLKSDLLPH  117 (265)
Q Consensus        70 ~--~~~d~vi~~a~~~~~---------------------------~~~~l~~~~~-~--~~~~v~~Ss~~~~~~~~~~~~  117 (265)
                      .  .+-|+|||+||.-..                           -....+..++ .  .+.+|++||...-        
T Consensus        78 ~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav--------  149 (253)
T KOG1204|consen   78 KKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV--------  149 (253)
T ss_pred             hcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh--------
Confidence            1  258999999996211                           0112333344 2  3778899986642        


Q ss_pred             CCCCCCCccccc-cchhhHHHHHh-----hc-CCceeEeecceeeCCCC-----CCchhHHHHHHHHcCCcccCCCCCCc
Q 024575          118 CETDTVDPKSRH-KGKLNTESVLE-----SK-GVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (265)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~E~~~~-----~~-~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (265)
                         .+......| .+|++.+.+.+     ++ ++++..++||.+-.+..     ..++.+......++-+         .
T Consensus       150 ---~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~---------~  217 (253)
T KOG1204|consen  150 ---RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK---------E  217 (253)
T ss_pred             ---ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH---------h
Confidence               344445556 88888888763     44 78999999997755431     1122222222221111         1


Q ss_pred             eeeeeeHHHHHHHHHHHhcCc
Q 024575          186 VTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      .-.+++..+.++.+..++++.
T Consensus       218 ~~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  218 SGQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             cCCcCChhhHHHHHHHHHHhc
Confidence            123445677888888777765

>cd00704 MDH Malate dehydrogenase

Probab=96.88  E-value=0.0023  Score=52.48  Aligned_cols=62  Identities=15%  Similarity=0.106  Sum_probs=42.4

Q ss_pred             CCccccchHHHHHHHHHcC-------CeEEEEEcCC--CccccCCCCCChhHHhhhhccceEEEecCCCh----------
Q 024575            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDY----------   61 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----------   61 (265)
                      +||+|.+|+.++..|...+       ++++++++++  +...                   -...|+.|.          
T Consensus         6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~-------------------g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE-------------------GVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc-------------------eeeeehhhhcccccCCcEE
Confidence            6899999999999998765       2599998876  3211                   111222221          


Q ss_pred             -HHHHHHhhccCccEEEEcCCCC
Q 024575           62 -DFVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus        62 -~~~~~~~~~~~~d~vi~~a~~~   83 (265)
                       ....+.++  ++|+||++||..
T Consensus        67 ~~~~~~~~~--~aDiVVitAG~~   87 (323)
T cd00704          67 TTDPEEAFK--DVDVAILVGAFP   87 (323)
T ss_pred             ecChHHHhC--CCCEEEEeCCCC
Confidence             23456677  999999999974

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.86  E-value=0.0034  Score=47.05  Aligned_cols=64  Identities=16%  Similarity=0.206  Sum_probs=40.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||.+|.++++.+..+|++|+.+.....-..              ..+++.+.+.-.+  .+.+.+.+.  +.|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP--------------PPGVKVIRVESAEEMLEAVKELLP--SADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCccccc--------------cccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence            6899999999999999999999998843210              1466666654322  234445555  679999999


Q ss_pred             CC
Q 024575           81 GR   82 (265)
Q Consensus        81 ~~   82 (265)
                      +.
T Consensus        91 AV   92 (185)
T PF04127_consen   91 AV   92 (185)
T ss_dssp             B-
T ss_pred             ch
Confidence            87

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.84  E-value=0.003  Score=51.60  Aligned_cols=94  Identities=19%  Similarity=0.229  Sum_probs=57.2

Q ss_pred             CCccccchHHHHHHHHH-c--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||.+|++++..|.. .  ++++++++|++......+.      +.. .+....+.+  .+.+++.+.++  ++|+||
T Consensus         6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alD------l~~-~~~~~~i~~--~~~~d~~~~l~--~~DiVI   74 (312)
T PRK05086          6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVD------LSH-IPTAVKIKG--FSGEDPTPALE--GADVVL   74 (312)
T ss_pred             ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehh------hhc-CCCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence            58999999999998865 2  4688888887432100010      000 011122333  22334455666  899999


Q ss_pred             EcCCCCcc--------------chHHHHHhCC--CCCcEEEEec
Q 024575           78 DINGREAD--------------EVEPILDALP--NLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~--------------~~~~l~~~~~--~~~~~v~~Ss  105 (265)
                      .++|....              .+++++++++  +.+++|.+.|
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99997322              3455666665  6778888776

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.79  E-value=0.0023  Score=51.82  Aligned_cols=75  Identities=13%  Similarity=0.146  Sum_probs=51.5

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCC--ccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKA--PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +|| |.+|++++..|.+.|.+ |+++.|+..  ...+.+.    .++......+.+..+|+.+.+.+.+.+.  ..|+||
T Consensus       132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~----~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~DilI  204 (289)
T PRK12548        132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTA----EKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDILV  204 (289)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHH----HHHhhcCCCceeEEechhhhhHHHhhhc--cCCEEE
Confidence            476 89999999999999985 999999862  1111111    1111111345566788888888887777  789999


Q ss_pred             EcCCC
Q 024575           78 DINGR   82 (265)
Q Consensus        78 ~~a~~   82 (265)
                      |+...
T Consensus       205 NaTp~  209 (289)
T PRK12548        205 NATLV  209 (289)
T ss_pred             EeCCC
Confidence            98654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.75  E-value=0.0035  Score=51.48  Aligned_cols=64  Identities=14%  Similarity=0.067  Sum_probs=42.8

Q ss_pred             CCccccchHHHHHHHHHcC-------CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH-----------
Q 024575            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-----------   62 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------   62 (265)
                      +|++|.+|+.++..|...+       ++++++++++...                 ..+-...|+.|..           
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------------ccceeEeehhcccchhcCceeccC
Confidence            5889999999999998754       2699999865541                 1111222332222           


Q ss_pred             HHHHHhhccCccEEEEcCCCC
Q 024575           63 FVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus        63 ~~~~~~~~~~~d~vi~~a~~~   83 (265)
                      ...+.++  ++|+||++||..
T Consensus        68 ~~~~~~~--~aDiVVitAG~~   86 (324)
T TIGR01758        68 DPAVAFT--DVDVAILVGAFP   86 (324)
T ss_pred             ChHHHhC--CCCEEEEcCCCC
Confidence            2245666  999999999974

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.74  E-value=0.0011  Score=54.32  Aligned_cols=64  Identities=23%  Similarity=0.267  Sum_probs=44.3

Q ss_pred             CCccccchHHHHHHHHHc-C-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||+|++|+.++++|.++ | .+++++.|+.... ..+.           .  ++..+++.   .+.+++.  ++|+|||
T Consensus       161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl-~~La-----------~--el~~~~i~---~l~~~l~--~aDiVv~  221 (340)
T PRK14982        161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERL-QELQ-----------A--ELGGGKIL---SLEEALP--EADIVVW  221 (340)
T ss_pred             EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH-HHHH-----------H--HhccccHH---hHHHHHc--cCCEEEE
Confidence            799999999999999865 5 6899988875542 1111           1  11123332   3557777  8999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      +++..
T Consensus       222 ~ts~~  226 (340)
T PRK14982        222 VASMP  226 (340)
T ss_pred             CCcCC
Confidence            99863

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.56  E-value=0.0047  Score=42.97  Aligned_cols=94  Identities=18%  Similarity=0.164  Sum_probs=49.6

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +||||++|+.+++.|.++. +++..+..+..+....+.....    . ..+..-....-.+.+.+    .  ++|+||.|
T Consensus         5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~----~-~~~~~~~~~~~~~~~~~----~--~~Dvvf~a   73 (121)
T PF01118_consen    5 VGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFP----H-PKGFEDLSVEDADPEEL----S--DVDVVFLA   73 (121)
T ss_dssp             ESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTG----G-GTTTEEEBEEETSGHHH----T--TESEEEE-
T ss_pred             ECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcc----c-cccccceeEeecchhHh----h--cCCEEEec
Confidence            5999999999999999974 5666655554421222211100    0 01121111111334433    4  99999999


Q ss_pred             CCCCccchHHHHHhC-CCCCcEEEEecce
Q 024575           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (265)
Q Consensus        80 a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~  107 (265)
                      .+.  .....+...+ +...++|=+|+..
T Consensus        74 ~~~--~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   74 LPH--GASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             SCH--HHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             Cch--hHHHHHHHHHhhCCcEEEeCCHHH
Confidence            653  2334444443 3333666666543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.55  E-value=0.006  Score=50.47  Aligned_cols=87  Identities=17%  Similarity=0.161  Sum_probs=53.2

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      .||||++|+.|++.|.+++|   +++++++.... ...+.          ..+......|+.+.     .+.  ++|+||
T Consensus         7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-g~~l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf   68 (334)
T PRK14874          7 VGATGAVGREMLNILEERNFPVDKLRLLASARSA-GKELS----------FKGKELKVEDLTTF-----DFS--GVDIAL   68 (334)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-CCeee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence            59999999999999999776   45788776544 22221          12234444555432     234  899999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~  107 (265)
                      .+.+..  ....+...+ +....+|=+|+..
T Consensus        69 ~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~   97 (334)
T PRK14874         69 FSAGGS--VSKKYAPKAAAAGAVVIDNSSAF   97 (334)
T ss_pred             ECCChH--HHHHHHHHHHhCCCEEEECCchh
Confidence            987643  334444443 3223666667654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.47  E-value=0.0097  Score=50.08  Aligned_cols=64  Identities=20%  Similarity=0.270  Sum_probs=47.2

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHH-HHHhhc--cCccEEEEcC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDIN   80 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~--~~~d~vi~~a   80 (265)
                      ||.+|.++++.|..+|++|+++.+.....   .+           .++  ...|+++.+++ ..+++.  .++|++|++|
T Consensus       210 SG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~-----------~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~A  273 (390)
T TIGR00521       210 SGKMGLALAEAAYKRGADVTLITGPVSLL---TP-----------PGV--KSIKVSTAEEMLEAALNELAKDFDIFISAA  273 (390)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCCccC---CC-----------CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEcc
Confidence            57899999999999999999998765431   11           222  45788888777 444421  2689999999


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      |..
T Consensus       274 avs  276 (390)
T TIGR00521       274 AVA  276 (390)
T ss_pred             ccc
Confidence            973

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.40  E-value=0.0066  Score=50.05  Aligned_cols=88  Identities=16%  Similarity=0.159  Sum_probs=51.2

Q ss_pred             CCccccchHHHHHHHHHcCCeE---EEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQV---TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V---~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||++|+.+++.|.+++|.+   +.+... ....+.+.          ..+   ...++.+.+.. + +.  ++|+||
T Consensus        10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~----------~~~---~~l~~~~~~~~-~-~~--~vD~vF   71 (336)
T PRK05671         10 VGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP----------FAG---KNLRVREVDSF-D-FS--QVQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec----------cCC---cceEEeeCChH-H-hc--CCCEEE
Confidence            5999999999999999876533   344333 33222221          012   12333333322 1 45  899999


Q ss_pred             EcCCCCccchHHHHHhCC-CCCcEEEEeccee
Q 024575           78 DINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~  108 (265)
                      .+.+.  .....++..+. ...++|=.|+..-
T Consensus        72 la~p~--~~s~~~v~~~~~~G~~VIDlS~~fR  101 (336)
T PRK05671         72 FAAGA--AVSRSFAEKARAAGCSVIDLSGALP  101 (336)
T ss_pred             EcCCH--HHHHHHHHHHHHCCCeEEECchhhc
Confidence            98873  33445666553 4456777777654

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.29  E-value=0.011  Score=48.44  Aligned_cols=104  Identities=15%  Similarity=0.193  Sum_probs=55.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccc------eEEEecCCChHHHHHHhhccCccE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKI------LHLKGDRKDYDFVKSSLSAKGFDV   75 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~D~~~~~~~~~~~~~~~~d~   75 (265)
                      |.|.+|..++..|+++|++|++.+|++......... ....+... ..+.      ......+.-..++.++++  ++|+
T Consensus         9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~-~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~--~ad~   85 (308)
T PRK06129          9 GAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAY-IAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA--DADY   85 (308)
T ss_pred             CccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHH-HHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC--CCCE
Confidence            479999999999999999999999987542110000 00000000 0000      000000111123455666  8999


Q ss_pred             EEEcCCCCccchHHHHHhCC--CCCcEEEEecceee
Q 024575           76 VYDINGREADEVEPILDALP--NLEQFIYCSSAGVY  109 (265)
Q Consensus        76 vi~~a~~~~~~~~~l~~~~~--~~~~~v~~Ss~~~~  109 (265)
                      |+.+..........++..+.  .....+..||...+
T Consensus        86 Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         86 VQESAPENLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             EEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence            99998765444445554443  22334445665544

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.23  E-value=0.0034  Score=46.19  Aligned_cols=93  Identities=18%  Similarity=0.183  Sum_probs=50.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCC--ChhHHhhhhccceEEEecCCChHHHHHHhhc-------cCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~~   73 (265)
                      |.|-+|+.+++.|+++||+|++..|++++........  .-....+...+..++-.=+.+.+.+++++..       ..=
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            5689999999999999999999999876532111100  0001111122334444445555555554442       133


Q ss_pred             cEEEEcCCCCccchHHHHHhCC
Q 024575           74 DVVYDINGREADEVEPILDALP   95 (265)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~~~~   95 (265)
                      .++|++....+...+.+.+.++
T Consensus        88 ~iiid~sT~~p~~~~~~~~~~~  109 (163)
T PF03446_consen   88 KIIIDMSTISPETSRELAERLA  109 (163)
T ss_dssp             EEEEE-SS--HHHHHHHHHHHH
T ss_pred             eEEEecCCcchhhhhhhhhhhh
Confidence            5666666666666666666655

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.19  E-value=0.0096  Score=49.30  Aligned_cols=86  Identities=15%  Similarity=0.168  Sum_probs=51.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEE---EEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~---~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||++|+.|++.|.+++|++.   .+.+.... ...+.          ..+......|+. .    ..+.  ++|+||
T Consensus         5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~-g~~~~----------~~~~~~~~~~~~-~----~~~~--~~D~v~   66 (339)
T TIGR01296         5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSA-GRKVT----------FKGKELEVNEAK-I----ESFE--GIDIAL   66 (339)
T ss_pred             EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC-CCeee----------eCCeeEEEEeCC-h----HHhc--CCCEEE
Confidence            49999999999999999887654   44455433 12221          123455555653 1    2345  899999


Q ss_pred             EcCCCCccchHHHHHh-CC-CCCcEEEEecce
Q 024575           78 DINGREADEVEPILDA-LP-NLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~-~~-~~~~~v~~Ss~~  107 (265)
                      .+++..  ....+... ++ ++ ++|=.|+..
T Consensus        67 ~a~g~~--~s~~~a~~~~~~G~-~VID~ss~~   95 (339)
T TIGR01296        67 FSAGGS--VSKEFAPKAAKCGA-IVIDNTSAF   95 (339)
T ss_pred             ECCCHH--HHHHHHHHHHHCCC-EEEECCHHH
Confidence            998764  33333333 23 43 566666543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.16  E-value=0.067  Score=40.70  Aligned_cols=106  Identities=16%  Similarity=0.201  Sum_probs=65.4

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCC-----CC-----------CChhHHhhhhccceEEE--ecCCC-hH
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQL-----PG-----------ESDQEFAEFSSKILHLK--GDRKD-YD   62 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~-----~~-----------~~~~~~~~~~~~~~~~~--~D~~~-~~   62 (265)
                      |.|.+|+.+++.|+..| .++++++.+.-.....-     .+           .....+.+..+.+++..  .++.+ .+
T Consensus        26 G~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~~  105 (198)
T cd01485          26 GAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSNDS  105 (198)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccchh
Confidence            34559999999999999 47888887654311110     10           01123444556555444  33432 34


Q ss_pred             HHHHHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeeec
Q 024575           63 FVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (265)
Q Consensus        63 ~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~  111 (265)
                      ...+.+.  ++|+||.+.. +......+-+.|+ ....+|+.++.+.+|.
T Consensus       106 ~~~~~~~--~~dvVi~~~d-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485         106 NIEEYLQ--KFTLVIATEE-NYERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             hHHHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            5566777  8999998844 3344445556677 6678999988777764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.02  E-value=0.02  Score=45.51  Aligned_cols=81  Identities=16%  Similarity=0.061  Sum_probs=45.0

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +|++|.+|+.+++.+.+. +.+++++...........                 -..++...+++.+++.  ++|+||++
T Consensus         7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------------~~~~i~~~~dl~~ll~--~~DvVid~   67 (257)
T PRK00048          7 AGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------------GALGVAITDDLEAVLA--DADVLIDF   67 (257)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------------CCCCccccCCHHHhcc--CCCEEEEC
Confidence            478899999999988875 688888665443311111                 0112223344555565  68888877


Q ss_pred             CCCCccchHHHHHhCCCCCcEE
Q 024575           80 NGREADEVEPILDALPNLEQFI  101 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v  101 (265)
                      +..+.. ...+..+++..+++|
T Consensus        68 t~p~~~-~~~~~~al~~G~~vv   88 (257)
T PRK00048         68 TTPEAT-LENLEFALEHGKPLV   88 (257)
T ss_pred             CCHHHH-HHHHHHHHHcCCCEE
Confidence            643221 223333344334444

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.95  E-value=0.0088  Score=41.12  Aligned_cols=69  Identities=19%  Similarity=0.250  Sum_probs=52.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|.+.+.+|+++.+++.... .+.          ..++.++.+|.++++.+.++-- .+++.|+-+...
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~-~~~----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~~   72 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVE-ELR----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTDD   72 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHH-HHH----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESSS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHH-HHH----------hcccccccccchhhhHHhhcCc-cccCEEEEccCC
Confidence            4588999999999997779999999976622 111          2568999999999999887543 388988888764


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      .
T Consensus        73 d   73 (116)
T PF02254_consen   73 D   73 (116)
T ss_dssp             H
T ss_pred             H
Confidence            3

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.90  E-value=0.01  Score=51.30  Aligned_cols=68  Identities=16%  Similarity=0.293  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+++++.|.+.|++|+++++++.... .+.+         ..+++++.+|.++.+.+.++ +.  ++|.|+-+..
T Consensus         7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~-~~~~---------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~   74 (453)
T PRK09496          7 GAGQVGYTLAENLSGENNDVTVIDTDEERLR-RLQD---------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD   74 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCcEEEEECCHHHHH-HHHh---------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence            3499999999999999999999999876522 1110         14688999999999988887 66  8999988765


Q ss_pred             C
Q 024575           82 R   82 (265)
Q Consensus        82 ~   82 (265)
                      .
T Consensus        75 ~   75 (453)
T PRK09496         75 S   75 (453)
T ss_pred             C
Confidence            4

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.83  E-value=0.014  Score=48.48  Aligned_cols=95  Identities=15%  Similarity=0.117  Sum_probs=53.5

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEE-EecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||++|+.+++.|.++ +.+++.+ +++... .+.+..        ..+.+... ..++.+. +..+++.  ++|+||
T Consensus         6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~~--------~~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf   73 (346)
T TIGR01850         6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVSE--------VHPHLRGLVDLNLEPI-DEEEIAE--DADVVF   73 (346)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChHH--------hCccccccCCceeecC-CHHHhhc--CCCEEE
Confidence            599999999999999987 5788855 443322 111110        00111111 1112211 1233444  899999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEecceee
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~~~  109 (265)
                      .+.+..  ....++..+ +..+++|-.|+..-+
T Consensus        74 ~alP~~--~s~~~~~~~~~~G~~VIDlS~~fR~  104 (346)
T TIGR01850        74 LALPHG--VSAELAPELLAAGVKVIDLSADFRL  104 (346)
T ss_pred             ECCCch--HHHHHHHHHHhCCCEEEeCChhhhc
Confidence            987642  444555544 445788888886643

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.76  E-value=0.0085  Score=41.87  Aligned_cols=89  Identities=16%  Similarity=0.138  Sum_probs=50.2

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCC-ccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKA-PIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      .|++|.+|+.+++.+.+ .++++++...+.. ... .....     +    .+..  ...+.-.+++.+++.  .+|++|
T Consensus         6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-----~----~~~~--~~~~~v~~~l~~~~~--~~DVvI   72 (124)
T PF01113_consen    6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-----L----AGIG--PLGVPVTDDLEELLE--EADVVI   72 (124)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-----H----CTSS--T-SSBEBS-HHHHTT--H-SEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-----h----hCcC--CcccccchhHHHhcc--cCCEEE
Confidence            48889999999999999 5788776654444 211 11100     0    0111  111222366778888  699999


Q ss_pred             EcCCCCccchHHHHHhCC-CCCcEEEEe
Q 024575           78 DINGREADEVEPILDALP-NLEQFIYCS  104 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~-~~~~~v~~S  104 (265)
                      ++.  ++..+...++.+. ....+|.-+
T Consensus        73 DfT--~p~~~~~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   73 DFT--NPDAVYDNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             EES---HHHHHHHHHHHHHHT-EEEEE-
T ss_pred             EcC--ChHHhHHHHHHHHhCCCCEEEEC
Confidence            998  4566666666654 444555444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.73  E-value=0.013  Score=48.11  Aligned_cols=144  Identities=13%  Similarity=0.123  Sum_probs=73.8

Q ss_pred             CCccccchHHHHHHHHHcCC-------eEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (265)
                      +|++|.+|+.++..|+..+.       +++++++++... .....-...........++.+. .  .+    .+.++  +
T Consensus         8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~--d   78 (322)
T cd01338           8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D--DP----NVAFK--D   78 (322)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c--Cc----HHHhC--C
Confidence            58889999999999998763       799998865431 1111100000000000112211 1  12    34555  9


Q ss_pred             ccEEEEcCCCCccc--------------hHHHHHhCC--C--CCcEEEEecce---eeecCCCCCCCCCCC-CCccccc-
Q 024575           73 FDVVYDINGREADE--------------VEPILDALP--N--LEQFIYCSSAG---VYLKSDLLPHCETDT-VDPKSRH-  129 (265)
Q Consensus        73 ~d~vi~~a~~~~~~--------------~~~l~~~~~--~--~~~~v~~Ss~~---~~~~~~~~~~~e~~~-~~~~~~~-  129 (265)
                      .|+||.+||.....              .+.+.+.+.  .  ...++.+|-..   +|-     .. .... ..+...+ 
T Consensus        79 aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~-----~~-k~sg~~p~~~ViG  152 (322)
T cd01338          79 ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI-----AM-KNAPDIPPDNFTA  152 (322)
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH-----HH-HHcCCCChHheEE
Confidence            99999999974221              233444433  2  23455554211   000     00 0011 1112222 


Q ss_pred             cchhhHHHHH----hhcCCceeEeecceeeCCCC
Q 024575          130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (265)
Q Consensus       130 ~~k~~~E~~~----~~~~~~~~i~r~~~i~g~~~  159 (265)
                      .++...+++.    +..+++...+|...+||++.
T Consensus       153 ~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         153 MTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            3555555543    45688888999888999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=95.69  E-value=0.021  Score=40.57  Aligned_cols=67  Identities=18%  Similarity=0.135  Sum_probs=43.5

Q ss_pred             ccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|..|+.++..|.+.|.+ |+++.|+.++.. .+        .+..++..+-..++.+   +.+.+.  ++|+||++.+
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~-~l--------~~~~~~~~~~~~~~~~---~~~~~~--~~DivI~aT~   84 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAE-AL--------AEEFGGVNIEAIPLED---LEEALQ--EADIVINATP   84 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHH-HH--------HHHHTGCSEEEEEGGG---HCHHHH--TESEEEE-SS
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHH-HH--------HHHcCccccceeeHHH---HHHHHh--hCCeEEEecC
Confidence            4599999999999999975 999999876631 11        1111222233334433   446676  9999999977


Q ss_pred             CC
Q 024575           82 RE   83 (265)
Q Consensus        82 ~~   83 (265)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.65  E-value=0.057  Score=38.67  Aligned_cols=103  Identities=16%  Similarity=0.140  Sum_probs=61.6

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceE--EEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~D~~~~~~~~   65 (265)
                      |.|.+|+.+++.|...|. ++++++.+.-.....-..              .....+.+..+.+++  +..++.+ +...
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~-~~~~   84 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE-DNLD   84 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh-hhHH
Confidence            459999999999999996 788887664332111000              011223333444444  3333333 2335


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~  109 (265)
                      +.+.  ++|+||.+... ......+.++|+ ....++..++.+..
T Consensus        85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~~  126 (143)
T cd01483          85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGLG  126 (143)
T ss_pred             HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCcE
Confidence            6666  99999999765 344445666677 55778877765533

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.65  E-value=0.026  Score=46.86  Aligned_cols=94  Identities=19%  Similarity=0.136  Sum_probs=54.7

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEE-EecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +||||++|+.+++.|.++ +++++++.++.+. .+.+.+.        .+.+... ..++.+.+..  .+.  ++|+||.
T Consensus         8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~~--------~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~   74 (343)
T PRK00436          8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSDV--------HPHLRGLVDLVLEPLDPE--ILA--GADVVFL   74 (343)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHHh--------CcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence            599999999999999987 6788887774332 1111110        0111111 1223333322  334  8999998


Q ss_pred             cCCCCccchHHHHHh-CCCCCcEEEEecceee
Q 024575           79 INGREADEVEPILDA-LPNLEQFIYCSSAGVY  109 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~~~  109 (265)
                      +.+.  .....++.. ++..+++|=.|+..-+
T Consensus        75 alP~--~~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPH--GVSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             CCCc--HHHHHHHHHHHhCCCEEEECCcccCC
Confidence            8764  233344444 3455788888876644

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.60  E-value=0.12  Score=39.57  Aligned_cols=104  Identities=15%  Similarity=0.086  Sum_probs=63.6

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC----------C----CChhHHhhhhccceEEEe--cCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP----------G----ESDQEFAEFSSKILHLKG--DRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~--D~~~~~~~~   65 (265)
                      |.|.+|+.+++.|...|. ++++++++.-+....-.          +    .....+.+..+.+++...  .+ +.+.+.
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  106 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-TAENLE  106 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-CHHHHH
Confidence            579999999999999995 88888877433111100          0    011233344444444333  33 345677


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.++  ++|+||.+... ......+-+.|+ ..+.+|+.+..+.+|
T Consensus       107 ~~~~--~~D~Vi~~~d~-~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356       107 LLIN--NVDLVLDCTDN-FATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             HHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            7887  99999998643 332333445566 567889888766554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.58  E-value=0.024  Score=45.85  Aligned_cols=84  Identities=18%  Similarity=0.248  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|++..|++..... .        .  ..+...+     ..+.+.+.+.  +.|+||++...
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~--------~--~~g~~~~-----~~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLAR-I--------T--EMGLIPF-----PLNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------H--HCCCeee-----cHHHHHHHhc--cCCEEEECCCh
Confidence            45889999999999999999999998654211 0        0  0122211     2345667777  99999998765


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ... ....++.++...-+|-++|
T Consensus       220 ~ii-~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       220 LVL-TADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHh-CHHHHhcCCCCeEEEEeCc
Confidence            322 2345555664445555554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.57  E-value=0.16  Score=42.07  Aligned_cols=103  Identities=16%  Similarity=0.248  Sum_probs=64.8

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC--------------C--CChhHHhhhhccc--eEEEecCCChHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP--------------G--ESDQEFAEFSSKI--LHLKGDRKDYDF   63 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~--------------~--~~~~~~~~~~~~~--~~~~~D~~~~~~   63 (265)
                      |.|.+|+++++.|...|. ++++++++.-+....-.              +  .....+.++.+.+  +.+..|++ .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~~  109 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VEE  109 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            468899999999999996 88888887633211111              0  0112333334444  44555654 456


Q ss_pred             HHHHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeee
Q 024575           64 VKSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.++++  ++|+||.+...  ..++.++ ++|. ....+|+.+..+.+|
T Consensus       110 ~~~~~~--~~DlVid~~D~--~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        110 LEELVK--EVDLIIDATDN--FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             HHHHhc--CCCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            778888  89999999743  2333344 4455 567888888777665

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.56  E-value=0.15  Score=42.24  Aligned_cols=105  Identities=19%  Similarity=0.263  Sum_probs=65.6

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC--------------CC--ChhHHhhhhccc--eEEEecCCChHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP--------------GE--SDQEFAEFSSKI--LHLKGDRKDYDF   63 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~--------------~~--~~~~~~~~~~~~--~~~~~D~~~~~~   63 (265)
                      |.|.+|+.++..|...|. ++.+++++.-+....-.              +.  ....+.++.+.+  +.+..+++ .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~~  109 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AEE  109 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            459999999999999996 88988887533211110              00  012333334443  44445553 456


Q ss_pred             HHHHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeeec
Q 024575           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (265)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~  111 (265)
                      +.++++  ++|+||.+... ...-..+-++|. ..+.+|+.+..+.+|.
T Consensus       110 ~~~~~~--~~DlVid~~Dn-~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688        110 LEELVT--GVDLIIDATDN-FETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             HHHHHc--CCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            677787  89999999653 222233445555 5578999888777763

>PRK04148 hypothetical protein; Provisional

Probab=95.55  E-value=0.032  Score=39.25  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=54.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.| -|.+++..|.+.|++|++++.++.... ...          ...+..+.+|+.+++-  ++-+  ++|.|+.+-..
T Consensus        24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~-~a~----------~~~~~~v~dDlf~p~~--~~y~--~a~liysirpp   87 (134)
T PRK04148         24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVE-KAK----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIRPP   87 (134)
T ss_pred             Eec-CCHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeCCC
Confidence            456 788899999999999999999987521 111          2568899999998762  3344  88888877543


Q ss_pred             CccchHHHHHhCC
Q 024575           83 EADEVEPILDALP   95 (265)
Q Consensus        83 ~~~~~~~l~~~~~   95 (265)
                       .+....+++.++
T Consensus        88 -~el~~~~~~la~   99 (134)
T PRK04148         88 -RDLQPFILELAK   99 (134)
T ss_pred             -HHHHHHHHHHHH
Confidence             445556666666

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.49  E-value=0.049  Score=43.89  Aligned_cols=92  Identities=16%  Similarity=0.174  Sum_probs=62.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|+.| +|.--++.....|++|+++++.+.+..+.+.          .-+.+.+-.-..|++.++++..  --|.++|++
T Consensus       188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v  254 (360)
T KOG0023|consen  188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV  254 (360)
T ss_pred             ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence            36666 8888787777789999999999866443333          2466655444447887877776  555555554


Q ss_pred             CC-CccchHHHHHhCCCCCcEEEEec
Q 024575           81 GR-EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~-~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .. .......++..++...++|+++-
T Consensus       255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~  280 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNGTLVLVGL  280 (360)
T ss_pred             eeccccchHHHHHHhhcCCEEEEEeC
Confidence            32 23445667788886678998884

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.46  E-value=0.047  Score=40.60  Aligned_cols=104  Identities=14%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCcc---ccCC------C----CCChhHHhhhhccceE--EEecCCChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQL------P----GESDQEFAEFSSKILH--LKGDRKDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~---~~~~------~----~~~~~~~~~~~~~~~~--~~~D~~~~~~~~~   66 (265)
                      |.|.+|+.+++.|.+.|. ++++++.+.-+.   .++.      .    +.....+.+..+.+++  +...+ +.+.+.+
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~~~~~~~   84 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-DENNLEG   84 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-ChhhHHH
Confidence            569999999999999996 688888876221   1111      0    0012233344444444  33333 3355677


Q ss_pred             HhhccCccEEEEcCCCCccchHHHHHhCC-C-CCcEEEEecceeee
Q 024575           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~-~~~~v~~Ss~~~~~  110 (265)
                      .++  ++|+||.+.. +...-..+.+.+. . ...||+.+....|+
T Consensus        85 ~l~--~~DlVi~~~d-~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~  127 (174)
T cd01487          85 LFG--DCDIVVEAFD-NAETKAMLAESLLGNKNKPVVCASGMAGFG  127 (174)
T ss_pred             Hhc--CCCEEEECCC-CHHHHHHHHHHHHHHCCCCEEEEehhhccC
Confidence            888  9999999943 3333334555554 3 67788776555443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.42  E-value=0.14  Score=36.20  Aligned_cols=104  Identities=15%  Similarity=0.181  Sum_probs=64.4

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceE--EEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|...|. ++.+++.+.-+....-..              .....+.+..+.+++  +..++ +.+...
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~   87 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE   87 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence            679999999999999996 788888765442211111              011233334444443  44444 456677


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.++  ++|+||.+... ......+.+.|+ ..+.+|+.+..+.+|
T Consensus        88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            8887  99999998654 333334555666 667888888765544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.25  E-value=0.11  Score=42.51  Aligned_cols=80  Identities=14%  Similarity=0.235  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|.....                .++..+    ...+++.+++.  ++|+|+.+...
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence            679999999999999999999998864431                111111    13456788888  99999988776


Q ss_pred             CccchHH-----HHHhCCCCCcEEEEec
Q 024575           83 EADEVEP-----ILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~-----l~~~~~~~~~~v~~Ss  105 (265)
                      +.. +..     .++.++....||.++=
T Consensus       201 t~~-T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        201 TPE-TVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CHH-HHHHhHHHHHhcCCCCcEEEECCC
Confidence            433 333     3444554456666653

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.24  E-value=0.027  Score=48.73  Aligned_cols=68  Identities=24%  Similarity=0.310  Sum_probs=47.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +|+++ +|..+++.|++.|++|++.+++......       .....+ ..++.++.+|..+     +...  ++|+||++
T Consensus        11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~-----~~~~--~~d~vv~~   75 (450)
T PRK14106         11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLK-------EALEELGELGIELVLGEYPE-----EFLE--GVDLVVVS   75 (450)
T ss_pred             ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHH-------HHHHHHHhcCCEEEeCCcch-----hHhh--cCCEEEEC
Confidence            47666 9999999999999999999987533110       001111 2367788888765     2334  79999999


Q ss_pred             CCCC
Q 024575           80 NGRE   83 (265)
Q Consensus        80 a~~~   83 (265)
                      ++..
T Consensus        76 ~g~~   79 (450)
T PRK14106         76 PGVP   79 (450)
T ss_pred             CCCC
Confidence            8864

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.24  E-value=0.036  Score=45.95  Aligned_cols=88  Identities=13%  Similarity=0.054  Sum_probs=50.0

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      .||||++|..|++.|.+++|   ++..+...... ...+..          .+......++. +    +.+.  ++|+||
T Consensus        13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~~----------~~~~~~v~~~~-~----~~~~--~~D~vf   74 (344)
T PLN02383         13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVTF----------EGRDYTVEELT-E----DSFD--GVDIAL   74 (344)
T ss_pred             EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeeee----------cCceeEEEeCC-H----HHHc--CCCEEE
Confidence            49999999999999999776   34434332221 111110          12223333332 2    2345  899999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEeccee
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~~  108 (265)
                      .+++..  ....+...+ +...++|=.|+..-
T Consensus        75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR  104 (344)
T PLN02383         75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFR  104 (344)
T ss_pred             ECCCcH--HHHHHHHHHHhCCCEEEECCchhh
Confidence            888653  344444443 34456777777653

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.23  E-value=0.033  Score=52.50  Aligned_cols=69  Identities=16%  Similarity=0.003  Sum_probs=50.7

Q ss_pred             ccccchHHHHHHHHHc-CCe-------------EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHh
Q 024575            3 GTRFIGVFLSRLLVKE-GHQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~-------------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   68 (265)
                      |+|++|+..++.|.+. +++             |.+.+++.....         ++....++++.++.|+.|.+++.+++
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~---------~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK---------ETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH---------HHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4599999999999876 334             666666544421         11111246788999999999999998


Q ss_pred             hccCccEEEEcCCC
Q 024575           69 SAKGFDVVYDINGR   82 (265)
Q Consensus        69 ~~~~~d~vi~~a~~   82 (265)
                      +  ++|+||.+...
T Consensus       647 ~--~~DaVIsalP~  658 (1042)
T PLN02819        647 S--QVDVVISLLPA  658 (1042)
T ss_pred             c--CCCEEEECCCc
Confidence            8  89999999775

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.23  E-value=0.06  Score=44.91  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=25.5

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (265)
                      +||||++|+.+++.|.++. .+++++.++++.
T Consensus         9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          9 LGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            5999999999999999875 488888666544

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.21  E-value=0.037  Score=38.48  Aligned_cols=95  Identities=17%  Similarity=0.146  Sum_probs=52.5

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccce-EEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|++|.+|+.+++.|.+. ++++.++..++....+.+.        ...+++. ....++ +.+.+.  ..  ++|+||.
T Consensus         5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~   71 (122)
T smart00859        5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVS--------EAGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL   71 (122)
T ss_pred             ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHH--------HHCccccccccccc-ccCChh--hc--CCCEEEE
Confidence            488999999999999995 7888888433322111111        0012221 111122 222222  13  8899999


Q ss_pred             cCCCCccch--HHHHHhCCCCCcEEEEeccee
Q 024575           79 INGREADEV--EPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        79 ~a~~~~~~~--~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +.+......  ..+...++..+.+|.+||..-
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~  103 (122)
T smart00859       72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFR  103 (122)
T ss_pred             cCCcHHHHHHHHHHHhhhcCCCEEEECCcccc
Confidence            877542211  123334456678888887654

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.20  E-value=0.042  Score=47.54  Aligned_cols=70  Identities=29%  Similarity=0.396  Sum_probs=52.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|.+.|++|++++++++... .+.        ....++.++.+|.++.+.+.++-- .++|.||-+...
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~-~~~--------~~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~  307 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAE-ELA--------EELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND  307 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHH--------HHCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence            4599999999999999999999998876521 111        112467889999999998865443 289999876654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.20  E-value=0.24  Score=38.92  Aligned_cols=104  Identities=13%  Similarity=0.116  Sum_probs=64.2

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCC--------------CChhHHhhhhccceEEEecC-CChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLKGDR-KDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~D~-~~~~~~~~   66 (265)
                      |.|.+|+.++..|...| -++++++.+.-+....-..              .....+.++.+.+++...+- .+.+.+.+
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~~  110 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELAA  110 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHHH
Confidence            56999999999999998 4777777766442211111              01123344445555444432 24456777


Q ss_pred             HhhccCccEEEEcCCCCccchHH-HHHhCC-CCCcEEEEecceeee
Q 024575           67 SLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~-l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      ++.  ++|+||.+... . .++. +-++|. ..+.+|+.++.+.+|
T Consensus       111 ~~~--~~DlVvd~~D~-~-~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       111 LIA--EHDIVVDCTDN-V-EVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             Hhh--cCCEEEEcCCC-H-HHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            888  99999998754 2 3344 445555 667888877665544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.17  E-value=0.06  Score=44.43  Aligned_cols=93  Identities=20%  Similarity=0.199  Sum_probs=59.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|+..++.+...|+.+++.+.++++.. .+.          ..+... ..|+.+.   +.+.++....++|+|+
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~----------~lGAd~-vi~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK----------ELGADH-VINYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH----------hcCCCE-EEcCCcccHHHHHHHHcCCCCceEEE
Confidence            589999999999999999977777777665522 221          123221 1223332   3344455444799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      ++.|.  ......++.++...+++.+...+
T Consensus       217 D~vG~--~~~~~~l~~l~~~G~lv~ig~~~  244 (326)
T COG0604         217 DTVGG--DTFAASLAALAPGGRLVSIGALS  244 (326)
T ss_pred             ECCCH--HHHHHHHHHhccCCEEEEEecCC
Confidence            99874  44455677777447888777544

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.16  E-value=0.029  Score=49.99  Aligned_cols=69  Identities=12%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|.++|++|++++++++.. +...          ..+...+.+|.+|++.++++-- .++|.++-+.+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~-~~~~----------~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~~  491 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRV-DELR----------ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIPN  491 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHH-HHHH----------HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcCC
Confidence            568999999999999999999999987662 2222          2578999999999998876443 278887766554


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      +
T Consensus       492 ~  492 (558)
T PRK10669        492 G  492 (558)
T ss_pred             h
Confidence            3

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.15  E-value=0.065  Score=42.95  Aligned_cols=63  Identities=17%  Similarity=0.077  Sum_probs=52.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |+|-+|+.++-.+-+.|.+|++++|......-+..             ..-+..|+.|.+.+..+++..++|.|+-
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCCeeee
Confidence            68999999999999999999999999887433322             2235679999999999999999999993

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.13  E-value=0.049  Score=44.28  Aligned_cols=84  Identities=18%  Similarity=0.224  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.++..|...|.+|++.+|++... ....          ..+..++     ..+.+.+.+.  +.|+||++.+.
T Consensus       159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~----------~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~  220 (296)
T PRK08306        159 GFGRTGMTLARTLKALGANVTVGARKSAHL-ARIT----------EMGLSPF-----HLSELAEEVG--KIDIIFNTIPA  220 (296)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHH----------HcCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence            358899999999999999999999986541 1110          1233322     2345667777  89999998753


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      . .-....++.++....+|-+++
T Consensus       221 ~-~i~~~~l~~~~~g~vIIDla~  242 (296)
T PRK08306        221 L-VLTKEVLSKMPPEALIIDLAS  242 (296)
T ss_pred             h-hhhHHHHHcCCCCcEEEEEcc
Confidence            2 123445555664445555554

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.09  E-value=0.019  Score=43.43  Aligned_cols=65  Identities=22%  Similarity=0.058  Sum_probs=43.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|+.++++|.+.||+|+.-+|+.++......+.         .+..      -..-+..++.+  ..|+||-..
T Consensus         6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~---------l~~~------i~~~~~~dA~~--~aDVVvLAV   68 (211)
T COG2085           6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA---------LGPL------ITGGSNEDAAA--LADVVVLAV   68 (211)
T ss_pred             EeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHh---------hccc------cccCChHHHHh--cCCEEEEec
Confidence            489999999999999999999999988777633322210         1111      11122344555  889999876


Q ss_pred             CC
Q 024575           81 GR   82 (265)
Q Consensus        81 ~~   82 (265)
                      .+
T Consensus        69 P~   70 (211)
T COG2085          69 PF   70 (211)
T ss_pred             cH
Confidence            54

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.06  E-value=0.099  Score=40.24  Aligned_cols=104  Identities=12%  Similarity=0.129  Sum_probs=61.4

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC-----C--------CChhHHhhhhccceE--EEecCCChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-----G--------ESDQEFAEFSSKILH--LKGDRKDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-----~--------~~~~~~~~~~~~~~~--~~~D~~~~~~~~~   66 (265)
                      |.|.+|+.+++.|.+.|. ++++++.+.-+....-.     +        ....++.++.+.+++  +...++ .+.+.+
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~~  113 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIEE  113 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHHH
Confidence            569999999999999995 68888877422111000     0        011223333444443  333443 345667


Q ss_pred             HhhccCccEEEEcCCCCccchHHHHHhCC-C-CCcEEEEecceeee
Q 024575           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~-~~~~v~~Ss~~~~~  110 (265)
                      .+.  ++|+||.+.. +...-..+.+.|. . .+.+|+.+...-|+
T Consensus       114 ~~~--~~DvVI~a~D-~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~  156 (212)
T PRK08644        114 LFK--DCDIVVEAFD-NAETKAMLVETVLEHPGKKLVAASGMAGYG  156 (212)
T ss_pred             HHc--CCCEEEECCC-CHHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence            787  8999999943 3333334555555 4 67888887655443

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.02  E-value=0.044  Score=46.83  Aligned_cols=29  Identities=31%  Similarity=0.482  Sum_probs=26.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|..++..|.+.|++|++.++++.+
T Consensus         7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~   35 (411)
T TIGR03026         7 GLGYVGLPLAALLADLGHEVTGVDIDQEK   35 (411)
T ss_pred             CCCchhHHHHHHHHhcCCeEEEEECCHHH
Confidence            67999999999999999999999998776

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.95  E-value=0.33  Score=37.02  Aligned_cols=100  Identities=13%  Similarity=0.152  Sum_probs=57.4

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcC---CCccccCCC--CC--------ChhHHhhhhccc--eEEEecCCChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQLP--GE--------SDQEFAEFSSKI--LHLKGDRKDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~---~~~~~~~~~--~~--------~~~~~~~~~~~~--~~~~~D~~~~~~~~~   66 (265)
                      |.|.+|+.++..|.+.|. ++++.+++   .+...++.-  +.        ....+..+.+.+  +.+..++ +.+.+.+
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i-~~~~~~~  106 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKI-TEENIDK  106 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeC-CHhHHHH
Confidence            458899999999999997 68888887   333222110  00        112223333433  3444454 3466777


Q ss_pred             HhhccCccEEEEcCCCCccchHH-HHHhCC---CCCcEEEEecce
Q 024575           67 SLSAKGFDVVYDINGREADEVEP-ILDALP---NLEQFIYCSSAG  107 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~-l~~~~~---~~~~~v~~Ss~~  107 (265)
                      ++.  ++|+||.+. .+ ..++. +.+.+.   +.+.++..|...
T Consensus       107 ~~~--~~DlVi~a~-Dn-~~~k~~l~~~~~~~~~~~~ii~~~g~~  147 (200)
T TIGR02354       107 FFK--DADIVCEAF-DN-AEAKAMLVNAVLEKYKDKYLIAASGLA  147 (200)
T ss_pred             Hhc--CCCEEEECC-CC-HHHHHHHHHHHHHHcCCCcEEEEeccc
Confidence            888  999999993 33 33443 344443   344455544333

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.93  E-value=0.023  Score=42.50  Aligned_cols=84  Identities=17%  Similarity=0.115  Sum_probs=54.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|++.+|.........           ..++        ...++.+++.  .+|+|+.+...
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-----------~~~~--------~~~~l~ell~--~aDiv~~~~pl  101 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-----------EFGV--------EYVSLDELLA--QADIVSLHLPL  101 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-----------HTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhhhcc-----------cccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence            5799999999999999999999999877621000           0011        2235667787  89999988776


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..    -....++.++....||.++-..
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~  130 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVARGE  130 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSSGG
T ss_pred             ccccceeeeeeeeeccccceEEEeccchh
Confidence            432    1345677777556677666433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.87  E-value=0.06  Score=44.60  Aligned_cols=91  Identities=14%  Similarity=0.182  Sum_probs=57.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh----HHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~d~v   76 (265)
                      +||+|.+|..+++.+...|.+|+++++++++.. .+.        + .-++..+ .|..+.    +.+.+... .++|+|
T Consensus       158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~-~~~--------~-~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v  225 (338)
T cd08295         158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVD-LLK--------N-KLGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY  225 (338)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H-hcCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence            488999999999988888999999888765521 111        0 0122211 222222    22333322 479999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++.|.  ......++.++...+++.++.
T Consensus       226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         226 FDNVGG--KMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence            999874  445667777775567887764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.82  E-value=0.02  Score=46.99  Aligned_cols=88  Identities=9%  Similarity=0.098  Sum_probs=50.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccce--EEEecCCChHHHHHHhhccCccEEEEc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKIL--HLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |+|.+|..++..|+..|++|++.++++..... ........+.... .+..  -....+.-..++.+++.  ++|.|+-+
T Consensus        14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~--~aDlViEa   90 (321)
T PRK07066         14 GSGVIGSGWVARALAHGLDVVAWDPAPGAEAA-LRANVANAWPALERQGLAPGASPARLRFVATIEACVA--DADFIQES   90 (321)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH-HHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc--CCCEEEEC
Confidence            56999999999999999999999998765211 1100000010000 0000  00011111224556777  99999999


Q ss_pred             CCCCccchHHHHHh
Q 024575           80 NGREADEVEPILDA   93 (265)
Q Consensus        80 a~~~~~~~~~l~~~   93 (265)
                      ...+.+--+.++..
T Consensus        91 vpE~l~vK~~lf~~  104 (321)
T PRK07066         91 APEREALKLELHER  104 (321)
T ss_pred             CcCCHHHHHHHHHH
Confidence            87766544444444

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=94.80  E-value=0.16  Score=42.89  Aligned_cols=65  Identities=15%  Similarity=0.039  Sum_probs=50.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |+|..|..+++.+.+.|++|++++.++......+.             -..+..|..|.+.+.++++..++|.|+...
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC-------------ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            36899999999999999999999998765322211             134567888999999988877899998653

This enzyme is an alternative to PurN (TIGR00639)

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.78  E-value=0.016  Score=46.90  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|.+|..++..|++.|++|++.++++..
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293         10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            46999999999999999999999998754

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.76  E-value=0.1  Score=36.53  Aligned_cols=26  Identities=31%  Similarity=0.464  Sum_probs=22.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (265)
                      |.|.+|++|++.|.+.||.|..+..+
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~sr   42 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYSR   42 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence            45999999999999999999888643

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.64  E-value=0.11  Score=36.25  Aligned_cols=90  Identities=19%  Similarity=0.206  Sum_probs=52.5

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhc-----------------------cceEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSS-----------------------KILHLK   55 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~   55 (265)
                      +|+||-||+...+-+.+..  ++|++++-..+..  .+.    +...++.+                       +++++.
T Consensus         4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~--~L~----~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIE--KLA----EQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHH--HHH----HHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHH--HHH----HHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEe
Confidence            5999999999999999876  8999998754431  110    11111111                       222222


Q ss_pred             ecCCChHHHHHHhhccCccEEEEcCCCCccchHHHHHhCCCCCcEE
Q 024575           56 GDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFI  101 (265)
Q Consensus        56 ~D~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v  101 (265)
                          ..+.+.++....++|+|++...- ..+....+.+++..+++-
T Consensus        78 ----G~~~l~~~~~~~~~D~vv~Ai~G-~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   78 ----GPEGLEELAEEPEVDIVVNAIVG-FAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             ----SHHHHHHHHTHTT-SEEEE--SS-GGGHHHHHHHHHTTSEEE
T ss_pred             ----ChHHHHHHhcCCCCCEEEEeCcc-cchHHHHHHHHHCCCeEE
Confidence                24556666666688888876432 456667777766444443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.62  E-value=0.2  Score=41.21  Aligned_cols=92  Identities=12%  Similarity=0.187  Sum_probs=57.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|+++++++++. +.+.          .-++..+ .|..+   ...........++|+|+
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-~~~~----------~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-AYLK----------KLGFDVA-FNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----------HcCCCEE-EeccccccHHHHHHHhCCCCeEEEE
Confidence            48899999999988888899999998876552 1111          1233211 22222   22222222223799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++.|.  ......++.++...+++.++..
T Consensus       213 d~~G~--~~~~~~~~~l~~~G~iv~~G~~  239 (325)
T TIGR02825       213 DNVGG--EFSNTVIGQMKKFGRIAICGAI  239 (325)
T ss_pred             ECCCH--HHHHHHHHHhCcCcEEEEecch
Confidence            99874  3456677778766788877643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.57  E-value=0.11  Score=41.71  Aligned_cols=93  Identities=22%  Similarity=0.239  Sum_probs=55.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCC---CChhHHhhhhccceEEEecCCChHHHHHHhhcc--------
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG---ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------   71 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------   71 (265)
                      |.|-+|..++..|++.||+|++..|++++..+.+..   ..-....+.....+++..=+.|.+.+.+++...        
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~   86 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK   86 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence            578999999999999999999999998883222111   000011112234455555555666666555410        


Q ss_pred             CccEEEEcCCCCccchHHHHHhCC
Q 024575           72 GFDVVYDINGREADEVEPILDALP   95 (265)
Q Consensus        72 ~~d~vi~~a~~~~~~~~~l~~~~~   95 (265)
                      .=.++|++....+..++.+.+.++
T Consensus        87 ~G~i~IDmSTisp~~a~~~a~~~~  110 (286)
T COG2084          87 PGAIVIDMSTISPETARELAAALA  110 (286)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHH
Confidence            124555666666666666666554

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.56  E-value=0.11  Score=42.58  Aligned_cols=86  Identities=19%  Similarity=0.192  Sum_probs=60.0

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (265)
                      .|.+|...++.+...|.+|++++|++++.... .          .-+...+.. .+|++..+.+-+  .+|.|+.+++  
T Consensus       175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~----------~lGAd~~i~-~~~~~~~~~~~~--~~d~ii~tv~--  238 (339)
T COG1064         175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELA-K----------KLGADHVIN-SSDSDALEAVKE--IADAIIDTVG--  238 (339)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHH-H----------HhCCcEEEE-cCCchhhHHhHh--hCcEEEECCC--
Confidence            35788888888777899999999999883211 1          123333332 226666665555  4999999998  


Q ss_pred             ccchHHHHHhCCCCCcEEEEec
Q 024575           84 ADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        84 ~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .......+++++...+++.++-
T Consensus       239 ~~~~~~~l~~l~~~G~~v~vG~  260 (339)
T COG1064         239 PATLEPSLKALRRGGTLVLVGL  260 (339)
T ss_pred             hhhHHHHHHHHhcCCEEEEECC
Confidence            6667778888886678887773

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.53  E-value=0.36  Score=37.63  Aligned_cols=104  Identities=13%  Similarity=0.136  Sum_probs=61.9

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC----------C----CChhHHhhhhccc--eEEEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP----------G----ESDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~----------~----~~~~~~~~~~~~~--~~~~~D~~~~~~~~   65 (265)
                      |.|.+|+++++.|...|. ++++++.+.-+....-.          +    .....+.+..+.+  +.+..++ +.+.+.
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~~  106 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENAE  106 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHHH
Confidence            579999999999999995 67666655432111100          0    0112333334433  3344444 346677


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.+.  ++|+||.+... ...-..+-++|. ....+|+.+..+.+|
T Consensus       107 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757         107 ELIA--GYDLVLDCTDN-FATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             HHHh--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7887  89999998763 333333445565 557888887665544

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.49  E-value=0.15  Score=42.84  Aligned_cols=90  Identities=9%  Similarity=0.066  Sum_probs=59.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|-+|...++.|...|.+|++++|++... +.+.        . ..+ ..+..+..+.+.+.+.+.  +.|+||++++.
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~-~~l~--------~-~~g-~~v~~~~~~~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRL-RQLD--------A-EFG-GRIHTRYSNAYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHH--------H-hcC-ceeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence            458999999999999999999999876542 1110        0 011 123345566778888888  99999999744


Q ss_pred             Cc---c--chHHHHHhCCCCCcEEEEec
Q 024575           83 EA---D--EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~---~--~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ..   .  -....++.++....+|-++.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            21   1  24556666775456776764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.38  E-value=0.018  Score=46.50  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=27.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |.|.+|..++..|+..|++|++.+++++..
T Consensus        12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819         12 GAGQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            459999999999999999999999998773

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.34  E-value=0.063  Score=43.73  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|.+.|++|.+.+|++++
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~   35 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDA   35 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            46899999999999999999999998765

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=94.32  E-value=0.13  Score=43.29  Aligned_cols=61  Identities=18%  Similarity=0.148  Sum_probs=47.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |+|.+|+.++..+.+.|++|++++.++......+             .-..+.+|+.|.+.+.++++  .+|+|..
T Consensus         9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------------ad~~~~~~~~D~~~l~~~a~--~~dvit~   69 (372)
T PRK06019          9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------------ADEVIVADYDDVAALRELAE--QCDVITY   69 (372)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------------CceEEecCCCCHHHHHHHHh--cCCEEEe
Confidence            3489999999999999999999998766532221             12356678999999999998  8898763

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.22  E-value=0.39  Score=37.93  Aligned_cols=102  Identities=16%  Similarity=0.173  Sum_probs=60.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceEE--EecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHL--KGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~D~~~~~~~~   65 (265)
                      |.|.+|+.+++.|+..|. ++++++.+.-+....-..              .....+.+..+.+++.  ...+ +++.+.
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~~  117 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDELA  117 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            459999999999999984 777777655432111000              0112334444555443  3333 345567


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEeccee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~  108 (265)
                      +.+.  ++|+||.+... ...-..+-++|. ..+.+|+.+..+.
T Consensus       118 ~~~~--~~DiVi~~~D~-~~~r~~ln~~~~~~~ip~v~~~~~g~  158 (245)
T PRK05690        118 ALIA--GHDLVLDCTDN-VATRNQLNRACFAAKKPLVSGAAIRM  158 (245)
T ss_pred             HHHh--cCCEEEecCCC-HHHHHHHHHHHHHhCCEEEEeeeccC
Confidence            7788  99999999753 332223445565 5577887665443

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=94.22  E-value=0.074  Score=43.72  Aligned_cols=29  Identities=17%  Similarity=0.090  Sum_probs=24.8

Q ss_pred             CCccccchHHHHHHHHHcCC-------eEEEEEcCC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGK   29 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~   29 (265)
                      +|++|.+|++++..|...+.       +++++++++
T Consensus         9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            58889999999999998773       799998865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=94.19  E-value=0.065  Score=43.42  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|++.|++|++.+|++++
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~   31 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDA   31 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            67999999999999999999999998765

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=94.10  E-value=0.072  Score=43.98  Aligned_cols=89  Identities=16%  Similarity=0.097  Sum_probs=49.3

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||++|..+++.|.++.   .+++.+....+. ...+.-          .+.. +.+.  +.+.  ..+.  ++|+||
T Consensus        10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~~----------~~~~-~~v~--~~~~--~~~~--~~Dvvf   71 (336)
T PRK08040         10 LGATGAVGEALLELLAERQFPVGELYALASEESA-GETLRF----------GGKS-VTVQ--DAAE--FDWS--QAQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEEE----------CCcc-eEEE--eCch--hhcc--CCCEEE
Confidence            4999999999999999953   466666544332 111110          1101 1111  1111  1224  899999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEecceee
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~~~  109 (265)
                      .+++..  ....+...+ +...++|=.|+..-+
T Consensus        72 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fRl  102 (336)
T PRK08040         72 FVAGRE--ASAAYAEEATNAGCLVIDSSGLFAL  102 (336)
T ss_pred             ECCCHH--HHHHHHHHHHHCCCEEEECChHhcC
Confidence            988643  344444443 344467777776543

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.08  E-value=0.25  Score=40.31  Aligned_cols=81  Identities=19%  Similarity=0.106  Sum_probs=54.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|+...                 .++...      ..++.+++.  ++|+|+.+...
T Consensus       129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~  183 (303)
T PRK06436        129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL  183 (303)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence            57999999999887779999999986432                 111100      124667787  89999988766


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EADE----VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~~----~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +...    ....++.++....||.+|...+
T Consensus       184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~  213 (303)
T PRK06436        184 TDETRGMINSKMLSLFRKGLAIINVARADV  213 (303)
T ss_pred             CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            4321    2345666776567777776554

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=94.08  E-value=0.022  Score=40.79  Aligned_cols=31  Identities=23%  Similarity=0.452  Sum_probs=27.1

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +|++|.+|++++..|...+  .+++++++++..
T Consensus         6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~   38 (141)
T PF00056_consen    6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDK   38 (141)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHH
T ss_pred             ECCCChHHHHHHHHHHhCCCCCceEEeccCccc
Confidence            4889999999999999986  689999998654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=94.08  E-value=0.074  Score=43.50  Aligned_cols=71  Identities=18%  Similarity=0.242  Sum_probs=42.6

Q ss_pred             ccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |+|.+|+.++..|+..|  +++++++|++..... +.........-......+..   .+.+    .+.  ++|+||.++
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~-~a~dL~~~~~~~~~~~~i~~---~~~~----~l~--~aDIVIita   76 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEG-EALDLEDALAFLPSPVKIKA---GDYS----DCK--DADIVVITA   76 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhH-hHhhHHHHhhccCCCeEEEc---CCHH----HhC--CCCEEEEcc
Confidence            45999999999999998  689999998776322 11111000000001222221   2222    245  999999999


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      |..
T Consensus        77 g~~   79 (306)
T cd05291          77 GAP   79 (306)
T ss_pred             CCC
Confidence            874

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.08  E-value=0.062  Score=43.60  Aligned_cols=29  Identities=31%  Similarity=0.335  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.++..|++.|++|++.+|++.+
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~   34 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEV   34 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999988755

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=94.05  E-value=0.023  Score=39.16  Aligned_cols=87  Identities=14%  Similarity=0.013  Sum_probs=46.8

Q ss_pred             ccccchHHHHHHHHHc----CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~----g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|+.++++|.+.    +.++.++..+. .......       .....+.       .-..++.+++...++|+||.
T Consensus         1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~-~~~~~~~-------~~~~~~~-------~~~~~~~~~~~~~~~dvvVE   65 (117)
T PF03447_consen    1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRS-MLISKDW-------AASFPDE-------AFTTDLEELIDDPDIDVVVE   65 (117)
T ss_dssp             --SHHHHHHHHHHHHTHHHCEEEEEEEEESS-EEEETTH-------HHHHTHS-------CEESSHHHHHTHTT-SEEEE
T ss_pred             CCCHHHHHHHHHHHhCcccCCEEEEEEEECC-chhhhhh-------hhhcccc-------cccCCHHHHhcCcCCCEEEE
Confidence            6799999999999986    56777777665 2111100       0000111       11123345555447999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |++. ......+.++++..+++|..|-
T Consensus        66 ~t~~-~~~~~~~~~~L~~G~~VVt~nk   91 (117)
T PF03447_consen   66 CTSS-EAVAEYYEKALERGKHVVTANK   91 (117)
T ss_dssp             -SSC-HHHHHHHHHHHHTTCEEEES-H
T ss_pred             CCCc-hHHHHHHHHHHHCCCeEEEECH
Confidence            9553 2333445556677778887774

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.02  E-value=0.57  Score=35.60  Aligned_cols=103  Identities=17%  Similarity=0.148  Sum_probs=60.9

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceE--EEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~D~~~~~~~~   65 (265)
                      |.|.+|..+++.|...|. ++++++.+.-+....-..              .....+.++.+.+++  +...++  +...
T Consensus        28 G~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~~~  105 (197)
T cd01492          28 GLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EKPE  105 (197)
T ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--ccHH
Confidence            345699999999999995 688887765432111110              011223444454443  333343  2234


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.++  ++|+||.+.. +......+-+.|+ ....+|+.++.+.+|
T Consensus       106 ~~~~--~~dvVi~~~~-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G  148 (197)
T cd01492         106 EFFS--QFDVVVATEL-SRAELVKINELCRKLGVKFYATGVHGLFG  148 (197)
T ss_pred             HHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence            5566  8999998754 3333444555566 556888888877665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=94.00  E-value=0.17  Score=41.70  Aligned_cols=61  Identities=15%  Similarity=0.150  Sum_probs=49.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|++|+-++....+.|++|++++-+++....+..             -..+.++.+|.+.+.++.+  ++|+|-.
T Consensus         8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT~   68 (375)
T COG0026           8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVITY   68 (375)
T ss_pred             cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEEE
Confidence            56999999999999999999999988777544332             2356677789999999999  9999873

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=93.94  E-value=0.22  Score=43.00  Aligned_cols=64  Identities=11%  Similarity=0.036  Sum_probs=45.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh-ccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~~~d~vi~~a~   81 (265)
                      .||.+|.+|++.+..+|++|++++-...-   ..           ..+++++.++  ..+++.+.+. ....|++|++|+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---~~-----------p~~v~~i~V~--ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL---AD-----------PQGVKVIHVE--SARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCC---CC-----------CCCceEEEec--CHHHHHHHHHhhCCCCEEEEecc
Confidence            58999999999999999999999854321   01           2466666553  4555444443 235799999998


Q ss_pred             C
Q 024575           82 R   82 (265)
Q Consensus        82 ~   82 (265)
                      .
T Consensus       344 V  344 (475)
T PRK13982        344 V  344 (475)
T ss_pred             c
Confidence            6

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=93.92  E-value=0.44  Score=39.12  Aligned_cols=91  Identities=15%  Similarity=0.246  Sum_probs=57.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|+++++++++. +.+.          .-++..+ .|..++   +.+.+... .++|+|+
T Consensus       150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~----------~~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl  216 (329)
T cd08294         150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLK----------ELGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF  216 (329)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----------HcCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence            48899999999998888899999998876552 1111          1222211 233322   23333332 4799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++.+.  ......++.++...+++.++..
T Consensus       217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         217 DNVGG--EFSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             ECCCH--HHHHHHHHhhccCCEEEEEcch
Confidence            99874  4455666777755678877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=93.90  E-value=0.26  Score=40.40  Aligned_cols=89  Identities=19%  Similarity=0.225  Sum_probs=55.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh-ccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~~~d~vi~~   79 (265)
                      +||+|.+|.++++.+...|.+|+++++++... +.+.+          .+...+ .|..+   +.+.+. ..++|+++++
T Consensus       169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~----------~~~~~~-~~~~~---~~~~~~~~~~~d~v~~~  233 (332)
T cd08259         169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-KILKE----------LGADYV-IDGSK---FSEDVKKLGGADVVIEL  233 (332)
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHH----------cCCcEE-EecHH---HHHHHHhccCCCEEEEC
Confidence            48999999999999999999999998876542 11110          111111 12211   222222 1279999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++..  .....++.+....+++.++..
T Consensus       234 ~g~~--~~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         234 VGSP--TIEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             CChH--HHHHHHHHhhcCCEEEEEcCC
Confidence            8753  355566666655678877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08328 hypothetical protein; Provisional

Probab=93.83  E-value=0.86  Score=35.62  Aligned_cols=104  Identities=18%  Similarity=0.229  Sum_probs=63.8

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCC------CCCh---------hHHhhhhccceE--EEecCCChHHH
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLP------GESD---------QEFAEFSSKILH--LKGDRKDYDFV   64 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~------~~~~---------~~~~~~~~~~~~--~~~D~~~~~~~   64 (265)
                      |.|.+|++++..|...| .++++++.+.-+....-.      +...         ..+.+..+.+.+  +...+ +++.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~  112 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI  112 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence            56999999999999998 477777766543211110      0011         122333444443  33334 44557


Q ss_pred             HHHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeeec
Q 024575           65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK  111 (265)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~~  111 (265)
                      .++++  ++|+||.+... . .++.++ ++|+ ....+|+.++.+.+|.
T Consensus       113 ~~~l~--~~D~Vid~~d~-~-~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        113 DEVLK--GVDVIVDCLDN-F-ETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             HHHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            77888  89999998754 2 344444 3455 6678998888777664

>PLN02494 adenosylhomocysteinase

Probab=93.83  E-value=0.26  Score=42.43  Aligned_cols=82  Identities=13%  Similarity=0.048  Sum_probs=55.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.+...|.+|+++.+++.......           ..++..+        .+.+++.  ..|+||.+.+.
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv--------~leEal~--~ADVVI~tTGt  319 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL--------TLEDVVS--EADIFVTTTGN  319 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec--------cHHHHHh--hCCEEEECCCC
Confidence            5799999999999989999999988876522111           1233321        1345666  88999987765


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ...-....++.++....++.++.
T Consensus       320 ~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        320 KDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ccchHHHHHhcCCCCCEEEEcCC
Confidence            33334567777886667777764

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.83  E-value=0.098  Score=43.31  Aligned_cols=89  Identities=18%  Similarity=0.203  Sum_probs=49.9

Q ss_pred             CCccccchHHHHHHHHHc-CCe---EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.+++.|.++ .++   +..+....+. ...+.          ..+-....-++ +++.    +.  ++|+|
T Consensus        11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~----------~~~~~l~v~~~-~~~~----~~--~~Div   72 (347)
T PRK06728         11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQ----------FKGREIIIQEA-KINS----FE--GVDIA   72 (347)
T ss_pred             EeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCee----------eCCcceEEEeC-CHHH----hc--CCCEE
Confidence            499999999999999964 566   5555544322 11111          01112222222 3332    34  89999


Q ss_pred             EEcCCCCccchHHHHHhC-CCCCcEEEEecceee
Q 024575           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~~~  109 (265)
                      |.+++..  ....+...+ +....+|=.|+..-+
T Consensus        73 f~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR~  104 (347)
T PRK06728         73 FFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYRM  104 (347)
T ss_pred             EECCChH--HHHHHHHHHHHCCCEEEECchhhcC
Confidence            9988643  444455443 344567767765543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.80  E-value=0.029  Score=45.42  Aligned_cols=29  Identities=21%  Similarity=0.304  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|++.|++|++.+++++.
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~   36 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQ   36 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            45999999999999999999999998766

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.79  E-value=0.19  Score=42.82  Aligned_cols=82  Identities=11%  Similarity=0.017  Sum_probs=52.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.++..|...|.+|++..+++.+.....           ..++.+.     +   +.+++.  +.|+||.+.|.
T Consensus       219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence            4699999999999999999999998876521111           1233321     1   345666  89999998764


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ...-....++.++....++.++.
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~  300 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGH  300 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCC
Confidence            22112245555665556666654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=93.73  E-value=0.032  Score=40.52  Aligned_cols=67  Identities=13%  Similarity=0.097  Sum_probs=41.8

Q ss_pred             CccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |+ |.+|..+++.|.+.| ++|++.+|++..... +.+       .  .+...+..+..+.+   +.+.  ++|+||.+.
T Consensus        26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~-~~~-------~--~~~~~~~~~~~~~~---~~~~--~~Dvvi~~~   89 (155)
T cd01065          26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKA-LAE-------R--FGELGIAIAYLDLE---ELLA--EADLIINTT   89 (155)
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH-HHH-------H--Hhhcccceeecchh---hccc--cCCEEEeCc
Confidence            54 899999999999985 889999987655211 110       0  11111122333333   3355  899999998


Q ss_pred             CCCc
Q 024575           81 GREA   84 (265)
Q Consensus        81 ~~~~   84 (265)
                      ....
T Consensus        90 ~~~~   93 (155)
T cd01065          90 PVGM   93 (155)
T ss_pred             CCCC
Confidence            7654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=93.70  E-value=0.16  Score=48.18  Aligned_cols=139  Identities=14%  Similarity=0.172  Sum_probs=79.3

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccce--EEEecCCChHHHHHHhhc----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL--HLKGDRKDYDFVKSSLSA----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~----~~~   73 (265)
                      +||-|.-|-.|+++|.++|. .+++.+|+--+.  -+....-.+|.  ..++.  +-.-|++..+...+++++    .-+
T Consensus      1774 ~GGLGGFGLELaqWLi~RGar~lVLtSRsGirt--GYQa~~vrrWr--~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~v 1849 (2376)
T KOG1202|consen 1774 VGGLGGFGLELAQWLIQRGARKLVLTSRSGIRT--GYQALMVRRWR--RRGVQVQVSTSNITTAEGARGLIEESNKLGPV 1849 (2376)
T ss_pred             eccccchhHHHHHHHHhcCceEEEEeccccchh--hHHHHHHHHHH--hcCeEEEEecccchhhhhHHHHHHHhhhcccc
Confidence            58999999999999999996 555555654432  11111112222  13443  334566655555566653    146


Q ss_pred             cEEEEcCCCCcc------chHHHHHh------------------CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           74 DVVYDINGREAD------EVEPILDA------------------LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        74 d~vi~~a~~~~~------~~~~l~~~------------------~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      -.|||+|..-.+      ..+++-+.                  |...+.||.+||.+. |..         .....+|.
T Consensus      1850 GGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvsc-GRG---------N~GQtNYG 1919 (2376)
T KOG1202|consen 1850 GGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSC-GRG---------NAGQTNYG 1919 (2376)
T ss_pred             cchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecc-cCC---------CCcccccc
Confidence            778888765211      11222111                  224567888888653 211         12234455


Q ss_pred             cchhhHHHHHh---hcCCceeEeecce
Q 024575          130 KGKLNTESVLE---SKGVNWTSLRPVY  153 (265)
Q Consensus       130 ~~k~~~E~~~~---~~~~~~~i~r~~~  153 (265)
                      .+...+|+++.   ..|++-+.+.-|-
T Consensus      1920 ~aNS~MERiceqRr~~GfPG~AiQWGA 1946 (2376)
T KOG1202|consen 1920 LANSAMERICEQRRHEGFPGTAIQWGA 1946 (2376)
T ss_pred             hhhHHHHHHHHHhhhcCCCcceeeeec
Confidence            78889999984   3577777666553

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.68  E-value=0.14  Score=41.81  Aligned_cols=75  Identities=16%  Similarity=0.121  Sum_probs=46.9

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      .||||++|..|++.|.++. .++..+..+..+                         ++.+.   ...+.  ++|+||.+
T Consensus         8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------------~~~~~---~~~~~--~~DvvFla   57 (313)
T PRK11863          8 DGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------------DAAAR---RELLN--AADVAILC   57 (313)
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------------cccCc---hhhhc--CCCEEEEC
Confidence            4999999999999999986 366666544322                         11111   13344  79999988


Q ss_pred             CCCCccchHHHHHhC-CCCCcEEEEecce
Q 024575           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (265)
Q Consensus        80 a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~  107 (265)
                      .+.  .....+...+ +...++|=.|+..
T Consensus        58 lp~--~~s~~~~~~~~~~g~~VIDlSadf   84 (313)
T PRK11863         58 LPD--DAAREAVALIDNPATRVIDASTAH   84 (313)
T ss_pred             CCH--HHHHHHHHHHHhCCCEEEECChhh
Confidence            753  2334444444 3445688777755

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=93.67  E-value=0.053  Score=41.99  Aligned_cols=31  Identities=29%  Similarity=0.343  Sum_probs=27.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +||+|.+|+.++..|.+.|++|.+.+|++++
T Consensus         6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            3789999999999999999999999988655

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=93.67  E-value=0.13  Score=41.91  Aligned_cols=78  Identities=14%  Similarity=0.177  Sum_probs=41.7

Q ss_pred             CCccccchHHHHHHHHHcCC--e-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--Q-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||.+|+.+++.|.++.+  . +.++....+. ...              ..++..-.+.-++...+.....++|++|
T Consensus         7 vGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSa-G~~--------------~~~f~~~~~~v~~~~~~~~~~~~~Divf   71 (334)
T COG0136           7 LGATGAVGQVLLELLEERHFPFEELVLLASARSA-GKK--------------YIEFGGKSIGVPEDAADEFVFSDVDIVF   71 (334)
T ss_pred             EeccchHHHHHHHHHHhcCCCcceEEEEeccccc-CCc--------------cccccCccccCccccccccccccCCEEE
Confidence            49999999999999999643  2 3333332222 111              1222221122222222222222899999


Q ss_pred             EcCCCCccchHHHHHhCC
Q 024575           78 DINGREADEVEPILDALP   95 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~   95 (265)
                      .++|....  +.+...+.
T Consensus        72 ~~ag~~~s--~~~~p~~~   87 (334)
T COG0136          72 FAAGGSVS--KEVEPKAA   87 (334)
T ss_pred             EeCchHHH--HHHHHHHH
Confidence            99986444  45554444

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.65  E-value=0.083  Score=47.47  Aligned_cols=80  Identities=13%  Similarity=0.235  Sum_probs=58.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |-|.+|+.+++.|.++|+++++++++++.. +...          ..+...+.+|.++++.++++=- .+.|.++-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v-~~~~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vv~~~~d  474 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAV-NLMR----------KYGYKVYYGDATQLELLRAAGA-EKAEAIVITCNE  474 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHH-HHHH----------hCCCeEEEeeCCCHHHHHhcCC-ccCCEEEEEeCC
Confidence            568999999999999999999999987762 2222          2578899999999998886533 288988877665


Q ss_pred             CccchHHHHHhCC
Q 024575           83 EADEVEPILDALP   95 (265)
Q Consensus        83 ~~~~~~~l~~~~~   95 (265)
                      . .....++..++
T Consensus       475 ~-~~n~~i~~~~r  486 (601)
T PRK03659        475 P-EDTMKIVELCQ  486 (601)
T ss_pred             H-HHHHHHHHHHH
Confidence            3 23333444444

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=93.63  E-value=0.17  Score=41.18  Aligned_cols=75  Identities=13%  Similarity=0.063  Sum_probs=46.9

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      .|||||.|..|++.|.++. .++..++-+...                         +..+   ..++++  ++|++|.+
T Consensus         7 vGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------------~~~~---~~~~~~--~~D~vFla   56 (310)
T TIGR01851         7 DGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------------DAAE---RAKLLN--AADVAILC   56 (310)
T ss_pred             ECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------------CcCC---HhHhhc--CCCEEEEC
Confidence            4999999999999999985 466666433211                         0111   224455  89999988


Q ss_pred             CCCCccchHHHHHhC-CCCCcEEEEecce
Q 024575           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (265)
Q Consensus        80 a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~  107 (265)
                      .+..  ....++..+ +...++|=+|+..
T Consensus        57 lp~~--~s~~~~~~~~~~g~~VIDlSadf   83 (310)
T TIGR01851        57 LPDD--AAREAVSLVDNPNTCIIDASTAY   83 (310)
T ss_pred             CCHH--HHHHHHHHHHhCCCEEEECChHH
Confidence            7542  334444444 3445677777654

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK08223 hypothetical protein; Validated

Probab=93.53  E-value=0.78  Score=36.96  Aligned_cols=105  Identities=11%  Similarity=-0.011  Sum_probs=63.2

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCC--------------CChhHHhhhhccceEEE--ecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLK--GDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|+..| -++++++.+.-+....-..              .....+.++.+.+++..  ..+ +++...
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l-~~~n~~  112 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGI-GKENAD  112 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEeccc-CccCHH
Confidence            56899999999999998 4777777765432111000              11234444456555443  334 345567


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +++.  ++|+|+++.-.....++.++ ++|. ..+.+|+.+..+..|
T Consensus       113 ~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g~~g  157 (287)
T PRK08223        113 AFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLGMGT  157 (287)
T ss_pred             HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccCCeE
Confidence            7888  99999977533212344444 4566 567888876554433

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=93.52  E-value=0.17  Score=42.04  Aligned_cols=30  Identities=20%  Similarity=0.365  Sum_probs=24.6

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCC
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKA   30 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~   30 (265)
                      +|+||++|+.|++.|.+++ .++..+..+..
T Consensus         6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~~   36 (341)
T TIGR00978         6 LGATGLVGQKFVKLLAKHPYFELAKVVASPR   36 (341)
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEEEChh
Confidence            5999999999999998876 68888855443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=93.46  E-value=0.087  Score=46.18  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=26.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|.+|..++..|++.|++|++.+++++.
T Consensus        11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~   39 (495)
T PRK07531         11 GGGVIGGGWAARFLLAGIDVAVFDPHPEA   39 (495)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            57999999999999999999999998766

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=93.39  E-value=0.68  Score=36.56  Aligned_cols=76  Identities=18%  Similarity=0.087  Sum_probs=58.6

Q ss_pred             chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC-Ccc
Q 024575            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR-EAD   85 (265)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~-~~~   85 (265)
                      =|+.+++.|.+.|++|++.+-.+...   ..          ..++.++.+-+.+.+.+.+.+.+.+++.||+..-. ...
T Consensus        13 egr~la~~L~~~g~~v~~Svat~~g~---~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~   79 (248)
T PRK08057         13 EARALARALAAAGVDIVLSLAGRTGG---PA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQ   79 (248)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccCCCC---cc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence            38899999999999888877766442   11          25777888888899999999999999999998654 344


Q ss_pred             chHHHHHhCC
Q 024575           86 EVEPILDALP   95 (265)
Q Consensus        86 ~~~~l~~~~~   95 (265)
                      -..++.++|+
T Consensus        80 is~~a~~ac~   89 (248)
T PRK08057         80 ISANAAAACR   89 (248)
T ss_pred             HHHHHHHHHH
Confidence            4567777776

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.38  E-value=0.19  Score=35.07  Aligned_cols=87  Identities=18%  Similarity=0.253  Sum_probs=56.9

Q ss_pred             chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEEEEcCCCC
Q 024575            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~vi~~a~~~   83 (265)
                      +|...++.+...|.+|+++++++.+. +.+.          .-++..+ .|..+   .+.+.++....++|+||+|.|. 
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~----------~~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~-   68 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKL-ELAK----------ELGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS-   68 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHH-HHHH----------HTTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHH-HHHH----------hhccccc-ccccccccccccccccccccceEEEEecCc-
Confidence            68888888888899999999987662 1111          1233333 34433   3445555553479999999984 


Q ss_pred             ccchHHHHHhCCCCCcEEEEecc
Q 024575           84 ADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        84 ~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      .......++.++...+++.++..
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~~   91 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGVY   91 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESST
T ss_pred             HHHHHHHHHHhccCCEEEEEEcc
Confidence            34556667777755677777743

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=93.35  E-value=0.28  Score=40.23  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=25.5

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK   29 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~   29 (265)
                      +|+||++|..++..|+..|+  +|++++|++
T Consensus         6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           6 IGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            48899999999999999885  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=93.33  E-value=0.17  Score=42.16  Aligned_cols=71  Identities=24%  Similarity=0.206  Sum_probs=44.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh--ccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~d~vi~   78 (265)
                      .||+|.+|++.++.+...+..+++.+++.++ .+..++          -+.. .-.|+.+++..+...+  ..++|+|++
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~----------lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVlD  231 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKK----------LGAD-EVVDYKDENVVELIKKYTGKGVDVVLD  231 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHH----------cCCc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence            4899999999999888888445555555444 111111          1221 2356667555544444  347999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      |.+..
T Consensus       232 ~vg~~  236 (347)
T KOG1198|consen  232 CVGGS  236 (347)
T ss_pred             CCCCC
Confidence            99875

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.31  E-value=0.27  Score=41.83  Aligned_cols=81  Identities=10%  Similarity=0.023  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|..++..+...|.+|+++.+++.+.....           ..++..+     +   +.+++.  +.|+||.+.|.
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-----------~~G~~~~-----~---~~e~v~--~aDVVI~atG~  267 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-----------MEGYEVM-----T---MEEAVK--EGDIFVTTTGN  267 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-----------hcCCEEc-----c---HHHHHc--CCCEEEECCCC
Confidence            5699999999999999999999888766521111           1344322     1   124555  88999999875


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 024575           83 EADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      ...-....++.++....++.++
T Consensus       268 ~~~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         268 KDIITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             HHHHHHHHHhcCCCCcEEEEeC
Confidence            3322233466777666777777

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.31  E-value=0.21  Score=41.38  Aligned_cols=84  Identities=18%  Similarity=0.146  Sum_probs=55.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|......  ..          ..++        ...++.+++.  +.|+|+.+...
T Consensus       157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~----------~~~~--------~~~~l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EK----------ELGA--------EYRPLEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HH----------HcCC--------EecCHHHHHh--hCCEEEEeCCC
Confidence            5699999999999999999999988654310  00          0111        1124667787  89999988765


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EADE----VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~~----~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +...    ....++.++....||.+|...+
T Consensus       215 t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        215 TKETYHMINEERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             ChHHhhccCHHHHhcCCCCeEEEECcCchh
Confidence            4321    1245566666667777776554

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=93.30  E-value=0.98  Score=36.10  Aligned_cols=103  Identities=17%  Similarity=0.173  Sum_probs=62.3

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCC------C--------CChhHHhhhhccceEEEec-CCChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLP------G--------ESDQEFAEFSSKILHLKGD-RKDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~------~--------~~~~~~~~~~~~~~~~~~D-~~~~~~~~~   66 (265)
                      |.|.+|+++++.|++.| -++++++.+.-.....-.      +        .....+..+.+.+++...+ ..+++...+
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~  116 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE  116 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence            56899999999999999 688888876543211111      1        1123334444555444332 334566666


Q ss_pred             HhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecce
Q 024575           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~  107 (265)
                      ++. .++|+||.+... ...-..+.+.|+ ....+|.+.+.+
T Consensus       117 ll~-~~~D~VIdaiD~-~~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        117 YMS-AGFSYVIDAIDS-VRPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEECCcc
Confidence            663 279999999764 233345666777 556777665544

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.29  E-value=0.62  Score=38.28  Aligned_cols=91  Identities=19%  Similarity=0.191  Sum_probs=56.7

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEEE
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi~   78 (265)
                      ||+|.+|..+++.+...|.+|+++++++.+. +.+.          .-++..+ .|..+.   +.+.+.....++|++|+
T Consensus       151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~-~~~~----------~~g~~~~-i~~~~~~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         151 AAASALGRMLVRLCKADGIKVINIVRRKEQV-DLLK----------KIGAEYV-LNSSDPDFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----------HcCCcEE-EECCCccHHHHHHHHhCCCCCcEEEE
Confidence            7899999999988888899999988876552 1111          1122211 122222   33444444347999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +.|.  ......++.++...+++.++..
T Consensus       219 ~~g~--~~~~~~~~~l~~~G~~v~~g~~  244 (324)
T cd08291         219 AVGG--GLTGQILLAMPYGSTLYVYGYL  244 (324)
T ss_pred             CCCc--HHHHHHHHhhCCCCEEEEEEec
Confidence            9874  3345566667755677777643

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=93.24  E-value=0.45  Score=39.11  Aligned_cols=93  Identities=19%  Similarity=0.216  Sum_probs=59.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (265)
                      +|+++.+|..+++.+...|.+|+++++++... ..+.        .  .+.. ...|..+.+.   +.+.....++|.++
T Consensus       173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~--------~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKL-ERAK--------E--LGAD-YVIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH--------H--cCCC-eEEecCChHHHHHHHHHhCCCCCcEEE
Confidence            48889999999999999999999988876542 1111        0  1111 1234444333   33333334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      ++++.  ......++.++...+++.+++..
T Consensus       241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~  268 (342)
T cd08266         241 EHVGA--ATWEKSLKSLARGGRLVTCGATT  268 (342)
T ss_pred             ECCcH--HHHHHHHHHhhcCCEEEEEecCC
Confidence            99874  34555666666556788887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=93.21  E-value=0.44  Score=39.94  Aligned_cols=88  Identities=15%  Similarity=0.146  Sum_probs=55.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|..+++.+...|.+|++++.++.+......          .-++..+ .|..+.+.+.+...  ++|+||.+.|.
T Consensus       191 G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~----------~~Ga~~v-i~~~~~~~~~~~~~--~~D~vid~~g~  257 (360)
T PLN02586        191 GLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN----------RLGADSF-LVSTDPEKMKAAIG--TMDYIIDTVSA  257 (360)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH----------hCCCcEE-EcCCCHHHHHhhcC--CCCEEEECCCC
Confidence            56999999999888889999888776554211111          1233222 23334445555444  79999999883


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 024575           83 EADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                       .......++.++...+++.++
T Consensus       258 -~~~~~~~~~~l~~~G~iv~vG  278 (360)
T PLN02586        258 -VHALGPLLGLLKVNGKLITLG  278 (360)
T ss_pred             -HHHHHHHHHHhcCCcEEEEeC
Confidence             224455677777556788776

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.19  E-value=0.076  Score=45.72  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +||+|.+|..+++.|.+.|++|++.+|++..
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            3789999999999999999999999998654

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=93.17  E-value=0.11  Score=42.23  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|++.|++|++.+|++++
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~   36 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQA   36 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998765

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=93.16  E-value=0.3  Score=39.96  Aligned_cols=92  Identities=24%  Similarity=0.222  Sum_probs=58.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (265)
                      .|++|.+|..+++.+...|.+|+++++++.+.. .+.          .-++..+ .|..+. ....+.....++|.|+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQAD-YLK----------SLGASEV-LDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------hcCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence            478899999999888888999999988765521 111          1222221 222222 223333443479999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      .+.  ......++.++...+++.++..
T Consensus       221 ~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (325)
T cd05280         221 VGG--DVLANLLKQTKYGGVVASCGNA  245 (325)
T ss_pred             Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence            774  3566677777755678877753

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.12  E-value=0.97  Score=38.20  Aligned_cols=103  Identities=16%  Similarity=0.079  Sum_probs=61.9

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC--------------CCChhHHhhhhccceEEE--ecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP--------------GESDQEFAEFSSKILHLK--GDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~--~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|...|. ++++++++.-.....-.              +.....+.+..+.+++..  ..+ +.+.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence            568999999999999995 78888877422111000              001123333345444333  233 345667


Q ss_pred             HHhhccCccEEEEcCCCCccchHH-HHHhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +++.  ++|+||++....  .++. +-++|. ....+|+.+..+.+|
T Consensus       221 ~~~~--~~D~Vv~~~d~~--~~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        221 ALLQ--DVDVVVDGADNF--PTRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             HHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  899999997642  2333 445566 667888887655444

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=93.09  E-value=0.54  Score=38.56  Aligned_cols=91  Identities=16%  Similarity=0.120  Sum_probs=57.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vi~   78 (265)
                      .|++|.+|..+++.+...|.+|+++++++.+.. .+.          ..++..+ .|..+  .+.+.+. ...++|.|++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld  219 (326)
T cd08289         153 TGATGGVGSLAVSILAKLGYEVVASTGKADAAD-YLK----------KLGAKEV-IPREELQEESIKPL-EKQRWAGAVD  219 (326)
T ss_pred             EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHH-HHH----------HcCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence            478899999999999889999999988876521 111          1222211 12222  2333333 3347999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +.+.  ......+..++...+++.++..
T Consensus       220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         220 PVGG--KTLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence            9874  3455667777766688887743

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08293 PTGR2 Prostaglandin reductase

Probab=93.09  E-value=0.32  Score=40.30  Aligned_cols=92  Identities=15%  Similarity=0.182  Sum_probs=57.4

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~v   76 (265)
                      +||+|.+|..+++.+...|. +|+++++++++.. .+.        . .-++..+ .|..+   .+.+.++.. .++|+|
T Consensus       161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~-~~~--------~-~lGa~~v-i~~~~~~~~~~i~~~~~-~gvd~v  228 (345)
T cd08293         161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQ-LLK--------S-ELGFDAA-INYKTDNVAERLRELCP-EGVDVY  228 (345)
T ss_pred             ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHH--------H-hcCCcEE-EECCCCCHHHHHHHHCC-CCceEE
Confidence            48899999999988888898 7999988765421 110        0 0122221 22222   223333322 479999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      |++.+..  .....++.++...+++.++..
T Consensus       229 id~~g~~--~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         229 FDNVGGE--ISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             EECCCcH--HHHHHHHHhccCCEEEEEeee
Confidence            9998753  346677777766678877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.08  E-value=0.99  Score=37.80  Aligned_cols=103  Identities=12%  Similarity=0.084  Sum_probs=62.9

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceEE--EecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHL--KGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|...|. ++++++.+.-+....-..              .....+.+..+.+++.  ...++ .+...
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~~  113 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNAL  113 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHHH
Confidence            569999999999999984 777777765332111110              0112334445555443  34443 45566


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.+.  ++|+||.+...  ..++.++ ++|. ....||+.+..+.+|
T Consensus       114 ~~~~--~~DvVvd~~d~--~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        114 DELR--DADVILDGSDN--FDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            7787  99999999753  2333333 4455 567788877655554

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.06  E-value=0.2  Score=42.29  Aligned_cols=29  Identities=24%  Similarity=0.558  Sum_probs=26.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~   29 (265)
                      +||.|.+|..++..|.+.|++|++.+|++
T Consensus       104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199        104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999864

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=92.99  E-value=0.2  Score=41.85  Aligned_cols=88  Identities=19%  Similarity=0.262  Sum_probs=47.4

Q ss_pred             CCccccchHHHHHHHHHc-CCe---EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.+++.|+++ .++   ++.++.....  .....         -.+-.....+..+++.    +.  ++|+|
T Consensus         7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg--~~~~~---------f~g~~~~v~~~~~~~~----~~--~~Div   69 (369)
T PRK06598          7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG--GAAPS---------FGGKEGTLQDAFDIDA----LK--KLDII   69 (369)
T ss_pred             EeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC--Ccccc---------cCCCcceEEecCChhH----hc--CCCEE
Confidence            499999999999966665 565   6665554222  11111         0111222233333333    34  89999


Q ss_pred             EEcCCCCccchHHHHHhC-C-CCC-cEEEEecce
Q 024575           77 YDINGREADEVEPILDAL-P-NLE-QFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~-~-~~~-~~v~~Ss~~  107 (265)
                      |.+++..  ....+...+ + +.+ .+|=.||..
T Consensus        70 f~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~f  101 (369)
T PRK06598         70 ITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTL  101 (369)
T ss_pred             EECCCHH--HHHHHHHHHHhCCCCeEEEECChHH
Confidence            9988643  344444443 3 332 355556544

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=92.96  E-value=0.47  Score=38.68  Aligned_cols=115  Identities=13%  Similarity=0.122  Sum_probs=70.2

Q ss_pred             cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCCCcc
Q 024575            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREAD   85 (265)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~~~   85 (265)
                      |-|+.+++.|++.||+|++..|+.........    ..+.  ..++..       .++..++.+  +.|+||-+... ..
T Consensus        30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~----e~La--eaGA~~-------AaS~aEAAa--~ADVVIL~LPd-~a   93 (341)
T TIGR01724        30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLW----KKVE--DAGVKV-------VSDDKEAAK--HGEIHVLFTPF-GK   93 (341)
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhh----HHHH--HCCCee-------cCCHHHHHh--CCCEEEEecCC-HH
Confidence            67999999999999999999987654211000    0000  123332       123456676  89999988763 33


Q ss_pred             chHH----HHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHh--hcCCceeEeecceeeC
Q 024575           86 EVEP----ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYG  156 (265)
Q Consensus        86 ~~~~----l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~--~~~~~~~i~r~~~i~g  156 (265)
                      ....    ++..+...+-+|-+||...                    -......|..|+  +..+.+....|+.|=|
T Consensus        94 aV~eVl~GLaa~L~~GaIVID~STIsP--------------------~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~  150 (341)
T TIGR01724        94 GTFSIARTIIEHVPENAVICNTCTVSP--------------------VVLYYSLEKILRLKRTDVGISSMHPAAVPG  150 (341)
T ss_pred             HHHHHHHHHHhcCCCCCEEEECCCCCH--------------------HHHHHHHHHHhhcCccccCeeccCCCCCCC
Confidence            3333    3444554566777776542                    112345555554  4578889999988766

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=92.93  E-value=0.42  Score=41.27  Aligned_cols=81  Identities=11%  Similarity=-0.020  Sum_probs=53.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |-|.+|+.+++.|...|.+|++..+++.......           ..++...        .+.++++  ..|+|+.+.+.
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt  319 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN  319 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence            4689999999999999999999888765521110           1233221        2456677  89999988764


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 024575           83 EADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      ...-....++.++....++.++
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvG  341 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIG  341 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcC
Confidence            2222345667777555666665

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=92.91  E-value=0.74  Score=37.65  Aligned_cols=91  Identities=19%  Similarity=0.183  Sum_probs=58.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (265)
                      .|++|.+|..+++.+...|.+|++++++..+.. .+.        .  .++..+ .+..+   .+.+.+.....++|+|+
T Consensus       146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~-~~~--------~--~g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~  213 (324)
T cd08292         146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVA-ELR--------A--LGIGPV-VSTEQPGWQDKVREAAGGAPISVAL  213 (324)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCHHHHH-HHH--------h--cCCCEE-EcCCCchHHHHHHHHhCCCCCcEEE
Confidence            488999999999999999999999988765521 111        1  122211 12222   23344454445799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++.+..  .....++.++...+|+.++.
T Consensus       214 d~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         214 DSVGGK--LAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             ECCCCh--hHHHHHHhhcCCcEEEEEec
Confidence            998853  34566677775567887764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.88  E-value=0.31  Score=40.34  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=50.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++....               ..+       .-.+++.++++  +.|+|+.+...
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~---------------~~~-------~~~~~l~ell~--~aDiVil~lP~  208 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNKDL---------------DFL-------TYKDSVKEAIK--DADIISLHVPA  208 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhHhh---------------hhh-------hccCCHHHHHh--cCCEEEEeCCC
Confidence            5799999999999999999999998764310               000       01124667787  89998877765


Q ss_pred             CccchH-----HHHHhCCCCCcEEEEecc
Q 024575           83 EADEVE-----PILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~~~~-----~l~~~~~~~~~~v~~Ss~  106 (265)
                      +.. +.     .++..++....||.+|-.
T Consensus       209 t~~-t~~li~~~~l~~mk~gavlIN~aRG  236 (330)
T PRK12480        209 NKE-SYHLFDKAMFDHVKKGAILVNAARG  236 (330)
T ss_pred             cHH-HHHHHhHHHHhcCCCCcEEEEcCCc
Confidence            432 22     333445544455555543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=92.82  E-value=0.79  Score=33.30  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=46.4

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecC--CC-----hHHHHHHhhccCcc
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR--KD-----YDFVKSSLSAKGFD   74 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~-----~~~~~~~~~~~~~d   74 (265)
                      ||-|-+|+++++.+..++|-|.-++-.+.+..               ..-.++..|-  ++     .+.+.+.+...++|
T Consensus        10 GGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen   10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             cCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            88899999999999999998888777665521               1112233322  11     13345566667899


Q ss_pred             EEEEcCCCCc
Q 024575           75 VVYDINGREA   84 (265)
Q Consensus        75 ~vi~~a~~~~   84 (265)
                      .||+.||-+.
T Consensus        75 av~CVAGGWA   84 (236)
T KOG4022|consen   75 AVFCVAGGWA   84 (236)
T ss_pred             eEEEeecccc
Confidence            9999988653

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=92.77  E-value=0.31  Score=40.71  Aligned_cols=60  Identities=17%  Similarity=0.096  Sum_probs=45.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |+|.+|..+++.+.+.|++|++++.++......+.             -+.+.+|+.|.+.+.++++  .+|+|.
T Consensus         6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a-------------d~~~~~~~~d~~~i~~~a~--~~dvit   65 (352)
T TIGR01161         6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQVA-------------DHVVLAPFFDPAAIRELAE--SCDVIT   65 (352)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC-------------ceeEeCCCCCHHHHHHHHh--hCCEEE
Confidence            34899999999999999999999887655322221             1234678889999998888  788764

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=92.72  E-value=1  Score=37.93  Aligned_cols=103  Identities=16%  Similarity=0.158  Sum_probs=62.6

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccce--EEEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKIL--HLKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|...|. ++++++.+.-+....-..              ....++.++.+.++  .+...+ +.+.+.
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  126 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV  126 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence            569999999999999994 888888775332111110              01123334445444  343444 355677


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      ++++  ++|+||.+...  ..++.++ ++|. ....+|+.+..+.+|
T Consensus       127 ~~~~--~~DlVid~~Dn--~~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        127 ELLN--GVDLVLDGSDS--FATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            7888  99999998654  2334444 4455 556788877655444

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.70  E-value=0.44  Score=39.03  Aligned_cols=28  Identities=29%  Similarity=0.482  Sum_probs=25.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (265)
                      |+|.+|++++..|.+.||+|++..|++.
T Consensus        11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619         11 GAGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            6799999999999999999999998754

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=92.67  E-value=0.36  Score=40.97  Aligned_cols=65  Identities=17%  Similarity=0.042  Sum_probs=48.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |+|..|..++..+.+.|++|++++.++......+.             -..+..|..|.+.+.+++++.++|.|+...
T Consensus        19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-------------hheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            35788999999999999999999987654221111             124667888989998888877899998653

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=92.66  E-value=1.2  Score=37.95  Aligned_cols=104  Identities=11%  Similarity=0.045  Sum_probs=62.9

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC------CC--------ChhHHhhhhccceE--EEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP------GE--------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~------~~--------~~~~~~~~~~~~~~--~~~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|...|. ++++++.+.-+....-.      ..        ....+.+..+.+++  +...++ .+...
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~  127 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV  127 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence            568999999999999985 67777665433111100      00        11233444555544  344443 44566


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeeec
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK  111 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~~  111 (265)
                      +++.  ++|+||.+... . .++.++ ++|. ..+.||+.+..+.+|.
T Consensus       128 ~~~~--~~D~Vvd~~d~-~-~~r~~ln~~~~~~~~p~v~~~~~g~~G~  171 (392)
T PRK07878        128 ELFS--QYDLILDGTDN-F-ATRYLVNDAAVLAGKPYVWGSIYRFEGQ  171 (392)
T ss_pred             HHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence            7788  99999998643 2 344434 4455 5578888887766663

>PLN02928 oxidoreductase family protein

Probab=92.64  E-value=0.49  Score=39.44  Aligned_cols=91  Identities=14%  Similarity=0.144  Sum_probs=55.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccC---CCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |.|.||+.+++.|...|.+|++..|........   ++.          ..+.-+........++.+++.  +.|+|+.+
T Consensus       166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~L~ell~--~aDiVvl~  233 (347)
T PLN02928        166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPN----------GDVDDLVDEKGGHEDIYEFAG--EADIVVLC  233 (347)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcccc----------ccccccccccCcccCHHHHHh--hCCEEEEC
Confidence            679999999999999999999998863321100   000          000000001113456888898  99999988


Q ss_pred             CCCCccchH-----HHHHhCCCCCcEEEEecc
Q 024575           80 NGREADEVE-----PILDALPNLEQFIYCSSA  106 (265)
Q Consensus        80 a~~~~~~~~-----~l~~~~~~~~~~v~~Ss~  106 (265)
                      ...+. .+.     ..+..++....||.++-.
T Consensus       234 lPlt~-~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        234 CTLTK-ETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             CCCCh-HhhcccCHHHHhcCCCCeEEEECCCc
Confidence            77653 233     344556655566666643

>TIGR00936 ahcY adenosylhomocysteinase

Probab=92.58  E-value=0.38  Score=40.85  Aligned_cols=82  Identities=7%  Similarity=-0.008  Sum_probs=52.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|++..+++.......           ..++.+.  +      +.++++  +.|+||.+.|.
T Consensus       202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-----------~~G~~v~--~------leeal~--~aDVVItaTG~  260 (406)
T TIGR00936       202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-----------MDGFRVM--T------MEEAAK--IGDIFITATGN  260 (406)
T ss_pred             CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-----------hcCCEeC--C------HHHHHh--cCCEEEECCCC
Confidence            5799999999999999999999988876521111           1233322  1      224556  88999988764


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ...-....+..+++...++.++.
T Consensus       261 ~~vI~~~~~~~mK~GailiN~G~  283 (406)
T TIGR00936       261 KDVIRGEHFENMKDGAIVANIGH  283 (406)
T ss_pred             HHHHHHHHHhcCCCCcEEEEECC
Confidence            22222235555665567777664

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=92.57  E-value=1.2  Score=36.43  Aligned_cols=106  Identities=17%  Similarity=0.213  Sum_probs=64.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhcc--ceEEEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~~D~~~~~~~~   65 (265)
                      |.|.+|..+++.|+..|. ++++++.+.-+....-..              .....+.++.+.  ++.+..++.+.+...
T Consensus         6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~~   85 (312)
T cd01489           6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNV   85 (312)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccchH
Confidence            569999999999999984 777777665442111100              011222333344  444555666544345


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeeec
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~  111 (265)
                      +.++  ++|+|+.+.- +...-..+-+.|. ....||...+.+.+|.
T Consensus        86 ~f~~--~~DvVv~a~D-n~~ar~~in~~c~~~~ip~I~~gt~G~~G~  129 (312)
T cd01489          86 EFFK--QFDLVFNALD-NLAARRHVNKMCLAADVPLIESGTTGFLGQ  129 (312)
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence            6777  9999999864 3333333444466 5678888887776653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=92.55  E-value=0.12  Score=44.22  Aligned_cols=30  Identities=17%  Similarity=0.241  Sum_probs=27.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |.|++|..++..|++.|++|++.++++.+.
T Consensus        10 GlG~~G~~~A~~La~~G~~V~~~D~~~~~v   39 (415)
T PRK11064         10 GLGYIGLPTAAAFASRQKQVIGVDINQHAV   39 (415)
T ss_pred             CcchhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            679999999999999999999999988763

>PRK10537 voltage-gated potassium channel; Provisional

Probab=92.53  E-value=0.58  Score=39.69  Aligned_cols=67  Identities=15%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|.++|++++++..+...  ...           ..+..++.+|.+|++.++++=- .+++.|+-+...
T Consensus       247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~AgI-~~A~aVI~~t~d  312 (393)
T PRK10537        247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAGA-ARARAILALRDN  312 (393)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcCc-ccCCEEEEcCCC
Confidence            56889999999999999999988865221  111           2578899999999998876543 278888876654


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      .
T Consensus       313 D  313 (393)
T PRK10537        313 D  313 (393)
T ss_pred             h
Confidence            3

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.42  E-value=0.12  Score=42.26  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|++.|++|++.+++++.
T Consensus        11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130         11 GAGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            56999999999999999999999987655

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.41  E-value=0.081  Score=42.96  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=26.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|+++|++|++.+|+++.
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (292)
T PRK07530         11 GAGQMGNGIAHVCALAGYDVLLNDVSADR   39 (292)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            56999999999999999999999998765

>PRK07574 formate dehydrogenase; Provisional

Probab=92.38  E-value=0.39  Score=40.53  Aligned_cols=85  Identities=18%  Similarity=0.083  Sum_probs=54.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|...... ...          ..++.       -..++.++++  .+|+|+.+...
T Consensus       199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-~~~----------~~g~~-------~~~~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEE-VEQ----------ELGLT-------YHVSFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCCchh-hHh----------hcCce-------ecCCHHHHhh--cCCEEEEcCCC
Confidence            5689999999999999999999998753210 000          01111       1234677888  99999988766


Q ss_pred             CccchHH-----HHHhCCCCCcEEEEeccee
Q 024575           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~~~~~-----l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +. .+..     .+..++....||.++...+
T Consensus       259 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~i  288 (385)
T PRK07574        259 HP-ETEHLFDADVLSRMKRGSYLVNTARGKI  288 (385)
T ss_pred             CH-HHHHHhCHHHHhcCCCCcEEEECCCCch
Confidence            43 3333     4455665566776665443

>PRK06487 glycerate dehydrogenase; Provisional

Probab=92.37  E-value=0.51  Score=38.83  Aligned_cols=76  Identities=16%  Similarity=0.053  Sum_probs=50.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|++.+|....                 ...        +..++.+++.  ..|+|+.+...
T Consensus       155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl  207 (317)
T PRK06487        155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL  207 (317)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence            56999999999998889999998775221                 111        1225778888  89999987765


Q ss_pred             CccchH-----HHHHhCCCCCcEEEEecc
Q 024575           83 EADEVE-----PILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~~~~-----~l~~~~~~~~~~v~~Ss~  106 (265)
                      +.. ++     ..++.++....||.++=.
T Consensus       208 t~~-T~~li~~~~~~~mk~ga~lIN~aRG  235 (317)
T PRK06487        208 TEH-TRHLIGARELALMKPGALLINTARG  235 (317)
T ss_pred             ChH-HhcCcCHHHHhcCCCCeEEEECCCc
Confidence            432 33     344455555566666643

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.35  E-value=1  Score=36.95  Aligned_cols=93  Identities=19%  Similarity=0.192  Sum_probs=57.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEecCCC-hHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (265)
                      .|++|.+|..+++.+...|.+|+++++++.... .+.        .  -++ .++..+-.+ .+.+..... .++|.|++
T Consensus       146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~  213 (329)
T cd08250         146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE-FLK--------S--LGCDRPINYKTEDLGEVLKKEYP-KGVDVVYE  213 (329)
T ss_pred             EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH-HHH--------H--cCCceEEeCCCccHHHHHHHhcC-CCCeEEEE
Confidence            378999999999988888999999988765421 111        0  122 122221111 122333222 47999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +.+.  ......++.++...++|.+++..
T Consensus       214 ~~g~--~~~~~~~~~l~~~g~~v~~g~~~  240 (329)
T cd08250         214 SVGG--EMFDTCVDNLALKGRLIVIGFIS  240 (329)
T ss_pred             CCcH--HHHHHHHHHhccCCeEEEEeccc
Confidence            9873  45556667777666888887654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=92.30  E-value=0.87  Score=37.21  Aligned_cols=92  Identities=23%  Similarity=0.153  Sum_probs=59.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +|++|.+|..+++.+...|.+|+++++++.... .+.          .-++.. ..|..+.   +.+.+.....++|.|+
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA-LVR----------ALGADV-AVDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HcCCCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence            478999999999999999999999988765521 111          112221 1233332   3344444434799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++.+..  .....++.+....+++.++..
T Consensus       217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~~  243 (324)
T cd08244         217 DGVGGA--IGRAALALLAPGGRFLTYGWA  243 (324)
T ss_pred             ECCChH--hHHHHHHHhccCcEEEEEecC
Confidence            998753  346677777766688887743

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=92.29  E-value=0.19  Score=40.88  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=25.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|.+.|++|.+.+|++..
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~   37 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA   37 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999887655

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=92.23  E-value=0.63  Score=36.16  Aligned_cols=103  Identities=24%  Similarity=0.305  Sum_probs=63.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCC----C-C-hhHHhhh-hccceEEE---ecCCC--hHHHHHHhhc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG----E-S-DQEFAEF-SSKILHLK---GDRKD--YDFVKSSLSA   70 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~----~-~-~~~~~~~-~~~~~~~~---~D~~~--~~~~~~~~~~   70 (265)
                      |-|.+|..++++|++.||+|++.++++.........    . . ......+ .+++-++-   +|+++  .+.+...++ 
T Consensus         7 GLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~la~~L~-   85 (300)
T COG1023           7 GLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDDLAPLLS-   85 (300)
T ss_pred             ccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHHHHhhcC-
Confidence            458899999999999999999999998653211110    0 0 0011111 23444443   45555  356677776 


Q ss_pred             cCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecce
Q 024575           71 KGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~  107 (265)
                       .=|+||.-...+-....+-.+.++ ..-+|+-+.|.+
T Consensus        86 -~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSG  122 (300)
T COG1023          86 -AGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSG  122 (300)
T ss_pred             -CCCEEEECCccchHHHHHHHHHHHhcCCeEEeccCCC
Confidence             778888876666555555555555 556777666543

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=92.19  E-value=0.65  Score=38.27  Aligned_cols=81  Identities=14%  Similarity=0.057  Sum_probs=51.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|++.++..........                   .....+++.+++.  ..|+|+.....
T Consensus       149 G~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~-------------------~~~~~~~Ld~lL~--~sDiv~lh~Pl  207 (324)
T COG0111         149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD-------------------GVVGVDSLDELLA--EADILTLHLPL  207 (324)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCCchhhhccc-------------------cceecccHHHHHh--hCCEEEEcCCC
Confidence            57999999999999999999999995444211100                   0122355778888  88888877665


Q ss_pred             CccchHHHH-----HhCCCCCcEEEEec
Q 024575           83 EADEVEPIL-----DALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~-----~~~~~~~~~v~~Ss  105 (265)
                      +. .++.++     ..|+....||.++=
T Consensus       208 T~-eT~g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         208 TP-ETRGLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             Cc-chhcccCHHHHhhCCCCeEEEECCC
Confidence            43 244433     33543335665553

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=92.17  E-value=1  Score=37.56  Aligned_cols=91  Identities=15%  Similarity=0.183  Sum_probs=56.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh----HHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~d~v   76 (265)
                      +|++|.+|..+++.+...|.+|+++++++.+.. .+..         .-++..+ .|..+.    +.+.+... .++|+|
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~-~~~~---------~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvD~v  232 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD-LLKN---------KLGFDEA-FNYKEEPDLDAALKRYFP-EGIDIY  232 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHH---------hcCCCEE-EECCCcccHHHHHHHHCC-CCcEEE
Confidence            488999999999888888999998887665521 1100         0222221 233221    22333322 379999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |++.|.  ......++.++...+++.++.
T Consensus       233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G~  259 (348)
T PLN03154        233 FDNVGG--DMLDAALLNMKIHGRIAVCGM  259 (348)
T ss_pred             EECCCH--HHHHHHHHHhccCCEEEEECc
Confidence            999884  355666777775567776653

>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]

Probab=92.15  E-value=0.54  Score=38.57  Aligned_cols=93  Identities=14%  Similarity=0.168  Sum_probs=58.3

Q ss_pred             ccccchHHHHHHHHHc-CCeEEEEEcCC-CccccCCCCCChhHHhhhhccceEEEecCCChHHH---------------H
Q 024575            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---------------K   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~---------------~   65 (265)
                      |+|+.|+-++.+..+- |.+|++++... ....+.+..       ...+..+.+..  .+....               .
T Consensus        24 GAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~-------ag~~~~~~~e~--~~~s~~a~Ai~aGKi~vT~D~~   94 (438)
T COG4091          24 GAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDR-------AGGPKIEAVEA--DDASKMADAIEAGKIAVTDDAE   94 (438)
T ss_pred             cccccchHHHHHHhhcCCceEEEEecccchHHHHHHHH-------hcCCccccccc--chhhHHHHHHhcCcEEEecchh
Confidence            5799999999999875 88998887543 332211110       00122222222  122222               2


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      .++....+|+||...|....+++-.++++...|++|++.
T Consensus        95 ~i~~~~~IdvIIdATG~p~vGA~~~l~Ai~h~KHlVMmN  133 (438)
T COG4091          95 LIIANDLIDVIIDATGVPEVGAKIALEAILHGKHLVMMN  133 (438)
T ss_pred             hhhcCCcceEEEEcCCCcchhhHhHHHHHhcCCeEEEEE
Confidence            334434789999999988888888888888667777665

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=92.11  E-value=2.5  Score=33.07  Aligned_cols=103  Identities=15%  Similarity=0.095  Sum_probs=59.6

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCcccc---CC-------C----CCChhHHhhhhccceEEEec-CCChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ---QL-------P----GESDQEFAEFSSKILHLKGD-RKDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~---~~-------~----~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~   66 (265)
                      |.|.+|+++++.|++.|. ++++++.+.-....   ++       .    +....++.++.+.+++...+ ..+++...+
T Consensus        18 G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~~~~~~~   97 (231)
T cd00755          18 GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLTPDNSED   97 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecCHhHHHH
Confidence            568999999999999984 77777765433111   00       0    01123344445555444332 123455566


Q ss_pred             HhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecce
Q 024575           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~  107 (265)
                      ++. .++|+||.+... ...-..+.+.|. ....+|...+.+
T Consensus        98 l~~-~~~D~VvdaiD~-~~~k~~L~~~c~~~~ip~I~s~g~g  137 (231)
T cd00755          98 LLG-GDPDFVVDAIDS-IRAKVALIAYCRKRKIPVISSMGAG  137 (231)
T ss_pred             Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeCCc
Confidence            664 269999999654 233345666676 556666655433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.07  E-value=0.9  Score=37.01  Aligned_cols=92  Identities=21%  Similarity=0.210  Sum_probs=57.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEecCCC-hHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (265)
                      +|++|.+|..+++.+...|.+|++++++..+.. .+.          ..++ .++..+..+ .+.+.......++|.+++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  219 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRD-ALL----------ALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFD  219 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH----------HcCCCEEEecCCccHHHHHHHHhCCCCceEEEE
Confidence            488999999999999999999999988765421 111          0122 122222111 223444444346999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +.+.  ......++.+....+++.++.
T Consensus       220 ~~~~--~~~~~~~~~l~~~g~~v~~g~  244 (328)
T cd08268         220 PVGG--PQFAKLADALAPGGTLVVYGA  244 (328)
T ss_pred             CCch--HhHHHHHHhhccCCEEEEEEe
Confidence            9875  445566677775567887764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=92.00  E-value=0.41  Score=40.36  Aligned_cols=81  Identities=20%  Similarity=0.187  Sum_probs=52.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.++.....               ....        ...++.++++  ++|+|+.+...
T Consensus       123 G~G~IG~~va~~l~a~G~~V~~~Dp~~~~~---------------~~~~--------~~~~l~ell~--~aDiV~lh~Pl  177 (381)
T PRK00257        123 GAGHVGGRLVRVLRGLGWKVLVCDPPRQEA---------------EGDG--------DFVSLERILE--ECDVISLHTPL  177 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCccccc---------------ccCc--------cccCHHHHHh--hCCEEEEeCcC
Confidence            679999999999999999999987632210               0111        1124667777  88988877665


Q ss_pred             Ccc---chH-----HHHHhCCCCCcEEEEeccee
Q 024575           83 EAD---EVE-----PILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~---~~~-----~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..   .+.     ..+..++....||.+|-..+
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v  211 (381)
T PRK00257        178 TKEGEHPTRHLLDEAFLASLRPGAWLINASRGAV  211 (381)
T ss_pred             CCCccccccccCCHHHHhcCCCCeEEEECCCCcc
Confidence            442   233     34455665566777776554

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=91.88  E-value=0.99  Score=36.65  Aligned_cols=92  Identities=15%  Similarity=0.159  Sum_probs=56.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +|++|.+|..+++.+...|.+|+++++++... +.+.          ..++.. ..|..+.   +.+.+.....++|.++
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~-~~~~----------~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGA-ELVR----------QAGADA-VFNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----------HcCCCE-EEeCCCcCHHHHHHHHcCCCceEEEE
Confidence            47899999999999999999999998876441 1111          012221 1333333   2344444444799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++++..  ......+.+....+++.+++.
T Consensus       219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         219 EVLANV--NLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence            998642  233444555545678877653

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=91.88  E-value=0.21  Score=45.17  Aligned_cols=68  Identities=21%  Similarity=0.298  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |-|.+|+.+++.|.++|+++++++.+++... ...          ..+...+.+|.++++.++++=- .+.+.++-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vvv~~~d  474 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIE-TLR----------KFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDD  474 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHH-HHH----------hcCCeEEEEeCCCHHHHHhcCC-CcCCEEEEEeCC
Confidence            5689999999999999999999999887632 222          2578899999999998875432 278888877654

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=91.87  E-value=0.77  Score=38.65  Aligned_cols=78  Identities=17%  Similarity=0.118  Sum_probs=47.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|.+.++.....                 .      +.....++.+++.  ++|+|+.....
T Consensus       123 G~G~IG~~vA~~l~a~G~~V~~~dp~~~~~-----------------~------~~~~~~~L~ell~--~sDiI~lh~PL  177 (378)
T PRK15438        123 GVGNVGRRLQARLEALGIKTLLCDPPRADR-----------------G------DEGDFRSLDELVQ--EADILTFHTPL  177 (378)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCccccc-----------------c------cccccCCHHHHHh--hCCEEEEeCCC
Confidence            679999999999999999999987532210                 0      0001234667777  78888866554


Q ss_pred             Ccc---chH-----HHHHhCCCCCcEEEEec
Q 024575           83 EAD---EVE-----PILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~---~~~-----~l~~~~~~~~~~v~~Ss  105 (265)
                      +..   .+.     ..++.++...-||.+|=
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~aR  208 (378)
T PRK15438        178 FKDGPYKTLHLADEKLIRSLKPGAILINACR  208 (378)
T ss_pred             CCCcccccccccCHHHHhcCCCCcEEEECCC
Confidence            432   122     33444554445555553

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=91.78  E-value=0.56  Score=38.45  Aligned_cols=72  Identities=21%  Similarity=0.167  Sum_probs=43.7

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|++|.+|++++..|...+.  +++++++++.. ...+.      +........+....  +.+++.+.++  +.|+||-
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a~D------L~~~~~~~~i~~~~--~~~~~~~~~~--daDivvi   73 (312)
T TIGR01772         5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVAAD------LSHIPTAASVKGFS--GEEGLENALK--GADVVVI   73 (312)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEEch------hhcCCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence            58889999999999988864  89999987622 11111      11001112222111  1122345677  9999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      ++|..
T Consensus        74 taG~~   78 (312)
T TIGR01772        74 PAGVP   78 (312)
T ss_pred             eCCCC
Confidence            99974

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=91.77  E-value=0.37  Score=39.29  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.+++.|++.|++|++.+|++.+
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~   35 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEA   35 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=91.69  E-value=0.26  Score=40.76  Aligned_cols=95  Identities=19%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|-+|..++..|.+.|++|++..|+++.. +.+...... . ....+... ...+.-.++..++++  ++|+||-+...
T Consensus        11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~-~~i~~~~~~-~-~~~~g~~~-~~~~~~~~~~~e~~~--~aD~Vi~~v~~   84 (328)
T PRK14618         11 GAGAWGTALAVLAASKGVPVRLWARRPEFA-AALAAEREN-R-EYLPGVAL-PAELYPTADPEEALA--GADFAVVAVPS   84 (328)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHhCcc-c-ccCCCCcC-CCCeEEeCCHHHHHc--CCCEEEEECch
Confidence            569999999999999999999999976541 111100000 0 00001100 000111123344555  88999888654


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .  ....+++.++....+|.+++
T Consensus        85 ~--~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         85 K--ALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             H--HHHHHHHhcCcCCEEEEEee
Confidence            4  45666666663334444443

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=91.67  E-value=0.37  Score=35.11  Aligned_cols=72  Identities=14%  Similarity=0.096  Sum_probs=46.8

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (265)
                      =|.+|+.+++.|...|.+|.+...+|-...+.           .-.+++..        .+.+++.  ..|++|.+.|..
T Consensus        31 YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA-----------~~dGf~v~--------~~~~a~~--~adi~vtaTG~~   89 (162)
T PF00670_consen   31 YGKVGKGIARALRGLGARVTVTEIDPIRALQA-----------AMDGFEVM--------TLEEALR--DADIFVTATGNK   89 (162)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH-----------HHTT-EEE---------HHHHTT--T-SEEEE-SSSS
T ss_pred             CCcccHHHHHHHhhCCCEEEEEECChHHHHHh-----------hhcCcEec--------CHHHHHh--hCCEEEECCCCc
Confidence            48999999999999999999999987653221           12455433        2556777  899999988875


Q ss_pred             ccchHHHHHhCCC
Q 024575           84 ADEVEPILDALPN   96 (265)
Q Consensus        84 ~~~~~~l~~~~~~   96 (265)
                      ..-....++.++.
T Consensus        90 ~vi~~e~~~~mkd  102 (162)
T PF00670_consen   90 DVITGEHFRQMKD  102 (162)
T ss_dssp             SSB-HHHHHHS-T
T ss_pred             cccCHHHHHHhcC
Confidence            5556677777884

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=91.64  E-value=0.8  Score=37.59  Aligned_cols=80  Identities=14%  Similarity=0.123  Sum_probs=51.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.+..-|-+|.+.+|.....               ..++        ...++.++++  ..|+|+.+...
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~---------------~~~~--------~~~~l~ell~--~sDvv~lh~Pl  206 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNK---------------NEEY--------ERVSLEELLK--TSDIISIHAPL  206 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCcccc---------------ccCc--------eeecHHHHhh--cCCEEEEeCCC
Confidence            579999999999988899999988753220               0111        1235778888  89998877665


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEecce
Q 024575           83 EADE----VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~~----~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +...    -...++.++....||.++-..
T Consensus       207 t~~T~~li~~~~~~~Mk~~a~lIN~aRG~  235 (311)
T PRK08410        207 NEKTKNLIAYKELKLLKDGAILINVGRGG  235 (311)
T ss_pred             CchhhcccCHHHHHhCCCCeEEEECCCcc
Confidence            4321    223445566555666666433

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=91.58  E-value=0.072  Score=38.88  Aligned_cols=94  Identities=20%  Similarity=0.285  Sum_probs=52.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|..|.+++..|.++|++|.+.+|++... +.+.+...  .....+++.+ ...+.-..++.++++  +.|+|+-+.. 
T Consensus         6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~-~~i~~~~~--n~~~~~~~~l-~~~i~~t~dl~~a~~--~ad~IiiavP-   78 (157)
T PF01210_consen    6 GAGNWGTALAALLADNGHEVTLWGRDEEQI-EEINETRQ--NPKYLPGIKL-PENIKATTDLEEALE--DADIIIIAVP-   78 (157)
T ss_dssp             SSSHHHHHHHHHHHHCTEEEEEETSCHHHH-HHHHHHTS--ETTTSTTSBE-ETTEEEESSHHHHHT--T-SEEEE-S--
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEeccHHHH-HHHHHhCC--CCCCCCCccc-CcccccccCHHHHhC--cccEEEeccc-
Confidence            569999999999999999999999987431 11100000  0000011111 111212344567777  9999997654 


Q ss_pred             CccchHHHHHhCC----CCCcEEEEe
Q 024575           83 EADEVEPILDALP----NLEQFIYCS  104 (265)
Q Consensus        83 ~~~~~~~l~~~~~----~~~~~v~~S  104 (265)
                       ....+.+++.++    ....+|.++
T Consensus        79 -s~~~~~~~~~l~~~l~~~~~ii~~~  103 (157)
T PF01210_consen   79 -SQAHREVLEQLAPYLKKGQIIISAT  103 (157)
T ss_dssp             -GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred             -HHHHHHHHHHHhhccCCCCEEEEec
Confidence             456677777766    334455444

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=91.56  E-value=0.62  Score=37.53  Aligned_cols=98  Identities=16%  Similarity=0.198  Sum_probs=63.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---cCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d~vi   77 (265)
                      .||+|-+|+-+.+-..-+|.+|+++.-.+++..-...          ..++. .-.|...+ ++.+.+++   .++|+.|
T Consensus       157 SaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~----------~lGfD-~~idyk~~-d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         157 SAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTE----------ELGFD-AGIDYKAE-DFAQALKEACPKGIDVYF  224 (340)
T ss_pred             EecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHH----------hcCCc-eeeecCcc-cHHHHHHHHCCCCeEEEE
Confidence            3789999988887766779999999998887321111          01221 22344443 33333332   3899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecceeeecC
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAGVYLKS  112 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~~~~~~  112 (265)
                      .+.|-  .-...++..+....|++.++-++.|.+.
T Consensus       225 eNVGg--~v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         225 ENVGG--EVLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             EcCCc--hHHHHHHHhhccccceeeeeehhhcCCC
Confidence            98875  3344555666666799999999888543

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=91.31  E-value=0.74  Score=40.38  Aligned_cols=92  Identities=12%  Similarity=0.064  Sum_probs=60.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-------------H---HHHH
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-------------D---FVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~---~~~~   66 (265)
                      |.|-+|...+..+...|.+|++++++++.. +...          .-+.+++..|..+.             +   ...+
T Consensus       172 GaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rl-e~ae----------slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        172 GAGVAGLAAIGAAGSLGAIVRAFDTRPEVA-EQVE----------SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHH----------HcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            569999999999999999999999987762 2211          13555544443221             1   1112


Q ss_pred             Hhhc--cCccEEEEcCCCCc----cc-hHHHHHhCCCCCcEEEEec
Q 024575           67 SLSA--KGFDVVYDINGREA----DE-VEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        67 ~~~~--~~~d~vi~~a~~~~----~~-~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .+.+  .++|+||.+++...    .. +...++.++....++.++.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~  286 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA  286 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence            2221  27999999998733    23 4677888886667888875

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=91.23  E-value=0.37  Score=38.45  Aligned_cols=73  Identities=14%  Similarity=0.117  Sum_probs=44.8

Q ss_pred             CCccccchHHHHHHHHHcC----CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||+|.+|..++..|+..|    .++++++++++.... ..    ..+.......  ....+.-.++..+.++  ++|+|
T Consensus         4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~-~~----~dl~~~~~~~--~~~~i~~~~d~~~~~~--~aDiV   74 (263)
T cd00650           4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG-VA----MDLQDAVEPL--ADIKVSITDDPYEAFK--DADVV   74 (263)
T ss_pred             ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH-HH----HHHHHhhhhc--cCcEEEECCchHHHhC--CCCEE
Confidence            4888999999999999988    799999988755221 11    1111110110  0112221223445666  99999


Q ss_pred             EEcCCC
Q 024575           77 YDINGR   82 (265)
Q Consensus        77 i~~a~~   82 (265)
                      |.+++.
T Consensus        75 v~t~~~   80 (263)
T cd00650          75 IITAGV   80 (263)
T ss_pred             EECCCC
Confidence            998876

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=91.22  E-value=0.83  Score=37.39  Aligned_cols=72  Identities=21%  Similarity=0.149  Sum_probs=43.1

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|++|.+|++++..|...+  .++++++.+  .......     .+........+....  ..+++.+.++  +.|+||-
T Consensus         6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~al-----DL~~~~~~~~i~~~~--~~~~~y~~~~--daDivvi   74 (310)
T cd01337           6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAA-----DLSHINTPAKVTGYL--GPEELKKALK--GADVVVI   74 (310)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeeh-----HhHhCCCcceEEEec--CCCchHHhcC--CCCEEEE
Confidence            5888999999999998887  589999887  2111110     111111112222110  1122445666  9999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      +||..
T Consensus        75 taG~~   79 (310)
T cd01337          75 PAGVP   79 (310)
T ss_pred             eCCCC
Confidence            99974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07411 hypothetical protein; Validated

Probab=91.21  E-value=2.4  Score=36.04  Aligned_cols=103  Identities=16%  Similarity=0.035  Sum_probs=62.0

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceEEE--ecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLK--GDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--~D~~~~~~~~   65 (265)
                      |.|.+|+.+++.|...|. ++++++.+.-.....-..              .....+.++.+.+++..  ..++ .+...
T Consensus        45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~-~~~~~  123 (390)
T PRK07411         45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS-SENAL  123 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC-HHhHH
Confidence            568999999999999984 666666654332111110              01233344445544433  3333 44566


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      +.+.  ++|+||.+....  .++.++ ++|. ..+.+|+.+..+.+|
T Consensus       124 ~~~~--~~D~Vvd~~d~~--~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        124 DILA--PYDVVVDGTDNF--PTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             HHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            7788  999999997542  244444 4455 567888877766655

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=91.19  E-value=0.53  Score=34.76  Aligned_cols=47  Identities=23%  Similarity=0.320  Sum_probs=35.8

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+++.+|..+++.|.++|.+|+++.|+.                                +++.+.+.  +.|+||.+.+
T Consensus        51 G~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat~   96 (168)
T cd01080          51 GRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAVG   96 (168)
T ss_pred             CCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcCC
Confidence            5645678889999999888888877752                                23456777  9999999877


Q ss_pred             C
Q 024575           82 R   82 (265)
Q Consensus        82 ~   82 (265)
                      .
T Consensus        97 ~   97 (168)
T cd01080          97 K   97 (168)
T ss_pred             C
Confidence            6

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=91.11  E-value=1.2  Score=36.17  Aligned_cols=92  Identities=17%  Similarity=0.185  Sum_probs=55.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +|++|.+|..+++.+...|.+|++++++..... .+.        .  .++. ...+..+.   +.+.+.....++|.++
T Consensus       146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLE-ACR--------A--LGAD-VAINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH--------H--cCCC-EEEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            488899999999999999999999888654411 111        0  1121 11222222   2333444334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++++..  .....++.+....+++.++..
T Consensus       214 ~~~g~~--~~~~~~~~~~~~g~~i~~~~~  240 (323)
T cd05276         214 DMVGGD--YLARNLRALAPDGRLVLIGLL  240 (323)
T ss_pred             ECCchH--HHHHHHHhhccCCEEEEEecC
Confidence            998843  244455556644577776643

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=91.10  E-value=0.27  Score=40.09  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=25.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.+++.|++.|++|++.+|++++
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~   35 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEA   35 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            56899999999999999999999988655

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.10  E-value=0.48  Score=38.19  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=22.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR   27 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r   27 (265)
                      +|++|.+|+.++..|.++|..|++..|
T Consensus       165 iG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        165 VGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             ECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            477778999999999988888877766

>PRK05442 malate dehydrogenase; Provisional

Probab=91.00  E-value=0.49  Score=39.06  Aligned_cols=30  Identities=20%  Similarity=0.127  Sum_probs=24.6

Q ss_pred             CCccccchHHHHHHHHHcC--C-----eEEEEEcCCC
Q 024575            1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGKA   30 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~-----~V~~l~r~~~   30 (265)
                      +|++|.+|+.++..|...+  .     +++++++++.
T Consensus        10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442         10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            4888999999999998765  2     7999988654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.86  E-value=1.2  Score=35.11  Aligned_cols=93  Identities=19%  Similarity=0.240  Sum_probs=55.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHH--HhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS--SLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~--~~~~~~~d~vi~   78 (265)
                      +|+++ +|..+++.+...|.+|+++++++... +.+.        .  .+.. ...|..+.+....  .....++|++++
T Consensus       141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~--------~--~g~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~  207 (271)
T cd05188         141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKL-ELAK--------E--LGAD-HVIDYKEEDLEEELRLTGGGGADVVID  207 (271)
T ss_pred             ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHH-HHHH--------H--hCCc-eeccCCcCCHHHHHHHhcCCCCCEEEE
Confidence            47778 99999998888899999998876441 1111        0  1111 1123333222222  223347999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +++.. ......++.++...+++.++...
T Consensus       208 ~~~~~-~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         208 AVGGP-ETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence            98742 34555666777556788777543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=90.81  E-value=0.56  Score=38.37  Aligned_cols=68  Identities=22%  Similarity=0.304  Sum_probs=43.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEE-----ecCCChHHHHHHhhccCccEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-----GDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |+|-=|++|+..|.++||+|+...|+++...+ +..        ...+..+..     .++.-..++.++++  +.|+|+
T Consensus         8 GaGswGTALA~~la~ng~~V~lw~r~~~~~~~-i~~--------~~~N~~yLp~i~lp~~l~at~Dl~~a~~--~ad~iv   76 (329)
T COG0240           8 GAGSWGTALAKVLARNGHEVRLWGRDEEIVAE-INE--------TRENPKYLPGILLPPNLKATTDLAEALD--GADIIV   76 (329)
T ss_pred             cCChHHHHHHHHHHhcCCeeEEEecCHHHHHH-HHh--------cCcCccccCCccCCcccccccCHHHHHh--cCCEEE
Confidence            45888999999999999999999998755221 110        011222222     22333455677777  788887


Q ss_pred             EcCC
Q 024575           78 DING   81 (265)
Q Consensus        78 ~~a~   81 (265)
                      ....
T Consensus        77 ~avP   80 (329)
T COG0240          77 IAVP   80 (329)
T ss_pred             EECC
Confidence            6543

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=90.67  E-value=0.2  Score=40.60  Aligned_cols=29  Identities=17%  Similarity=0.376  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|++.|++|++.+++++.
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (291)
T PRK06035         10 GSGVMGQGIAQVFARTGYDVTIVDVSEEI   38 (291)
T ss_pred             CccHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            56999999999999999999999998765

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.50  E-value=0.81  Score=37.11  Aligned_cols=28  Identities=21%  Similarity=0.400  Sum_probs=24.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG   28 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~   28 (265)
                      +|.+|.+|+.++..|+++|+.|++..|+
T Consensus       165 IG~s~ivG~PmA~~L~~~gatVtv~~~~  192 (301)
T PRK14194        165 IGRSNIVGKPMAALLLQAHCSVTVVHSR  192 (301)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence            3777899999999999999999998664

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=90.47  E-value=0.78  Score=37.01  Aligned_cols=29  Identities=17%  Similarity=0.261  Sum_probs=26.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|++.|++|++++++++.
T Consensus        10 G~G~mG~~ia~~la~~g~~V~~~d~~~~~   38 (282)
T PRK05808         10 GAGTMGNGIAQVCAVAGYDVVMVDISDAA   38 (282)
T ss_pred             ccCHHHHHHHHHHHHCCCceEEEeCCHHH
Confidence            56999999999999999999999988766

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=90.44  E-value=2  Score=35.10  Aligned_cols=91  Identities=15%  Similarity=0.119  Sum_probs=57.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (265)
                      .|++|.+|..+++.+...|.+|+++++++.+. +.+.          .-++. ...+..+   .+.+.+.....++|.|+
T Consensus       145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~-~~~~----------~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vl  212 (323)
T cd05282         145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQV-EELK----------ALGAD-EVIDSSPEDLAQRVKEATGGAGARLAL  212 (323)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecChHHH-HHHH----------hcCCC-EEecccchhHHHHHHHHhcCCCceEEE
Confidence            47889999999999999999999988876552 1111          11221 1112222   23344444434799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++.+..  .....++.++...+++.++.
T Consensus       213 ~~~g~~--~~~~~~~~l~~~g~~v~~g~  238 (323)
T cd05282         213 DAVGGE--SATRLARSLRPGGTLVNYGL  238 (323)
T ss_pred             ECCCCH--HHHHHHHhhCCCCEEEEEcc
Confidence            998742  34566676775567887764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=90.44  E-value=1.5  Score=36.28  Aligned_cols=89  Identities=12%  Similarity=0.078  Sum_probs=54.0

Q ss_pred             cccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccEEEEcC
Q 024575            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vi~~a   80 (265)
                      .|.+|..+++.+...|.+ |+++++++.+. +...          .-++.. ..|..+  .+.+.+.....++|+||++.
T Consensus       172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~----------~~ga~~-~i~~~~~~~~~~~~~~~~~~~d~vid~~  239 (339)
T cd08239         172 AGPVGLGALMLARALGAEDVIGVDPSPERL-ELAK----------ALGADF-VINSGQDDVQEIRELTSGAGADVAIECS  239 (339)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----------HhCCCE-EEcCCcchHHHHHHHhCCCCCCEEEECC
Confidence            489999999988888988 98887765542 1111          122321 223333  23344444434799999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEec
Q 024575           81 GREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +.. ......++.++...+++.++.
T Consensus       240 g~~-~~~~~~~~~l~~~G~~v~~g~  263 (339)
T cd08239         240 GNT-AARRLALEAVRPWGRLVLVGE  263 (339)
T ss_pred             CCH-HHHHHHHHHhhcCCEEEEEcC
Confidence            753 223445666775567777764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=90.43  E-value=0.32  Score=39.55  Aligned_cols=29  Identities=24%  Similarity=0.329  Sum_probs=26.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|++.|++|++.+++++.
T Consensus        11 G~G~mG~~iA~~l~~~G~~V~~~d~~~~~   39 (295)
T PLN02545         11 GAGQMGSGIAQLAAAAGMDVWLLDSDPAA   39 (295)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            56999999999999999999999988765

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=90.41  E-value=1.2  Score=37.62  Aligned_cols=88  Identities=15%  Similarity=0.162  Sum_probs=55.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|..+++.+...|.+|+++++++++..+...          .-++..+ .|..+.+.+.+...  ++|+||++.|.
T Consensus       186 G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~----------~lGa~~~-i~~~~~~~v~~~~~--~~D~vid~~G~  252 (375)
T PLN02178        186 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAID----------RLGADSF-LVTTDSQKMKEAVG--TMDFIIDTVSA  252 (375)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH----------hCCCcEE-EcCcCHHHHHHhhC--CCcEEEECCCc
Confidence            45999999999888889999998876544111111          1233222 23334445555544  79999999874


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 024575           83 EADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      . ......++.++...+++.++
T Consensus       253 ~-~~~~~~~~~l~~~G~iv~vG  273 (375)
T PLN02178        253 E-HALLPLFSLLKVSGKLVALG  273 (375)
T ss_pred             H-HHHHHHHHhhcCCCEEEEEc
Confidence            3 23456667777556788776

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=90.40  E-value=0.39  Score=41.93  Aligned_cols=30  Identities=17%  Similarity=0.447  Sum_probs=27.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |.|-+|+.+++.|+++|++|.+..|++++.
T Consensus        13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~   42 (493)
T PLN02350         13 GLAVMGQNLALNIAEKGFPISVYNRTTSKV   42 (493)
T ss_pred             eeHHHHHHHHHHHHhCCCeEEEECCCHHHH
Confidence            568899999999999999999999987763

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=90.40  E-value=0.47  Score=41.23  Aligned_cols=30  Identities=20%  Similarity=0.380  Sum_probs=27.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |.|-+|.++++.|+++|++|++..|++++.
T Consensus         6 GLG~MG~~mA~nL~~~G~~V~v~drt~~~~   35 (467)
T TIGR00873         6 GLAVMGSNLALNMADHGFTVSVYNRTPEKT   35 (467)
T ss_pred             eeHHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            568999999999999999999999987763

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=90.17  E-value=1.1  Score=37.16  Aligned_cols=91  Identities=22%  Similarity=0.207  Sum_probs=56.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|++|.+|..+++.+...|.+|++++++. + .....        .  -++. ...|..+.+....+....++|.++++.
T Consensus       169 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~~--------~--~g~~-~~~~~~~~~~~~~l~~~~~vd~vi~~~  235 (350)
T cd08248         169 LGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLVK--------S--LGAD-DVIDYNNEDFEEELTERGKFDVILDTV  235 (350)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHHH--------H--hCCc-eEEECCChhHHHHHHhcCCCCEEEECC
Confidence            47899999999998888899998887642 1 11100        0  1221 122333333333333334799999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEecc
Q 024575           81 GREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +..  .....++.++...+++.++..
T Consensus       236 g~~--~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         236 GGD--TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             ChH--HHHHHHHHhccCCEEEEecCC
Confidence            753  556667777766788887643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=90.14  E-value=0.82  Score=37.58  Aligned_cols=92  Identities=17%  Similarity=0.179  Sum_probs=49.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccce-E--EEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-H--LKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      .||+|+.|..|++.|..+. .++...+.+... ...+.+        ..++.. .  ......|.+.+  ...  ++|+|
T Consensus         8 vGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~-g~~~~~--------~~p~l~g~~~l~~~~~~~~~~--~~~--~~Dvv   74 (349)
T COG0002           8 VGASGYTGLELLRLLAGHPDVELILISSRERA-GKPVSD--------VHPNLRGLVDLPFQTIDPEKI--ELD--ECDVV   74 (349)
T ss_pred             EcCCCCcHHHHHHHHhcCCCeEEEEeechhhc-CCchHH--------hCcccccccccccccCChhhh--hcc--cCCEE
Confidence            4999999999999999985 576666554422 111111        011111 1  11111122322  222  79999


Q ss_pred             EEcCCCCccchHHHHHh-CCCCCcEEEEecce
Q 024575           77 YDINGREADEVEPILDA-LPNLEQFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~  107 (265)
                      |.+...  .....++.. +....++|=+|++.
T Consensus        75 FlalPh--g~s~~~v~~l~~~g~~VIDLSadf  104 (349)
T COG0002          75 FLALPH--GVSAELVPELLEAGCKVIDLSADF  104 (349)
T ss_pred             EEecCc--hhHHHHHHHHHhCCCeEEECCccc
Confidence            988653  222333333 33334488888755

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=90.03  E-value=2  Score=37.34  Aligned_cols=69  Identities=12%  Similarity=-0.068  Sum_probs=46.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEe-------cCCChHHHHHHhhccCccE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-------DRKDYDFVKSSLSAKGFDV   75 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~d~   75 (265)
                      +.|.++..+++.+.+.|++|++++..++.......           ..-+.+..       ++.|.+.+.++....++|+
T Consensus         9 g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~-----------~aD~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~   77 (449)
T TIGR00514         9 NRGEIALRILRACKELGIKTVAVHSTADRDALHVL-----------LADEAVCIGPAPSAKSYLNIPNIISAAEITGADA   77 (449)
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEChhhhcccccc-----------cCCEEEEcCCCCchhchhCHHHHHHHHHHhCCCE
Confidence            56899999999999999999999765332111110           01122221       4556677877777779999


Q ss_pred             EEEcCCC
Q 024575           76 VYDINGR   82 (265)
Q Consensus        76 vi~~a~~   82 (265)
                      |+-..+.
T Consensus        78 I~pg~g~   84 (449)
T TIGR00514        78 IHPGYGF   84 (449)
T ss_pred             EEeCCCc
Confidence            9987654

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=90.03  E-value=0.34  Score=38.95  Aligned_cols=30  Identities=27%  Similarity=0.402  Sum_probs=27.2

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +|.|.+|..+++.|.++|+.|.++.++...
T Consensus         9 vG~GliG~s~a~~l~~~g~~v~i~g~d~~~   38 (279)
T COG0287           9 VGLGLMGGSLARALKEAGLVVRIIGRDRSA   38 (279)
T ss_pred             ECCchHHHHHHHHHHHcCCeEEEEeecCcH
Confidence            679999999999999999999888887765

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=89.98  E-value=1.9  Score=34.13  Aligned_cols=79  Identities=19%  Similarity=0.119  Sum_probs=55.1

Q ss_pred             chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC-Ccc
Q 024575            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR-EAD   85 (265)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~-~~~   85 (265)
                      =|+.+++.|.+.|+ |.+.+-.+.. ......        ......++.+-+.+.+.+.+.+++.+++.||+..-. ...
T Consensus        11 E~r~la~~L~~~g~-v~~sv~t~~g-~~~~~~--------~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~   80 (249)
T PF02571_consen   11 EGRKLAERLAEAGY-VIVSVATSYG-GELLKP--------ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAE   80 (249)
T ss_pred             HHHHHHHHHHhcCC-EEEEEEhhhh-Hhhhcc--------ccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHH
Confidence            37899999999998 5544443333 111110        014667888888899999999998999999998654 334


Q ss_pred             chHHHHHhCC
Q 024575           86 EVEPILDALP   95 (265)
Q Consensus        86 ~~~~l~~~~~   95 (265)
                      -..++.++|+
T Consensus        81 is~na~~a~~   90 (249)
T PF02571_consen   81 ISQNAIEACR   90 (249)
T ss_pred             HHHHHHHHHh
Confidence            4667777776

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=89.98  E-value=2.9  Score=33.81  Aligned_cols=103  Identities=18%  Similarity=0.198  Sum_probs=62.9

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhccceEEEecCCChHHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLKGDRKDYDFVKSS   67 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   67 (265)
                      |.|.+|..+++.|...|. ++++.+.+.-...+.-..              ....++.++.+.+.+...+-.   ...+.
T Consensus        26 G~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~---~~~~~  102 (286)
T cd01491          26 GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP---LTTDE  102 (286)
T ss_pred             cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc---CCHHH
Confidence            568899999999999994 677777665442111110              011233444455444333211   11245


Q ss_pred             hhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeeec
Q 024575           68 LSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (265)
Q Consensus        68 ~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~  111 (265)
                      +.  ++|+||.+.. +......+-++|+ ....||...+.+.+|.
T Consensus       103 l~--~fdvVV~~~~-~~~~~~~in~~c~~~~ipfI~a~~~G~~G~  144 (286)
T cd01491         103 LL--KFQVVVLTDA-SLEDQLKINEFCHSPGIKFISADTRGLFGS  144 (286)
T ss_pred             Hh--cCCEEEEecC-CHHHHHHHHHHHHHcCCEEEEEeccccEEE
Confidence            66  8999998864 4444555666677 6678999888887763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=89.93  E-value=0.72  Score=38.52  Aligned_cols=88  Identities=19%  Similarity=0.191  Sum_probs=52.3

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCc--cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      +|.+|...++.+...|.+|++++|+...  ..+...          .-++..+  |..+.+ +.+.....++|+||++.|
T Consensus       181 ~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~----------~~Ga~~v--~~~~~~-~~~~~~~~~~d~vid~~g  247 (355)
T cd08230         181 AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE----------ELGATYV--NSSKTP-VAEVKLVGEFDLIIEATG  247 (355)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH----------HcCCEEe--cCCccc-hhhhhhcCCCCEEEECcC
Confidence            5999999998888889999999985321  111111          1344432  333321 111111237999999998


Q ss_pred             CCccchHHHHHhCCCCCcEEEEec
Q 024575           82 READEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        82 ~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .. ......++.++...+++.++.
T Consensus       248 ~~-~~~~~~~~~l~~~G~~v~~G~  270 (355)
T cd08230         248 VP-PLAFEALPALAPNGVVILFGV  270 (355)
T ss_pred             CH-HHHHHHHHHccCCcEEEEEec
Confidence            43 234556677774457776664

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=89.92  E-value=1.3  Score=36.24  Aligned_cols=30  Identities=23%  Similarity=0.403  Sum_probs=25.2

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +|+ |++|+.++..|+..+  .++++++.....
T Consensus         6 iGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~   37 (313)
T COG0039           6 IGA-GNVGSSLAFLLLLQGLGSELVLIDINEEK   37 (313)
T ss_pred             ECC-ChHHHHHHHHHhcccccceEEEEEccccc
Confidence            578 999999999998774  589999998544

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=89.90  E-value=0.41  Score=41.57  Aligned_cols=29  Identities=17%  Similarity=0.386  Sum_probs=26.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|-+|+++++.|+++||+|++..|++++
T Consensus         8 GLG~MG~~lA~nL~~~G~~V~v~dr~~~~   36 (470)
T PTZ00142          8 GLAVMGQNLALNIASRGFKISVYNRTYEK   36 (470)
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            56899999999999999999999998876

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=89.88  E-value=1  Score=36.94  Aligned_cols=92  Identities=15%  Similarity=0.175  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +|++|.+|..+++.+.+.|.+|+++++++.+.. .+.+         .-++. ...|..+.   +.+.+... .++|+++
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~-~~~~---------~~g~~-~~~~~~~~~~~~~v~~~~~-~~~d~vi  219 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR-WLVE---------ELGFD-AAINYKTPDLAEALKEAAP-DGIDVYF  219 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHh---------hcCCc-eEEecCChhHHHHHHHhcc-CCceEEE
Confidence            478999999999999999999999988765421 1100         01111 11122222   22333332 4799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ++.+.  ......++.++...+++.+++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         220 DNVGG--EILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             EcchH--HHHHHHHHhcCCCceEEEEeec
Confidence            99874  3455666667755678877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=89.87  E-value=0.52  Score=39.44  Aligned_cols=29  Identities=24%  Similarity=0.461  Sum_probs=27.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      ||||+|...+-.|.+.||+|++++.++.+
T Consensus         7 GtGYVGLv~g~~lA~~GHeVv~vDid~~K   35 (414)
T COG1004           7 GTGYVGLVTGACLAELGHEVVCVDIDESK   35 (414)
T ss_pred             CCchHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            78999999999999999999999999877

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=89.80  E-value=1.3  Score=34.55  Aligned_cols=103  Identities=17%  Similarity=0.176  Sum_probs=63.0

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCcccc----------CCC----CCChhHHhhhhccceEEEe-cCCChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ----------QLP----GESDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~   66 (265)
                      |-|.+|+..++.|.+.|. ++.+++-+.-....          ...    +.+..+...+.+..++... |+..++.+++
T Consensus        37 GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t~en~~~  116 (263)
T COG1179          37 GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFITEENLED  116 (263)
T ss_pred             ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhCHhHHHH
Confidence            468999999999999984 66666654422100          111    1122344444566666554 4557888888


Q ss_pred             HhhccCccEEEEcCCCCccchHHHHHhCCCCCcEEEEeccee
Q 024575           67 SLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      ++.. ++|.||++.-. +..-..|+..|.+-+ +-++||+++
T Consensus       117 ~~~~-~~DyvIDaiD~-v~~Kv~Li~~c~~~k-i~vIss~Ga  155 (263)
T COG1179         117 LLSK-GFDYVIDAIDS-VRAKVALIAYCRRNK-IPVISSMGA  155 (263)
T ss_pred             HhcC-CCCEEEEchhh-hHHHHHHHHHHHHcC-CCEEeeccc
Confidence            8884 89999998532 333345677777222 245566665

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=89.73  E-value=0.37  Score=40.81  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=25.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |.|++|..++..|. .||+|++.++++.+.
T Consensus         7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv   35 (388)
T PRK15057          7 GTGYVGLSNGLLIA-QNHEVVALDILPSRV   35 (388)
T ss_pred             CCCHHHHHHHHHHH-hCCcEEEEECCHHHH
Confidence            67999999997666 599999999998773

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=89.66  E-value=1.1  Score=37.53  Aligned_cols=89  Identities=17%  Similarity=0.138  Sum_probs=55.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|.+|..+++.+...|.+|+++++++.+......          .-++..+ .+..+.+.+.+...  ++|++|++.|.
T Consensus       188 G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~----------~~Ga~~~-i~~~~~~~~~~~~~--~~D~vid~~g~  254 (357)
T PLN02514        188 GLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALE----------HLGADDY-LVSSDAAEMQEAAD--SLDYIIDTVPV  254 (357)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------hcCCcEE-ecCCChHHHHHhcC--CCcEEEECCCc
Confidence            35889999998888889999888876554211111          1223211 23333444555444  79999999874


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      . ......++.++...+++.++.
T Consensus       255 ~-~~~~~~~~~l~~~G~iv~~G~  276 (357)
T PLN02514        255 F-HPLEPYLSLLKLDGKLILMGV  276 (357)
T ss_pred             h-HHHHHHHHHhccCCEEEEECC
Confidence            2 344556777775567887764

>PLN02688 pyrroline-5-carboxylate reductase

Probab=89.64  E-value=0.41  Score=38.23  Aligned_cols=29  Identities=21%  Similarity=0.247  Sum_probs=24.1

Q ss_pred             ccccchHHHHHHHHHcCC----eEEEE-EcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGH----QVTLF-TRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~----~V~~l-~r~~~~   31 (265)
                      |.|.+|.++++.|++.|+    +|++. .|++.+
T Consensus         7 G~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~   40 (266)
T PLN02688          7 GAGKMAEAIARGLVASGVVPPSRISTADDSNPAR   40 (266)
T ss_pred             CCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH
Confidence            579999999999999998    88887 665544

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=89.56  E-value=1.9  Score=34.86  Aligned_cols=92  Identities=20%  Similarity=0.230  Sum_probs=56.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccce-EEEecCCC-hHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (265)
                      .|++|.+|..+++.+...|.+|+++++++.+. +.+.          ..++. ++..+-.+ .+.+.......++|.+++
T Consensus       143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~-~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~  211 (320)
T cd05286         143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKA-ELAR----------AAGADHVINYRDEDFVERVREITGGRGVDVVYD  211 (320)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHH----------HCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEE
Confidence            37889999999999888999999988765542 1111          11221 12111111 123444444447999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +.+.  ......++.++...+++.++.
T Consensus       212 ~~~~--~~~~~~~~~l~~~g~~v~~g~  236 (320)
T cd05286         212 GVGK--DTFEGSLDSLRPRGTLVSFGN  236 (320)
T ss_pred             CCCc--HhHHHHHHhhccCcEEEEEec
Confidence            8874  345556666765567887764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	265
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-21
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	4e-21
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-20
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-19
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	8e-18
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-17
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-17
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-17
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-17
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	9e-17
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-15
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-15
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-14
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-13
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-13
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	3e-13
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	6e-13
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-12
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-12
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	7e-12
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	9e-12
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-11
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-11
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	8e-11
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	8e-10
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	8e-10
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-09
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-09
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-09
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-09
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	9e-09
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-08
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	8e-08
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	3e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-05
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	6e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	8e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	7e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 47/258 (18%), Positives = 81/258 (31%), Gaps = 46/258 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT F+G ++   +  +G+   +       K                E+         D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
              D +         D V  +          I +   N        +          +Y 
Sbjct: 52  TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
           S+   Y     LP  E +   P   +   KL  E +       KG+   +LR  ++YG  
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167

Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              N +   FF +   G  + +  + +   +  + KD A++ +  L  EK S   FNI  
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226

Query: 218 EKYVTFDGLARACAKVTG 235
              +T   +A       G
Sbjct: 227 GDALTNYEVANTINNAFG 244

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 89.7 bits (223), Expect = 4e-21
 Identities = 43/260 (16%), Positives = 72/260 (27%), Gaps = 43/260 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G   +R +   GH + L  R         P    Q  A    +      +  D+
Sbjct: 20  GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
             ++ +L  +G D V           R   E              A     + + +Y  S
Sbjct: 69  AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
           A         LP  E    D     K      K   +    E    G+      P  + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            L+  P        +  G           V       +  R  +  L   +   + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242

Query: 217 GEKYVTFDGLARACAKVTGL 236
           G   +    L R  A++ G 
Sbjct: 243 GH-NLEMADLTRRIAELLGQ 261

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 85.9 bits (213), Expect = 2e-20
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 41/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G + F+G  L    +  G +VT   R    I  +                L + K D   
Sbjct: 11  GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57

Query: 61  YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
            D V      KG D V    +      D  +  +     +          +F+    AG 
Sbjct: 58  LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115

Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
              +  L   ++  V     P  +  G+     +++ K ++W    P     P       
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                       + +   G        V+D A A +  L + K  ++ F I 
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 85.3 bits (211), Expect = 1e-19
 Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F    + I+H  G   D+
Sbjct: 11  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV   +   + +    I+ A+      +  + S  G           
Sbjct: 69  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                  KS  + K      +E++G+ +T +      G   +                + 
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
           I G G         +D+    ++ + + +   +   +      ++ + L     K   
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 236

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 83.5 bits (206), Expect = 1e-19
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 29/222 (13%)

Query: 2   GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I     + LL      +TL+ R                      ++  ++G  ++
Sbjct: 12  GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
              ++ ++     +VV+        ++  I+ AL   N+ + I  S AG+  +  +    
Sbjct: 64  PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
            T    P S  +G+    +VL    +N+T LR  ++Y        E              
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 217
              + +        + + +A   +L     +   R    +  
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 83.5 bits (206), Expect = 1e-19
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 40/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +       GH+VT   R    I Q                I  L+ D  D 
Sbjct: 7   GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
                       +VV D  G   DE E  + +L +L          + +    A    + 
Sbjct: 55  T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEW 166
            D     E+  +     +         LE         +WT + P  ++ P       E 
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164

Query: 167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
                     +     G        ++D A A +  +       + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 84.6 bits (210), Expect = 3e-19
 Identities = 54/260 (20%), Positives = 89/260 (34%), Gaps = 46/260 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G    IG  ++ LL++ G +V     F  G+    + L    +  F         ++G  
Sbjct: 28  GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVE----PILDALPNL---------------EQ 99
            D+  V   +     D V  ++   A   +       D L N                 +
Sbjct: 76  ADHALVNQLIGDLQPDAV--VH--TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGR 131

Query: 100 FIYCSSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYG 156
           F+Y  +A  Y +K    P       +P +      K   E  LE  G+++ + R   + G
Sbjct: 132 FVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVG 191

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
           P N +     FF RL  G+   +            VKDLARA V+ +  +      ++ S
Sbjct: 192 PRNVSGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFS 246

Query: 217 GEKYVTFDGLARACAKVTGL 236
               V    L  A  +   L
Sbjct: 247 SGTDVAIKELYDAVVEAMAL 266

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 80.2 bits (199), Expect = 8e-18
 Identities = 47/266 (17%), Positives = 92/266 (34%), Gaps = 54/266 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L  E +++ +    + G     + +        A        +K D 
Sbjct: 8   GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
              D        KG + V+    + + R   E  P      N       LE        +
Sbjct: 53  AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ S++ VY ++ ++P  E     P S +   KL  E+++     +  +     R   +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQV---TQLGHVKDLARAFVQVLGNEKASR 210
            G    +  + ++     +    + I G+G Q        ++ D   A +  L  ++   
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVDAMLFGLRGDERV- 224

Query: 211 QVFNISGEKYVTFDGLARACAKVTGL 236
            +FNI  E  +    +A    +  GL
Sbjct: 225 NIFNIGSEDQIKVKRIAEIVCEELGL 250

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 78.1 bits (193), Expect = 1e-17
 Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 44/229 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P       A        + GD    
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58

Query: 62  DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
             V  ++   G D V  + G   +      + +   N+         ++ + C+SA +  
Sbjct: 59  ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
               +P       D   R         VL   G+ + ++ P      +   P+       
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
                    P   I         DL    ++ L  ++        S + 
Sbjct: 163 YTVTLDGRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 79.4 bits (196), Expect = 1e-17
 Identities = 48/248 (19%), Positives = 83/248 (33%), Gaps = 38/248 (15%)

Query: 3   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
           G   +G+ L+R L  +GH+VT   R   P+   +          ++         +IL  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69

Query: 55  KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
                        ++A +  D  Y ++  E   +   L AL    L+   + SS GVY +
Sbjct: 70  ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115

Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
                  E      K    K  L  E++L     + T LR   IYGP     +      +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 228
            +     P        T   H  D A     ++         +++ ++  + +    L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225

Query: 229 ACAKVTGL 236
             A   G+
Sbjct: 226 WLADRQGI 233

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 52/273 (19%), Positives = 84/273 (30%), Gaps = 51/273 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K   +V     F  G       L         +  S    ++GD 
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           ++ D   ++    G D V            IN       +PI     N+           
Sbjct: 91  RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
               + F Y +S+  Y     LP  E     P S +   K   E   +      G +   
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++++  +A +   
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261

Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
                A  QV+NI+     + + L  A      
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA 294

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 78.8 bits (194), Expect = 3e-17
 Identities = 30/243 (12%), Positives = 75/243 (30%), Gaps = 21/243 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R    ++     +    F +  +K++  +    D+
Sbjct: 11  GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
             +  +L  K  DVV                  +++A     N+++F+            
Sbjct: 68  QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121

Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
                E            K      +E+  + +T +      G      + +   H +  
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
              + I G G          D+    ++ + + +   +   I      ++   + +   +
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238

Query: 233 VTG 235
           ++ 
Sbjct: 239 LSE 241

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 78.4 bits (193), Expect = 4e-17
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 19/240 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           G T  IG  +    +K G+      R    I    P   ++    + S  ++ L+GD  D
Sbjct: 9   GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
           ++ +  ++  K  D+V    GR   E +  I+ A+      +  + S  G+         
Sbjct: 67  HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117

Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
              D V+P  +  + K +   V+E++GV +T L      G   +                
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
           + I G G          D+    ++   +     +  +I   K Y+T + +     K  G
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 77.2 bits (191), Expect = 9e-17
 Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 50/266 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   LV+ G++V +    + G+    + +        AE          D 
Sbjct: 7   GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           KDY +          DVV+    +   R +   EPI+    N       LE         
Sbjct: 53  KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ SS+ VY  +D++P  E +   P S +   K   E +        GV   ++R   +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167

Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 210
            GP   + V   F  +L+     + + G G Q     +V+D   A +          A  
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 211 QVFNISGEKYVTFDGLARACAKVTGL 236
              N+     V    +A+  A+V GL
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGL 253

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 74.0 bits (181), Expect = 2e-15
 Identities = 50/277 (18%), Positives = 87/277 (31%), Gaps = 54/277 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           G T  IG  L+ +L          +V    R   P   +               I +++ 
Sbjct: 8   GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55

Query: 57  DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
           D  D D  ++ LS        F V +     E +  E        +LDA+    PNL+  
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
              +    Y         ++S   P+ E             L     E V + +G+ W+ 
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 199
            RP  I+G   Y+ +       + A      G+ +   G            D   +A   
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
           +    +  A  + FN+S      +    +  A+  G+
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV 272

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 71.8 bits (176), Expect = 4e-15
 Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 34/222 (15%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I   + ++L  K+  + TLF R  A I +  P           +    + GD  +
Sbjct: 30  GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
           +  +K ++  +G D+VY     E  +++   ++ A+   ++++ I+  S G+Y +     
Sbjct: 79  HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
               + V      K        +E+ G+ +T LRP +    L    + ++        R 
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 217
            P  G+ +        K +A     ++   EK   +   I+ 
Sbjct: 188 EPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 68.8 bits (168), Expect = 9e-14
 Identities = 39/238 (16%), Positives = 88/238 (36%), Gaps = 18/238 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG F+ R  +   H   ++ R   P +     +  +EF      I  ++G+ +++
Sbjct: 11  GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
           + + S L  K  D+V   +          I++A+    N+++F+         +   LP 
Sbjct: 69  EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125

Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
                   +S  + K      +E+  + +T +             +             I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177

Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVT 234
            I G+G     L + +D+A+  ++V  + +   ++      K  ++ + L       +
Sbjct: 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS 235

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 52/268 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +  IG  L   L ++  +  +       IA  +         +F      +  D  + 
Sbjct: 6   GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51

Query: 62  DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
           D +  ++     D ++                   +N    +    IL+A     +E+ +
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
             S+ GV+          + T+  P++     K+  E + +      G++  SLR   I 
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168

Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 209
                            F+            +  +   + ++ D  +A V +   ++   
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228

Query: 210 --RQVFNISGEKYVTFDGLARACAKVTG 235
             R  +N++     T   L     +   
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIP 255

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 53/232 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +  +L   L  +GH+     R +     +L      +          +  + ++ 
Sbjct: 28  GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76

Query: 62  DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
                  S      D V    G        +            +       +++FI  SS
Sbjct: 77  -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131

Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
            G     D  P      ++ +     K   +  L+   +++T +RP              
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPG------------- 171

Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              +    G+ + +     ++T+     D+A+   +++  +    + F +  
Sbjct: 172 PLSNEESTGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 67.6 bits (165), Expect = 3e-13
 Identities = 40/243 (16%), Positives = 88/243 (36%), Gaps = 34/243 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT +IG  + +  +K GH   +FTR    K  +  +            S   + +KG+ 
Sbjct: 18  GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67

Query: 59  KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
            +++ +   +  K  DVV   +   +  +   IL+A+    N+++F+         + + 
Sbjct: 68  DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           LP         ++  + K      +E   + +T +                +        
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAK 232
             I + G+G     + + +D+    ++V  + +A  +  ++  S    +T   L     K
Sbjct: 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELISRWEK 232

Query: 233 VTG 235
             G
Sbjct: 233 KIG 235

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 48/279 (17%), Positives = 88/279 (31%), Gaps = 51/279 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K    V     F+ G       L         E  S+   ++GD 
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           +D    +  +  KG D V            I        +PI     N+           
Sbjct: 89  RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
               + F Y +S+  Y     LP  E +  +P S     ++  ++  +    + G     
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++ ++ +  +   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259

Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRS 241
              + A   ++N++     T + L+        L+    
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHID 298

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 65.4 bits (160), Expect = 6e-13
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L + L    +Q+    R K     Q                  +K    D 
Sbjct: 7   GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50

Query: 62  DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
           D+    ++    G D + +++G     +  + L     L         ++FI  S+    
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFF 168
           L+ +       D +     +  K   +  L +   +++T ++P  +              
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE------------ 155

Query: 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
                     +     +V+    + D+A    +++  + +  +V ++ +G+
Sbjct: 156 -----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 40/250 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +             +G   +
Sbjct: 12  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62

Query: 61  YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
                  +    +G  + +     +  DE+     + DA      ++ +IY S       
Sbjct: 63  ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112

Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              +P        P       K   E+ +   G+  T +            P   +    
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMEL 169

Query: 171 LKAGR---PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDG 225
           +  G      P       +  L    D+  A +Q+  +  +K +     ++ E  ++   
Sbjct: 170 MPDGTFEWHAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQ 227

Query: 226 LARACAKVTG 235
           +  A ++   
Sbjct: 228 VCAAFSRALN 237

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 63.5 bits (154), Expect = 2e-12
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 42/233 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +     + GH+V    R     A    G +                 ++  
Sbjct: 7   GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53

Query: 62  DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
              ++ L     D V D               D    ++  L   +        SA + +
Sbjct: 54  VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111

Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
                P          S+             + +  +  VNW  + P   +         
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
               +       +        +       ++A A +  L +  A R    +  
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 50/287 (17%), Positives = 87/287 (30%), Gaps = 73/287 (25%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           GG  F+G  L + L++ G +QV     L +  K  +        D     F       + 
Sbjct: 39  GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85

Query: 57  DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
              D   + S      +D V+      A          +P+ D   N        E+   
Sbjct: 86  SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139

Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
                  +Y ++     +        T+  D  S H         K+  E       +  
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 188
            +     R   +YGP        W              F ++   G P+P+   G+    
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
              V+D+A   +     +     V+NI+  K  +   LA    ++TG
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITG 305

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 63.3 bits (155), Expect = 7e-12
 Identities = 61/273 (22%), Positives = 99/273 (36%), Gaps = 58/273 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L+  G +V +      GK    + +P         F       + D 
Sbjct: 7   GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           +D + V+ +        V       + + + E +P+LD   N       LE        +
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
            ++ S+ G +Y    +     ET    PKS +   K   E  L       G+ W SLR  
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171

Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 202
            +YGP   +P  E      F  R+  G P+ +     PG    V    +V D+A A    
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           L    +   ++N+   +  T   +  A A+  G
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAG 260

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 62.6 bits (152), Expect = 8e-12
 Identities = 35/270 (12%), Positives = 68/270 (25%), Gaps = 65/270 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  + + L +           R  A   +++ GE+D              GD  
Sbjct: 11  GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
           D D +  +   +G D +  +                                        
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 96  -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
                   ++  +   S G       L       +        K   E  L   G  +T 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
           +R   +                L  G+   +  +  +        D+A   +Q L  E+A
Sbjct: 172 IRAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEA 221

Query: 209 SRQVFNISGEKYVT---FDGLARACAKVTG 235
             + F++  +   T           ++VT 
Sbjct: 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 63.0 bits (154), Expect = 9e-12
 Identities = 48/257 (18%), Positives = 82/257 (31%), Gaps = 43/257 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG   +G  L    + +GH++ +   F  GK    + LP  +     E         G  
Sbjct: 27  GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
            D   ++ +  +     V        D  +   DA  N        +        + +  
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
            +A  Y +   +P        P + +   K   E+ L    V   SLR   + GP   + 
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
             P    F+ RLKAG+          V     + D        L   + +  VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247

Query: 219 KYVTFDGLARACAKVTG 235
            +   + +        G
Sbjct: 248 GHSIKE-VFDVVLDYVG 263

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 35/242 (14%), Positives = 77/242 (31%), Gaps = 26/242 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG F++   +       +  R           +  +   +  + I  + G   + 
Sbjct: 17  GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
           + ++  L     D+V    G E+   +  ++ A           + G    +L S+    
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121

Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
            + +  DP       ++ K     ++E  G+ +T +    I     YN +       L  
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
                I G G          D+ +  ++ + + +   +  +       +  + LA    K
Sbjct: 180 TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEK 239

Query: 233 VT 234
             
Sbjct: 240 KI 241

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 54/328 (16%), Positives = 92/328 (28%), Gaps = 89/328 (27%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
           GG  + G   +  L K+ ++V +     R        L    P  S  +       +   
Sbjct: 18  GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77

Query: 54  ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
                 GD  D++F+  S  +   D V          Y +  R       +     N   
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 97  ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
               L            +   + G Y      P+ + +       H G+ +T        
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189

Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
                SK              G+  T L    +YG               L+Y+ V    
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 167 ---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYV 221
              F  +   G P+ + G G Q      ++D  +     + N   + +  VFN   E++ 
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309

Query: 222 TFDGLARACAKVTGLLDFRSLNLCTTTP 249
             + LA    K    L      +    P
Sbjct: 310 VNE-LASLVTKAGSKLGLDVKKMTVPNP 336

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 59.9 bits (145), Expect = 8e-11
 Identities = 46/237 (19%), Positives = 78/237 (32%), Gaps = 29/237 (12%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           +    LSR L  +G ++   +R           +  +      ++ L   G+    D V 
Sbjct: 15  YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65

Query: 66  SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             L +     G D V    G +      I           Y S+  VY   D     ET 
Sbjct: 66  HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119

Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
            + P + R + ++   +       +     R   IYGP    P       +L  G    I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
                QV    HV+D+A+     +        V+N+  ++ V    +    A++ GL
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVCDDEPVPPQDVIAYAAELQGL 228

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 57.3 bits (139), Expect = 8e-10
 Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 54/253 (21%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G    IG  L++ L K  G +  +     +    +    P                   +
Sbjct: 9   GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53

Query: 58  RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
             D++ ++  +       +Y    +    A E  P      N+               ++
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
             + SS  V+  +    +    T+  P + + G  K   E   E      GV+  S+R  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171

Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---G 204
            +                  F++  A +      S      + ++ D   A + ++    
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231

Query: 205 NEKASRQVFNISG 217
            +      +N++ 
Sbjct: 232 EKIKIHSSYNLAA 244

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 32/187 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV----YLKSDL 114
           DY+  +S   A  G   +  I+G   D    I+     ++       AGV    Y     
Sbjct: 53  DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKA---ARDAGVKHIAYT-G-- 106

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
               E   +     H     TE  + +  + +T LR         Y    V E      +
Sbjct: 107 YAFAEESIIPLAHVHLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTE 157

Query: 173 AGRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
           +G  +   GSG    +         +LA A   VL  E    + +N+   +  TFD LA+
Sbjct: 158 SGAIVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ 211

Query: 229 ACAKVTG 235
             ++V+G
Sbjct: 212 ILSEVSG 218

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 35/231 (15%), Positives = 74/231 (32%), Gaps = 37/231 (16%)

Query: 11  LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
            ++ +        +  R    +     G+      +             DY   +S + A
Sbjct: 17  TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62

Query: 71  -KGFDVVYDINGREADEVEPILDALPNLEQFIY-CSSAGV----YLKSDLLPHCETDTVD 124
            KG D V  I              +P +E  +Y    +GV    ++        + +   
Sbjct: 63  FKGMDTVVFIPSIIHPSF----KRIPEVENLVYAAKQSGVAHIIFI-G--YYADQHNNPF 115

Query: 125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 184
             S + G      +L + G+++T +R         Y    + +   L     +  P    
Sbjct: 116 HMSPYFGY--ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDG 167

Query: 185 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           ++       D+AR  + ++ N     + + +SG  Y     LA   ++ +G
Sbjct: 168 RIN-YITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASG 216

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 71/273 (26%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  L+R LV  G +VT    L      P                      L+  
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58

Query: 58  RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
               +  +  L      +VY                    +++                 
Sbjct: 59  V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109

Query: 90  ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-----KG 143
                  + + +  S+  VY ++D LP  E   + P+S +   K+  E V  +       
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163

Query: 144 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
                +R   +YGP    + +       L     +P+ G G Q     ++ D+    V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
               +    V N    + ++ + + R     + 
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSP 254

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 45/273 (16%), Positives = 93/273 (34%), Gaps = 55/273 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
           GG  F+G  L+    +     +V +   F         +       +    F  +++   
Sbjct: 17  GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74

Query: 56  GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
            D  +   ++  L    FD ++      +    +     L    N +             
Sbjct: 75  ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130

Query: 99  -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
            + IY SSAGVY  +   P+       P++ + G  KL  +  +   S       LR  Y
Sbjct: 131 AKVIYASSAGVYGNTK-APNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186

Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
             +YGP          +         A + + +   G Q    V    +++D+ +A V+ 
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKA 242

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           +  +K+   V+N+   +  +++ +     +  G
Sbjct: 243 MKAQKS--GVYNVGYSQARSYNEIVSILKEHLG 273

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 43/270 (15%), Positives = 73/270 (27%), Gaps = 56/270 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 56  FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQV---TQLGHVKDLARAFVQVLGN 205
           YGP      +   V      +L  G  P    GS           +V D+A   +  L  
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFL-- 225

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTG 235
           E     +FN+   +  +F  +A A      
Sbjct: 226 ENGVSGIFNLGTGRAESFQAVADATLAYHK 255

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 49/256 (19%), Positives = 87/256 (33%), Gaps = 55/256 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
           GGT   G  ++R L+++G  +V + TR  +   A++L   G      AE       ++GD
Sbjct: 12  GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59

Query: 58  RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
           + D   ++ +L   G    + +     +  +  EV+    + D      L   +Y     
Sbjct: 60  QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117

Query: 108 VYLKSD---LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
           +   +       H +           GK   E      GV  TS+R    +     N + 
Sbjct: 118 IKKLTAGRLAAAHFD-----------GKGEVEEYFRDIGVPMTSVRLPCYF----ENLLS 162

Query: 165 EWFFHRLKAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEK 219
            +   +   G+     +P     +       V DL    + +L   EK   Q   +S   
Sbjct: 163 HFLPQKAPDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC- 218

Query: 220 YVTFDGLARACAKVTG 235
             T +  A    K T 
Sbjct: 219 RHTAEEYAALLTKHTR 234

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 46/272 (16%), Positives = 85/272 (31%), Gaps = 54/272 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G   FI   ++R L  EGH V     +    + + +      EF            D + 
Sbjct: 36  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            +        +G D V+    D+ G    +    +    N                ++F 
Sbjct: 84  MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141

Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
           Y SSA +Y +   L               +P+      KL TE +     +  G+     
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201

Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           R   IYGP   +    E     F  +   +     + G G+Q      + +     +++ 
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
             +   R+  NI  ++ V+ + +A        
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEE 291

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 54.3 bits (131), Expect = 9e-09
 Identities = 39/282 (13%), Positives = 70/282 (24%), Gaps = 67/282 (23%)

Query: 2   GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
           G    +G  L++ LVK+G        + TL    +        G       +        
Sbjct: 21  GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
             D       +  L     DV++    I   EA E++       NL+             
Sbjct: 70  AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127

Query: 99  -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
                  + ++ SS  V+      P  +     P +     K     E +L         
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK--AICELLLSDYSRRGFF 185

Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
           +   +R   I             +             G+   +P            +   
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAV 242

Query: 197 RAFVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
              +        +   R+  ++ G    T      A  KV G
Sbjct: 243 GFLIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAG 283

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 44/271 (16%), Positives = 74/271 (27%), Gaps = 58/271 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 53  GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 102

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 103 FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 157

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 158 FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV 217

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQVLG 204
           YGP      +   V      +L  G  P    GS       V    +V D+A   +  L 
Sbjct: 218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWFL- 272

Query: 205 NEKASRQVFNISGEKYVTFDGLARACAKVTG 235
            E     +FN+   +  +F  +A A      
Sbjct: 273 -ENGVSGIFNLGTGRAESFQAVADATLAYHK 302

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 33/186 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDIN----GREADEVEPILDALPNLEQFIYCSSAGV----YL 110
           DY    +  SA +G + +  I+    G+ A +   +++A           +AGV    Y 
Sbjct: 52  DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINA---------AKAAGVKFIAYT 102

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            S  L H +T  +     H     TE +L   G+ +T LR  +      Y+         
Sbjct: 103 -S--LLHADTSPLGLADEHIE---TEKMLADSGIVYTLLRNGW------YSENYLASAPA 150

Query: 171 LKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                      G G          D A A  +V+       +V+ ++G+   T   LA  
Sbjct: 151 ALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAE 208

Query: 230 CAKVTG 235
             K +G
Sbjct: 209 LTKQSG 214

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 32/218 (14%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F  K+       +
Sbjct: 25  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83

Query: 60  DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
            +D         +    A+GF  V  D   + A+  +         + F   SS G    
Sbjct: 84  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 171
           S+ L            + KG++    V E K   ++  RP  +      +   EW   + 
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
                +P   +         V  + RA +  +   +  
Sbjct: 188 --FGSLPDSWASGHSV---PVVTVVRAMLNNVVRPRDK 220

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 50.4 bits (121), Expect = 8e-08
 Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 56/230 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G T   G  L   ++ E    +V    R       +L                       
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64

Query: 60  DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
             D          K + S + F  V +D+                    ++  S+ G   
Sbjct: 65  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGA-- 117

Query: 111 KSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
                        D KS     R KG+L  +++ E      T  RP  ++GP       E
Sbjct: 118 -------------DAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLFGP------RE 157

Query: 166 WFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            F        PI   +PG    +       DLARA  ++   E    +  
Sbjct: 158 EFRLAEILAAPIARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 42/249 (16%), Positives = 69/249 (27%), Gaps = 53/249 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
           G   F+G  L   L     H +    R             ++E      K   I+HL G 
Sbjct: 7   GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
                        +        N      ++ +LD L     +  I  SS+         
Sbjct: 57  N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA------ 97

Query: 116 PHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LNYNPVEEWF 167
                      + + + KL  E +L    E  G      R   ++G     NYN V   F
Sbjct: 98  --------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATF 149

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGL 226
            +++     I +         L +V D+     + + G       V  +     VT   +
Sbjct: 150 CYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208

Query: 227 ARACAKVTG 235
                K   
Sbjct: 209 VDLLYKFKQ 217

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L    H+V L           +   + +   E       +  D  D 
Sbjct: 9   GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
             V   +  K  D +  +       VE P  D L           E        + ++ S
Sbjct: 55  QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
           S                    P S +   K   E +         +   ++R    +   
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169

Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
            +   +  W           R    P  G  V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 154 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204
           +YG   +   ++    WF  +         +P  I G+G QV  + H +D+   +   L 
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254

Query: 205 NEKASR-QVFNISG 217
           N    R   FNI G
Sbjct: 255 NVSKIRGNAFNIGG 268

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 29/239 (12%), Positives = 54/239 (22%), Gaps = 62/239 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L      + L            P +      E       ++ D  D 
Sbjct: 10  GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
           + V + +   G D +       +       ++        + +A       + ++ SS  
Sbjct: 56  NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113

Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
                             P   + G  K   E++     +  G     +R       P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           Y  +  WF H                        D       V         V   +  
Sbjct: 173 YRMLSTWFSHD-----------------------DFVSLIEAVFRAPVLGCPVVWGASA 208

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGESDQEFAEFSSKILHLKG 56
           G    +G  L+  L   GH+V    R +    ++   P     +  + +  ++HL G
Sbjct: 154 GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	265
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.98
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.98
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.98
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.98
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.96
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.95
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.85
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.85
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.84
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.84
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.82
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.81
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.81
1spx_A	278	Short-chain reductase family member (5L265); paral	99.81
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.8
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.8
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.8
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.79
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.79
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.79
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.79
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.79
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.79
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.78
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.78
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.78
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.78
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.77
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.77
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.77
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.77
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.77
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.77
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.77
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.77
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.77
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.76
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.76
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.76
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.76
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.76
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.76
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.76
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.76
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.76
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.76
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.76
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.75
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.75
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.75
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.75
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.75
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.75
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.75
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.75
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.75
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.75
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.75
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.75
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.75
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.74
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.74
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.74
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.74
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.74
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.74
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.74
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.74
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.74
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.74
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.74
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.74
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.74
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.74
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.74
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.74
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.73
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.73
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.73
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.73
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.73
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.73
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.73
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.73
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.73
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.73
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.73
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.73
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.73
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.73
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.73
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.73
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.73
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.73
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.73
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.73
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.72
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.72
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.72
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.72
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.72
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.72
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.72
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.72
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.72
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.72
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.72
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.71
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.71
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.71
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.71
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.71
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.71
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.71
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.71
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.71
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.71
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.71
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.71
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.71
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.71
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.71
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.71
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.7
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.7
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.7
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.7
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.7
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.7
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.7
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.7
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.69
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.69
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.69
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.69
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.69
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.69
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.69
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.69
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.68
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.68
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.68
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.68
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.68
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.68
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.68
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.68
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.67
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.67
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.67
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.67
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.67
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.67
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.66
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.66
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.66
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.66
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.66
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.66
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.65
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.65
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.65
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.65
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.65
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.65
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.65
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.65
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.64
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.64
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.64
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.64
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.64
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.64
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.63
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.63
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.63
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.62
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.62
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.61
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.61
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.61
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.6
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.6
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.6
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.6
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.59
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.59
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.59
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.58
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.58
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.58
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.57
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.57
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.56
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.56
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.56
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.55
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.55
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.53
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.52
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.51
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.47
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.46
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.42
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.41
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.39
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.34
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.32
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.26
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.24
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.15
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.14
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.14
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.03
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.91
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.86
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.84
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.81
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.8
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.79
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.69
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.42
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.31
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.27
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.12
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.11
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.98
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.87
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.81
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.75
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.74
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.74
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.7
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.7
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.6
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.56
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.55
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.5
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.44
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.38
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.34
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.32
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.28
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.28
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.18
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.13
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.98
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.88
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.82
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.76
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.73
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.72
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.71
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.68
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.65
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.6
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.58
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.53
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.53
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.51
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.43
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.4
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.36
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.29
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.27
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.2
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.17
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.14
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.06
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.96
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.96
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.95
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.92
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.9
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.9
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.87
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.78
1lnq_A	336	MTHK channels, potassium channel related protein;	95.65
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.64
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.61
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.59
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.51
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.49
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.38
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.36
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.3
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	95.28
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.27
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.24
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.21
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.18
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.14
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.02
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.98
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.94
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.92
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	94.91
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	94.9
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.89
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	94.84
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	94.8
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.8
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.77
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	94.75
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	94.74
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.7
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	94.63
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	94.62
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	94.6
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.57
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.55
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.51
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.48
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	94.47
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.47
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	94.46
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	94.45
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.42
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	94.39
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.38
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	94.37
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	94.29
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	94.28
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	94.23
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	94.22
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	94.2
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	94.18
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	94.15
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	94.09
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.08
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	94.08
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.02
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	93.98
2duw_A	145	Putative COA-binding protein; ligand binding prote	93.97
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	93.96
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	93.95
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	93.9
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.86
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	93.85
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	93.85
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	93.84
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	93.76
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	93.76
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	93.73
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	93.69
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	93.66
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	93.62
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	93.62
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	93.61
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	93.6
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	93.59
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.59
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	93.59
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	93.52
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.51
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	93.5
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.49
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	93.29
3qha_A	296	Putative oxidoreductase; seattle structural genomi	93.27
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	93.22
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	93.19
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	93.15
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	93.15
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	93.14
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	93.12
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.06
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	93.06
4ezb_A	317	Uncharacterized conserved protein; structural geno	93.06
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	93.05
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	93.03
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	92.94
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	92.93
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	92.91
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	92.88
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	92.86
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	92.74
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	92.71
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	92.65
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	92.64
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	92.63
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	92.57
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	92.54
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	92.53
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	92.53
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	92.52
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	92.5
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	92.46
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.44
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	92.36
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	92.34
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	92.31
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	92.31
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.17
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	92.17
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	92.16
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	92.15
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	92.1
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	92.1
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	92.09
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	92.01
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	91.95
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	91.86
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	91.84
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	91.83

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.3e-37  Score=251.73  Aligned_cols=227  Identities=22%  Similarity=0.306  Sum_probs=197.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|++|++++|++.. .. +            .+++++.+|++ .+++.++++  ++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence            7999999999999999999999999999333 11 1            38899999999 999999999  999999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh----
Q 024575           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----  141 (265)
Q Consensus        81 ~~~------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~----  141 (265)
                      +..            ..++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|.++++    
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  150 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK  150 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            863            234788999987  7889999999999998887889999998888877 999999998854    


Q ss_pred             cCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCc
Q 024575          142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       142 ~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (265)
                      .+++++++||+++|||+... .++..++..+..+..+.+++++++.+++++++|+|++++.+++++. .+++||+++++.
T Consensus       151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            69999999999999997543 6777888888888888888888999999999999999999999876 578999999999


Q ss_pred             cCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          221 VTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       221 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      +|+.|+++.+++.+|.+.    ++...+.
T Consensus       230 ~s~~e~~~~i~~~~g~~~----~~~~~~~  254 (311)
T 3m2p_A          230 LTNYEVANTINNAFGNKD----NLLVKNP  254 (311)
T ss_dssp             ECHHHHHHHHHHHTTCTT----CEEECSS
T ss_pred             ccHHHHHHHHHHHhCCCC----cceecCC
Confidence            999999999999999987    5555554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=5.6e-37  Score=253.46  Aligned_cols=236  Identities=19%  Similarity=0.208  Sum_probs=197.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|++......+.............+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  108 (351)
T 3ruf_A           31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDHVLHQA  108 (351)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCEEEECC
Confidence            799999999999999999999999999876522111000000000001689999999999999999999  999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..                ..++.+++++++  ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|.+++ 
T Consensus       109 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  188 (351)
T 3ruf_A          109 ALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQV  188 (351)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHH
Confidence            862                345778899987  7889999999999998888899999998888877 99999999875 


Q ss_pred             ---hcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC-ccccCc
Q 024575          141 ---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQ  211 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~~~~~~  211 (265)
                         +.+++++++||+++|||+...     .++..++..+..+..+.+++++++.++++|++|+|++++.++.. +...++
T Consensus       189 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  268 (351)
T 3ruf_A          189 YARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDN  268 (351)
T ss_dssp             HHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCC
Confidence               458999999999999997532     56777888888888888888899999999999999999999987 455688


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +||+++++.+|+.|+++.+.+.+|.+.
T Consensus       269 ~~ni~~~~~~s~~e~~~~i~~~~g~~~  295 (351)
T 3ruf_A          269 IYNVAVGDRTTLNELSGYIYDELNLIH  295 (351)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCcccHHHHHHHHHHHhCccc
Confidence            999999999999999999999999843

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=5e-37  Score=255.72  Aligned_cols=225  Identities=19%  Similarity=0.277  Sum_probs=193.5

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC-ChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++|+++|+++ |++|++++|++........          ..+++++.+|++ |.+.+.++++  ++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih   97 (372)
T 3slg_A           30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP   97 (372)
T ss_dssp             ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence            799999999999999998 9999999998766322211          268999999999 9999999999  9999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCC-------Cccccc-cch
Q 024575           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (265)
                      +|+..                ..++.+++++++  + ++|||+||.++||.....++.|++..       .|.+.| .+|
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            99863                355688999987  6 99999999999998877788887754       455556 999


Q ss_pred             hhHHHHHhhc---CCceeEeecceeeCCCCC---------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       133 ~~~E~~~~~~---~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ..+|.+++..   +++++++||+++|||+..         ..++..++..+..++.+.+++++++.++++|++|+|++++
T Consensus       177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            9999998665   899999999999999753         3467778888888888888888889999999999999999


Q ss_pred             HHhcCcc--ccCceEEecCC-CccCHHHHHHHHHHHhCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~  238 (265)
                      .+++++.  ..+++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~  297 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFP  297 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCT
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCc
Confidence            9998875  46889999994 89999999999999999775

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.2e-36  Score=247.57  Aligned_cols=229  Identities=23%  Similarity=0.274  Sum_probs=191.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|.+.......           ..+++++.+|+.|.+ +.++++  + |+|||+|
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A   70 (312)
T 3ko8_A            6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA   70 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence            799999999999999999999999999876633222           268899999999998 888887  5 9999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..                ..++.+++++++  ++++|||+||..+|+.....+.+|+.+..|.+.| .+|..+|.+++ 
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            852                234678888877  8889999999999998888889999888888877 99999999874 


Q ss_pred             ---hcCCceeEeecceeeCCCCCCchhHHHHHHHHcC-CcccCCCCCCceeeeeeHHHHHHHHHHHhcC---ccccCceE
Q 024575          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF  213 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~  213 (265)
                         +.+++++++||+++|||+....++..++.....+ ..+..++++++.++++|++|+|++++.++++   +...+++|
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence               3589999999999999987667777777777666 4566778888999999999999999999987   44457899


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCccccccceeeC
Q 024575          214 NISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       214 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      |+++++.+|+.|+++.+.+.+|.+.    ++...+
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~  261 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRP----EIRLVP  261 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCC----EEEEC-
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCC----ceeecC
Confidence            9999999999999999999999887    555544

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=5.3e-36  Score=247.18  Aligned_cols=231  Identities=17%  Similarity=0.244  Sum_probs=194.7

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      ||||||||++|+++|+++|  ++|++++|..... ...+...      ....+++++.+|++|.+.+.++++..++|+||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi  103 (346)
T 4egb_A           30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI------QDHPNYYFVKGEIQNGELLEHVIKERDVQVIV  103 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT------TTCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred             ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh------ccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999999  7888888775331 1111110      00258999999999999999999944599999


Q ss_pred             EcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecC-CCCCCCCCCCCCccccc-cchhhHHH
Q 024575           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~-~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+|+..                ..++.+++++++  ++++|||+||.++|+.. ...+++|+.+..|.+.| .+|..+|.
T Consensus       104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  183 (346)
T 4egb_A          104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM  183 (346)
T ss_dssp             ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence            999863                234678999987  78899999999999976 46688999988888877 99999999


Q ss_pred             HHhh----cCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCce
Q 024575          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (265)
Q Consensus       138 ~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (265)
                      +++.    .+++++++||+++|||+.. ..++..++..+..+..+.+++++++.++++|++|+|++++.+++++. .+++
T Consensus       184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  262 (346)
T 4egb_A          184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV  262 (346)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence            8854    6999999999999999853 46677888888888888888889999999999999999999998776 5789


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          213 FNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       213 ~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ||+++++.+++.|+++.+.+.+|.+.
T Consensus       263 ~~i~~~~~~s~~e~~~~i~~~~g~~~  288 (346)
T 4egb_A          263 YNIGGNNEKTNVEVVEQIITLLGKTK  288 (346)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHHTCCG
T ss_pred             EEECCCCceeHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999886

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.2e-36  Score=251.16  Aligned_cols=227  Identities=20%  Similarity=0.268  Sum_probs=196.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||+++++.|+++|++|++++|++..                 .+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence            7999999999999999999999999998765                 567889999999999999999  999999999


Q ss_pred             CCC--------------ccchHHHHHhCC--CCCcEEEEecceeeec--CCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~--------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~--~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..              ..++.+++++++  ++++|||+||.++|+.  ....+++|+.+..|.+.| .+|..+|.+++ 
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            863              235678899877  7889999999999997  567788999888888877 99999999885 


Q ss_pred             ---hcCCceeEeecceee-------------CCCCC------------CchhHHHHHHHHcCCcccCCCCCCceeee---
Q 024575          141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL---  189 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  189 (265)
                         +.+++++++||+++|             ||+..            ..++..++.....+..+.+++++++.+++   
T Consensus       166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  245 (347)
T 4id9_A          166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH  245 (347)
T ss_dssp             HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred             HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence               468999999999999             77532            45666777778788877777888888899   


Q ss_pred             -eeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCC
Q 024575          190 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPK  250 (265)
Q Consensus       190 -i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  250 (265)
                       +|++|+|++++.+++++...+++||+++++.+|+.|+++.+.+.+|.+.    ++...+..
T Consensus       246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~p~~  303 (347)
T 4id9_A          246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI----VTVDFPGD  303 (347)
T ss_dssp             EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE----EEEECSSC
T ss_pred             cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC----ceeeCCCc
Confidence             9999999999999998866688999999999999999999999999987    55555544

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=8.5e-36  Score=242.67  Aligned_cols=222  Identities=21%  Similarity=0.283  Sum_probs=187.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++| .++++.+.........           ..+++++.+|+++ +++.++++  ++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a   71 (313)
T 3ehe_A            7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA   71 (313)
T ss_dssp             ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence            7999999999999999999 5666665544422222           2678999999999 88999998  999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..                ..++.+++++++  ++++|||+||..+||.....+.+|+.+..|.+.| .+|..+|.+++ 
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            852                234677888877  7889999999999998888889998888888877 99999999874 


Q ss_pred             ---hcCCceeEeecceeeCCCCCCchhHHHHHHHHcC-CcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEec
Q 024575          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (265)
                         +.+++++++||+++|||+....++..++.....+ ..+..++++++.++++|++|+|++++.+++.. ..+++||++
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~  230 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFNIG  230 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEEEC
Confidence               4689999999999999987667777777777666 56667788999999999999999999999843 357899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCc
Q 024575          217 GEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       217 ~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++.+|+.|+++.+++.+|.+.
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~~  252 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLSP  252 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCC
T ss_pred             CCCCeeHHHHHHHHHHHhCCCC
Confidence            9999999999999999999876

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=4.8e-35  Score=242.86  Aligned_cols=237  Identities=17%  Similarity=0.188  Sum_probs=192.4

Q ss_pred             CCccccchHHHHHHHHH--cCCeEEEEEcCCCcccc--CCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~--~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~   75 (265)
                      ||||||||++++++|++  .|++|++++|+......  ...+...........++.++.+|++|.+.+.++ ..  ++|+
T Consensus        16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~   93 (362)
T 3sxp_A           16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY   93 (362)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence            79999999999999999  89999999997762100  000000000011135789999999999999998 55  9999


Q ss_pred             EEEcCCCC--------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      |||+|+..              ..++.+++++++  +++ |||+||.++||.... +.+|+.+..|.+.| .+|..+|.+
T Consensus        94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~  171 (362)
T 3sxp_A           94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF  171 (362)
T ss_dssp             EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence            99999853              345778888887  555 999999999998766 88999998888877 999999999


Q ss_pred             HhhcC--CceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          139 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       139 ~~~~~--~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      ++...  ++++++||+++|||+...     .++..++..+..+..+.+++++++.++++|++|+|++++.+++++. .| 
T Consensus       172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g-  249 (362)
T 3sxp_A          172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG-  249 (362)
T ss_dssp             HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE-
T ss_pred             HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC-
Confidence            97654  889999999999998532     5677788888888888888888899999999999999999998875 35 


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCccccccceeeC
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      +||+++++.+|+.|+++.+.+.+| +.    ++...+
T Consensus       250 ~~~i~~~~~~s~~e~~~~i~~~~g-~~----~~~~~~  281 (362)
T 3sxp_A          250 VYNVGYSQARSYNEIVSILKEHLG-DF----KVTYIK  281 (362)
T ss_dssp             EEEESCSCEEEHHHHHHHHHHHHC-CC----EEECCC
T ss_pred             EEEeCCCCCccHHHHHHHHHHHcC-CC----ceEECC
Confidence            999999999999999999999999 65    554444

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-35  Score=241.25  Aligned_cols=242  Identities=18%  Similarity=0.202  Sum_probs=193.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++++++|+++|++|++++|+........     ..+.. ...++.++.+|++|.+++.++++..++|+|||+
T Consensus        11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A           11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-----ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-----HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-----HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            799999999999999999999999999876532111     11111 124789999999999999999987789999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh
Q 024575           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~  140 (265)
                      |+..                ..++.+++++++  ++++||++||..+||.....+++|+.+..|.+.| .+|..+|.+++
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  165 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR  165 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                234677888877  6789999999999998888889999888888777 99999999885


Q ss_pred             h----c-CCceeEeecceeeCCCC-----------CCchhHHHHHHHHcC-CcccCCC------CCCceeeeeeHHHHHH
Q 024575          141 S----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR  197 (265)
Q Consensus       141 ~----~-~~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~  197 (265)
                      .    . +++++++||+++|||+.           ...+...+....... ..+.+++      ++++.++++|++|+|+
T Consensus       166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~  245 (341)
T 3enk_A          166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR  245 (341)
T ss_dssp             HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence            3    3 49999999999999853           133444444433332 3444445      7788999999999999


Q ss_pred             HHHHHhcCc--cccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCc
Q 024575          198 AFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +++.+++++  ...+++||+++++.+|+.|+++.+.+.+|.+.    ++...+...
T Consensus       246 a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~~~~  297 (341)
T 3enk_A          246 GHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV----PYELVARRP  297 (341)
T ss_dssp             HHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC----CEEEECCCT
T ss_pred             HHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc----ceeeCCCCC
Confidence            999999873  34578999999999999999999999999987    666665443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=8.4e-35  Score=236.58  Aligned_cols=231  Identities=23%  Similarity=0.265  Sum_probs=188.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|........+           ..+++++.+|++|.+++.++++..++|+|||++
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            799999999999999999999999998544322111           146788999999999999988755799999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecc-eeeec-CCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~-~~~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +..                ..++.+++++++  ++++||++||. .+||. ....+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            863                234667888876  67899999999 89986 555677888777777766 9999999987


Q ss_pred             h----hcCCceeEeecceeeCCCCC----CchhHHHHHHHHcCCcccCC-----CCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          140 E----SKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       140 ~----~~~~~~~i~r~~~i~g~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      +    +.+++++++||+++|||+..    ..++..++..+..+.++.++     +++.+.++++|++|+|++++.+++++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            4    46899999999999999753    23556677777777766555     77788899999999999999998764


Q ss_pred             cccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          207 KASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                         ++.||+++++.+|+.|+++.+.+.+|.+.    ++...+.
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~~  270 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAP----EVQPAPP  270 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCC----CEEEECC
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCC----CceeCCC
Confidence               68999999999999999999999999876    5555544

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.6e-34  Score=236.77  Aligned_cols=233  Identities=18%  Similarity=0.262  Sum_probs=187.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|........+           ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            799999999999999999999999999765432222           147889999999999999998766899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +...                .++.+++++++  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            8642                34677888876  7789999999999998777788998888887777 999999998753


Q ss_pred             ----cCCceeEeecceeeCCCC----------CCchhHHHHHHHHc-CCcccCCC------CCCceeeeeeHHHHHHHHH
Q 024575          142 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       142 ----~~~~~~i~r~~~i~g~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D~a~~~~  200 (265)
                          .+++++++||+++|||+.          ...++..++..... +..+.+++      ++++.++++|++|+|++++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence                489999999999999962          12345555544433 23444444      5678899999999999999


Q ss_pred             HHhcCccc--cCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeC
Q 024575          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      .+++++..  .+++||+++++.+|+.|+++.+.+.+|.+.    ++...+
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~  281 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEI----PAEVAP  281 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCC----CEEEEC
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCC----ceeeCC
Confidence            99976532  367999999999999999999999999876    554444

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=9.6e-35  Score=242.28  Aligned_cols=225  Identities=19%  Similarity=0.262  Sum_probs=180.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++++++|+++| ++|++++|++......+..         ..+++++.+|++|.+.+.++++  ++|+|||+
T Consensus        38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~---------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~  106 (377)
T 2q1s_A           38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVRFSETSITDDALLASLQD--EYDYVFHL  106 (377)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC---------CTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred             ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC---------CCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence            7999999999999999999 9999999987653222221         2578999999999999999998  99999999


Q ss_pred             CCCC----------------ccchHHHHHhCC---CCCcEEEEecceeeecCCCCCCC--CCC---CC-Cccccc-cchh
Q 024575           80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL  133 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~--e~~---~~-~~~~~~-~~k~  133 (265)
                      |+..                ..++.+++++++   ++++|||+||..+|+.....+++  |+.   +. .|.+.| .+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            9864                234678888876   36899999999999977666677  766   54 566666 9999


Q ss_pred             hHHHHHhh----cCCceeEeecceeeCCCC---------C-----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       134 ~~E~~~~~----~~~~~~i~r~~~i~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      .+|.+++.    .+++++++||+++|||+.         .     ..++..++..+..+.++.+++++++.+++++++|+
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  266 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV  266 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence            99998853    489999999999999976         2     35667778888888877777888899999999999


Q ss_pred             HHH-HHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          196 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       196 a~~-~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |++ ++.+++++. .+ +||+++++.+|+.|+++.+.+.+|.+.
T Consensus       267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~  308 (377)
T 2q1s_A          267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNT  308 (377)
T ss_dssp             HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            999 999998765 46 999999999999999999999999876

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.3e-34  Score=236.47  Aligned_cols=222  Identities=18%  Similarity=0.184  Sum_probs=185.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|++.. ..              .+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            7999999999999999999999999998654 11              16788999999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC---CCCcEEEEecceeeecC--CCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~--~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      +...                .++.+++++++   ++++||++||..+|+..  ...+++|+.+..|.+.| .+|..+|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            8642                23667888876   48999999999999876  56788888887777777 999999998


Q ss_pred             Hhh----cCCceeEeecceeeCCCCCC-chhHHHHHHHHc---C--CcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       139 ~~~----~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      ++.    .+++++++||+++|||+... .+...++..+..   +  ..+..+++++..+++++++|+|++++.+++++. 
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  241 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-  241 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-
Confidence            854    38999999999999998643 345556666555   5  455556777889999999999999999998763 


Q ss_pred             cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          209 SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       209 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      .++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  271 (321)
T 2pk3_A          242 TGDVYNVCSGIGTRIQDVLDLLLAMANVKI  271 (321)
T ss_dssp             TTCEEEESCSCEEEHHHHHHHHHHHSSSCC
T ss_pred             CCCeEEeCCCCCeeHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999876

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2.2e-34  Score=238.02  Aligned_cols=235  Identities=21%  Similarity=0.206  Sum_probs=191.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||+++++.|++.|++|++++|++......+... ...+.. ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~  109 (352)
T 1sb8_A           33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ  109 (352)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH-hhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence            799999999999999999999999999765311111000 000000 02578999999999999999999  99999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh
Q 024575           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~  140 (265)
                      |+..                ..++.++++++.  ++++||++||..+|+.....+.+|+.+..|.+.| .+|..+|.+++
T Consensus       110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  189 (352)
T 1sb8_A          110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD  189 (352)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                234678888876  7889999999999998777788898888887777 99999999874


Q ss_pred             ----hcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc-cccC
Q 024575          141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR  210 (265)
Q Consensus       141 ----~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~  210 (265)
                          +.+++++++||+++|||+...     .++..++..+..+.++.+++++++.+++++++|+|++++.++..+ ...+
T Consensus       190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~  269 (352)
T 1sb8_A          190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN  269 (352)
T ss_dssp             HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred             HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence                358999999999999997532     456667777777877766788889999999999999999988763 4467


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHh---CCCc
Q 024575          211 QVFNISGEKYVTFDGLARACAKVT---GLLD  238 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~---g~~~  238 (265)
                      ++||+++++.+|+.|+++.+.+.+   |.+.
T Consensus       270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~  300 (352)
T 1sb8_A          270 QVYNIAVGGRTSLNQLFFALRDGLAENGVSY  300 (352)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHHHTTCCC
T ss_pred             ceEEeCCCCCccHHHHHHHHHHHHHhcCCCC
Confidence            899999999999999999999999   8876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=6e-35  Score=234.70  Aligned_cols=211  Identities=21%  Similarity=0.196  Sum_probs=182.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      || +||+|+++++.|+++|++|++++|++...               ..+++++.+|++|.+.+.++++. ++|+|||+|
T Consensus         9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a   71 (286)
T 3gpi_A            9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-RPEILVYCV   71 (286)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-CCSEEEECH
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-CCCEEEEeC
Confidence            68 59999999999999999999999987652               26889999999999999998882 499999998


Q ss_pred             CC-----------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhcCCce
Q 024575           81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (265)
Q Consensus        81 ~~-----------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~~  146 (265)
                      +.           |..++.+++++++  ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|.+ ++. +++
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~  149 (286)
T 3gpi_A           72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSS  149 (286)
T ss_dssp             HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence            74           4556889999988  7899999999999998888888999998888887 999999999 777 999


Q ss_pred             eEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCCccCHH
Q 024575          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTFD  224 (265)
Q Consensus       147 ~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~  224 (265)
                      +++||+++|||+..     .++..+.. ..  .+++++..++++|++|+|++++.+++++  ...+++||+++++.+|+.
T Consensus       150 ~ilR~~~v~G~~~~-----~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          150 TILRFSGIYGPGRL-----RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             EEEEECEEEBTTBC-----HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             EEEecccccCCCch-----hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHH
Confidence            99999999999743     34445544 32  2367788999999999999999999875  445789999999999999


Q ss_pred             HHHHHHHHHhCCCc
Q 024575          225 GLARACAKVTGLLD  238 (265)
Q Consensus       225 el~~~i~~~~g~~~  238 (265)
                      |+++.+++.+|.+.
T Consensus       222 e~~~~i~~~~g~~~  235 (286)
T 3gpi_A          222 DLLRWLADRQGIAY  235 (286)
T ss_dssp             HHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHcCCCC
Confidence            99999999999886

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.8e-34  Score=236.44  Aligned_cols=218  Identities=18%  Similarity=0.196  Sum_probs=178.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|++|++++|++... ..+.          ..+++++.+|++|.+++.++++  ++|+|||+|
T Consensus        19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a   85 (342)
T 2x4g_A           19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQI-QRLA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA   85 (342)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG-GGGG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecChHhh-hhhc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999987652 1111          1478999999999999999998  999999999


Q ss_pred             CCC--------------ccchHHHHHhCC--CCCcEEEEecceeeecCCC--CCCCCCCCCCc----cccc-cchhhHHH
Q 024575           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~~--------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~--~~~~e~~~~~~----~~~~-~~k~~~E~  137 (265)
                      +..              ..++.++++++.  ++++|||+||..+|+....  .+ +|+.+..|    .+.| .+|..+|.
T Consensus        86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~  164 (342)
T 2x4g_A           86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE  164 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence            853              234678888877  7899999999999986554  44 78877777    6666 99999999


Q ss_pred             HHhh---cCCceeEeecceeeCCCC-CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceE
Q 024575          138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (265)
Q Consensus       138 ~~~~---~~~~~~i~r~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (265)
                      +++.   .+++++++||+++|||+. ... +..++..+..+....+   ++..+++++++|+|++++.+++++.. ++.|
T Consensus       165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            8854   389999999999999976 323 4556666666665443   55789999999999999999987655 7899


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCc
Q 024575          214 NISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       214 ~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |+++++ +|+.|+++.+.+.+|.+.
T Consensus       240 ~v~~~~-~s~~e~~~~i~~~~g~~~  263 (342)
T 2x4g_A          240 LLTGHN-LEMADLTRRIAELLGQPA  263 (342)
T ss_dssp             EECCEE-EEHHHHHHHHHHHHTCCC
T ss_pred             EEcCCc-ccHHHHHHHHHHHhCCCC
Confidence            999999 999999999999999887

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.9e-34  Score=235.82  Aligned_cols=226  Identities=19%  Similarity=0.240  Sum_probs=183.9

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++ |++|++++|++.+......          ..+++++.+|++| .+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih   73 (345)
T 2bll_A            6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (345)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence            799999999999999998 8999999998765322211          2578999999998 467888888  8999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC-------Cccccc-cchh
Q 024575           79 INGREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (265)
Q Consensus        79 ~a~~~~----------------~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (265)
                      +|+...                .++.+++++++ ..++|||+||.++|+.....+++|+.+.       .|.+.| .+|.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~  153 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHH
Confidence            998632                24667888876 3389999999999998766677777643       233455 8999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCC---------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|.+++    +.+++++++||+++|||+..         ..++..++..+..+..+.+++++++.++++|++|+|++++
T Consensus       154 ~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  233 (345)
T 2bll_A          154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHH
Confidence            9999874    45899999999999999753         2355667777777877777777888999999999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC-ccCHHHHHHHHHHHhCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~  238 (265)
                      .+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+.
T Consensus       234 ~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~  274 (345)
T 2bll_A          234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  274 (345)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred             HHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            9998764  457899999986 8999999999999999765

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1e-34  Score=236.48  Aligned_cols=224  Identities=16%  Similarity=0.202  Sum_probs=184.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|+      +....                ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A           12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            79999999999999999998      11111                245666789999999999999955699999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC----CCCcccc-c-cchhhH
Q 024575           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKLNT  135 (265)
Q Consensus        81 ~~~~-----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~----~~~~~~~-~-~~k~~~  135 (265)
                      +...                 .++.+++++++  ++++|||+||..+|+.....+++|+.    +..|..+ | .+|..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  149 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI  149 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence            8732                 24677899887  78899999999999988888888886    5566653 5 999999


Q ss_pred             HHHHh----hcCCceeEeecceeeCCCCC-----CchhHHHHHH----HHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       136 E~~~~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      |.+++    +.+++++++||+++|||+..     ..+++.++..    +..+..+.+++++++.++++|++|+|++++.+
T Consensus       150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  229 (319)
T 4b8w_A          150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV  229 (319)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence            99874    36899999999999999753     3456666666    67888888888899999999999999999999


Q ss_pred             hcCcc-ccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCC
Q 024575          203 LGNEK-ASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPK  250 (265)
Q Consensus       203 ~~~~~-~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  250 (265)
                      ++++. ..+++||+++++.+|+.|+++.+.+.+|.+.    ++...+..
T Consensus       230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~~~  274 (319)
T 4b8w_A          230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG----EVTFDTTK  274 (319)
T ss_dssp             HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS----CEEEETTS
T ss_pred             HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC----cEEeCCCC
Confidence            98743 3467999999999999999999999999887    66665543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=8.6e-34  Score=233.12  Aligned_cols=229  Identities=21%  Similarity=0.314  Sum_probs=188.9

Q ss_pred             CCccccchHHHHHHHHHc---C---CeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g---~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (265)
                      ||||||||++++++|+++   |   ++|++++|..... ...+..     +. ...+++++.+|++|.+.+.+++.  ++
T Consensus         6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~   77 (337)
T 1r6d_A            6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP-----VD-ADPRLRFVHGDIRDAGLLARELR--GV   77 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG-----GT-TCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhh-----cc-cCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence            799999999999999996   8   9999999975321 111110     00 02578999999999999999997  99


Q ss_pred             cEEEEcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhh
Q 024575           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (265)
Q Consensus        74 d~vi~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (265)
                      |+|||+|+..                ..++.++++++.  ++++|||+||..+||.....+++|+.+..|.+.| .+|..
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence            9999999863                235678888877  7789999999999987666678888877777777 99999


Q ss_pred             HHHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       135 ~E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      +|.+++    +.+++++++||+++|||+.. ..++..++.....+..+.+++++++.+++++++|+|++++.+++++. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            999874    35899999999999999854 35566677777777777777888889999999999999999987654 4


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          237 GEIYHIGGGLELTNRELTGILLDSLGADW  265 (337)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCCc
Confidence            78999999999999999999999999875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-34  Score=232.90  Aligned_cols=212  Identities=14%  Similarity=0.124  Sum_probs=184.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|+++++.|+++|++|++++|.                          .+|+.|.+.+.++++..++|+|||+|
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A           11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999992                          26889999999999866799999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +...                .++.+++++++  ++ +|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            8642                34678888887  55 7999999999998888899999999888877 999999999998


Q ss_pred             cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCcc
Q 024575          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (265)
Q Consensus       142 ~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (265)
                      ...+++++||+++|||+. ..+...++.....+..+..+++  +.++++|++|+|++++.+++++.  +++||+++++.+
T Consensus       144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            888999999999999974 3566777777777887776654  78999999999999999999876  679999999999


Q ss_pred             CHHHHHHHHHHHhCCCccccccceeeC
Q 024575          222 TFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       222 s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      |+.|+++.+.+.+|.+.    ++...+
T Consensus       219 s~~e~~~~i~~~~g~~~----~~~~~~  241 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMKV----NVLPVS  241 (287)
T ss_dssp             EHHHHHHHHHHHHTCCC----EEEEEC
T ss_pred             cHHHHHHHHHHHcCCCc----ceeeee
Confidence            99999999999999887    555544

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=5.5e-34  Score=237.83  Aligned_cols=230  Identities=19%  Similarity=0.235  Sum_probs=186.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|++..... ..          ..+++++.+|++|.+++.++++  ++|+|||+|
T Consensus        35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  101 (379)
T 2c5a_A           35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-ED----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA  101 (379)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GG----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCccHHHHHHHHHHHHCCCeEEEEECCCccchh-hc----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence            7999999999999999999999999998765221 11          2578999999999999999998  999999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCCcEEEEecceeeecCCC-----CCCCCCC--CCCccccc-cchh
Q 024575           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL  133 (265)
Q Consensus        81 ~~~~-----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~-----~~~~e~~--~~~~~~~~-~~k~  133 (265)
                      +...                 .++.+++++++  ++++|||+||..+|+....     .+++|++  +..|.+.| .+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            8532                 13567888876  7789999999999985432     3455655  44555556 9999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      .+|.+++    +.+++++++||+++|||+...     .+...++..+..+.. +.+++++++.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            9999874    358999999999999997532     256667777766665 666788888999999999999999999


Q ss_pred             cCccccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      +++  .++.||+++++.+|+.|+++.+.+.+|.+.    ++...|.
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~p~  301 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL----PIHHIPG  301 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC----CEEEECC
T ss_pred             hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCC----ceeeCCC
Confidence            876  367999999999999999999999999876    5555543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-33  Score=232.03  Aligned_cols=229  Identities=18%  Similarity=0.156  Sum_probs=186.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh--hhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++|++|++++|++.....       ..+..  ...+++++.+|++|.+++.++++..++|+|||
T Consensus        20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            7999999999999999999999999998764210       00110  12578999999999999999998546899999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CC-CcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           79 INGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        79 ~a~~~~----------------~~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      +|+...                .++.++++++.  ++ ++||++||.++|+.....+++|+.+..|.+.| .+|..+|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            998632                24667888877  64 89999999999998777788898888887777 999999998


Q ss_pred             Hhh----cCCceeEeecceeeCCCCCCch----hHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       139 ~~~----~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      ++.    .+++++++||+++|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.+++++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            753    4899999999999999754433    3445555556653 2345778899999999999999999998765  


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence            47999999999999999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.8e-33  Score=232.13  Aligned_cols=243  Identities=19%  Similarity=0.212  Sum_probs=187.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccC--CCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      ||||||||++++++|+++|++|++++|........  ..+ ....+.. ...+++++.+|++|.+++.++++..++|+||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   86 (348)
T 1ek6_A            8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPE-SLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVI   86 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBH-HHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHH-HHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            79999999999999999999999999875430000  000 0011111 1247899999999999999998855799999


Q ss_pred             EcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCc-cccc-cchhhHHH
Q 024575           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTES  137 (265)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~-~~k~~~E~  137 (265)
                      |+|+..                ..++.+++++++  ++++||++||..+|+.....+++|+.+..| .+.| .+|..+|.
T Consensus        87 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~  166 (348)
T 1ek6_A           87 HFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEE  166 (348)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHH
Confidence            999864                234677888876  778999999999999877778888887777 5556 99999999


Q ss_pred             HHhh---cC--CceeEeecceeeCCCC-----------CCchhHHHHHHHH-cCCcccCCC------CCCceeeeeeHHH
Q 024575          138 VLES---KG--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKD  194 (265)
Q Consensus       138 ~~~~---~~--~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D  194 (265)
                      +++.   .+  ++++++||+++|||+.           ...+...++.... .+..+.+++      ++++.++|+|++|
T Consensus       167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D  246 (348)
T 1ek6_A          167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD  246 (348)
T ss_dssp             HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred             HHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHH
Confidence            8753   24  9999999999999842           1345555666555 455555544      5678899999999


Q ss_pred             HHHHHHHHhcCcc-ccC-ceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeC
Q 024575          195 LARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTT  248 (265)
Q Consensus       195 ~a~~~~~~~~~~~-~~~-~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  248 (265)
                      +|++++.+++++. ..+ ++||+++++.+|+.|+++.+.+.+|.+.    ++...+
T Consensus       247 va~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~  298 (348)
T 1ek6_A          247 LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI----PYKVVA  298 (348)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC----CEEEEC
T ss_pred             HHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCC----ceeeCC
Confidence            9999999997652 233 7999999999999999999999999876    544444

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.3e-34  Score=234.85  Aligned_cols=225  Identities=20%  Similarity=0.305  Sum_probs=186.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc---cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      ||||||+|++++++|+++|++|++++|++..   ....+...      ....+++++.+|+.            ++|+||
T Consensus        13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~------------~~d~vi   74 (321)
T 3vps_A           13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF------LEKPVLELEERDLS------------DVRLVY   74 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEE------ECSCGGGCCHHHHT------------TEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhh------ccCCCeeEEeCccc------------cCCEEE
Confidence            7999999999999999999999999998762   11111110      00135566666654            899999


Q ss_pred             EcCCCC---------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           78 DINGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        78 ~~a~~~---------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      |+|+..               ..++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|.++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999863               234678888887  7899999999999998888899999998888877 9999999988


Q ss_pred             hh----cCC-ceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceE
Q 024575          140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (265)
Q Consensus       140 ~~----~~~-~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (265)
                      +.    .++ +++++||+++|||+.. ..+...++..+..++.+.+++++++.++++|++|+|++++.+++++.. | +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence            54    588 9999999999999854 356777888888888888888889999999999999999999998765 6 99


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCccccccceeeCCC
Q 024575          214 NISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPK  250 (265)
Q Consensus       214 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  250 (265)
                      |+++++.+|+.|+++.+. .+|.+.    ++...+..
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~----~~~~~~~~  264 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAA----EVARKQPR  264 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTC----EEEEECCC
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCC----ccccCCCC
Confidence            999999999999999999 999987    66665554

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.8e-33  Score=229.93  Aligned_cols=229  Identities=24%  Similarity=0.284  Sum_probs=185.2

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc-cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      ||||||||++++++|+++|  ++|++++|.+.. ....+....     . ..+++++.+|++|.+.+.+++.  ++|+||
T Consensus         9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~-----~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (336)
T 2hun_A            9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE-----D-DPRYTFVKGDVADYELVKELVR--KVDGVV   80 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT-----T-CTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc-----c-CCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence            7999999999999999986  899999997532 111111100     0 2578999999999999999997  999999


Q ss_pred             EcCCCCc----------------cchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           78 DINGREA----------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        78 ~~a~~~~----------------~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+|+...                .++.++++++.  + .++||++||..+||.....+++|+.+..|.+.| .+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            9998642                24667888876  4 379999999999997766778888877777777 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCce
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (265)
                      +++    +.+++++++||+++|||+.. ..+...++..+..+..+.+++++.+.+++++++|+|++++.+++++. .++.
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            875    36899999999999999854 34566677777777777777888888999999999999999987654 5789


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          213 FNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       213 ~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ||+++++.+|+.|+++.+.+.+|.+.
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGE  265 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCS
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=3.6e-33  Score=230.37  Aligned_cols=227  Identities=17%  Similarity=0.197  Sum_probs=186.4

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      ||||||||++++++|+++  |++|++++|++... ...+..     +.  ..+++++.+|++|.+.+.++++  ++|+||
T Consensus        10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~-----~~--~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (348)
T 1oc2_A           10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA-----IL--GDRVELVVGDIADAELVDKLAA--KADAIV   80 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG-----GC--SSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh-----hc--cCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence            799999999999999998  89999999976421 111110     00  2578999999999999999999  899999


Q ss_pred             EcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCC------------CCCCCCCCCCccc
Q 024575           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPKS  127 (265)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~------------~~~~e~~~~~~~~  127 (265)
                      |+|+..                ..++.++++++.  ++ +|||+||..+||....            .+++|+.+..|.+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            999864                234678888877  66 9999999999986532            5778887777777


Q ss_pred             cc-cchhhHHHHHhh----cCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          128 RH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       128 ~~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .| .+|..+|.+++.    .+++++++||+++|||+.. ..++..++.....+..+.+++++.+.+++++++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            77 999999998753    5899999999999999854 35566677777777776666788889999999999999999


Q ss_pred             HhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++++. .++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       240 ~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             HHHHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             HhhCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence            987653 578999999999999999999999999875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.1e-33  Score=232.57  Aligned_cols=231  Identities=15%  Similarity=0.177  Sum_probs=185.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|++........      ......+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A           15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE------TARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH------HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH------hhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999998765221100      0001257899999999999999999844599999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CCcEEEEecceeeecCCC-CCCCCCCCCCccccc-cchhhHHHHH
Q 024575           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~-~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +..                ..++.++++++.  + +++|||+||..+||.... .+..|+.+..|.+.| .+|..+|.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            852                234667888876  4 889999999999987553 466777676677666 9999999987


Q ss_pred             hhc-------------CCceeEeecceeeCCCCC--CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       140 ~~~-------------~~~~~i~r~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +..             +++++++||+++|||+..  ..++..++..+..+..+.+. ++++.++++|++|+|++++.+++
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence            432             899999999999999753  35677788888888776654 56788999999999999999886


Q ss_pred             C----ccccCceEEecCC--CccCHHHHHHHHHHHhCCCc
Q 024575          205 N----EKASRQVFNISGE--KYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ~----~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~  238 (265)
                      .    +...+++||++++  +.+|+.|+++.+.+.+|.+.
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~  287 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA  287 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence            4    2345779999974  68999999999999999876

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.9e-33  Score=236.51  Aligned_cols=243  Identities=19%  Similarity=0.193  Sum_probs=185.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcccc------CCCCCC--hhHH----hhhhccceEEEecCCChHHHHHHh
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGES--DQEF----AEFSSKILHLKGDRKDYDFVKSSL   68 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~------~~~~~~--~~~~----~~~~~~~~~~~~D~~~~~~~~~~~   68 (265)
                      ||||||||++++++|+++|++|++++|.......      .+....  ...+    .....+++++.+|++|.+.+.+++
T Consensus        17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   96 (404)
T 1i24_A           17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   96 (404)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence            7999999999999999999999999986432100      000000  0000    011257899999999999999999


Q ss_pred             hccCccEEEEcCCCC-------------------ccchHHHHHhCC--CC-CcEEEEecceeeecCCCCCCCCC------
Q 024575           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------  120 (265)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~~~~e~------  120 (265)
                      +..++|+|||+|+..                   ..++.++++++.  +. ++||++||.++||... .+.+|+      
T Consensus        97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~  175 (404)
T 1i24_A           97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH  175 (404)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred             hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence            843499999999863                   123567888876  55 5999999999998654 355554      


Q ss_pred             --------CCCCccccc-cchhhHHHHHhh----cCCceeEeecceeeCCCCC------------------CchhHHHHH
Q 024575          121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (265)
Q Consensus       121 --------~~~~~~~~~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~~------------------~~~~~~~~~  169 (265)
                              .+..|.+.| .+|..+|.+++.    .+++++++||+++|||+..                  ..++..++.
T Consensus       176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (404)
T 1i24_A          176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  255 (404)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence                    244556666 999999998743    4899999999999999753                  345677888


Q ss_pred             HHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC--ceEEecCCCccCHHHHHHHHHHH---hCCCccccccc
Q 024575          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGLLDFRSLNL  244 (265)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~i~~~~~~s~~el~~~i~~~---~g~~~~~~~~~  244 (265)
                      .+..++.+.+++++.+.++++|++|+|++++.+++++...+  ++||+++ +.+|+.|+++.+.+.   +|.+.    ++
T Consensus       256 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~----~~  330 (404)
T 1i24_A          256 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDV----KK  330 (404)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCC----CE
T ss_pred             HHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCc----cc
Confidence            88888877777888899999999999999999998765445  7999998 889999999999998   78776    44


Q ss_pred             eeeCC
Q 024575          245 CTTTP  249 (265)
Q Consensus       245 ~~~~~  249 (265)
                      ...|.
T Consensus       331 ~~~p~  335 (404)
T 1i24_A          331 MTVPN  335 (404)
T ss_dssp             EEECC
T ss_pred             cccCc
Confidence            44443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4.1e-33  Score=228.39  Aligned_cols=221  Identities=18%  Similarity=0.190  Sum_probs=182.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||+||++++++|+++|++|++++|+..........         ..+++++.+|++|.+++.++++..++|+|||+|
T Consensus        26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999999999999976543211111         157889999999999999988755899999999


Q ss_pred             CCCc-------------cchHHHHHhCC--CCCcEEEEecceeeecCCCC--CCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~~-------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~--~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +...             .++.++++++.  ++++||++||..+|+.....  +++|+.  .|.+.| .+|..+|.+++..
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence            8642             34667888876  78899999999999865443  666765  455556 9999999999888


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH-HHHHHhcCccccCceEEecCCCcc
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYV  221 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~~~~~~~~~~~~~i~~~~~~  221 (265)
                      +++++++||+++|||+....+...++..+..+.  ..++++. .+++++++|+|+ +++.+++++.  ++.||+++++.+
T Consensus       175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGH  249 (330)
T ss_dssp             SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCE
T ss_pred             CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCC
Confidence            999999999999999865566666666666665  4455666 889999999999 9999998754  789999999999


Q ss_pred             CHHHHHHHHHHHhCCC
Q 024575          222 TFDGLARACAKVTGLL  237 (265)
Q Consensus       222 s~~el~~~i~~~~g~~  237 (265)
                      |+.|+++.+.+.+|.+
T Consensus       250 s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             EHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHhCCC
Confidence            9999999999999986

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=3.6e-33  Score=234.33  Aligned_cols=243  Identities=20%  Similarity=0.267  Sum_probs=184.2

Q ss_pred             CCccccchHHHHHHHH-HcCCeEEEEEcCCCcccc-CCCCCChhHH----hhh-----hcc---ceEEEecCCChHHHHH
Q 024575            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQ-QLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKS   66 (265)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~-~~~~~~~~~~----~~~-----~~~---~~~~~~D~~~~~~~~~   66 (265)
                      ||||||||++++++|+ +.|++|++++|....... .... ....+    ...     ..+   ++++.+|++|.+.+.+
T Consensus         8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   86 (397)
T 1gy8_A            8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVE-TRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNG   86 (397)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSC-CHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccc-hHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHH
Confidence            7999999999999999 999999999997654200 0000 00011    000     124   8899999999999999


Q ss_pred             HhhccC-ccEEEEcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCC-------CCCCCCC
Q 024575           67 SLSAKG-FDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCET  120 (265)
Q Consensus        67 ~~~~~~-~d~vi~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~-------~~~~~e~  120 (265)
                      +++..+ +|+|||+|+..                ..++.+++++++  ++++|||+||.++|+...       ..+++|+
T Consensus        87 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~  166 (397)
T 1gy8_A           87 VFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDIN  166 (397)
T ss_dssp             HHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTT
T ss_pred             HHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCcc
Confidence            887556 99999999864                234677888876  778999999999998765       5778888


Q ss_pred             CCCCccccc-cchhhHHHHHhh----cCCceeEeecceeeCCCC----------CCchhHHHH----HHHHcCC------
Q 024575          121 DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR------  175 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~----------~~~~~~~~~----~~~~~~~------  175 (265)
                      .+..|.+.| .+|..+|.+++.    .+++++++||+++|||+.          ...++..++    ..+..+.      
T Consensus       167 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (397)
T 1gy8_A          167 AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHE  246 (397)
T ss_dssp             SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-------
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCcccccc
Confidence            887777767 999999998753    489999999999999963          233444444    1333332      


Q ss_pred             ------cccCCC------CCCceeeeeeHHHHHHHHHHHhcCcccc-----C---ceEEecCCCccCHHHHHHHHHHHhC
Q 024575          176 ------PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       176 ------~~~~~~------~~~~~~~~i~~~D~a~~~~~~~~~~~~~-----~---~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                            .+.+++      ++++.++|+|++|+|++++.+++.+...     +   ++||+++++.+|+.|+++.+.+.+|
T Consensus       247 ~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  326 (397)
T 1gy8_A          247 DASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTG  326 (397)
T ss_dssp             ----CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHC
T ss_pred             ccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhC
Confidence                  344444      6778899999999999999998765322     3   7999999999999999999999999


Q ss_pred             CCccccccceeeC
Q 024575          236 LLDFRSLNLCTTT  248 (265)
Q Consensus       236 ~~~~~~~~~~~~~  248 (265)
                      .+.    ++...+
T Consensus       327 ~~~----~~~~~~  335 (397)
T 1gy8_A          327 HPI----PVRECG  335 (397)
T ss_dssp             CCC----CEEEEC
T ss_pred             CCC----CeeeCC
Confidence            876    555444

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-34  Score=232.67  Aligned_cols=222  Identities=16%  Similarity=0.190  Sum_probs=169.0

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d~v   76 (265)
                      ||||||+|++++++|+++| ++|++++|.+....  .     ..    ..++. +.+|+++.+.+.++++.   .++|+|
T Consensus         5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-----~~----~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F-----VN----LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--G-----HH----HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--h-----hh----cCcce-eccccccHHHHHHHHhccccCCCcEE
Confidence            7999999999999999999 99999999865421  0     00    12334 78999999999988872   149999


Q ss_pred             EEcCCCCc--------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        77 i~~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      ||+|+...              .++.+++++++  ++ +||++||..+|+.....+.+|+.+..|.+.| .+|..+|.++
T Consensus        73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            99998632              24678888877  77 9999999999998776688888888887777 9999999988


Q ss_pred             hh----cCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCc-eeeeeeHHHHHHHHHHHhcCcccc
Q 024575          140 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       140 ~~----~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      +.    .+++++++||+++|||+..     ..++..++..+..++.+.+++++++ .++++|++|+|++++.+++++.  
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            53    4799999999999999753     3566777888888887777788888 8999999999999999998765  


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      ++.||+++++.+|+.|+++.+.+.+|.+
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999976

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=6e-34  Score=228.87  Aligned_cols=211  Identities=20%  Similarity=0.231  Sum_probs=175.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||| ||+|++++++|+++|++|++++|++.+.. .+.          ..+++++.+|++|.+     +.  ++|+|||++
T Consensus        11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a   71 (286)
T 3ius_A           11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-AIR----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST   71 (286)
T ss_dssp             ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-HHH----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-hHh----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence            698 99999999999999999999999876521 111          267999999999855     55  999999999


Q ss_pred             CCCcc---chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc-CCceeEeec
Q 024575           81 GREAD---EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP  151 (265)
Q Consensus        81 ~~~~~---~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~-~~~~~i~r~  151 (265)
                      +....   .+.+++++++    ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|.++++. +++++++||
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp  151 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL  151 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence            87533   3567777754    6789999999999998888889999999888877 9999999999887 999999999


Q ss_pred             ceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHH
Q 024575          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (265)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~  231 (265)
                      +++|||+...      +..+..+....+.+. .+.++++|++|+|++++.+++++. .+++||+++++.+|+.|+++.+.
T Consensus       152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~  223 (286)
T 3ius_A          152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA  223 (286)
T ss_dssp             CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred             cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence            9999997432      123334554444443 578899999999999999999877 47799999999999999999999


Q ss_pred             HHhCCCc
Q 024575          232 KVTGLLD  238 (265)
Q Consensus       232 ~~~g~~~  238 (265)
                      +.+|.+.
T Consensus       224 ~~~g~~~  230 (286)
T 3ius_A          224 ELQGLPL  230 (286)
T ss_dssp             HHHTCCC
T ss_pred             HHcCCCC
Confidence            9999876

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=5.9e-33  Score=227.78  Aligned_cols=219  Identities=21%  Similarity=0.247  Sum_probs=179.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|++.|++|++++|++......+..         ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            79999999999999999999999999986543222221         147889999999999999999833499999999


Q ss_pred             CCCc-------------cchHHHHHhCC--CCCcEEEEecceeee----cCCCCCCCCCCCCCcc-ccc-cchhhHHHHH
Q 024575           81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-SRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~~-------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~----~~~~~~~~e~~~~~~~-~~~-~~k~~~E~~~  139 (265)
                      +...             .++.++++++.  ++++||++||..+|+    .... +++|+.  .|. +.| .+|..+|.++
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~  174 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL  174 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence            8643             34667888876  778999999999998    5444 677766  555 555 9999999999


Q ss_pred             hh-cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCC
Q 024575          140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE  218 (265)
Q Consensus       140 ~~-~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~  218 (265)
                      +. .. +++++||+++|||+....+...++.....+.  .+++ ++..+++++++|+|++++.+++++.  +++||++++
T Consensus       175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~  248 (333)
T 2q1w_A          175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSG  248 (333)
T ss_dssp             HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCS
T ss_pred             HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCC
Confidence            87 66 9999999999999854456666777766665  3445 5678999999999999999998765  789999999


Q ss_pred             CccCHHHHHHHHHHHhCCC
Q 024575          219 KYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       219 ~~~s~~el~~~i~~~~g~~  237 (265)
                      +.+|+.|+++.+.+.+|.+
T Consensus       249 ~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          249 TDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             CCEEHHHHHHHHHHHTTCS
T ss_pred             CCccHHHHHHHHHHHhCCC
Confidence            9999999999999999986

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-33  Score=229.67  Aligned_cols=240  Identities=20%  Similarity=0.285  Sum_probs=183.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||+++++.|++.|++|++++|.........    ...+.. ..+++++.+|++|.+++.++++..++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN----LHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH----HHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhh----hhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            799999999999999999999999998642211000    000111 246899999999999999999833499999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCC-cEEEEecceeeecCCCCC----------------CCCCCCCCc
Q 024575           81 GREA----------------DEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVDP  125 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~-~~v~~Ss~~~~~~~~~~~----------------~~e~~~~~~  125 (265)
                      +...                .++.++++++.  +++ +||++||..+|+.....+                .+|+.+..|
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  161 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  161 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC
Confidence            8632                24667888876  564 899999999998654432                455556666


Q ss_pred             cccc-cchhhHHHHHhh----cCCceeEeecceeeCCCCCC----chhHHHHHHHHcCC-----cccCCCCCCceeeeee
Q 024575          126 KSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLGH  191 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~  191 (265)
                      .+.| .+|..+|.+++.    .+++++++||+++|||+...    .++..++.....+.     ++..++++++.+++++
T Consensus       162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  241 (347)
T 1orr_A          162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  241 (347)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEE
Confidence            6666 999999998854    48999999999999997532    34555555555444     5566688889999999


Q ss_pred             HHHHHHHHHHHhcC-ccccCceEEecCCC--ccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          192 VKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       192 ~~D~a~~~~~~~~~-~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      ++|+|++++.++++ +...|+.||++++.  .+|+.|+++.+.+.+|.+.    ++...+.
T Consensus       242 v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~~  298 (347)
T 1orr_A          242 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM----RFTNLPV  298 (347)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC----CEEEECC
T ss_pred             HHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC----CceeCCC
Confidence            99999999999986 33457899999986  4999999999999999886    5555553

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=2.4e-33  Score=228.99  Aligned_cols=220  Identities=21%  Similarity=0.307  Sum_probs=180.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|++|+++.|+.                         .+|++|.+++.++++..++|+|||+|
T Consensus         9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            79999999999999999999999987752                         25899999999988766899999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC----CCCcc-ccc-cchhhH
Q 024575           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK-SRH-KGKLNT  135 (265)
Q Consensus        81 ~~~~-----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~----~~~~~-~~~-~~k~~~  135 (265)
                      +...                 .++.+++++++  ++++|||+||..+|+.....+++|++    +..|. +.| .+|..+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence            8642                 24667888876  77899999999999987777788876    45553 345 999999


Q ss_pred             HHHHhh----cCCceeEeecceeeCCCCC-----CchhHHHHHHHHc----C-CcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       136 E~~~~~----~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      |.+++.    .+++++++||+++|||+..     ..++..++..+..    + ..+.+++++++.++++|++|+|++++.
T Consensus       144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            998854    5899999999999999754     2566666666653    3 466666788899999999999999999


Q ss_pred             HhcCcccc--------CceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          202 VLGNEKAS--------RQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       202 ~~~~~~~~--------~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      +++++...        +++||+++++.+|+.|+++.+.+.+|.+.    ++...+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~~  275 (321)
T 1e6u_A          224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG----RVVFDAS  275 (321)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS----EEEEETT
T ss_pred             HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC----ceEeCCC
Confidence            99876542        57999999999999999999999999886    5555443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.6e-33  Score=227.85  Aligned_cols=210  Identities=17%  Similarity=0.154  Sum_probs=179.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+ +|++|++++|++.                      ++.+|++|.+.+.++++..++|+|||+|
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999 8999999999752                      2478999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +...                .++.+++++++  ++ +|||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            8632                34678999987  54 8999999999998777788999888888777 999999999988


Q ss_pred             cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc--c-cCceEEecCC
Q 024575          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A-SRQVFNISGE  218 (265)
Q Consensus       142 ~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~-~~~~~~i~~~  218 (265)
                      ...+++++||+++|||+.. .+...++..+..+..+..+++  +.++++|++|+|++++.+++++.  . .++.||++++
T Consensus       142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            7789999999999999754 566677777777776665553  78999999999999999998762  2 4789999999


Q ss_pred             CccCHHHHHHHHHHHhCCC
Q 024575          219 KYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       219 ~~~s~~el~~~i~~~~g~~  237 (265)
                      +.+|+.|+++.+.+.+|.+
T Consensus       219 ~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCC
Confidence            9999999999999999876

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=5.6e-33  Score=230.04  Aligned_cols=221  Identities=17%  Similarity=0.204  Sum_probs=184.1

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc---CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~d~   75 (265)
                      ||||||||++++++|+++| ++|++++|++.... ..+            .++. +.+|+++.+.+.++++..   ++|+
T Consensus        52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence            7999999999999999999 99999999865521 111            2333 778999999999888731   5999


Q ss_pred             EEEcCCCCc--------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           76 VYDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        76 vi~~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      |||+|+...              .++.++++++.  ++ +||++||..+|+.....+++|+.+..|.+.| .+|..+|.+
T Consensus       119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence            999998632              24678888877  77 9999999999998777788888888887777 999999998


Q ss_pred             Hhh----cCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCc-eeeeeeHHHHHHHHHHHhcCccc
Q 024575          139 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       139 ~~~----~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      ++.    .+++++++||+++|||+..     ..++..++..+..+..+.+++++.+ .+++++++|+|++++.+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            853    4799999999999999754     3566677777777877666677888 8999999999999999998765 


Q ss_pred             cCceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          209 SRQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       209 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                       +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             -CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             -CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence             7899999999999999999999999986

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-33  Score=224.60  Aligned_cols=212  Identities=19%  Similarity=0.186  Sum_probs=179.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++++++|+++|++|++++|+                          .+|++|.+++.++++..++|+|||+|
T Consensus        18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999985                          25889999999998855799999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +...                .++.++++++.  ++ +|||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            8642                24678888877  66 9999999999998777788898888887777 999999999988


Q ss_pred             cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCcc
Q 024575          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (265)
Q Consensus       142 ~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (265)
                      .+.+++++||+++|||  ...+...++.....+..+...+  ++.+++++++|+|++++.+++++  .++.||+++++.+
T Consensus       151 ~~~~~~~lR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGD--GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESS--SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCC--CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            8889999999999999  3456666777777777665544  47899999999999999999876  4789999999999


Q ss_pred             CHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          222 TFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       222 s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      |+.|+++.+.+.+|.+.    ++...+.
T Consensus       225 s~~e~~~~i~~~~g~~~----~~~~~~~  248 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDV----KVTPCTT  248 (292)
T ss_dssp             EHHHHHHHHHHHHCCCC----EEEEECS
T ss_pred             cHHHHHHHHHHHhCCCC----ceeeccc
Confidence            99999999999999876    5544443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.3e-32  Score=225.19  Aligned_cols=229  Identities=19%  Similarity=0.281  Sum_probs=182.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|++.|++|++++|........+..     +. ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~-~~~~~~~~~~D~~~~~-----~~--~~d~vih~A   99 (343)
T 2b69_A           33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-----WI-GHENFELINHDVVEPL-----YI--EVDQIYHLA   99 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-----GT-TCTTEEEEECCTTSCC-----CC--CCSEEEECC
T ss_pred             EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhh-----hc-cCCceEEEeCccCChh-----hc--CCCEEEECc
Confidence            79999999999999999999999999976542211110     00 0257889999998753     44  899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCC-----CCCCccccc-cchhhHH
Q 024575           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~E  136 (265)
                      +...                .++.+++++++  ++ +||++||..+|+.....+.+|+     .+..|.+.| .+|..+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            8632                23667888877  54 9999999999997766677776     344555556 9999999


Q ss_pred             HHHh----hcCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       137 ~~~~----~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      .+++    +.+++++++||+++|||+..   ..++..++.....++.+.+++++++.+++++++|+|++++.+++.+.  
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--  256 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--  256 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence            9874    45899999999999999753   35666777777778777777888899999999999999999988653  


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      ++.||+++++.+|+.|+++.+.+.+|.+.    ++...+.
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~----~~~~~p~  292 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSE  292 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCC----CEEEECC
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCC----CceeCCC
Confidence            57999999999999999999999999887    5555554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=9.5e-33  Score=224.52  Aligned_cols=221  Identities=14%  Similarity=0.093  Sum_probs=177.3

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++  |++|++++|++... .            ...+++++.+|++|.+++.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~------------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-D------------VVNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-H------------HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-c------------ccCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999999  89999999986551 0            02467899999999999999998668999999


Q ss_pred             cCCCCc---------------cchHHHHHhCC--CCCcEEEEecceeeecCC-CCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           79 INGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        79 ~a~~~~---------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~-~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +|+...               .++.+++++++  ++++|||+||..+|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            998632               34667888876  778999999999998643 3467777777777777 9999999987


Q ss_pred             h----hcCCceeEeecceeeCCCCC------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc-
Q 024575          140 E----SKGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-  208 (265)
Q Consensus       140 ~----~~~~~~~i~r~~~i~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-  208 (265)
                      +    +.+++++++||+++|||+..      ..+...+.... .++.+..++++++.++++|++|+|++++.+++++.. 
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHH-HTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHH-cCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence            4    35899999999999997531      11333333333 444455567788899999999999999999987653 


Q ss_pred             --cCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          209 --SRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       209 --~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                        .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             CCCSSCEECCS-EEECHHHHHHHHHTTCTT
T ss_pred             cccCceEEeCC-CccCHHHHHHHHHHHCCC
Confidence              247999997 889999999999999983

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=2.5e-32  Score=224.48  Aligned_cols=233  Identities=22%  Similarity=0.289  Sum_probs=177.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++++++|+++|++|++++|.........     ..+... ..++.++.+|++|++.+.++++..++|+|||+
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            799999999999999999999999987543311110     111111 24688999999999999999875569999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCc-cccc-cchhhHHHHH
Q 024575           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESVL  139 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~-~~k~~~E~~~  139 (265)
                      |+..                ..++.+++++++  ++++||++||..+|+.....+.+|+.+..| .+.| .+|..+|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            9863                234567888876  788999999999998776677788776644 4555 9999999987


Q ss_pred             hh----c-CCceeEeecceeeCCCC-----------CCchhHHHHHHHH-cCCcccCCC------CCCceeeeeeHHHHH
Q 024575          140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA  196 (265)
Q Consensus       140 ~~----~-~~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a  196 (265)
                      +.    . +++++++||+++|||+.           ...+...+..... .+..+.+++      ++.+.++++|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            43    3 79999999999999842           1234445544444 233333322      567889999999999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++++.+++.+  ...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~  284 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV  284 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            9999988753  22237999999999999999999999999876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=6.6e-33  Score=225.79  Aligned_cols=215  Identities=20%  Similarity=0.186  Sum_probs=163.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|++++|+...                 .+  ++.+|++|.+.+.++++..++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999999999987543                 12  6789999999999998844599999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +..                ..++.++++++.  ++ +|||+||..+|+. ...+++|+.+..|.+.| .+|..+|.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            852                334678888877  55 9999999999987 56678888887777777 999999999998


Q ss_pred             cCCceeEeecceeeCCCCCC--chhHHHHHHHH-cCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc---cccCceEEe
Q 024575          142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (265)
Q Consensus       142 ~~~~~~i~r~~~i~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i  215 (265)
                      .+++++++||+.+|||....  .++..++.... .+..+...  +++.+++++++|+|++++.+++++   ...++.||+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            89999999999999997542  44555666665 56555443  357789999999999999998754   245789999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCc
Q 024575          216 SGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       216 ~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++++.+|+.|+++.+.+.+|.+.
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~  247 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPS  247 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCC
T ss_pred             cCCCcccHHHHHHHHHHHhCCCh
Confidence            99999999999999999999876

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=3e-32  Score=225.91  Aligned_cols=231  Identities=21%  Similarity=0.236  Sum_probs=186.0

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCc-cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|++. |++|++++|+... ....+....     . ..+++++.+|++|.+.+.++++..++|+|||
T Consensus         6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-----E-SNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-----T-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhh-----c-CCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998 7999999997632 111121100     0 2578999999999999999987568999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC----CCC-------cEEEEecceeeecCCC--C--------CCCCCC
Q 024575           79 INGRE----------------ADEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD  121 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~----~~~-------~~v~~Ss~~~~~~~~~--~--------~~~e~~  121 (265)
                      +|+..                ..++.++++++.    +++       +||++||..+||....  .        +++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            99864                234667888765    455       9999999999986532  1        677877


Q ss_pred             CCCccccc-cchhhHHHHHhh----cCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      +..|.+.| .+|..+|.+++.    .+++++++||+++|||+.. ..++..++.....+..+.+++++.+.+++++++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            77777767 999999998753    4899999999999999854 34566677777777777777888889999999999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |++++.+++++. .++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcC
Confidence            999999997654 578999999999999999999999998764

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-32  Score=224.50  Aligned_cols=235  Identities=17%  Similarity=0.149  Sum_probs=183.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcccc-CCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++|++|++++|++..... .+.... ..... ...+++++.+|++|.+++.++++..++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih  108 (375)
T 1t2a_A           30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLY-KNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYN  108 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHh-hhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998754211 111000 00000 12578899999999999999998546899999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CC---CcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHH
Q 024575           79 INGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        79 ~a~~~~----------------~~~~~l~~~~~--~~---~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (265)
                      +|+...                .++.++++++.  ++   ++||++||..+|+.....+++|+.+..|.+.| .+|..+|
T Consensus       109 ~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  188 (375)
T 1t2a_A          109 LGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAY  188 (375)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHH
Confidence            998632                24567888876  55   79999999999998777788888888777777 9999999


Q ss_pred             HHHhh----cCCceeEeecceeeCCCCCCch----hHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          137 SVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       137 ~~~~~----~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      .+++.    .+++++++||+++|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.+++++.
T Consensus       189 ~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~  268 (375)
T 1t2a_A          189 WIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE  268 (375)
T ss_dssp             HHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC
Confidence            98753    5899999999999999754433    2334445555543 3345778899999999999999999998765


Q ss_pred             ccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          208 ASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       208 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                        ++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       269 --~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  297 (375)
T 1t2a_A          269 --PEDFVIATGEVHSVREFVEKSFLHIGKTI  297 (375)
T ss_dssp             --CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             --CceEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence              37999999999999999999999999875

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=7e-32  Score=218.07  Aligned_cols=208  Identities=21%  Similarity=0.240  Sum_probs=163.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++||+|++++|++..                 ..   +..|    +...+.+.  ++|.|||++
T Consensus         6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~---~~~~----~~~~~~l~--~~d~vihla   59 (298)
T 4b4o_A            6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GR---ITWD----ELAASGLP--SCDAAVNLA   59 (298)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TE---EEHH----HHHHHCCC--SCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Ce---eecc----hhhHhhcc--CCCEEEEec
Confidence            7999999999999999999999999998654                 11   1112    22334555  999999999


Q ss_pred             CCCc--------------------cchHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhH
Q 024575           81 GREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (265)
Q Consensus        81 ~~~~--------------------~~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (265)
                      +.+.                    .++.+++++++    +.++||++||.++||.....+.+|+.+..+.+++ ..+...
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~  139 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW  139 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence            7532                    13456666644    5567999999999999988899999888887766 445544


Q ss_pred             HHHH--hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceE
Q 024575          136 ESVL--ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (265)
Q Consensus       136 E~~~--~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (265)
                      |...  ...+++++++||+.+|||+  ......+......+.. ..++++++.++|||++|+++++..+++++.. +++|
T Consensus       140 e~~~~~~~~~~~~~~~r~~~v~g~~--~~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          140 EAAARLPGDSTRQVVVRSGVVLGRG--GGAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHCCSSSSSEEEEEEECEEECTT--SHHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHhhccCCceeeeeeeeEEcCC--CCchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            4433  4578999999999999996  3445555555555543 4458899999999999999999999998865 4599


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCc
Q 024575          214 NISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       214 ~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |+++++++|+.|+++.+++.+|++.
T Consensus       216 n~~~~~~~t~~e~~~~ia~~lgrp~  240 (298)
T 4b4o_A          216 NGVAPSSATNAEFAQTFGAALGRRA  240 (298)
T ss_dssp             EESCSCCCBHHHHHHHHHHHHTCCC
T ss_pred             EEECCCccCHHHHHHHHHHHhCcCC
Confidence            9999999999999999999999876

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.98  E-value=8.7e-32  Score=224.02  Aligned_cols=235  Identities=20%  Similarity=0.175  Sum_probs=179.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++++++|+++|++|++++|++.... ..+.... ........+++++.+|++|.+++.++++..++|+|||+
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (372)
T 1db3_A            7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIY-QDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (372)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHh-hccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865411 1111100 00000025788999999999999999985468999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CC---CcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~---~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+..                ..++.++++++.  ++   ++||++||..+|+.....+.+|+.+..|.+.| .+|..+|.
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (372)
T 1db3_A           86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (372)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence            9863                124667888876  55   79999999999987777788888888777777 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCCCch----hHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      +++    +.+++++++|++++|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  244 (372)
T 1db3_A          166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (372)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence            874    35899999999999999754332    3344555555653 3345778899999999999999999998765 


Q ss_pred             cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          209 SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       209 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                       +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  273 (372)
T 1db3_A          245 -PEDFVIATGVQYSVRQFVEMAAAQLGIKL  273 (372)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred             -CceEEEcCCCceeHHHHHHHHHHHhCCCc
Confidence             47999999999999999999999999765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.98  E-value=3.2e-31  Score=215.97  Aligned_cols=218  Identities=16%  Similarity=0.112  Sum_probs=173.6

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++  |++|++++|+....                .+++++.+|++|.+++.++++..++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            799999999999999998  89999999976541                256789999999999999988668999999


Q ss_pred             cCCCC---------------ccchHHHHHhCC--CCCcEEEEecceeeecC-CCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        79 ~a~~~---------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~-~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +|+..               ..++.+++++++  ++++||++||..+|+.. ...+..|+.+..|.+.| .+|..+|.++
T Consensus        69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A           69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence            99863               224678888876  78899999999999864 33456677777777777 9999999987


Q ss_pred             h----hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc--
Q 024575          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  208 (265)
Q Consensus       140 ~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--  208 (265)
                      +    +.+++++++||+++||+...     ..+....+.....+..+..++++++.++++|++|+|++++.+++++..  
T Consensus       149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~  228 (317)
T 3ajr_A          149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL  228 (317)
T ss_dssp             HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred             HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence            4    45899999999999997521     122222233333444445556777889999999999999999987643  


Q ss_pred             -cCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          209 -SRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       209 -~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                       .+++||+++ ..+|+.|+++.+.+.+|
T Consensus       229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          229 VLRNGYNVTA-YTFTPSELYSKIKERIP  255 (317)
T ss_dssp             SSCSCEECCS-EEECHHHHHHHHHTTCC
T ss_pred             ccCceEecCC-ccccHHHHHHHHHHHCC
Confidence             357999997 57999999999999988

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.98  E-value=2.4e-31  Score=222.03  Aligned_cols=234  Identities=17%  Similarity=0.149  Sum_probs=181.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhc-cceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||+++++.|++.|++|++++|+..... ..+.... ........ +++++.+|++|.+++.++++..++|+|||
T Consensus        34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  112 (381)
T 1n7h_A           34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIY-IDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN  112 (381)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhh-hccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999999876521 1111100 00000012 78899999999999999998445899999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCC-----cEEEEecceeeecCCCCCCCCCCCCCccccc-cchhh
Q 024575           79 INGREA----------------DEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (265)
Q Consensus        79 ~a~~~~----------------~~~~~l~~~~~--~~~-----~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (265)
                      +|+...                .++.++++++.  +++     +|||+||..+||.... +++|+.+..|.+.| .+|..
T Consensus       113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~  191 (381)
T 1n7h_A          113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA  191 (381)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred             CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence            998632                24677888876  444     9999999999997766 88888888887777 99999


Q ss_pred             HHHHHhh----cCCceeEeecceeeCCCCCCch----hHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          135 TESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       135 ~E~~~~~----~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      +|.+++.    .+++++++|++++|||+....+    +..++..+..+.. ...+++++..+++++++|+|++++.++++
T Consensus       192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            9998753    4899999999999999854433    2334444555543 22347778899999999999999999987


Q ss_pred             ccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          206 EKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +.  +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       272 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          272 EK--PDDYVVATEEGHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             SS--CCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             CC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCc
Confidence            65  47999999999999999999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.98  E-value=2.9e-31  Score=218.60  Aligned_cols=229  Identities=19%  Similarity=0.191  Sum_probs=182.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++|++|++++|++.....       ..+...  ..+++++.+|++|.+++.++++..++|+|||
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998765211       011111  1468899999999999999998546799999


Q ss_pred             cCCCC----------------ccchHHHHHhCC--CC-CcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      +|+..                ..++.++++++.  ++ ++||++||..+||.....+++|+.+..|.+.| .+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            99863                224677888876  65 89999999999998777788888887777777 999999998


Q ss_pred             Hhh----cCCceeEeecceeeCCCCCCchh----HHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          139 LES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       139 ~~~----~~~~~~i~r~~~i~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      ++.    .+++++++|+.++|||+......    ..++..+..+.. ...++++...+++++++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            743    48999999999999998543322    223444445543 2234677788999999999999999998765  


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  268 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFDI  268 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence            36999999999999999999999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=3.1e-32  Score=218.95  Aligned_cols=213  Identities=18%  Similarity=0.183  Sum_probs=170.7

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||+|++++++|+++  |++|++++|++.+.. .+        .  ..+++++.+|++|.+++.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l--------~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TL--------A--DQGVEVRHGDYNQPESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HH--------H--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HH--------h--hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999998  999999999865421 11        1  2578999999999999999999  9999999


Q ss_pred             cCCC------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEee
Q 024575           79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (265)
Q Consensus        79 ~a~~------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r  150 (265)
                      +++.      +..++.+++++++  ++++||++||.++|.             .+..|..+|..+|.++++.+++++++|
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~~K~~~E~~~~~~~~~~~ilr  139 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SIIPLAHVHLATEYAIRTTNIPYTFLR  139 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CCSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CCCchHHHHHHHHHHHHHcCCCeEEEE
Confidence            9986      3456788999887  789999999988752             122345999999999999999999999


Q ss_pred             cceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHH
Q 024575          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC  230 (265)
Q Consensus       151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i  230 (265)
                      |+.++|+... .++   ......+...  ...++..+++++++|+|++++.+++++...++.||+++++.+|+.|+++.+
T Consensus       140 p~~~~~~~~~-~~~---~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i  213 (287)
T 2jl1_A          140 NALYTDFFVN-EGL---RASTESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQIL  213 (287)
T ss_dssp             ECCBHHHHSS-GGG---HHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHH
T ss_pred             CCEeccccch-hhH---HHHhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHH
Confidence            9988876311 112   2222233332  234567889999999999999999886556789999999999999999999


Q ss_pred             HHHhCCCccccccceeeCC
Q 024575          231 AKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       231 ~~~~g~~~~~~~~~~~~~~  249 (265)
                      .+.+|.+.    ++...+.
T Consensus       214 ~~~~g~~~----~~~~~~~  228 (287)
T 2jl1_A          214 SEVSGKKV----VHQPVSF  228 (287)
T ss_dssp             HHHHSSCC----EEEECCH
T ss_pred             HHHHCCcc----eEEeCCH
Confidence            99999887    5555553

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=1.9e-31  Score=236.87  Aligned_cols=226  Identities=19%  Similarity=0.225  Sum_probs=184.3

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH-HHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|++. |++|++++|++........          ..+++++.+|++|.++ +.++++  ++|+|||
T Consensus       321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih  388 (660)
T 1z7e_A          321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP  388 (660)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence            799999999999999998 8999999998765322111          2578999999999765 777888  9999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCC-------Cccccc-cchh
Q 024575           79 INGREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (265)
Q Consensus        79 ~a~~~~----------------~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (265)
                      +|+...                .++.++++++. ..++|||+||.++|+.....+++|+.+.       .|.+.| .+|.
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHH
Confidence            998632                34677888876 3399999999999998766677777642       334445 9999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCC---------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|.+++    +.+++++++||+++|||+..         ..++..++..+..+..+.+++++++.++++|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~  548 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  548 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHH
Confidence            9999874    45899999999999999753         3456677777778887766677888999999999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC-ccCHHHHHHHHHHHhCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~  238 (265)
                      .+++++.  ..++.||+++++ .+|+.|+++.+.+.+|.+.
T Consensus       549 ~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~  589 (660)
T 1z7e_A          549 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  589 (660)
T ss_dssp             HHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred             HHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence            9998764  357899999986 8999999999999998754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1.3e-31  Score=208.05  Aligned_cols=201  Identities=20%  Similarity=0.189  Sum_probs=158.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++|++|++++|++.+. ..+           ..+++++.+|++|.+++.++++  ++|+|||++
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A           10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKI-KIE-----------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-CCC-----------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-hhc-----------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence            79999999999999999999999999997663 222           2688999999999999999999  999999999


Q ss_pred             CCC----------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH---h-hcC
Q 024575           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG  143 (265)
Q Consensus        81 ~~~----------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~---~-~~~  143 (265)
                      +..          ..++.+++++++  ++++||++||.++|+..... ..++.+..|.+.| .+|..+|.++   + +.+
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  154 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEFYLNFLMKEKE  154 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence            874          446788999987  78899999999877644332 2345566677777 9999999655   3 568


Q ss_pred             CceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCH
Q 024575          144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF  223 (265)
Q Consensus       144 ~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~  223 (265)
                      ++++++||+++|||+......       ..+....+.. ++. +++++++|+|++++.+++++...+++|+++++++.++
T Consensus       155 ~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          155 IDWVFFSPAADMRPGVRTGRY-------RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             SEEEEEECCSEEESCCCCCCC-------EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred             ccEEEEeCCcccCCCccccce-------eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence            999999999999997543221       1222222221 222 7999999999999999999988899999999999887


Q ss_pred             HH
Q 024575          224 DG  225 (265)
Q Consensus       224 ~e  225 (265)
                      ++
T Consensus       226 ~~  227 (227)
T 3dhn_A          226 HH  227 (227)
T ss_dssp             --
T ss_pred             CC
Confidence            63

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=1.3e-31  Score=215.19  Aligned_cols=212  Identities=19%  Similarity=0.207  Sum_probs=168.0

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||||++|+++++.|+++  |++|++++|++.+.. .+        .  ..+++++.+|++|.+++.++++  ++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--------~--~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-AL--------A--AQGITVRQADYGDEAALTSALQ--GVEKLLL   71 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-HH--------H--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-hh--------h--cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999998  999999999866521 11        1  2578899999999999999998  9999999


Q ss_pred             cCCC----CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeecc
Q 024575           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (265)
Q Consensus        79 ~a~~----~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~~  152 (265)
                      +++.    +..++.+++++++  ++++||++||..+|.             .+..|..+|..+|.++++.+++++++||+
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~~~~~~~~ilrp~  138 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLADSGIVYTLLRNG  138 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHHHcCCCeEEEeCh
Confidence            9985    3567889999987  889999999988751             12334599999999999899999999998


Q ss_pred             eeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHH
Q 024575          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK  232 (265)
Q Consensus       153 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  232 (265)
                      .++++.     .. ++........+. .+.++..+++++++|+|++++.+++++...++.|++++++.+|+.|+++.+.+
T Consensus       139 ~~~~~~-----~~-~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  211 (286)
T 2zcu_A          139 WYSENY-----LA-SAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTK  211 (286)
T ss_dssp             CBHHHH-----HT-THHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHH
T ss_pred             HHhhhh-----HH-HhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHH
Confidence            766542     11 122222223333 34567789999999999999999988655678999999999999999999999


Q ss_pred             HhCCCccccccceeeCC
Q 024575          233 VTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       233 ~~g~~~~~~~~~~~~~~  249 (265)
                      .+|.+.    ++...+.
T Consensus       212 ~~g~~~----~~~~~~~  224 (286)
T 2zcu_A          212 QSGKQV----TYQNLSE  224 (286)
T ss_dssp             HHSSCC----EEEECCH
T ss_pred             HHCCCC----ceeeCCH
Confidence            999887    5555554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.97  E-value=1.4e-30  Score=216.08  Aligned_cols=223  Identities=20%  Similarity=0.224  Sum_probs=174.4

Q ss_pred             CCccccchHHHHHHHHHcC-----CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccC-cc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~d   74 (265)
                      ||||||+|++++++|+++|     ++|++++|++....  ..          ..+++++.+|++|.+++.++++..+ +|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            7999999999999999999     99999999876632  11          2578999999999999999998332 99


Q ss_pred             EEEEcCCCC-----------ccchHHHHHhCC----CCCcEE-------EEecceeeecC--CCCCCCCCCCCCc-cccc
Q 024575           75 VVYDINGRE-----------ADEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH  129 (265)
Q Consensus        75 ~vi~~a~~~-----------~~~~~~l~~~~~----~~~~~v-------~~Ss~~~~~~~--~~~~~~e~~~~~~-~~~~  129 (265)
                      +|||+|+..           ..++.+++++++    ++++||       |+||.++||..  ...+++|+.+..| .+.|
T Consensus        75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            999999863           335778888876    378897       79999999874  3457778766554 3333


Q ss_pred             cchhhHHHHHh----hcC-CceeEeecceeeCCCCCC---chhHH-HHHHH--HcCCcccCCCCCC---ceeeeeeHHHH
Q 024575          130 KGKLNTESVLE----SKG-VNWTSLRPVYIYGPLNYN---PVEEW-FFHRL--KAGRPIPIPGSGI---QVTQLGHVKDL  195 (265)
Q Consensus       130 ~~k~~~E~~~~----~~~-~~~~i~r~~~i~g~~~~~---~~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~~D~  195 (265)
                         ..+|++++    +.+ ++++++||+++|||+...   .+... ++..+  ..+.++.++++++   ...++++++|+
T Consensus       155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv  231 (364)
T 2v6g_A          155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI  231 (364)
T ss_dssp             ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred             ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence               34666553    355 999999999999997542   22333 23333  3566666677763   45788999999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      |++++.+++++...+++||+++++.+|+.|+++.+++.+|.+.
T Consensus       232 a~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~  274 (364)
T 2v6g_A          232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVEC  274 (364)
T ss_dssp             HHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCB
T ss_pred             HHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCC
Confidence            9999999988765678999999999999999999999999876

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=8.6e-31  Score=215.97  Aligned_cols=233  Identities=16%  Similarity=0.178  Sum_probs=182.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|+++++.|++.|++|++++|++........     .+.. ...+++++.+|++|.+++.++++..++|+|||+
T Consensus        16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-----IFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-----HHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-----HHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            7999999999999999999999999998743211110     0111 136899999999999999999987789999999


Q ss_pred             CCC-CccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhcCCceeEeeccee
Q 024575           80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI  154 (265)
Q Consensus        80 a~~-~~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~~~i~r~~~i  154 (265)
                      ++. +...+.+++++++  + +++||+ |   +||.    +.+|..+..|...| .+|..+|.++++.+++++++||+++
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~  162 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSI  162 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccc
Confidence            997 6788999999987  6 899886 4   3432    23445555565555 9999999999999999999999999


Q ss_pred             eCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecC-CCccCHHHHHHHHHHH
Q 024575          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKV  233 (265)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~  233 (265)
                      +|..... +... .........+.++++++..+++++++|+|++++.++.++...++.|++++ ++.+|+.|+++.+++.
T Consensus       163 ~g~~~~~-~~~~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~  240 (346)
T 3i6i_A          163 ASWPYYN-NIHP-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK  240 (346)
T ss_dssp             SSCCCSC-C------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHH
T ss_pred             ccccCcc-cccc-ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHH
Confidence            9965321 1111 11112444566778888999999999999999999999876688999985 4889999999999999


Q ss_pred             hCCCccccccceeeCCCcc
Q 024575          234 TGLLDFRSLNLCTTTPKSL  252 (265)
Q Consensus       234 ~g~~~~~~~~~~~~~~~~~  252 (265)
                      +|.+.    ++.+++...+
T Consensus       241 ~g~~~----~~~~~~~~~~  255 (346)
T 3i6i_A          241 IGRTL----PRVTVTEDDL  255 (346)
T ss_dssp             HTSCC----CEEEECHHHH
T ss_pred             HCCCC----ceEecCHHHH
Confidence            99988    7777776543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=8.7e-31  Score=210.74  Aligned_cols=214  Identities=15%  Similarity=0.153  Sum_probs=168.6

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|+++++.|.+. |++|++++|++.+... +.          ..+++++.+|++|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-~~----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-DW----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-GG----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-hh----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence            799999999999999998 9999999999776322 21          3689999999999999999999  99999999


Q ss_pred             CCCC------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeec
Q 024575           80 NGRE------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (265)
Q Consensus        80 a~~~------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~  151 (265)
                      ++..      ...+.+++++++  ++++||++||.+.   .         ...|......+..+|..+++.+++++++||
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~---------~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp  140 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---Q---------HNNPFHMSPYFGYASRLLSTSGIDYTYVRM  140 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---S---------TTCCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---C---------CCCCCccchhHHHHHHHHHHcCCCEEEEec
Confidence            9864      345778899987  7899999999542   1         111111223345778888889999999999


Q ss_pred             ceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHH
Q 024575          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (265)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~  231 (265)
                      ++++|+.     .. ++.......... .+.++..+++++++|+|++++.++.++...++.|+++ ++.+|+.|+++.++
T Consensus       141 ~~~~~~~-----~~-~~~~~~~~~~~~-~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~  212 (289)
T 3e48_A          141 AMYMDPL-----KP-YLPELMNMHKLI-YPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILS  212 (289)
T ss_dssp             CEESTTH-----HH-HHHHHHHHTEEC-CCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHH
T ss_pred             ccccccc-----HH-HHHHHHHCCCEe-cCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHH
Confidence            9999972     22 233333333222 3557788999999999999999999887668899999 99999999999999


Q ss_pred             HHhCCCccccccceeeCCCc
Q 024575          232 KVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +.+|++.    ++..++..+
T Consensus       213 ~~~g~~~----~~~~~~~~~  228 (289)
T 3e48_A          213 EASGTEI----KYEPVSLET  228 (289)
T ss_dssp             HHHTSCC----EECCCCHHH
T ss_pred             HHHCCce----eEEeCCHHH
Confidence            9999987    655555443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=1.3e-30  Score=223.33  Aligned_cols=235  Identities=14%  Similarity=0.116  Sum_probs=176.0

Q ss_pred             CCccccchHHHHHHHHHc---CCeEEEEEcCCCcccc------CCCCCC----hhHHhhhhccceEEEecCC------Ch
Q 024575            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIAQ------QLPGES----DQEFAEFSSKILHLKGDRK------DY   61 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g~~V~~l~r~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~D~~------~~   61 (265)
                      ||||||||++++++|++.   |++|++++|+......      .+....    .........+++++.+|++      +.
T Consensus        79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~  158 (478)
T 4dqv_A           79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ  158 (478)
T ss_dssp             ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred             ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence            799999999999999999   8999999998764210      000000    0000111258999999998      66


Q ss_pred             HHHHHHhhccCccEEEEcCCC------------CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           62 DFVKSSLSAKGFDVVYDINGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~------------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +.+.++++  ++|+|||+|+.            |..++.++++++.  ++++|||+||.++|+.....+++|+.+..|.+
T Consensus       159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~  236 (478)
T 4dqv_A          159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS  236 (478)
T ss_dssp             HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred             HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence            78899998  99999999986            2346788999977  77899999999999887777777876654332


Q ss_pred             c-----------c-cchhhHHHHHhh----cCCceeEeecceeeCCCC------CCchhHHHHHHHHcCCccc--CCC--
Q 024575          128 R-----------H-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN------YNPVEEWFFHRLKAGRPIP--IPG--  181 (265)
Q Consensus       128 ~-----------~-~~k~~~E~~~~~----~~~~~~i~r~~~i~g~~~------~~~~~~~~~~~~~~~~~~~--~~~--  181 (265)
                      .           | .+|..+|.++++    .+++++++||++|||++.      ...++..++.........+  +..  
T Consensus       237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~  316 (478)
T 4dqv_A          237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD  316 (478)
T ss_dssp             CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence            2           5 999999999854    589999999999999853      1234444544443322222  111  


Q ss_pred             -C---CCceeeeeeHHHHHHHHHHHhcC----ccccCceEEecCCCc--cCHHHHHHHHHHHhCCCc
Q 024575          182 -S---GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKVTGLLD  238 (265)
Q Consensus       182 -~---~~~~~~~i~~~D~a~~~~~~~~~----~~~~~~~~~i~~~~~--~s~~el~~~i~~~~g~~~  238 (265)
                       +   ++..++++|++|+|++++.++.+    +...+++||+++++.  +++.|+++.+.+. |.+.
T Consensus       317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~  382 (478)
T 4dqv_A          317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPI  382 (478)
T ss_dssp             TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSC
T ss_pred             cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCc
Confidence             1   25778999999999999999875    445678999999988  9999999999995 7665

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.97  E-value=3.4e-30  Score=212.12  Aligned_cols=225  Identities=16%  Similarity=0.118  Sum_probs=181.6

Q ss_pred             CCccccchHHHHHHHHHcC-------CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (265)
                      ||||||||++++++|+++|       ++|++++|++..... ..          ..+++++.+|++|.+.+.++++ .++
T Consensus        20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~-~~~   87 (342)
T 2hrz_A           20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GF----------SGAVDARAADLSAPGEAEKLVE-ARP   87 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TC----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred             ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-cc----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence            7999999999999999999       899999998754221 11          2578899999999999998884 289


Q ss_pred             cEEEEcCCCC---------------ccchHHHHHhCC--C-----CCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           74 DVVYDINGRE---------------ADEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        74 d~vi~~a~~~---------------~~~~~~l~~~~~--~-----~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      |+|||+|+..               ..++.++++++.  +     +++||++||..+|+.....+.+|+.+..|.+.| .
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~  167 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT  167 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence            9999999864               234677888876  4     789999999999987656688898888887777 9


Q ss_pred             chhhHHHHHhh----cCCceeEeecceeeC-CCCC----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       131 ~k~~~E~~~~~----~~~~~~i~r~~~i~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      +|..+|.++++    .+++++++|++.+|| |+..    ..++..++.....+....++..+....++++++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence            99999998753    368999999999998 6642    23455666677777765555555677889999999999999


Q ss_pred             HhcCccc---cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          202 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       202 ~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++.+..   .+++||+++ +.+|+.|+++.+.+.+|.+.
T Consensus       248 ~~~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          248 GAMIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             HHHSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHHH
T ss_pred             HHhccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCccc
Confidence            9987643   467999964 77999999999999999764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=5.5e-30  Score=229.18  Aligned_cols=233  Identities=20%  Similarity=0.242  Sum_probs=179.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||+||++++++|+++|++|++++|+........     ..+.. ...+++++.+|++|.+++.++++..++|+|||+
T Consensus        17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999765421100     01111 125788999999999999999886679999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCC----CCCCCCCCCCCccccc-cchhhHH
Q 024575           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        80 a~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~----~~~~~e~~~~~~~~~~-~~k~~~E  136 (265)
                      |+...                .++.+++++|+  ++++||++||.++|+...    ..+.+|+.+..|.+.| .+|..+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  171 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  171 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence            98642                34667888876  789999999999998532    3467777777777766 9999999


Q ss_pred             HHHhh------cCCceeEeecceeeCCCCC-----------CchhHHHHHHHHc-CCcccCCC------CCCceeeeeeH
Q 024575          137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHV  192 (265)
Q Consensus       137 ~~~~~------~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~  192 (265)
                      .+++.      .+++++++||+++|||+..           ..++..+...... +..+.+++      ++++.++++|+
T Consensus       172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  251 (699)
T 1z45_A          172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  251 (699)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence            98753      5899999999999998521           2344444433332 24555555      57788999999


Q ss_pred             HHHHHHHHHHhcCc------cccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          193 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       193 ~D~a~~~~~~~~~~------~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +|+|++++.+++.+      ...+++||+++++.+|+.|+++.+++.+|.+.
T Consensus       252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  303 (699)
T 1z45_A          252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL  303 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCC
Confidence            99999999988642      22357999999999999999999999999876

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=1e-30  Score=215.09  Aligned_cols=228  Identities=14%  Similarity=0.085  Sum_probs=172.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEE-EecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++|++|++++|+..... .+.    ..+.. ...+++++ .+|++|.+.+.++++  ++|+|||
T Consensus        17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   89 (342)
T 1y1p_A           17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQ----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH   89 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHH----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999999765411 000    00000 01468888 899999999999998  9999999


Q ss_pred             cCCCC-------------ccchHHHHHhCC---CCCcEEEEecceeeecCC----CCCCCCCC----------------C
Q 024575           79 INGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD----------------T  122 (265)
Q Consensus        79 ~a~~~-------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~----~~~~~e~~----------------~  122 (265)
                      +|+..             ..++.++++++.   ++++||++||..+|+...    +.+++|++                +
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            99863             234678888864   578999999999986432    14566665                1


Q ss_pred             CCccccc-cchhhHHHHHhhc------CCceeEeecceeeCCCCCC----chhHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          123 VDPKSRH-KGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~~~------~~~~~i~r~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                      ..|.+.| .+|..+|.+++..      +++++++||+++|||....    .....++..+..++...+++++ +.+++++
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence            2344556 9999999987432      7889999999999997532    2566777777777765544444 6789999


Q ss_pred             HHHHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      ++|+|++++.+++++...++.+ ++.+..+|+.|+++.+.+.+|.+
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence            9999999999998765445445 45567899999999999999974

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=7.7e-31  Score=222.10  Aligned_cols=228  Identities=17%  Similarity=0.190  Sum_probs=174.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc--cCCCCCChh-----HHhhhhccceEEEecCCChHHHHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (265)
                      |||||+||++++++|++.|++|++++|++....  ..+.+....     .......++.++.+|++|.+.+. .+.  ++
T Consensus        75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  151 (427)
T 4f6c_A           75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  151 (427)
T ss_dssp             ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred             ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence            799999999999999989999999999987311  000000000     01111368999999999988777 454  99


Q ss_pred             cEEEEcCCCC-------------ccchHHHHHhCC-CCCcEEEEecceeeec-----CCCCCCCCCCC---CCccccc-c
Q 024575           74 DVVYDINGRE-------------ADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (265)
Q Consensus        74 d~vi~~a~~~-------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (265)
                      |+|||+|+..             +.++.++++++. ++++|||+||..+ |.     ....+++|+++   ..+.+.| .
T Consensus       152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  230 (427)
T 4f6c_A          152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  230 (427)
T ss_dssp             SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred             CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence            9999999863             335778888877 8899999999998 53     23456777766   3455566 9


Q ss_pred             chhhHHHHHhh---cCCceeEeecceeeCCCCCC--------chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       131 ~k~~~E~~~~~---~~~~~~i~r~~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      +|..+|.++++   .+++++++||+++|||....        .++..++........++. +.++..+++++++|+|+++
T Consensus       231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai  309 (427)
T 4f6c_A          231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  309 (427)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHH
Confidence            99999999865   79999999999999997543        235566777777766554 3457889999999999999


Q ss_pred             HHHhcCccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      +.++..+. .+++||+++++++++.|+++.+.+ +|
T Consensus       310 ~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          310 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             HHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             HHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            99998877 688999999999999999999998 66

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=1.9e-30  Score=224.15  Aligned_cols=228  Identities=17%  Similarity=0.186  Sum_probs=175.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcccc--CCCCCChh-----HHhhhhccceEEEecCCChHHHHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (265)
                      ||||||+|++++++|.+.|++|++++|++.....  .+......     .......+++++.+|+++++.+. ...  ++
T Consensus       156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  232 (508)
T 4f6l_B          156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  232 (508)
T ss_dssp             SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred             ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence            8999999999999998889999999999873110  00000000     00112368999999999987777 444  99


Q ss_pred             cEEEEcCCC-------------CccchHHHHHhCC-CCCcEEEEecceeeec-----CCCCCCCCCCC---CCccccc-c
Q 024575           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (265)
Q Consensus        74 d~vi~~a~~-------------~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (265)
                      |+|||+|+.             |+.++.++++++. ++++|||+||.++ |.     ....+++|+++   ..+.+.| .
T Consensus       233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  311 (508)
T 4f6l_B          233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  311 (508)
T ss_dssp             SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHH
T ss_pred             CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHH
Confidence            999999986             3445788999877 7899999999999 42     23456777765   2345556 9


Q ss_pred             chhhHHHHHhh---cCCceeEeecceeeCCCCCCc--------hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       131 ~k~~~E~~~~~---~~~~~~i~r~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      +|+.+|.++++   .+++++++||+++||++....        .+..++........++. +.++..++|++++|+|+++
T Consensus       312 sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai  390 (508)
T 4f6l_B          312 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  390 (508)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHH
Confidence            99999999854   799999999999999975332        35566777766666554 4467889999999999999


Q ss_pred             HHHhcCccccCceEEecCCCccCHHHHHHHHHHHh
Q 024575          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVT  234 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~  234 (265)
                      +.++.++. .+++||+++++.+++.|+++.+.+..
T Consensus       391 ~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          391 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             HHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            99998876 67899999999999999999999754

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=2.1e-30  Score=200.26  Aligned_cols=191  Identities=15%  Similarity=0.172  Sum_probs=157.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|++++++|+++|++|++++|++.+.. .            ..+++++.+|++| .+++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~   70 (219)
T 3dqp_A            6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP-Q------------YNNVKAVHFDVDWTPEEMAKQLH--GMDAIINV   70 (219)
T ss_dssp             ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC-C------------CTTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCccchh-h------------cCCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence            799999999999999999999999999976521 1            1578999999999 999999999  99999999


Q ss_pred             CCCC--------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH-hhcCCcee
Q 024575           80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-ESKGVNWT  147 (265)
Q Consensus        80 a~~~--------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~-~~~~~~~~  147 (265)
                      ++..        ..++.+++++++  ++++||++||.++++..   +..| .+..|.+.| .+|..+|.++ +..+++++
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~  146 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT  146 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence            9863        445888999987  77899999998876532   2333 333445555 9999999999 78899999


Q ss_pred             EeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHHHH
Q 024575          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (265)
Q Consensus       148 i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~  227 (265)
                      ++||+++||+.....+.              .   ++..+++++++|+|++++.+++++...++.|+++++. .++.|+.
T Consensus       147 ilrp~~v~g~~~~~~~~--------------~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~  208 (219)
T 3dqp_A          147 IIQPGALTEEEATGLID--------------I---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEAL  208 (219)
T ss_dssp             EEEECSEECSCCCSEEE--------------E---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHH
T ss_pred             EEeCceEecCCCCCccc--------------c---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHH
Confidence            99999999985432221              1   2467899999999999999999987778999998875 9999887


Q ss_pred             H
Q 024575          228 R  228 (265)
Q Consensus       228 ~  228 (265)
                      +
T Consensus       209 ~  209 (219)
T 3dqp_A          209 E  209 (219)
T ss_dssp             H
T ss_pred             H
Confidence            6

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=1.4e-29  Score=205.96  Aligned_cols=233  Identities=13%  Similarity=0.141  Sum_probs=171.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|+++++.|+++|++|++++|++.......    ...+... ..+++++.+|++|++++.++++  ++|+|||+
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   83 (313)
T 1qyd_A           10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA   83 (313)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH----HHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEEC
Confidence            799999999999999999999999999865410000    0001111 3579999999999999999999  99999999


Q ss_pred             CCC-----CccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHhhcCCceeEee
Q 024575           80 NGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLR  150 (265)
Q Consensus        80 a~~-----~~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~i~r  150 (265)
                      ++.     +...+.+++++++  + +++||+ |   +||.....+   ..+..| .+.|.+|..+|.++++.+++++++|
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilr  156 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYVS  156 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEE
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEEE
Confidence            986     4567899999987  6 899985 3   444322111   122233 3345899999999999999999999


Q ss_pred             cceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCC-CccCHHHHHHH
Q 024575          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARA  229 (265)
Q Consensus       151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~el~~~  229 (265)
                      |+.++++.... +..........++.+..+++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.
T Consensus       157 p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~  235 (313)
T 1qyd_A          157 SNMFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI  235 (313)
T ss_dssp             CCEEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHH
T ss_pred             eceeccccccc-cccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHH
Confidence            99988742110 00000000123344556677888999999999999999999987666778888865 78999999999


Q ss_pred             HHHHhCCCccccccceeeCCCc
Q 024575          230 CAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +++.+|++.    ++.+++...
T Consensus       236 ~~~~~g~~~----~~~~~~~~~  253 (313)
T 1qyd_A          236 WERLSEQNL----DKIYISSQD  253 (313)
T ss_dssp             HHHHHTCCC----EECCBCSHH
T ss_pred             HHHhcCCCC----ceEECCHHH
Confidence            999999987    666666543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=6.1e-29  Score=198.30  Aligned_cols=206  Identities=19%  Similarity=0.165  Sum_probs=168.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|++ |++|++++|++...                .+   +.+|++|++++.++++..++|+|||+|
T Consensus         6 tGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            6 TGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             ETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999995 89999999986420                12   789999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~~----------------~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +...                .++.++++++. ...+||++||..+|+.... +++|+.+..|.+.| .+|..+|.+++. 
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence            8642                24677888876 3249999999999976544 77888887777767 999999999877 


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                       ++++++||+.+||+   ..+...++.....+..+...++   .+++++++|+|++++.+++++.  ++.||+++ +.+|
T Consensus       144 -~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s  213 (273)
T 2ggs_A          144 -DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERIS  213 (273)
T ss_dssp             -TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEE
T ss_pred             -CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Cccc
Confidence             89999999999983   3455556666666666555443   7899999999999999998754  45999999 9999


Q ss_pred             HHHHHHHHHHHhCCCc
Q 024575          223 FDGLARACAKVTGLLD  238 (265)
Q Consensus       223 ~~el~~~i~~~~g~~~  238 (265)
                      +.|+++.+.+.+|.+.
T Consensus       214 ~~e~~~~~~~~~g~~~  229 (273)
T 2ggs_A          214 RFELALKIKEKFNLPG  229 (273)
T ss_dssp             HHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHhCCCh
Confidence            9999999999999886

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=3.8e-29  Score=207.90  Aligned_cols=191  Identities=17%  Similarity=0.169  Sum_probs=163.2

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||+|++++++|+++|+ +|++++|+                              .|.+++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~   53 (369)
T 3st7_A            6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL   53 (369)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence            79999999999999999998 77776553                              57788899998  89999999


Q ss_pred             CCC------------CccchHHHHHhCC--CCC-cEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhh---
Q 024575           80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLES---  141 (265)
Q Consensus        80 a~~------------~~~~~~~l~~~~~--~~~-~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~---  141 (265)
                      |+.            |..++.+++++++  +++ +|||+||..+|+              ...|..+|..+|.++++   
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK~~~E~~~~~~~~  119 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESKLQGEQLLREYAE  119 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHHHHHHHHHHHHHH
Confidence            985            3456889999987  565 899999999874              23344999999999864   


Q ss_pred             -cCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc-CceEEec
Q 024575          142 -KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNIS  216 (265)
Q Consensus       142 -~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~-~~~~~i~  216 (265)
                       .+++++++||+++|||+..   .+++..++..+..+..+.+ .+++..+++++++|+|++++.+++++... ++.||++
T Consensus       120 ~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~  198 (369)
T 3st7_A          120 EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP  198 (369)
T ss_dssp             HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCS
T ss_pred             HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeC
Confidence             7899999999999999753   3577788888888887665 47788999999999999999999887654 7899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCc
Q 024575          217 GEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       217 ~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++.+|+.|+++.+++.+|.+.
T Consensus       199 ~~~~~s~~e~~~~~~~~~g~~~  220 (369)
T 3st7_A          199 NVFKVTLGEIVDLLYKFKQSRL  220 (369)
T ss_dssp             CCEEEEHHHHHHHHHHHHHHHH
T ss_pred             CCCceeHHHHHHHHHHHhCCCc
Confidence            9999999999999999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=4.5e-29  Score=203.41  Aligned_cols=225  Identities=18%  Similarity=0.214  Sum_probs=172.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|+++++.|+++|++|++++|++......+     ..+  ...+++++.+|++|.+++.++++  ++|+|||++
T Consensus        17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~l--~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-----DEF--QSLGAIIVKGELDEHEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-----HHH--HHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-----HHh--hcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            699999999999999999999999999875211100     000  13579999999999999999999  999999999


Q ss_pred             CCC-ccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHhhcCCceeEeecceee
Q 024575           81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (265)
Q Consensus        81 ~~~-~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~i~r~~~i~  155 (265)
                      +.. ...+.+++++++  + +++||+ |   +||...    ++..+..| ...|.+|..+|.++++.+++++++||+.++
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~  159 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA  159 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence            864 567889999987  6 899985 3   344221    22223233 234589999999999999999999999876


Q ss_pred             CCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecC-CCccCHHHHHHHHHHHh
Q 024575          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKVT  234 (265)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~  234 (265)
                      +.     +...+......++.+.++++++..+++++++|+|++++.++.++...++.|++++ ++.+|+.|+++.+++.+
T Consensus       160 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  234 (318)
T 2r6j_A          160 SY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI  234 (318)
T ss_dssp             HH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred             hh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHh
Confidence            54     2222222222344555667788899999999999999999988766677888875 47899999999999999


Q ss_pred             CCCccccccceeeCCCc
Q 024575          235 GLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       235 g~~~~~~~~~~~~~~~~  251 (265)
                      |.+.    ++..++...
T Consensus       235 g~~~----~~~~~~~~~  247 (318)
T 2r6j_A          235 GKKF----KKIHVPEEE  247 (318)
T ss_dssp             TCCC----EEEEECHHH
T ss_pred             CCCC----ceeecCHHH
Confidence            9988    677666543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=1.1e-29  Score=219.60  Aligned_cols=210  Identities=14%  Similarity=0.084  Sum_probs=160.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|++.|++.|++|++++|++.+.                   ..+.+|+.+.  +.+++.  ++|+|||+|
T Consensus       153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------------~~v~~d~~~~--~~~~l~--~~D~Vih~A  209 (516)
T 3oh8_A          153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------------GKRFWDPLNP--ASDLLD--GADVLVHLA  209 (516)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------------TCEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------------cceeecccch--hHHhcC--CCCEEEECC
Confidence            79999999999999999999999999987652                   1256677643  345666  999999999


Q ss_pred             CCC-----------------ccchHHHHHh-CC--CCCcEEEEecceeee-cCCCCCCCCCCCCCccccc-cchhhHHHH
Q 024575           81 GRE-----------------ADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        81 ~~~-----------------~~~~~~l~~~-~~--~~~~~v~~Ss~~~~~-~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (265)
                      +..                 ..++.+++++ ++  ++++|||+||.++|| .....+++|+.+. +.++| .+|...|.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~  288 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA  288 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence            863                 2347788888 44  788999999999998 5555567777766 55555 677777765


Q ss_pred             H---hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEe
Q 024575          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  215 (265)
Q Consensus       139 ~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i  215 (265)
                      +   +..+++++++||+++|||+  ..++..+...+..+.. ..++++++.++++|++|+|++++.+++++.. ++.||+
T Consensus       289 ~~~~~~~gi~~~ilRp~~v~Gp~--~~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni  364 (516)
T 3oh8_A          289 TAPASDAGKRVAFIRTGVALSGR--GGMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINA  364 (516)
T ss_dssp             THHHHHTTCEEEEEEECEEEBTT--BSHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEE
T ss_pred             HHHHHhCCCCEEEEEeeEEECCC--CChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEE
Confidence            4   4679999999999999996  3455555555544443 3457888999999999999999999988764 459999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCc
Q 024575          216 SGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       216 ~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++++.+|+.|+++.+++.+|.+.
T Consensus       365 ~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          365 VAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             SCSCCEEHHHHHHHTTC------
T ss_pred             ECCCCCCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999765

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=2.7e-30  Score=208.90  Aligned_cols=221  Identities=20%  Similarity=0.207  Sum_probs=169.8

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|++++++|+++| ++|++++|++.+...       ..+.  ..+++++.+|++|++++.++++  ++|+|||+
T Consensus        11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   79 (299)
T 2wm3_A           11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELR--LQGAEVVQGDQDDQVIMELALN--GAYATFIV   79 (299)
T ss_dssp             ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHH--HCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence            7999999999999999998 999999998765210       0011  2578999999999999999999  99999999


Q ss_pred             CCCC--------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEe
Q 024575           80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (265)
Q Consensus        80 a~~~--------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~  149 (265)
                      ++..        ...+.+++++++  ++++||++|+..+|+....      .  .+..|+.+|..+|.++++.+++++++
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~------~--~~~~y~~sK~~~e~~~~~~gi~~~il  151 (299)
T 2wm3_A           80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG------R--LAAAHFDGKGEVEEYFRDIGVPMTSV  151 (299)
T ss_dssp             CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT------S--CCCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC------c--ccCchhhHHHHHHHHHHHCCCCEEEE
Confidence            9752        235678888877  8899999998887753221      1  12345599999999999999999999


Q ss_pred             ecceeeCCCCCCchhHHHHHH-HHcCC--cccCCCCCCceeeeeeHHHHHHHHHHHhcCcc-ccCceEEecCCCccCHHH
Q 024575          150 RPVYIYGPLNYNPVEEWFFHR-LKAGR--PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       150 r~~~i~g~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~~~~s~~e  225 (265)
                      ||+++||+...     .+... ...++  .+.. ..++..+++++++|+|++++.++.++. ..++.|++++ +.+|+.|
T Consensus       152 rp~~~~~~~~~-----~~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e  224 (299)
T 2wm3_A          152 RLPCYFENLLS-----HFLPQKAPDGKSYLLSL-PTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEE  224 (299)
T ss_dssp             ECCEEGGGGGT-----TTCCEECTTSSSEEECC-CCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHH
T ss_pred             eecHHhhhchh-----hcCCcccCCCCEEEEEe-cCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHH
Confidence            99999997421     11111 11222  1222 236678999999999999999998753 3578999987 6799999


Q ss_pred             HHHHHHHHhCCCccccccceeeCCCc
Q 024575          226 LARACAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       226 l~~~i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +++.+.+.+|++.    ++..++...
T Consensus       225 ~~~~~~~~~g~~~----~~~~~~~~~  246 (299)
T 2wm3_A          225 YAALLTKHTRKVV----HDAKMTPED  246 (299)
T ss_dssp             HHHHHHHHHSSCE----EECCCCTHH
T ss_pred             HHHHHHHHHCCCc----eeEecCHHH
Confidence            9999999999987    555555543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=4.1e-29  Score=205.97  Aligned_cols=226  Identities=13%  Similarity=0.125  Sum_probs=170.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEec-CCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|+++++.|+++|++|++++|++++...       ..+.. ..+++++.+| ++|.+++.++++  ++|+|||+
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~l~~-~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~   80 (352)
T 1xgk_A           11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-------EELQA-IPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN   80 (352)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-------HHHHT-STTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-------HHHhh-cCCcEEEECCccCCHHHHHHHHh--cCCEEEEc
Confidence            7999999999999999999999999998765210       00110 1478899999 999999999998  99999999


Q ss_pred             CCCC----ccchHHHHHhCC--C-CCcEEEEecce--eeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEee
Q 024575           80 NGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (265)
Q Consensus        80 a~~~----~~~~~~l~~~~~--~-~~~~v~~Ss~~--~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r  150 (265)
                      ++..    ....++++++++  + +++|||+||..  .|+           ...+..|+.+|..+|.++++.+++++++|
T Consensus        81 a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~-----------~~~~~~y~~sK~~~E~~~~~~gi~~~ivr  149 (352)
T 1xgk_A           81 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG-----------PWPAVPMWAPKFTVENYVRQLGLPSTFVY  149 (352)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS-----------SCCCCTTTHHHHHHHHHHHTSSSCEEEEE
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccC-----------CCCCccHHHHHHHHHHHHHHcCCCEEEEe
Confidence            8754    123478888877  6 89999999975  221           12234456999999999999999999999


Q ss_pred             cceeeCCCCCCchhHHHHHH-HHcCCc-ccCCCCCCceeeeeeH-HHHHHHHHHHhcCcc--ccCceEEecCCCccCHHH
Q 024575          151 PVYIYGPLNYNPVEEWFFHR-LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       151 ~~~i~g~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~e  225 (265)
                      |+ +||++....+...+... ...+.. +..++++++.++++++ +|+|++++.+++++.  ..++.|++++ +.+|+.|
T Consensus       150 pg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e  227 (352)
T 1xgk_A          150 AG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQ  227 (352)
T ss_dssp             EC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHH
T ss_pred             cc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHH
Confidence            86 68876432211110001 112222 2335667788999999 899999999998752  2578999996 6799999


Q ss_pred             HHHHHHHHhCCCccccccceeeCCCccc
Q 024575          226 LARACAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       226 l~~~i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      +++.+.+.+|.+.    ++..+|...+.
T Consensus       228 ~~~~i~~~~G~~~----~~~~vp~~~~~  251 (352)
T 1xgk_A          228 VCAAFSRALNRRV----TYVQVPKVEIK  251 (352)
T ss_dssp             HHHHHHHHHTSCE----EEEECSSCCCC
T ss_pred             HHHHHHHHHCCCC----ceEECCHHHHH
Confidence            9999999999987    77777755443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.96  E-value=9.5e-29  Score=201.72  Aligned_cols=228  Identities=17%  Similarity=0.200  Sum_probs=170.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCC-CccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||||++|+++++.|+++|++|++++|++ .......    ...+.. ...+++++.+|++|.+++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~   83 (321)
T 3c1o_A           10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS----VQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS   83 (321)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH----HHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            79999999999999999999999999986 2200000    000111 13579999999999999999999  9999999


Q ss_pred             cCCCC-ccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHhhcCCceeEeecce
Q 024575           79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVY  153 (265)
Q Consensus        79 ~a~~~-~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~i~r~~~  153 (265)
                      +++.. ...+.+++++++  + +++||+ |   +||..    .++..+..| .+.|.+|..+|.++++.+++++++||+.
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~  155 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANC  155 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEece
Confidence            99864 567889999987  6 899983 3   34321    112222233 2334899999999999999999999998


Q ss_pred             eeCCCCCCchhHHHHHH---HHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecC-CCccCHHHHHHH
Q 024575          154 IYGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARA  229 (265)
Q Consensus       154 i~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~  229 (265)
                      ++++.     ...+...   ...++.+..+++++..+++++++|+|++++.++.++...++.|++++ ++.+|+.|+++.
T Consensus       156 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~  230 (321)
T 3c1o_A          156 FGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISL  230 (321)
T ss_dssp             EHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHH
T ss_pred             ecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHH
Confidence            87751     2222211   12333455567778899999999999999999988766678888876 478999999999


Q ss_pred             HHHHhCCCccccccceeeCCCc
Q 024575          230 CAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +++.+|.+.    ++..++...
T Consensus       231 ~~~~~g~~~----~~~~~~~~~  248 (321)
T 3c1o_A          231 WEAKSGLSF----KKVHMPDEQ  248 (321)
T ss_dssp             HHHHHTSCC----CEEEECHHH
T ss_pred             HHHHcCCcc----eeeeCCHHH
Confidence            999999988    777666443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.96  E-value=8.7e-29  Score=200.80  Aligned_cols=230  Identities=16%  Similarity=0.215  Sum_probs=171.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcc--ccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      |||||++|+++++.|+++|++|++++|+....  ....     ..+... ..+++++.+|++|.+++.++++  ++|+||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi   82 (308)
T 1qyc_A           10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA-----QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI   82 (308)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH-----HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHH-----HHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence            79999999999999999999999999986542  0000     001111 3589999999999999999999  999999


Q ss_pred             EcCCCC-ccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHhhcCCceeEeecc
Q 024575           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPV  152 (265)
Q Consensus        78 ~~a~~~-~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~i~r~~  152 (265)
                      |+++.. .....+++++++  + +++||+ |+   ||..    ..+..+..| ...|.+|..+|.++++.+++++++||+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~  154 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN  154 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999864 467889999987  6 899984 43   4321    122233334 234589999999999999999999999


Q ss_pred             eeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCC-CccCHHHHHHHHH
Q 024575          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA  231 (265)
Q Consensus       153 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~el~~~i~  231 (265)
                      .++++.... +... ......++.+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.+.
T Consensus       155 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~  232 (308)
T 1qyc_A          155 CFAGYFLRS-LAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE  232 (308)
T ss_dssp             EEHHHHTTT-TTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeccccccc-cccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHH
Confidence            988753110 0000 000113334555677888999999999999999999887666778888764 7899999999999


Q ss_pred             HHhCCCccccccceeeCCCc
Q 024575          232 KVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +.+|++.    ++.+++...
T Consensus       233 ~~~g~~~----~~~~~~~~~  248 (308)
T 1qyc_A          233 KKIDKTL----EKAYVPEEE  248 (308)
T ss_dssp             HHTTSCC----EEEEECHHH
T ss_pred             HHhCCCC----ceEeCCHHH
Confidence            9999988    777766443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=2.4e-28  Score=198.13  Aligned_cols=230  Identities=18%  Similarity=0.201  Sum_probs=170.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|+++++.|+++|++|++++|++....... . ....+.. ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~   83 (307)
T 2gas_A            8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPE-T-KEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVICA   83 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHH-H-HHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChH-H-HHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEEC
Confidence            799999999999999999999999999862100000 0 0000111 13579999999999999999999  99999999


Q ss_pred             CCCC-ccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHhhcCCceeEeeccee
Q 024575           80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI  154 (265)
Q Consensus        80 a~~~-~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~i~r~~~i  154 (265)
                      ++.. .....+++++++  + +++||+ |   +||...    ++..+..| .+.|.+|..+|.++++.+++++++||+.+
T Consensus        84 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~  155 (307)
T 2gas_A           84 AGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAF  155 (307)
T ss_dssp             SSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred             CcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEccee
Confidence            9864 567889999987  6 899984 3   344221    12223333 23458999999999999999999999998


Q ss_pred             eCCCCCCchhHHHHHH---HHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCC-CccCHHHHHHHH
Q 024575          155 YGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARAC  230 (265)
Q Consensus       155 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~el~~~i  230 (265)
                      +++..     ..+...   ....+.+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+
T Consensus       156 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~  230 (307)
T 2gas_A          156 TGYFL-----RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALW  230 (307)
T ss_dssp             TTTTG-----GGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHH
T ss_pred             ecccc-----ccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHH
Confidence            87631     111110   112334455677788899999999999999999887666778888764 689999999999


Q ss_pred             HHHhCCCccccccceeeCCCc
Q 024575          231 AKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       231 ~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      ++.+|++.    ++..++...
T Consensus       231 ~~~~g~~~----~~~~~~~~~  247 (307)
T 2gas_A          231 EKKIGKTL----EKTYVSEEQ  247 (307)
T ss_dssp             HHHHTSCC----EEEEECHHH
T ss_pred             HHHhCCCC----ceeecCHHH
Confidence            99999988    777776543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=6.8e-29  Score=191.91  Aligned_cols=200  Identities=18%  Similarity=0.239  Sum_probs=132.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++|++|++++|++.+...            ...+++++.+|++|.+.  +.+.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   69 (221)
T 3ew7_A            6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ------------THKDINILQKDIFDLTL--SDLS--DQNVVVDAY   69 (221)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH------------HCSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh------------ccCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence            7999999999999999999999999998765211            11578999999999887  7777  999999999


Q ss_pred             CCCc-------cchHHHHHhCC--CCCcEEEEecceeee-cCCCCCCCCCCCCCccccc-cchhhHHHH--Hh--hcCCc
Q 024575           81 GREA-------DEVEPILDALP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN  145 (265)
Q Consensus        81 ~~~~-------~~~~~l~~~~~--~~~~~v~~Ss~~~~~-~~~~~~~~e~~~~~~~~~~-~~k~~~E~~--~~--~~~~~  145 (265)
                      +...       ..+.+++++++  +++++|++||..++. .....+..++.+..|.+.| .+|...|.+  ++  +.+++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~  149 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS  149 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            8742       45688999987  589999999987654 3333345556666666666 889888876  55  68999


Q ss_pred             eeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHHH
Q 024575          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       146 ~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (265)
                      ++++||+++|||+.....   +   ......+...+++   .++++++|+|++++.+++++...++.|+++++...+.+|
T Consensus       150 ~~ivrp~~v~g~~~~~~~---~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          150 WTYISPSAMFEPGERTGD---Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             EEEEeCcceecCCCccCc---e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999999999998432111   1   1112233333332   378999999999999999998889999999988777654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=3.6e-29  Score=195.51  Aligned_cols=193  Identities=12%  Similarity=0.159  Sum_probs=153.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||++|++++++|+++|++|++++|++.+.. .+.          ..++ +++.+|++  +.+.+.+.  ++|+|||+
T Consensus        27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~-~~~----------~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~   91 (236)
T 3e8x_A           27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGP-ELR----------ERGASDIVVANLE--EDFSHAFA--SIDAVVFA   91 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH----------HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEEEECChHHHH-HHH----------hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence            799999999999999999999999999876521 111          2478 99999998  67778888  99999999


Q ss_pred             CCCC------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhcCC
Q 024575           80 NGRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGV  144 (265)
Q Consensus        80 a~~~------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~  144 (265)
                      ++..            ..++.+++++++  ++++||++||.+.+..       +..+ .+...| .+|..+|.+++..++
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi  163 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL  163 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence            9963            445778999987  7899999999655321       1111 334445 999999999999999


Q ss_pred             ceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccCHH
Q 024575          145 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (265)
Q Consensus       145 ~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (265)
                      +++++||++++|+.....              +..........++++++|+|++++.+++++...++.|+++++ .+++.
T Consensus       164 ~~~~lrpg~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~  228 (236)
T 3e8x_A          164 DYTIVRPGPLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA  228 (236)
T ss_dssp             EEEEEEECSEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred             CEEEEeCCcccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence            999999999999853221              122233445689999999999999999998777899999987 59999


Q ss_pred             HHHHHHH
Q 024575          225 GLARACA  231 (265)
Q Consensus       225 el~~~i~  231 (265)
                      |+++.++
T Consensus       229 e~~~~i~  235 (236)
T 3e8x_A          229 KVVEQLG  235 (236)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhc
Confidence            9998765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=2.3e-28  Score=201.05  Aligned_cols=207  Identities=17%  Similarity=0.234  Sum_probs=166.0

Q ss_pred             CCccccchHHHHHHHHHc-CC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||||++|++++++|++. |+ +|++++|++.+.....     ..+.  ..++.++.+|++|.+.+.++++  ++|+|||
T Consensus        27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-----~~~~--~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih   97 (344)
T 2gn4_A           27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-----MEFN--DPRMRFFIGDVRDLERLNYALE--GVDICIH   97 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-----HHHC--CTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-----HHhc--CCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999 97 9999999865421100     0000  2578999999999999999998  9999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        79 ~a~~~~----------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +|+...                .++.++++++.  ++++||++||..++              .|.+.| .+|..+|.++
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCSDKLF  163 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHHHHHH
Confidence            998642                34578888876  78999999997653              233445 9999999998


Q ss_pred             hh-------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCC-cccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          140 ES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       140 ~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                      +.       .+++++++|||++||++  ..+++.+...+..++ ++.+. ++...++|++++|+|++++.+++++. .++
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~--~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~  239 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSR--GSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGE  239 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCT--TSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSC
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCC--CCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCC
Confidence            53       46999999999999986  356677777777777 66664 67788999999999999999998764 477


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhC
Q 024575          212 VFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      +|+++++ .+++.|+++.+.+.++
T Consensus       240 ~~~~~~~-~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          240 IFVPKIP-SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EEEECCC-EEEHHHHHHHHCTTCC
T ss_pred             EEecCCC-cEEHHHHHHHHHHhCC
Confidence            9998876 5999999999987654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=1.8e-28  Score=189.95  Aligned_cols=198  Identities=14%  Similarity=0.133  Sum_probs=147.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++|++|++++|++.+.....           ..+++++.+|++|.+.  +.+.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL   70 (224)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence            799999999999999999999999999876532111           2689999999999887  7777  999999999


Q ss_pred             CC---------CccchHHHHHhCC--CCCcEEEEecceeeecCCC---CCCCCCCCCCccccc-cchhhHHHH--H-hhc
Q 024575           81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL---LPHCETDTVDPKSRH-KGKLNTESV--L-ESK  142 (265)
Q Consensus        81 ~~---------~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~---~~~~e~~~~~~~~~~-~~k~~~E~~--~-~~~  142 (265)
                      +.         +...+.+++++++  + ++||++||.+++.....   .+.++...+.|.+.| .+|...|.+  + ++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            87         3456889999988  6 99999999866543222   233333344446666 899998865  2 367


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +++++++||+++||++....+.       .....+..   +....++++++|+|++++.+++++...+++|++++.+..+
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            8999999999999985433211       11222222   2345689999999999999999988889999999876655


Q ss_pred             HH
Q 024575          223 FD  224 (265)
Q Consensus       223 ~~  224 (265)
                      +.
T Consensus       220 ~~  221 (224)
T 3h2s_A          220 HH  221 (224)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=8.6e-28  Score=189.40  Aligned_cols=204  Identities=15%  Similarity=0.148  Sum_probs=156.3

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||+|++|++++++|+++  |++|++++|++.+.. .+           ..++.++.+|++|.+++.++++  ++|+|||
T Consensus        10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   75 (253)
T 1xq6_A           10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   75 (253)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hc-----------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999  899999999865421 11           2578899999999999999998  8999999


Q ss_pred             cCCCCc-----------------------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc-
Q 024575           79 INGREA-----------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (265)
Q Consensus        79 ~a~~~~-----------------------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-  126 (265)
                      +++...                             .++.+++++++  ++++||++||..++..        ..+..+. 
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~  147 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLG  147 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcccccc
Confidence            998531                             23567888876  7889999999876421        1111111 


Q ss_pred             -ccc-cchhhHHHHHhhcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          127 -SRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       127 -~~~-~~k~~~E~~~~~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                       ..| .+|..+|.++++.+++++++||+++||+.... .+.        .+....+++   ...++++++|+|++++.++
T Consensus       148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELLQ---TDTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEE--------EESTTGGGG---SSCCEEEHHHHHHHHHHHT
T ss_pred             chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhh--------ccCCcCCcC---CCCcEEcHHHHHHHHHHHH
Confidence             123 68999999999999999999999999986321 110        111111111   1346999999999999999


Q ss_pred             cCccccCceEEecCCC---ccCHHHHHHHHHHHhCCC
Q 024575          204 GNEKASRQVFNISGEK---YVTFDGLARACAKVTGLL  237 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~---~~s~~el~~~i~~~~g~~  237 (265)
                      +++...++.|++++++   .+|+.|+++.+++.+|++
T Consensus       217 ~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          217 LFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             TCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             cCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            9876667899999864   599999999999998864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.95  E-value=4.7e-27  Score=191.72  Aligned_cols=225  Identities=21%  Similarity=0.264  Sum_probs=154.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEc-CCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++++++|+++|++|+++.| ++... ......  ..+.....+++++.+|++|.+++.++++  ++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~   81 (322)
T 2p4h_X            7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERK-RDVSFL--TNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT   81 (322)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCCC-----CCCHHH--HTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred             ECChhHHHHHHHHHHHHCCCEEEEEEeCCccch-hHHHHH--HhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence            799999999999999999999999998 54321 000000  0000001357889999999999999998  99999999


Q ss_pred             CCCC---------------ccchHHHHHhCC---CCCcEEEEecceee-ecC-CCCCCCCCCCC--------Ccc--ccc
Q 024575           80 NGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY-LKS-DLLPHCETDTV--------DPK--SRH  129 (265)
Q Consensus        80 a~~~---------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~-~~~-~~~~~~e~~~~--------~~~--~~~  129 (265)
                      |+..               ..++.++++++.   ++++||++||..++ +.. ...+++|+...        .|.  .|.
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            9642               123567888865   46899999998754 322 12345555421        222  244


Q ss_pred             cchhhHHHHHh----hcCCceeEeecceeeCCCCCCchhHHH--HHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      .+|..+|.++.    +.+++++++||+++|||+....+...+  +.....+....+ +.  ...+++|++|+|++++.++
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHh
Confidence            99999998763    368999999999999997533221111  111233443332 22  3348999999999999999


Q ss_pred             cCccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      +++...+ .|+ ++++.+|+.|+++.+.+.++
T Consensus       239 ~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          239 ENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             hCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence            7755444 588 56688999999999998875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=1.1e-27  Score=196.88  Aligned_cols=226  Identities=20%  Similarity=0.232  Sum_probs=156.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++++++|+++|++|+++.|+..... ....  ...+. ...+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~-~~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   88 (338)
T 2rh8_A           15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK-KVSH--LLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA   88 (338)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTT-TTHH--HHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhh-hHHH--HHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence            799999999999999999999999999765411 1000  00111 12468899999999999999998  899999998


Q ss_pred             CCC---------------ccchHHHHHhCC--C-CCcEEEEecce-eeecC---CCCCCCCCCCC--------Cc-c-cc
Q 024575           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKS---DLLPHCETDTV--------DP-K-SR  128 (265)
Q Consensus        81 ~~~---------------~~~~~~l~~~~~--~-~~~~v~~Ss~~-~~~~~---~~~~~~e~~~~--------~~-~-~~  128 (265)
                      +..               ..++.++++++.  + +++|||+||.. +|+..   ...+++|+...        .| . .|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            752               123667888865  3 79999999987 34321   11255665421        11 1 24


Q ss_pred             ccchhhHHHHHh----hcCCceeEeecceeeCCCCCCchhHHH--HHHHHcCCcccCCCC------CCceeeeeeHHHHH
Q 024575          129 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGS------GIQVTQLGHVKDLA  196 (265)
Q Consensus       129 ~~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~i~~~D~a  196 (265)
                      ..+|..+|.++.    +.+++++++||+++|||+........+  +.....+....+ +.      ....++++|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc-ccccccccccCcccEEEHHHHH
Confidence            499999998763    358999999999999997543221111  111123332111 11      11234899999999


Q ss_pred             HHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      ++++.+++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus       248 ~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          248 RAHIFVAEKESA-SGRYICCA-ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHCTTC-CEEEEECS-EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCCc-CCcEEEec-CCCCHHHHHHHHHHhCC
Confidence            999999987544 45788776 46999999999999876

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.95  E-value=4.4e-27  Score=193.14  Aligned_cols=224  Identities=18%  Similarity=0.233  Sum_probs=156.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcccc--CCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++++++|+++|++|++++|++.....  .+..     +.....+++++.+|++|.+++.++++  ++|+|||
T Consensus        11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   83 (337)
T 2c29_D           11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-----LPKAETHLTLWKADLADEGSFDEAIK--GCTGVFH   83 (337)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-----STTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-----cccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence            8999999999999999999999999998653110  0000     00001368899999999999999998  9999999


Q ss_pred             cCCCC---------------ccchHHHHHhCC--C-CCcEEEEecce-eeecCC-CCCCCCCCCCC---------ccccc
Q 024575           79 INGRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKSD-LLPHCETDTVD---------PKSRH  129 (265)
Q Consensus        79 ~a~~~---------------~~~~~~l~~~~~--~-~~~~v~~Ss~~-~~~~~~-~~~~~e~~~~~---------~~~~~  129 (265)
                      +|+..               ..++.++++++.  + +++|||+||.. +|+... ..+.+|+....         +.+.|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            99752               123567888766  5 89999999987 444322 23345553211         23335


Q ss_pred             -cchhhHHHHHh----hcCCceeEeecceeeCCCCCCchhHHHHHH--HHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 -~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                       .+|..+|.++.    +.+++++++||+++|||+....+...+...  ...+.... ++.. ....++|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAH-YSII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGG-HHHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcc-cccc-CCCCEEEHHHHHHHHHHH
Confidence             99999998763    468999999999999997543332222211  12233211 1111 234599999999999999


Q ss_pred             hcCccccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      ++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus       242 ~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          242 FENPKA-EGRYICSS-HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred             hcCccc-CceEEEeC-CCCCHHHHHHHHHHHCC
Confidence            987644 44786655 56899999999999874

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=1.6e-26  Score=176.54  Aligned_cols=184  Identities=18%  Similarity=0.261  Sum_probs=143.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++|++|++++|++.+... ..          ..+++++.+|++|++++.++++  ++|+|||++
T Consensus         9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   75 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-EG----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-SS----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-cc----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence            6999999999999999999999999998765321 11          2678999999999999999998  899999999


Q ss_pred             CCCc---------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhcCCceeE
Q 024575           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS  148 (265)
Q Consensus        81 ~~~~---------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~~~i  148 (265)
                      +...         ..+.+++++++  ++++||++||..+|+.....+.       +...| .+|..+|.++++.++++++
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------~~~~y~~~K~~~e~~~~~~~i~~~~  148 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-------RLQAVTDDHIRMHKVLRESGLKYVA  148 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-------GGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-------cchhHHHHHHHHHHHHHhCCCCEEE
Confidence            8643         24778888877  7899999999998865432111       34445 9999999999999999999


Q ss_pred             eecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCC
Q 024575          149 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  219 (265)
Q Consensus       149 ~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (265)
                      +||+.+ +++.. ..+..            ...+.+.  .++++++|+|++++.+++++...++.|++++++
T Consensus       149 lrp~~~-~~~~~~~~~~~------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          149 VMPPHI-GDQPLTGAYTV------------TLDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             ECCSEE-ECCCCCSCCEE------------ESSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             EeCCcc-cCCCCCcceEe------------cccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            999997 33221 11110            0111111  489999999999999999877678899999874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=6.6e-28  Score=191.73  Aligned_cols=198  Identities=13%  Similarity=0.030  Sum_probs=162.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||+||++++++|+++|++|++++|++...   .           ..+++++.+|++|.+.+.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   71 (267)
T 3ay3_A            8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---A-----------EAHEEIVACDLADAQAVHDLVK--DCDGIIHLG   71 (267)
T ss_dssp             ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---C-----------CTTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---c-----------CCCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999987642   1           1467889999999999999998  899999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCCcEEEEecceeeecC-CCCCCCCCCCCCccccc-cchhhHHHHHh----
Q 024575           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (265)
Q Consensus        81 ~~~------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~-~~~~~~e~~~~~~~~~~-~~k~~~E~~~~----  140 (265)
                      +..            ..++.++++++.  ++++||++||..+|+.. ...+++|+.+..|.+.| .+|..+|.+++    
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  151 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH  151 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            863            234677888876  77899999999999864 35678888888887777 99999999874    


Q ss_pred             hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCc
Q 024575          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       141 ~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (265)
                      +.+++++++||+++|+..                      .++....++++++|+|++++.+++++...+++|++.++..
T Consensus       152 ~~gi~~~~lrp~~v~~~~----------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~  209 (267)
T 3ay3_A          152 KFDIETLNIRIGSCFPKP----------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT  209 (267)
T ss_dssp             TTCCCEEEEEECBCSSSC----------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred             HcCCCEEEEeceeecCCC----------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence            468999999999998421                      0122356889999999999999988765457899998888


Q ss_pred             cCHHHHHHHHHHHhCCCc
Q 024575          221 VTFDGLARACAKVTGLLD  238 (265)
Q Consensus       221 ~s~~el~~~i~~~~g~~~  238 (265)
                      .++.|+.+.  +.+|.+.
T Consensus       210 ~~~~d~~~~--~~lg~~p  225 (267)
T 3ay3_A          210 ESWWDNDKS--AFLGWVP  225 (267)
T ss_dssp             SCCBCCGGG--GGGCCCC
T ss_pred             ccccCHHHH--HHcCCCC
Confidence            888888877  7788665

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=4.1e-27  Score=187.12  Aligned_cols=198  Identities=12%  Similarity=0.013  Sum_probs=162.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||+||+++++.|+++|++|++++|++.+..              ..+++++.+|++|.+++.++++  ++|+|||+|
T Consensus         9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876632              2678999999999999999999  999999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCCcEEEEecceeeec-CCCCCCCCCCCCCccccc-cchhhHHHHHh----
Q 024575           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (265)
Q Consensus        81 ~~~------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~----  140 (265)
                      |..            ..++.+++++++  +.++||++||..+|+. ....+++|+.+..|.+.| .+|..+|.+++    
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            873            334667888876  7789999999999973 345567788787787777 99999999874    


Q ss_pred             hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCc
Q 024575          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       141 ~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (265)
                      +.+++++++||+.++++.                      .++....+|++++|+++++..+++.+...+.++++.+++.
T Consensus       153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            578999999999999862                      2344567889999999999999988776566888888887


Q ss_pred             cCHHHHHHHHHHHhCCCc
Q 024575          221 VTFDGLARACAKVTGLLD  238 (265)
Q Consensus       221 ~s~~el~~~i~~~~g~~~  238 (265)
                      .++.++...  +.+|...
T Consensus       211 ~~~~~~~~~--~~~g~~p  226 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWKP  226 (267)
T ss_dssp             TCCBCCGGG--GGGCCCC
T ss_pred             CCcccChhH--HHCCCCC
Confidence            777766443  5566543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=5.2e-27  Score=180.57  Aligned_cols=182  Identities=18%  Similarity=0.134  Sum_probs=141.2

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||||++|++++++|+++|+  +|++++|++..     .          ..+++++.+|++|.+++.+++    +|+|||
T Consensus        11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~----------~~~~~~~~~D~~~~~~~~~~~----~d~vi~   71 (215)
T 2a35_A           11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----E----------HPRLDNPVGPLAELLPQLDGS----IDTAFC   71 (215)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----C----------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----c----------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence            79999999999999999998  99999998765     1          257888999999888777665    999999


Q ss_pred             cCCCCc--------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        79 ~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      +++...              .++.+++++++  ++++||++||..+|+.             +.+.| .+|..+|.+++.
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHH
Confidence            998642              34677888876  7789999999988742             22344 999999999999


Q ss_pred             cCCc-eeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCc
Q 024575          142 KGVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       142 ~~~~-~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (265)
                      .+++ ++++||+.+|||+....+...+    . ....++ .+  ..+++++++|+|++++.+++++.  ++.|++++++.
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~  208 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREEFRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVESDEL  208 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHH
T ss_pred             cCCCeEEEEeCceeeCCCCcchHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHH
Confidence            9999 9999999999997543332211    1 111121 22  26789999999999999998875  67999998776


Q ss_pred             cCHH
Q 024575          221 VTFD  224 (265)
Q Consensus       221 ~s~~  224 (265)
                      +++.
T Consensus       209 ~~~~  212 (215)
T 2a35_A          209 RKLG  212 (215)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            5543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.3e-24  Score=169.48  Aligned_cols=192  Identities=17%  Similarity=0.185  Sum_probs=138.8

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||||+||+++++.|+++| ++|++++|++++... +.          ..+++++.+|++|++++.++++  ++|+|||+
T Consensus        29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~   95 (236)
T 3qvo_A           29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-PY----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN   95 (236)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-SC----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred             EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-cc----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence            7999999999999999999 999999999776332 22          2578999999999999999999  99999999


Q ss_pred             CCCCc--cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeecceee
Q 024575           80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (265)
Q Consensus        80 a~~~~--~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~~~i~  155 (265)
                      ++...  ..+++++++++  ++++||++||..+|+.......... ...+..+...+..+|..+++.+++++++|||.++
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~  174 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN-NAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT  174 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch-hhcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence            98642  24667888876  7889999999999875433221111 1112233355677888888999999999999999


Q ss_pred             CCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc-ccCceEEecCCCc
Q 024575          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY  220 (265)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~~~  220 (265)
                      ++.....             ... .........+++.+|+|++++.++.++. ..++.|++++++.
T Consensus       175 ~~~~~~~-------------~~~-~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          175 DEDIIDY-------------ELT-SRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             CCSCCCC-------------EEE-CTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCCCcce-------------EEe-ccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            8742110             000 0111112368999999999999998876 4688999998764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=8.1e-25  Score=171.37  Aligned_cols=186  Identities=18%  Similarity=0.165  Sum_probs=139.6

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||||+||++++++|+++|+  +|++++|++..... ..          ..++.++.+|++|++++.++++  ++|+|||
T Consensus        24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   90 (242)
T 2bka_A           24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-EA----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   90 (242)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-GG----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc-cc----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence            79999999999999999999  99999998765221 11          2478899999999999999998  9999999


Q ss_pred             cCCCC-------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcC
Q 024575           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (265)
Q Consensus        79 ~a~~~-------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~  143 (265)
                      ++|..             ..++.+++++++  +.++||++||..+|+.            ....|..+|..+|.+++..+
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------~~~~Y~~sK~~~e~~~~~~~  158 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------SNFLYLQVKGEVEAKVEELK  158 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHHHTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------CcchHHHHHHHHHHHHHhcC
Confidence            99974             335667888876  6789999999988742            11234499999999999989


Q ss_pred             C-ceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecC
Q 024575          144 V-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (265)
Q Consensus       144 ~-~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (265)
                      + +++++|||.+|||.........+........+. .+    ....+++++|+|++++.++.++... +.+.+.+
T Consensus       159 ~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~  227 (242)
T 2bka_A          159 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SW----ASGHSVPVVTVVRAMLNNVVRPRDK-QMELLEN  227 (242)
T ss_dssp             CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TG----GGGTEEEHHHHHHHHHHHHTSCCCS-SEEEEEH
T ss_pred             CCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-cc----cCCcccCHHHHHHHHHHHHhCcccc-CeeEeeH
Confidence            9 599999999999964333333333333222111 11    1235899999999999999887653 3565544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=2.2e-24  Score=166.64  Aligned_cols=193  Identities=18%  Similarity=0.229  Sum_probs=140.3

Q ss_pred             CCccccchHHHHHHHH-HcCCeEEEEEcCCC-ccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||||++|++++++|+ +.|++|++++|++. +.. .+        .....++.++.+|++|++++.++++  ++|+|||
T Consensus        11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~-~~--------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~   79 (221)
T 3r6d_A           11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP-PE--------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV   79 (221)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSC-HH--------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EeCCcHHHHHHHHHHHhcCCceEEEEecCccccch-hh--------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999 89999999999866 421 11        0013689999999999999999998  9999999


Q ss_pred             cCCC-CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc-ccccchhhHHHHHhhcCCceeEeeccee
Q 024575           79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPVYI  154 (265)
Q Consensus        79 ~a~~-~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~~~~~k~~~E~~~~~~~~~~~i~r~~~i  154 (265)
                      +++. +.. +++++++++  +.++||++||..+|+........+... ... .|..+|..+|.++++.+++++++|||.+
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~-~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v  157 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFD-NLPISYVQGERQARNVLRESNLNYTILRLTWL  157 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHH-TSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccc-ccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence            9987 344 888888877  778999999999875321100000000 111 3448899999999999999999999999


Q ss_pred             eCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh--cCcc-ccCceEEecCCC
Q 024575          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK  219 (265)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~--~~~~-~~~~~~~i~~~~  219 (265)
                      +++.....+            ... .........+++.+|+|++++.++  .++. ..++.+.++++.
T Consensus       158 ~~~~~~~~~------------~~~-~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          158 YNDPEXTDY------------ELI-PEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             ECCTTCCCC------------EEE-CTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             cCCCCCcce------------eec-cCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            987321111            000 011111224899999999999999  7765 356677787654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.85  E-value=1.9e-22  Score=158.99  Aligned_cols=200  Identities=19%  Similarity=0.159  Sum_probs=135.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (265)
                      |||+|+||+++++.|+++|++|++++|++.+..               .   .+.+|+++.+++.++++..  ++|+|||
T Consensus         7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            7 TGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            799999999999999999999999999876521               1   1578999999888887643  8999999


Q ss_pred             cCCCCc-------------cchHHHHHhC----C--CCCcEEEEecceeeecCCCCC-CC-------CCC-------CCC
Q 024575           79 INGREA-------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLP-HC-------ETD-------TVD  124 (265)
Q Consensus        79 ~a~~~~-------------~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~-~~-------e~~-------~~~  124 (265)
                      +||...             .++.++++++    +  +.+++|++||..+|+.....+ ..       ++.       ...
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            999743             1234455542    2  458999999999885431100 00       000       012


Q ss_pred             ccccc-cchhhHHHHHhh-------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      +...| .+|..+|.+++.       .+++++++|||.++++.     ...++............. + ....+++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~-----~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL-----LQASKADPRYGESTRRFV-A-PLGRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH-----HHHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh-----hhhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence            33445 999999987642       58999999999999873     111111100001111111 1 334789999999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCccCHHH
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~e  225 (265)
                      ++++.++.++  ...|+.|+++++..+++.|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999875  3458899999987766543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.85  E-value=1.9e-21  Score=155.53  Aligned_cols=213  Identities=17%  Similarity=0.136  Sum_probs=146.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.......        ......++.++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A           11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL--------VAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH--------HHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            89999999999999999999999999986652211        1112357899999999999988877643     7999


Q ss_pred             EEEcCCCCc--------------------cc----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||...                    .+    ++.++..++  +..++|++||...+.           +..+.+.|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  151 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFAGFSAY  151 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCCCchHH
Confidence            999999631                    12    344555554  678999999987642           22233445


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC------chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|..+|.+.+       ..++++++++||.+.++....      .....+............   ......+.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dv  228 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ---GSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH---C-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh---hccCCCCCCHHHH
Confidence             99999988763       368999999999998874211      111111111111111111   1123467789999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      |++++.+++++.. +..|+++++......+....+.+.++.
T Consensus       229 a~a~~~~~~~~~~-~~~~~l~s~~~~~i~g~~~~i~~~~~~  268 (281)
T 3m1a_A          229 AAAIRLALDTEKT-PLRLALGGDAVDFLTGHLDSVRAELTE  268 (281)
T ss_dssp             HHHHHHHHHSSSC-CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCC-CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence            9999999988764 568999988777777777777776553

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.84  E-value=3.2e-21  Score=153.96  Aligned_cols=210  Identities=15%  Similarity=0.142  Sum_probs=145.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+........     ..+. ...++.++.+|++|++++.++++.     .++|+
T Consensus        22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-----HHhC-CCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999754321100     0000 012788999999999998887763     27999


Q ss_pred             EEEcCCCCcc----------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||++|....                      +..+++++    +.  +..++|++||...+....          .+..
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  165 (278)
T 2bgk_A           96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH  165 (278)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred             EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CCCc
Confidence            9999986321                      12233333    22  567999999988763211          1233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .| .+|...|.+++       ..+++++++|||.++++......  .............       .....+++++|+|+
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~  238 (278)
T 2bgk_A          166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGTLLRAEDVAD  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSCCCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccccCCHHHHHH
Confidence            34 89999988763       25899999999999998632211  1122222211111       11235788999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccCHHHHHHHHHHH
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKV  233 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~  233 (265)
                      +++.++..+.  ..|+.|++.++..+++.|+++.+.+.
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             HHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence            9999986542  35889999999999999999987654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.84  E-value=9.2e-21  Score=149.39  Aligned_cols=198  Identities=13%  Similarity=0.120  Sum_probs=137.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|++++.++++.     .++|+
T Consensus        17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            89999999999999999999999999986542110     011111235688999999999988887763     27999


Q ss_pred             EEEcCCCCcc-------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      |||+||....                   +..++++++    +  +..++|++||...+..           ..+...| 
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  160 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------CCCCcccH
Confidence            9999986421                   122334432    3  5789999999887532           1223345 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...|.+++       ..+++++++|||.++++.........+......+.++         ..+.+++|+|++++.+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHH
Confidence            89999988763       2489999999999998742111222333333333222         2466899999999999


Q ss_pred             hcCcc--ccCceEEecCCCccCH
Q 024575          203 LGNEK--ASRQVFNISGEKYVTF  223 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~s~  223 (265)
                      +..+.  ..|+.|+++++..+|+
T Consensus       232 ~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          232 CSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCCC
T ss_pred             hCCccccCCCcEEEECCceeccC
Confidence            87643  3578999999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.82  E-value=6.6e-21  Score=149.27  Aligned_cols=192  Identities=15%  Similarity=0.156  Sum_probs=133.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||++++++|+++|++|++++|++.....         +.....+++++.+|++|++++.++++.. .+|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A           13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS---------LAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999999999998654211         1111146778899999999999998743 48999999


Q ss_pred             CCCCc--------------------cchHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cc
Q 024575           80 NGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (265)
Q Consensus        80 a~~~~--------------------~~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~  131 (265)
                      ||...                    .++.+++++    +.  + ..++|++||...+...           .+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  152 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNLITYSST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCcchhHHH
Confidence            99532                    122333443    22  3 6799999998875321           123334 89


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      |...|.+++       ..+++++++|||.++++..... ....++.....+.+         ..++++++|+|++++.++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHh
Confidence            999998763       2589999999999998742100 01122222222221         246889999999999999


Q ss_pred             cCcc--ccCceEEecCCCcc
Q 024575          204 GNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++.  ..|+.+++.++...
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGGG
T ss_pred             CchhhcccCCEEEECCCccC
Confidence            7653  35788999887543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.81  E-value=9.4e-19  Score=138.17  Aligned_cols=185  Identities=17%  Similarity=0.180  Sum_probs=132.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.....              ...+.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            899999999999999999999999999866521              146889999999999988877643     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..++++++    +  +..++|++||...+...         +..+...|
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~~~Y  170 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VGMPSALA  170 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TTCCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CCCccHHH
Confidence            9999986421                    233344442    3  56899999997654211         11223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+++|.......    .......+         ...+.+++|+|++++.
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~----~~~~~~~p---------~~r~~~~~dva~av~~  237 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH----STLAGLHP---------VGRMGEIRDVVDAVLY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH----HHHHTTST---------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH----HHHhccCC---------CCCCcCHHHHHHHHHH
Confidence             88999888763       248999999999999985432211    11112211         1245679999999999


Q ss_pred             HhcCccccCceEEecCCCcc
Q 024575          202 VLGNEKASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~  221 (265)
                      +.+.....|+.+++.+|...
T Consensus       238 L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          238 LEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             HHHCTTCCSCEEEESTTGGG
T ss_pred             hcccCCCCCcEEEECCCeec
Confidence            86665567899999998654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.81  E-value=2e-20  Score=151.20  Aligned_cols=213  Identities=17%  Similarity=0.167  Sum_probs=143.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+... ..++.++.+|++|.+++.++++..     .+|
T Consensus        32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     111111 246889999999999988877642     679


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----C--C-CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~--~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +|||+||....                    +..+++++    +  + +..++|++||...+..           ..+..
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~  175 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------SGFVV  175 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------CTTCH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-----------CCCcc
Confidence            99999995321                    12223333    2  2 4579999999876532           11233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH--HHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .| .+|..+|.+.+       ..+++++++|||.+++++.......  ..........++         ..+.+++|+|+
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~  246 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELAN  246 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CCCCCHHHHHH
Confidence            34 89999988763       2689999999999998742111100  111122222111         24678999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +++.++..+.  ..|+.|++.++..+++.++++.+.+..|..+
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~  289 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQW  289 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHH
T ss_pred             HHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccccc
Confidence            9999987543  2588999999988888888888777666544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.81  E-value=6.7e-19  Score=140.52  Aligned_cols=209  Identities=15%  Similarity=0.161  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH---hhhhccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+   .....++.++.+|++|++++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A           12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999865421100     000   001246889999999999888877632     7


Q ss_pred             ccEEEEcCCCCcc------------------------chHHHHHh----CC-CCCcEEEEeccee-eecCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGV-YLKSDLLPHCETDT  122 (265)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l~~~----~~-~~~~~v~~Ss~~~-~~~~~~~~~~e~~~  122 (265)
                      +|++||+||....                        +..+++++    ++ ...++|++||... +..           
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  155 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-----------  155 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC-----------
Confidence            9999999986321                        11122233    32 2389999999875 421           


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh--HHH------HHHHHcCCcccCCCCCCce
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWF------FHRLKAGRPIPIPGSGIQV  186 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~  186 (265)
                      ..+...| .+|...+.+.+       ..++++++++||.++++.......  ...      .......  .+       .
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~  226 (278)
T 1spx_A          156 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC--VP-------A  226 (278)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH--CT-------T
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc--CC-------C
Confidence            1122334 89999888763       368999999999999885321100  000      1111111  11       1


Q ss_pred             eeeeeHHHHHHHHHHHhcCcc---ccCceEEecCCCccCHHHHHHHHHHHh
Q 024575          187 TQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKVT  234 (265)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~~~s~~el~~~i~~~~  234 (265)
                      ..+.+++|+|++++.++..+.   ..|+.+++.++..+++.++++.+.+.+
T Consensus       227 ~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            246789999999999887543   358899999999999999999988764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.80  E-value=4.5e-19  Score=139.33  Aligned_cols=194  Identities=14%  Similarity=0.254  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH-hhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+ .....++.++.+|++|++++.++++..     ++|
T Consensus         8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETA-----RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865421100     000 011256889999999999888877632     799


Q ss_pred             EEEEcCCCCccc-----------------------h----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           75 VVYDINGREADE-----------------------V----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        75 ~vi~~a~~~~~~-----------------------~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|||+||.....                       .    +.++..++  +.+++|++||...+..           ..+
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  151 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-----------FPG  151 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTT
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-----------CCC
Confidence            999999863210                       1    22334443  5689999999876521           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..+++++++|||.++++...... ...+........+         ...+.+.+|+|
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva  222 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP---------QKEIGTAAQVA  222 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT---------TCSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHH
Confidence            3334 89999988763       24899999999999998532111 1112222222211         12467899999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++.++..+.  ..|+.+++.++.
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcCchhhcccCCEEEECCce
Confidence            99999987653  358899998874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.80  E-value=6.6e-20  Score=144.83  Aligned_cols=201  Identities=18%  Similarity=0.203  Sum_probs=134.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+......        ...+....+.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQ--------AAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211        11122356889999999999888877643     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    ++.++++++    .  + ..++|++||...+..           ..+...
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  154 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----------EALVAI  154 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------CCCChH
Confidence            9999997321                    223344442    2  2 568999999876421           112333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHc---CCcccCCCCCCceeeeeeHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      | .+|...+.+.+       ..++++++++||.+++|....  ...++.....   ........+......+.+++|+|+
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence            5 99999988763       358999999999999984210  1111111111   011111111122346788999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +++.++....  ..|+.|++.+|..+|
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            9999886543  358899999987654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.80  E-value=7.1e-19  Score=138.99  Aligned_cols=196  Identities=13%  Similarity=0.204  Sum_probs=132.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.....++.++.+|++|++++.++++.     .++|+
T Consensus        19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-----EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     11111134689999999999998887763     27999


Q ss_pred             EEEcCCCCc-c--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA-D--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~-~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+||... .                    ++.+++++    ++  +..++|++||...+...         +..+...
T Consensus        94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~~~~  164 (260)
T 3awd_A           94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQQAA  164 (260)
T ss_dssp             EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCCHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCCccc
Confidence            999998643 1                    12233333    22  56899999998754211         1112234


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...|.+++       ..+++++++|||.++++...... ...+........++         ..+++++|+|+++
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  235 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHH
Confidence            5 89999988763       26899999999999998532011 11222233222211         2467899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +.++..+.  ..|+.|++.++.
T Consensus       236 ~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          236 QFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhccCCCcEEEECCce
Confidence            99987542  357899999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.80  E-value=4.2e-19  Score=139.15  Aligned_cols=195  Identities=18%  Similarity=0.240  Sum_probs=135.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A           10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV----EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999886543221111    111222357889999999999888877643     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    ++.++++++    +  +..++|++||...+..           ..+...|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  154 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-----------NPGQANY  154 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------CCCChHH
Confidence            9999997421                    233344443    3  6679999999776421           1123334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+.++... .+............++         ..+.+.+|+|++++.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~  224 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-ALSDELKEQMLTQIPL---------ARFGQDTDIANTVAF  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS-CSCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc-ccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887753       46899999999999987532 2233334444333332         234568999999999


Q ss_pred             HhcCcc--ccCceEEecCCCc
Q 024575          202 VLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++..+.  ..|+.+++.+|..
T Consensus       225 l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          225 LASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             HTSGGGTTCCSCEEEESTTSC
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            887653  3588999998753

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.79  E-value=8.9e-20  Score=145.79  Aligned_cols=213  Identities=19%  Similarity=0.163  Sum_probs=146.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh---ccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+....   ..+.++.+|++|++++.++++..     +
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-----QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999875521111     0111111   26889999999999888877642     7


Q ss_pred             ccEEEEcCCCC-c--------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           73 FDVVYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        73 ~d~vi~~a~~~-~--------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|++||+||.. .                    .+..+++++    +.  +..++|++||...+..           ..+
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  160 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-----------HRW  160 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-----------CTT
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC-----------CCC
Confidence            89999999961 1                    112233333    22  4458999999887522           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..++++++++||.++++..... .............++         ..+.+++|+|
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva  231 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVA  231 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2334 99999988763       3579999999999988742100 001111222222222         2345699999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCccC-HHHHHHHHHHHhCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYVT-FDGLARACAKVTGLLD  238 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~  238 (265)
                      ++++.++....  ..|+.+++.+|..++ ..++++.+.+.+|.+.
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            99999987643  368999999998877 7789999999998765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=4.6e-19  Score=138.54  Aligned_cols=185  Identities=16%  Similarity=0.196  Sum_probs=130.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc----CccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|++..                 ..+.++.+|++|++++.++++..    ++|++
T Consensus         8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            7999999999999999999999999998651                 34578999999999988887643    78999


Q ss_pred             EEcCCCCcc------------------------chHHHHHh----CCC-----C---CcEEEEecceeeecCCCCCCCCC
Q 024575           77 YDINGREAD------------------------EVEPILDA----LPN-----L---EQFIYCSSAGVYLKSDLLPHCET  120 (265)
Q Consensus        77 i~~a~~~~~------------------------~~~~l~~~----~~~-----~---~~~v~~Ss~~~~~~~~~~~~~e~  120 (265)
                      ||++|....                        +..+++++    +..     .   .++|++||...+...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            999986321                        12233333    221     1   289999998876421        


Q ss_pred             CCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeH
Q 024575          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (265)
                         .+...| .+|...+.+.+       ..+++++++|||.++++.... +...+........++  .      ..+.++
T Consensus       143 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~------~~~~~~  210 (242)
T 1uay_A          143 ---IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P------PRLGRP  210 (242)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S------CSCCCH
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c------ccCCCH
Confidence               123344 88988887753       348999999999999874211 111222222222111  0      236789


Q ss_pred             HHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          193 KDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +|+|++++.++.++...|+.|++.++..++
T Consensus       211 ~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          211 EEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            999999999998755578899999887654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.79  E-value=2.1e-18  Score=137.03  Aligned_cols=207  Identities=16%  Similarity=0.142  Sum_probs=140.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+......        ...+...++.++.+|++|++++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           17 TGACGGIGLETSRVLARAGARVVLADLPETDLAG--------AAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHH--------HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHH--------HHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765221        11122357889999999999888877642     7999


Q ss_pred             EEEcCCCCcc----------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                      +..++++++    +  +..++|++||...+.           +..+..
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~  157 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA-----------AYDMST  157 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------BCSSCH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC-----------CCCCCh
Confidence            9999997411                      122333333    3  567999999987642           122233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+.+       ..++++++++||.+++|..................+.         ..+...+|+|+++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v  228 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELV  228 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            45 89999988763       3689999999999999864323323333333322222         1355689999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCccCHHHHHHHHHHHhC
Q 024575          200 VQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g  235 (265)
                      +.++....  ..|+.+++.+|.......+.+...+.++
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~  266 (271)
T 3tzq_B          229 CFLASDRAAFITGQVIAADSGLLAHLPGLPQIRASVAE  266 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTTBCTTHHHHHHHHHH
T ss_pred             HHHhCcccCCcCCCEEEECCCccccCCCccccCCcccc
Confidence            99987543  3688999998843333333344334333

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.79  E-value=2.9e-19  Score=141.68  Aligned_cols=196  Identities=14%  Similarity=0.123  Sum_probs=120.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+.....++.++.+|+++.+++.++++.      .++|
T Consensus        20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999865421110     11111124688999999999988887753      3799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|||+||....                    ++.++++++    +  +..++|++||...+..           ..+...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  163 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-----------ASVGSI  163 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-----------CCCCch
Confidence            99999986321                    123444443    3  6789999999876532           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..+++++++|||.++++.........+......         ......+.+++|+|++++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVIS---------RKPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHh---------cCCCCCCcCHHHHHHHHH
Confidence            4 89999888763       248999999999999985321110111111110         011124678999999999


Q ss_pred             HHhcCcc--ccCceEEecCCCcc
Q 024575          201 QVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++..+.  ..|+.+++.++..+
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHcCccccCccCcEEEEcCCccc
Confidence            9886542  35889999987643

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.79  E-value=5.7e-19  Score=138.78  Aligned_cols=194  Identities=19%  Similarity=0.189  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.. ..++.++.+|++|++++.++++.     ..+|+
T Consensus        12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A           12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421100     00000 14688999999999988887763     25999


Q ss_pred             EEEcCCCCcc------------------------chHHHHHhCC--CC-CcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |||+||....                        .++.+++.++  +. .++|++||...+...           .+...
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  154 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCCcc
Confidence            9999986321                        1233455554  44 799999998765321           12333


Q ss_pred             c-cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|..+|.+.+         ..+++++++|||+++++.... ........  .   .   ........+++++|+|++
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~--~---~---~~~~~~~~~~~~~dva~~  225 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAM--S---Q---RTKTPMGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHH--T---S---TTTCTTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhH--H---H---hhcCCCCCCcCHHHHHHH
Confidence            4 89998887753         458999999999999873111 00000000  0   0   001112347889999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCc
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++.++.++.  ..|+.+++.++..
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHcCcccccccCcEEEECCCcc
Confidence            999987643  3588999998754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.79  E-value=2.7e-19  Score=136.04  Aligned_cols=162  Identities=12%  Similarity=0.109  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|++|++++++|+ +|++|++++|++.                      .+.+|+++++++.++++.. ++|+|||+
T Consensus         9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999 9999999999753                      3689999999999888732 48999999


Q ss_pred             CCCCc--------------------cchHHHHHhCC-C---CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhh
Q 024575           80 NGREA--------------------DEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (265)
Q Consensus        80 a~~~~--------------------~~~~~l~~~~~-~---~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (265)
                      +|...                    .+..++++++. .   ..++|++||...+.           +..+...| .+|..
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED-----------PIVQGASAAMANGA  134 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS-----------CCTTCHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC-----------CCCccHHHHHHHHH
Confidence            98531                    22445666654 2   36899999976542           11223344 89999


Q ss_pred             HHHHHhh------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          135 TESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       135 ~E~~~~~------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      +|.+++.      .+++++++|||.++++..          ..  +.       .....++++++|+|++++.++... .
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~~--~~-------~~~~~~~~~~~dva~~~~~~~~~~-~  194 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------KL--EP-------FFEGFLPVPAAKVARAFEKSVFGA-Q  194 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------HH--GG-------GSTTCCCBCHHHHHHHHHHHHHSC-C
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCchh----------hh--hh-------hccccCCCCHHHHHHHHHHhhhcc-c
Confidence            9988743      389999999999998731          00  11       112356889999999999888543 3


Q ss_pred             cCceEEec
Q 024575          209 SRQVFNIS  216 (265)
Q Consensus       209 ~~~~~~i~  216 (265)
                      .|+.|++.
T Consensus       195 ~G~~~~vd  202 (202)
T 3d7l_A          195 TGESYQVY  202 (202)
T ss_dssp             CSCEEEEC
T ss_pred             cCceEecC
Confidence            57788763

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.79  E-value=2e-19  Score=140.79  Aligned_cols=192  Identities=13%  Similarity=0.134  Sum_probs=131.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||++++++|+++|++|++++|++++...         +.....+++++.+|++|++++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A           13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDS---------LVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999999999998654211         1110135778899999999999988743 58999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cc
Q 024575           80 NGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~  131 (265)
                      ||....                    +..+++++    ++  + ..++|++||...+..           ..+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  152 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------CCCCchHHHH
Confidence            986321                    12223333    22  3 678999999876421           1223345 99


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      |..+|.+++       ..++++++++||.++++...... ............         ....+++++|+|++++.++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---------PLGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC---------TTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHc
Confidence            999998763       25899999999999987421000 001111111111         1235788999999999999


Q ss_pred             cCcc--ccCceEEecCCCcc
Q 024575          204 GNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++.  ..|+.|++.++...
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            7642  35889999987543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.79  E-value=4e-19  Score=139.90  Aligned_cols=195  Identities=15%  Similarity=0.225  Sum_probs=111.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+......+.++.+|++|++++.++++..     ++|+
T Consensus        15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-----KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865521111     112222357889999999999888877642     7999


Q ss_pred             EEEcCCCCc----------c-------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREA----------D-------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~----------~-------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +||+||...          .             +    ++.++..++  +..++|++||...|..             ..
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~  156 (253)
T 3qiv_A           90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY-------------SN  156 (253)
T ss_dssp             EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred             EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC-------------Cc
Confidence            999998621          0             1    223333443  5678999999887521             11


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .|..+|...+.+.+       ..+++++.++||.++++.........+.....+.         .....+.+++|+++++
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKG---------LPLSRMGTPDDLVGMC  227 (253)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhcc---------CCCCCCCCHHHHHHHH
Confidence            23489998888763       2479999999999998753221111111111111         1223455689999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCccC
Q 024575          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +.++....  ..|+.|++.+|..++
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC-------
T ss_pred             HHHcCccccCCCCCEEEECCCeecC
Confidence            99986543  368999999987653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.78  E-value=1.6e-18  Score=136.88  Aligned_cols=189  Identities=13%  Similarity=0.082  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+..+..+.+        .  ..++.++.+|++|++++.++++.     .++|+
T Consensus        33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL--------R--QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHH--------H--HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------H--hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999999876532111        1  23588999999999988887764     27999


Q ss_pred             EEEcCCCCcc-------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                   +..+++++    ++  +..++|++||...+..           ..+...| 
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  171 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------SSKHIAYC  171 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------CSSCHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------CCCcHhHH
Confidence            9999996321                   12223333    22  4578999999876421           1123345 


Q ss_pred             cchhhHHHHHh----h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       130 ~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      .+|...+.+.+    +  .+++++.++||.+..+....   ...........++         .-+..++|+|++++.++
T Consensus       172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            89999888763    1  35999999999988763210   1111111111111         12445899999999999


Q ss_pred             cCccccCceEEecCCCccC
Q 024575          204 GNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s  222 (265)
                      +.+...|+.+++.+|..++
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HCSSCCSCEEEESTTTTTC
T ss_pred             hCCCCCCCEEEECCCcccC
Confidence            7766679999999987765

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.78  E-value=2.6e-18  Score=137.24  Aligned_cols=211  Identities=15%  Similarity=0.129  Sum_probs=136.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh-------hHHhhhhccceEEEecCCChHHHHHHhhcc--
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--   71 (265)
                      |||+|+||++++++|+++|++|++++|++............       ..+.....++.++.+|++|++++.++++..  
T Consensus        16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (281)
T 3s55_A           16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED   95 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999986542111111111       111222357889999999999888877642  


Q ss_pred             ---CccEEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCC
Q 024575           72 ---GFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        72 ---~~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                         ++|++||+||....                    +..+++++    +.  +..++|++||...+..           
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  164 (281)
T 3s55_A           96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA-----------  164 (281)
T ss_dssp             HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC-----------
Confidence               79999999996321                    22333443    33  5679999999876521           


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHH-HHHHHHcCCc----ccCCCCCCceeee
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-FFHRLKAGRP----IPIPGSGIQVTQL  189 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~  189 (265)
                      ..+...| .+|..++.+.+       ..+++++.++||.+++|......... +.........    ..+.........+
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence            1123334 89998888763       35899999999999998643221100 0000000000    0000001122467


Q ss_pred             eeHHHHHHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      .+++|+|++++.++....  ..|+.+++.+|..++
T Consensus       245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            889999999999987653  358899999987654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.78  E-value=2.1e-19  Score=142.37  Aligned_cols=205  Identities=15%  Similarity=0.130  Sum_probs=127.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhH--HhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQE--FAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||+++++.|+++|++|++++|++..............  ......++.++.+|++|.+++.++++..     ++
T Consensus        13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (264)
T 2pd6_A           13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRP   92 (264)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998654211110000000  0000146889999999999888877632     34


Q ss_pred             -cEEEEcCCCCcc--------------------chHHHHHhCC------C-CCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 -DVVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 -d~vi~~a~~~~~--------------------~~~~l~~~~~------~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                       |+|||+||....                    ++.++++++.      + ..++|++||...+..           ..+
T Consensus        93 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  161 (264)
T 2pd6_A           93 PSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-----------NVG  161 (264)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC-----------CTT
T ss_pred             CeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC-----------CCC
Confidence             999999986421                    1233444422      3 578999999865421           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...| .+|..++.+.+       ..+++++++|||.++++.... ....+........         ....+.+++|+|+
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~  231 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPEDVAD  231 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHHHHHH
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHHHHHH
Confidence            3345 89998887753       368999999999999985321 1111111111110         1124678999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccCHHHH
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGL  226 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~el  226 (265)
                      +++.++..+.  ..|+.+++.++..++....
T Consensus       232 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          232 VVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            9999987542  4588999999877665443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.78  E-value=1.2e-18  Score=137.91  Aligned_cols=198  Identities=14%  Similarity=0.159  Sum_probs=132.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||+++++.|+++|++|++++|++.+.....     ..+... ..++.++.+|++|++++.++++..     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (263)
T 3ai3_A           13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD   87 (263)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     111111 246888999999999888877642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++++    ++  +..++|++||...+...           .+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (263)
T 3ai3_A           88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WYEPI  156 (263)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCcch
Confidence            99999986321                    12223333    33  56899999998875321           12233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch----------hHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      | .+|...+.+.+       ..++++++++||.+++|......          ...+....... ..       ....+.
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------p~~~~~  228 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE-HA-------PIKRFA  228 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH-HC-------TTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc-CC-------CCCCCc
Confidence            4 89999888763       36899999999999987311000          00011111110 00       113578


Q ss_pred             eHHHHHHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +++|+|++++.++..+.  ..|+.|++.++..++
T Consensus       229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          229 SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            89999999999987643  358899999987654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.77  E-value=2.6e-18  Score=135.33  Aligned_cols=197  Identities=17%  Similarity=0.220  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++....       ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A           10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA-------LAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHH-------HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865210       0111111246788999999999988877632     7999


Q ss_pred             EEEcCCCCcc------------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                        .++.++..++  +..++|++||...+..           ..+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  151 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG-----------STGKAAY  151 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC-----------CCCchhH
Confidence            9999986321                        1233444444  5689999999876521           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHH-HHHcCC-c----ccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGR-P----IPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~-~~~~~~-~----~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|...+.+.+       ..++++++++||.+++|..     ..... ....+. .    ..+.........+++++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  226 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV-----QKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHL  226 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH-----HHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch-----hhhcccccccccchHHHHHHHHhccCCCCCCcCHHHH
Confidence             89998888763       3589999999999988731     11110 000000 0    0000111122357899999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      |++++.++..+.  ..|+.|++.++..
T Consensus       227 A~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          227 GELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            999999887543  3588999998754

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.77  E-value=2.5e-18  Score=135.32  Aligned_cols=193  Identities=14%  Similarity=0.190  Sum_probs=130.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEecCCChHHHHHHhhc----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++++....        ..+...++ .++.+|++|.+++.++++.    .++|+
T Consensus        17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRA--------AQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            79999999999999999999999999986542110        11112355 8899999999988887753    37999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.+++.++  +..++|++||...+...         +..+...|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y  159 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFASSY  159 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCBHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcchHH
Confidence            9999986321                    1    222333333  67899999998765321         11222345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...|.+.+       ..+++++++|||.++++...... ...+........+         ...+.+++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence             89999988763       24899999999999987311000 0111222222211         124678999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++..+.  ..|+.+++.++.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCcccccccCCEEEECCCE
Confidence            9986542  358899998874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.77  E-value=3.4e-18  Score=134.49  Aligned_cols=192  Identities=16%  Similarity=0.167  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++.... +       ..+...++.++.+|++|++++.++++..     .+|+
T Consensus        12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~-------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A           12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-L-------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-H-------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999997654211 0       1111246889999999999888777632     5899


Q ss_pred             EEEcCCCCcc------------------------chHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                        .++.++..++ ...++|++||...+..           ..+...| 
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  152 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-----------IEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC-----------CTTBHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCC-----------CCCCccHH
Confidence            9999996421                        1233445554 2289999999876521           1123334 


Q ss_pred             cchhhHHHHHhh-------c--CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcc-c-CCC--CCCceeeeeeHHHHH
Q 024575          130 KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-P-IPG--SGIQVTQLGHVKDLA  196 (265)
Q Consensus       130 ~~k~~~E~~~~~-------~--~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~i~~~D~a  196 (265)
                      .+|...+.+.+.       .  +++++++|||.+++|..         ......... . +..  .......+.+++|+|
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~---------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  223 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM---------QASLPKGVSKEMVLHDPKLNRAGRAYMPERIA  223 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH---------HHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh---------hhccchhhhHHHHhhhhccCccCCCCCHHHHH
Confidence            899998887632       3  89999999999998731         010000000 0 000  001113478999999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++++.++..+.  ..|+.+++.++..
T Consensus       224 ~~~~~l~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          224 QLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             HHHHHHcCccccCCCCcEEEECCCcc
Confidence            99999987643  3588999988753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.77  E-value=1.7e-18  Score=136.50  Aligned_cols=198  Identities=15%  Similarity=0.126  Sum_probs=134.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-----AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865421110     112222357889999999999888777642     7999


Q ss_pred             EEEcCCCCcc-------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                   +..+++++    ++  +..++|++||...+.           +..+...| 
T Consensus        93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~  161 (256)
T 3gaf_A           93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-----------TNVRMASYG  161 (256)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC-----------CCTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC-----------CCCCchHHH
Confidence            9999986421                   12233333    32  557999999987642           11223335 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..+++++.++||.+.++..................+         ...+.+++|+|++++.+
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTP---------LGRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHH
Confidence            99999888763       358999999999998763110001112222222211         12466799999999999


Q ss_pred             hcCcc--ccCceEEecCCCccCH
Q 024575          203 LGNEK--ASRQVFNISGEKYVTF  223 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~s~  223 (265)
                      +....  ..|+.+++.+|...++
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCC-
T ss_pred             cCCcccCccCCEEEECCCccccC
Confidence            86543  3689999999877654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.77  E-value=7.7e-19  Score=138.58  Aligned_cols=194  Identities=19%  Similarity=0.221  Sum_probs=131.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcC-CCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+ +... ..+.    ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B           13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANI-DETI----ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH-HHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEECCCchhhH-HHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999998 4431 1110    111111246889999999999988877642     799


Q ss_pred             EEEEcCCC-Ccc--------------------chHHHHH----hCC--C--C---CcEEEEecceeeecCCCCCCCCCCC
Q 024575           75 VVYDINGR-EAD--------------------EVEPILD----ALP--N--L---EQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        75 ~vi~~a~~-~~~--------------------~~~~l~~----~~~--~--~---~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                      +|||+||. ...                    ++.++++    .+.  +  .   .++|++||...+..          +
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~  157 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----------G  157 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------C
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------C
Confidence            99999986 211                    1122222    222  2  2   78999999876531          1


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      ..+...| .+|...|.+.+       ..+++++++|||.++++.... ....+......+.+         ...+++++|
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~d  227 (258)
T 3afn_B          158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-KTQDVRDRISNGIP---------MGRFGTAEE  227 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-CCHHHHHHHHTTCT---------TCSCBCGGG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-cCHHHHHHHhccCC---------CCcCCCHHH
Confidence            1123345 89999988763       248999999999999985322 12223333332221         135788999


Q ss_pred             HHHHHHHHhcCcc---ccCceEEecCCC
Q 024575          195 LARAFVQVLGNEK---ASRQVFNISGEK  219 (265)
Q Consensus       195 ~a~~~~~~~~~~~---~~~~~~~i~~~~  219 (265)
                      +|++++.++.++.   ..|+.|++.++.
T Consensus       228 va~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          228 MAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHhCcchhccccCCEEeECCCc
Confidence            9999999987542   358899999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.77  E-value=4.4e-18  Score=135.01  Aligned_cols=194  Identities=19%  Similarity=0.195  Sum_probs=132.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.|+.....+.+.    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVV----AAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999986543221111    112222357889999999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  +..++|++||...+..           ......|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  178 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG-----------NPGQANY  178 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------CCCchhH
Confidence            9999997421                    12233333    22  5679999999776421           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++.....    .........++         ..+.+.+|+|++++.
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~p~---------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----AAEKLLEVIPL---------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----HHHHHGGGCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----cHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             89998887652       4689999999999988753211    11122221111         235678999999999


Q ss_pred             HhcCcc---ccCceEEecCCCccC
Q 024575          202 VLGNEK---ASRQVFNISGEKYVT  222 (265)
Q Consensus       202 ~~~~~~---~~~~~~~i~~~~~~s  222 (265)
                      ++.++.   ..|+.+++.+|..++
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             HhCCcccCCCcCCEEEECCCeecC
Confidence            998742   358999999987653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.77  E-value=1.3e-19  Score=138.24  Aligned_cols=165  Identities=21%  Similarity=0.154  Sum_probs=120.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-cCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~d~vi~~   79 (265)
                      |||+|++|++++++|+++  +|++++|++..... +       ... ... .++.+|++|++++.++++. .++|+|||+
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~-~-------~~~-~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAE-L-------ARE-VGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHH-H-------HHH-HTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHH-H-------HHh-ccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999998  99999997644211 0       001 112 7889999999999888863 279999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHH
Q 024575           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (265)
                      +|....                    ++.++++++.  +..+||++||...|..           ..+...| .+|..+|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-----------VPGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS-----------STTBHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC-----------CCCcchHHHHHHHHH
Confidence            986321                    2446777776  5689999999887632           1233345 8999998


Q ss_pred             HHHhh-------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       137 ~~~~~-------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      .+++.       .+++++++|||.++++..             .       +.+.....+++++|+|++++.+++++..
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW-------------A-------PLGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG-------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc-------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            87642       589999999999998730             0       1112235789999999999999987653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=1e-18  Score=137.71  Aligned_cols=196  Identities=13%  Similarity=0.076  Sum_probs=129.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++. ....        ... .. .++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~--------~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A           12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA--------EAI-GG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH--------HHH-TC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH--------HHh-hC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654 2110        111 14 78999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    ++  +..++|++||...+..           ..+...|
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  149 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------EQENAAY  149 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----------CCCChhH
Confidence            9999986321                    12233333    32  5689999999875421           1123335


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHH-cCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+.+       ..++++++++||.+.++.     ....+.... ................+.+++|+|++++
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~  224 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             89999888763       358999999999987652     111100000 0110000011112245789999999999


Q ss_pred             HHhcCcc--ccCceEEecCCCccCH
Q 024575          201 QVLGNEK--ASRQVFNISGEKYVTF  223 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s~  223 (265)
                      .++..+.  ..|+.+++.++..+++
T Consensus       225 ~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHhCchhcCCCCCEEEECCCccccc
Confidence            9987652  3688999999876554

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.77  E-value=1.1e-18  Score=138.23  Aligned_cols=193  Identities=15%  Similarity=0.155  Sum_probs=129.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.......        ..+..++.++.+|++|++++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV--------AGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110        111136788999999999888877632     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..+++++    +.  + ..++|++||...+..           ..+...
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----------APLLAH  158 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----------CCCchh
Confidence            9999986321                    12233333    22  3 589999999876421           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-----h-----HHHHHHHHcCCcccCCCCCCceeeee
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      | .+|...+.+.+       ..++++++++||.++++......     .     ...........         ....+.
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~  229 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT---------PLGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---------CCCCCc
Confidence            4 89998887763       35899999999999887311000     0     00111111111         113478


Q ss_pred             eHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +++|+|++++.++..+.  ..|+.+++.++..+
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            89999999999987642  36889999988643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.2e-17  Score=131.71  Aligned_cols=194  Identities=12%  Similarity=0.160  Sum_probs=126.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+.......+        ...++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A           13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999988763322221        1357899999999999888877642     7999


Q ss_pred             EEEcCCCCcc------------------------chHHHHHh----CC--------CCCcEEEEecceeeecCCCCCCCC
Q 024575           76 VYDINGREAD------------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPHCE  119 (265)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~~----~~--------~~~~~v~~Ss~~~~~~~~~~~~~e  119 (265)
                      +||+||....                        +..+++++    ++        +..++|++||...+...       
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-------  157 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-------  157 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-------
Confidence            9999996421                        12223332    22        23579999998765321       


Q ss_pred             CCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       120 ~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                          .+...| .+|...+.+.+       ..+++++.++||.+.++.... ............  .+.      ...+.+
T Consensus       158 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~--~p~------~~r~~~  224 (257)
T 3tpc_A          158 ----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAAS--VPF------PPRLGR  224 (257)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CC--SSS------SCSCBC
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHhc--CCC------CCCCCC
Confidence                122334 89988887752       368999999999998874211 111111111111  111      034678


Q ss_pred             HHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      .+|+|++++.++++....|+.+++.+|..++
T Consensus       225 ~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          225 AEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            9999999999998766678999999987654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=3.1e-18  Score=134.17  Aligned_cols=190  Identities=14%  Similarity=0.122  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||++++++|+++|++|++++|++.+..... +         ..++.++.+|++|++++.++++.. ++|++||+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A           12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---------ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            899999999999999999999999999865422111 1         136888999999999988776543 79999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cch
Q 024575           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k  132 (265)
                      ||....                    +..+++++    ++  +..++|++||...+...          ..+...| .+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~~sK  151 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTK  151 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCCCccHHHHH
Confidence            996421                    12223333    32  56899999998754211          1123334 899


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCch-----hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ...+.+.+       ..+++++++|||.+++|.....+     ............  +       ...+.+.+|+|++++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dvA~~v~  222 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ--K-------TGRFATAEEIAMLCV  222 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC--T-------TSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC--C-------CCCCCCHHHHHHHHH
Confidence            99888763       34899999999999987311000     001111111111  1       123678999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++..+.  ..|+.+++.++.
T Consensus       223 ~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          223 YLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhCccccCCCCCEEEECCCc
Confidence            9986543  358899998874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.76  E-value=4.3e-18  Score=134.82  Aligned_cols=199  Identities=14%  Similarity=0.186  Sum_probs=132.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ........++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A           13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMK----ETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999888654322111    111122357899999999999988877643     7999


Q ss_pred             EEEcCCCC----------------------ccchHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGRE----------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~----------------------~~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||..                      ..+..++++++    +  +..++|++||...++..         +..+..
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~~~~  159 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------GWIYRS  159 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------CCTTCH
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------CCCCCc
Confidence            99999931                      11233344443    3  66899999987543211         112233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+.+       ..++++++++||.++++..... ...........         .....+.+.+|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------~p~~r~~~~~dva~~v  229 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHN---------TPIGRSGTGEDIARTI  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhc---------CCCCCCcCHHHHHHHH
Confidence            45 89998887753       3689999999999998753222 22111111111         1123466799999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCccC
Q 024575          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +.++..+.  ..|+.+++.+|....
T Consensus       230 ~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          230 SFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHcCcccCCCCCcEEEEcCceeec
Confidence            99987643  368999999886543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.76  E-value=4.8e-18  Score=134.15  Aligned_cols=187  Identities=16%  Similarity=0.155  Sum_probs=130.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++++....        ..+....+.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110        0111235788999999999888877632     7999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +.    +.++..++  +..++|++||...+..           ..+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  153 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----------TVACHGY  153 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC-----------CCCchhH
Confidence            9999986321                    11    33444444  5789999999876521           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++++|||.++++...  +         ....+.    ......+.+++|+|++++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~----~~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF----QTALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS----CCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH----hCccCCCCCHHHHHHHHHH
Confidence             89999888763       36899999999999987421  0         001110    0112346789999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++..+.  ..|+.+++.++...
T Consensus       219 l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCcCCEEEECCCeec
Confidence            986543  35889999988643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.76  E-value=1.3e-17  Score=130.83  Aligned_cols=191  Identities=15%  Similarity=0.134  Sum_probs=128.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||+++++.|+++|++|++++|+......        ........+.++.+|+++.+++.++++.. ++|++||+
T Consensus        20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS--------LGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH--------HHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            8999999999999999999999999997654211        11122357889999999999999888754 69999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cch
Q 024575           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (265)
Q Consensus        80 a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k  132 (265)
                      ||....                    +..+++++    +.  +..++|++||...+..           ..+...| .+|
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK  160 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG-----------NPGQANYCASK  160 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C-----------CSCSHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC-----------CCCCchhHHHH
Confidence            996321                    12233333    22  5679999999876532           1123335 899


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      ...+.+.+       ..++++++++||.+.++.... +............         ....+.+++|+|++++.++.+
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~  230 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKI---------PLGTYGIPEDVAYAVAFLASN  230 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHC---------TTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCC
Confidence            98887753       368999999999998874221 1122222222111         123466799999999999876


Q ss_pred             cc--ccCceEEecCCCc
Q 024575          206 EK--ASRQVFNISGEKY  220 (265)
Q Consensus       206 ~~--~~~~~~~i~~~~~  220 (265)
                      +.  ..|+.+++.+|..
T Consensus       231 ~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          231 NASYITGQTLHVNGGML  247 (249)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             ccCCccCcEEEECCCEe
Confidence            43  3588999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.76  E-value=6.7e-18  Score=135.44  Aligned_cols=196  Identities=17%  Similarity=0.194  Sum_probs=133.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+........     ..+.... .++.++.+|++|++++.++++..     ++|
T Consensus        47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  121 (293)
T 3rih_A           47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT-----AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD  121 (293)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999876532111     1111111 47889999999999888777642     789


Q ss_pred             EEEEcCCCCc--------------------cchHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||...                    .+..++++++    +  +..++|++||...+.          ....+...
T Consensus       122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~~~~~  191 (293)
T 3rih_A          122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYPGWSH  191 (293)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCCCCHH
Confidence            9999999632                    1233455554    2  568999999976420          01112334


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..++++++++||.++++... .....+........++.         -+...+|+|++++
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV-DMGEEYISGMARSIPMG---------MLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-HTCHHHHHHHHTTSTTS---------SCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh-hccHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence            5 89998888763       36899999999999987311 11122233333332222         2345899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCcc
Q 024575          201 QVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++....  ..|+.+++.+|..+
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            9886543  46889999988754

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.76  E-value=3e-18  Score=135.65  Aligned_cols=183  Identities=17%  Similarity=0.159  Sum_probs=126.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++..                ..++.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                156788999999999888777632     6999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------TKNASAY  146 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------CCCchhH
Confidence            9999986321                    1    222333343  5679999999876421           1223345


Q ss_pred             -cchhhHHHHHhh----cC--CceeEeecceeeCCCCCCchh-------H----HHHHHHHcCCcccCCCCCCceeeeee
Q 024575          130 -KGKLNTESVLES----KG--VNWTSLRPVYIYGPLNYNPVE-------E----WFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       130 -~~k~~~E~~~~~----~~--~~~~i~r~~~i~g~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                       .+|...+.+.+.    .+  +++++++||.+.++... ...       .    .........  .       ....+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~~~~~  216 (264)
T 2dtx_A          147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR-KAAELEVGSDPMRIEKKISEWGHE--H-------PMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH-HHHHHHHCSCHHHHHHHHHHHHHH--S-------TTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh-hhhhcccccCchhhHHHHHHHHhc--C-------CCCCCcC
Confidence             899998887632    12  89999999998775210 000       0    000111100  0       1124788


Q ss_pred             HHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++|+|++++.++..+.  ..|+.+++.++..
T Consensus       217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          217 PQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            9999999999987543  3688999988753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.76  E-value=2.4e-18  Score=138.05  Aligned_cols=197  Identities=20%  Similarity=0.237  Sum_probs=132.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.........    ........++.++.+|++|++++.++++..     ++|+
T Consensus        53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754221110    111122357889999999999888777642     7999


Q ss_pred             EEEcCCCCcc---------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                     +..+++++    ++...++|++||...+...           .+...| 
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  197 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN-----------ETLIDYS  197 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----------TTCHHHH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----------CCChhHH
Confidence            9999986311                     12234444    3345689999998876321           112334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..+++++.++||.++++.....+........         ........+.+.+|+|++++.+
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHH
Confidence            89999888763       3589999999999998731000001111111         1112223566799999999999


Q ss_pred             hcCcc--ccCceEEecCCCcc
Q 024575          203 LGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +....  ..|+.+++.+|..+
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            86543  46889999988654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.76  E-value=5e-18  Score=133.61  Aligned_cols=192  Identities=16%  Similarity=0.146  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++......        .++..++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A           11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--------RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421111        111246888999999999888777632     7999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  151 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------LALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------CCCchhH
Confidence            9999986321                    1    124455554  5789999999876421           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeee-eHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~  200 (265)
                       .+|...+.+.+       ..++++++++||.++++.     .    .... ...............+. +.+|+|++++
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~----~~~~-~~~~~~~~~~~p~~~~~~~~~dvA~~v~  221 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----T----AETG-IRQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----H----HHHT-CCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-----c----cccc-hhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence             89998887753       358999999999998862     1    1111 11000001111112356 8999999999


Q ss_pred             HHhcCcc--ccCceEEecCCCcc
Q 024575          201 QVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++..+.  ..|+.+++.++...
T Consensus       222 ~l~s~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          222 KLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHhCchhcCCCCCEEEECCCccc
Confidence            9987642  36889999987543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.76  E-value=2e-17  Score=129.92  Aligned_cols=193  Identities=13%  Similarity=0.046  Sum_probs=121.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++.     .          ..++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X           13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E----------QYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S----------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h----------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998653     1          123788999999999988877632     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..++++++    +  +..++|++||...+.           +..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  146 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------PRIGMSAY  146 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCCCchH
Confidence            9999986321                    122344433    3  578999999987642           11223335


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HHHH-HHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                       .+|...+.+.+       ..++++++++||.++++........ .... .....  ............+.+.+|+|+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF--GEQFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhh--hhcccccCCCCCCcCHHHHHHHH
Confidence             89999888763       3589999999999998752111000 0000 00000  00000001122467899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCcc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +.++..+.  ..|+.+.+.++..+
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          225 LFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhCccccCCCCCEEEECCCccc
Confidence            99987643  46889999987543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.76  E-value=4.1e-18  Score=133.59  Aligned_cols=192  Identities=16%  Similarity=0.190  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEE-cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++ |++.. .....    ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~-~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A           11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTS-LDATA----EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSH-HHHHH----HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHH-HHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            79999999999999999999999994 44433 11110    111111346889999999999888877642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHH----HhCC--CCCcEEEEeccee-eecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~----~~~~--~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~  127 (265)
                      +|||+||....                    +..+++    ..++  +..++|++||... ++.            .+..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~  153 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------AGQA  153 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------CCCc
Confidence            99999986321                    122223    3333  5689999999753 321            1123


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...|.+.+       ..++++++++||.+.++... .+............+         ...+++++|+|+++
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  223 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD-VLPDKVKEMYLNNIP---------LKRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-TSCHHHHHHHHTTST---------TSSCBCHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh-hcchHHHHHHHhhCC---------CCCCCCHHHHHHHH
Confidence            34 89998888763       34899999999998775210 011111222222111         12467899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +.++..+.  ..|+.|++.++.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            99887542  357899999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.76  E-value=8.9e-18  Score=132.75  Aligned_cols=196  Identities=16%  Similarity=0.137  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEc-CCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++| +++. ...+.    ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A           13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE-ANSVL----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEcCCChHH-HHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999 4332 11110    111111246888999999999888777642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHH----hCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPILD----ALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~----~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +|||+||....                    +..++++    .+.  + ..++|++||...+.           +..+..
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  156 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWPLFV  156 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCCCcc
Confidence            99999986321                    1222333    332  3 57999999976531           222333


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      .| .+|...+.+.+       ..+++++++|||.++++...... ...........  .+       ...+.+++|+|++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~  227 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM--IP-------MGYIGEPEEIAAV  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT--CT-------TSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc--CC-------CCCCcCHHHHHHH
Confidence            45 89988887653       35899999999999987421100 01111111111  11       1246789999999


Q ss_pred             HHHHhcCc--cccCceEEecCCCcc
Q 024575          199 FVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      ++.++...  ...|+.+++.++..+
T Consensus       228 ~~~l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          228 AAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCccccCCCCcEEEEcCCccc
Confidence            99998653  235889999987643

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.75  E-value=4.3e-18  Score=135.88  Aligned_cols=205  Identities=18%  Similarity=0.205  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+.....+...    ..+... ...+.++.+|++|++++.++++..     ++|
T Consensus        31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999999999995433211110    111111 257889999999999888877642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++++    ++  +..++|++||...+..           ......
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  175 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA-----------SPFKSA  175 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC-----------CCCchH
Confidence            99999997321                    12334443    23  5678999999876421           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHH-HHHcCCc-ccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRP-IPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+       ..+++++.++||.+.++............ ....... ............+.+++|+|++
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            4 89998888753       35899999999999987522111100000 0000000 0111223334568899999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCc
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++.++....  ..|+.+++.+|..
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCcc
Confidence            999987653  4688999998753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.75  E-value=6.7e-19  Score=139.68  Aligned_cols=206  Identities=15%  Similarity=0.162  Sum_probs=134.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+...  ..++.++.+|++|++++.++++..     ++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (267)
T 2gdz_A           13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   87 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421100     000000  246889999999999988877632     68


Q ss_pred             cEEEEcCCCCcc----------------chHHHHHhCC--C---CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cc
Q 024575           74 DVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (265)
Q Consensus        74 d~vi~~a~~~~~----------------~~~~l~~~~~--~---~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~  131 (265)
                      |++||+||....                .++.+++.++  +   ..++|++||...+...           .+...| .+
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~s  156 (267)
T 2gdz_A           88 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQPVYCAS  156 (267)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTCHHHHHH
T ss_pred             CEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCCchHHHH
Confidence            999999996421                1334555554  2   5789999998765321           112234 88


Q ss_pred             hhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcc-cCCCCCCceeeeeeHHHHHHHHHH
Q 024575          132 KLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       132 k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      |..++.+.+         ..++++++++||.+.++.... ....  ......... ...........+++++|+|++++.
T Consensus       157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~  233 (267)
T 2gdz_A          157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE--ENMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH--HHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc--cccchhhhHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            988877653         358999999999987762100 0000  000000000 000000011346789999999999


Q ss_pred             HhcCccccCceEEecCCCccCHHH
Q 024575          202 VLGNEKASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~e  225 (265)
                      ++.++...|+.+++.+++.+++.|
T Consensus       234 l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          234 LIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HhcCcCCCCcEEEecCCCcccccC
Confidence            998766678999999988776654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.75  E-value=1.5e-17  Score=130.44  Aligned_cols=195  Identities=16%  Similarity=0.172  Sum_probs=133.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKF-----ENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986552111     0111222357899999999999888877642     6899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  +..++|++||...+..           ..+...|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  154 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG-----------NPGQTNY  154 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------CCCcHHH
Confidence            9999997421                    12233333    22  5569999999876522           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+.++.... +............         ....+.+++|+|++++.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKI---------PSGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTS---------TTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcC---------CCCCCcCHHHHHHHHHH
Confidence             89998877753       468999999999998875322 1222222222111         12356789999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++....  ..|+.+++.+|..+
T Consensus       225 l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          225 LASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCCEEEECCCEec
Confidence            986543  36899999988654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.75  E-value=5.5e-17  Score=129.39  Aligned_cols=212  Identities=14%  Similarity=0.133  Sum_probs=137.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh-------hHHhhhhccceEEEecCCChHHHHHHhhcc--
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--   71 (265)
                      |||+|+||++++++|+++|++|++++|+.............       ..+.....++.++.+|++|++++.++++..  
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   98 (278)
T 3sx2_A           19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD   98 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985421111110000       111222357899999999999988877642  


Q ss_pred             ---CccEEEEcCCCCcc----------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           72 ---GFDVVYDINGREAD----------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        72 ---~~d~vi~~a~~~~~----------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                         ++|++||+||....                +..+++++    +.   ...++|++||...+....       .+..+
T Consensus        99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~~~~  171 (278)
T 3sx2_A           99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-------SADPG  171 (278)
T ss_dssp             HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-------CSSHH
T ss_pred             HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-------cCCCC
Confidence               79999999997421                22233333    22   256899999987642110       01112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHH-HHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..+++++.++||.+.++............ ............+... ..+.+++|+|
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA  250 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence            2335 89998888763       35799999999999998644332222222 1222221222222223 5788999999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++++++....  ..|+.+++.+|..
T Consensus       251 ~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          251 NAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhCcccccccCCEEeECCCcc
Confidence            99999986543  4688999998754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.75  E-value=1.3e-17  Score=131.88  Aligned_cols=196  Identities=18%  Similarity=0.207  Sum_probs=132.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+.++.....     ..+.... .++.++.+|++|++++.++++..     ++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   90 (262)
T 3pk0_A           16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV-----ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID   90 (262)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999999865521110     0111111 47889999999999888777642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHH----HhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~----~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++    ..++  +..++|++||.....          .+..+...
T Consensus        91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~~~~~  160 (262)
T 3pk0_A           91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYPGWSH  160 (262)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCCCChh
Confidence            99999996321                    122233    3333  567999999976420          01112333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..+++++.++||.++++.... ....+........+.         ..+.+.+|+|++++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 99999988763       368999999999998873211 111222222222222         13556899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCcc
Q 024575          201 QVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++....  ..|+.+++.+|..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            9886543  46889999988654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.75  E-value=5.3e-18  Score=135.93  Aligned_cols=222  Identities=16%  Similarity=0.130  Sum_probs=137.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChh-------HHhhhhccceEEEecCCChHHHHHHhhcc--
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--   71 (265)
                      |||+|+||++++++|+++|++|++++|+..............       .+.....++.++.+|++|.+++.++++..  
T Consensus        16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   95 (287)
T 3pxx_A           16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA   95 (287)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            799999999999999999999999999854422211111111       11222357889999999999888777642  


Q ss_pred             ---CccEEEEcCCCCcc------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           72 ---GFDVVYDINGREAD------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        72 ---~~d~vi~~a~~~~~------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                         ++|++||+||....                  +..+++++    +++..++|++||...+......+..+..+..+.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  175 (287)
T 3pxx_A           96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG  175 (287)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred             HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence               79999999996321                  12334444    234568999999877643322222222222223


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCc-----ccCCCCCCceeeeeeHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-----IPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~  193 (265)
                      ..| .+|...+.+.+       ..+++++.++||.+.++..........+........     ............+.+++
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  255 (287)
T 3pxx_A          176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEAS  255 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHH
Confidence            335 89999888763       358999999999999885322111000000000000     00000011124678899


Q ss_pred             HHHHHHHHHhcCc--cccCceEEecCCCccC
Q 024575          194 DLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      |+|++++.++...  ...|+.+++.+|..++
T Consensus       256 dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          256 DISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            9999999998654  3468899999986543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.75  E-value=6e-18  Score=134.65  Aligned_cols=195  Identities=18%  Similarity=0.162  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.......+.    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~  102 (274)
T 1ja9_A           27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF  102 (274)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999994322111110    111111346889999999999888877632     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CCCCCcEEEEecceee-ecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~~~~~~v~~Ss~~~~-~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      |||+||....                    ++.+++++    ++...++|++||...+ ..           ..+...| 
T Consensus       103 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~~Y~  171 (274)
T 1ja9_A          103 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG-----------IPNHALYA  171 (274)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-----------CCSCHHHH
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC-----------CCCCchHH
Confidence            9999986421                    12233333    3322699999998775 21           1122334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-----------chh-HHHHHHHHcCCcccCCCCCCceeeee
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      .+|..+|.+++       ..++++++++||.++++....           ... ..........         .....++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  242 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM---------NPLKRIG  242 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT---------STTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc---------CCCCCcc
Confidence            89999998764       248999999999998763110           000 1111111111         1223578


Q ss_pred             eHHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++|+|++++.++.++.  ..|+.|++++|.
T Consensus       243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          243 YPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            99999999999987643  258899998864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.75  E-value=9.1e-18  Score=131.64  Aligned_cols=193  Identities=15%  Similarity=0.188  Sum_probs=129.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|++|++++++|+++|++|++++|++..... +.    ..+.. ...++.++.+|++|++++.++++..     ++|
T Consensus        13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   87 (248)
T 2pnf_A           13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKA-VA----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID   87 (248)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHH-HH----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            8999999999999999999999999997654211 00    01111 1246888999999999988877632     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|||+||....                    ++.+++++    ++  +..++|++||...+...           .+...
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  156 (248)
T 2pnf_A           88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VGQVN  156 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CCCch
Confidence            99999986421                    12223333    32  56899999997653211           11223


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..++++++++||.++++... .+...+........+         ...+++++|+|++++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA-VLSEEIKQKYKEQIP---------LGRFGSPEEVANVVL  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-GSCHHHHHHHHHTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh-hccHHHHHHHHhcCC---------CCCccCHHHHHHHHH
Confidence            4 88998887763       35899999999999987421 111112222211111         124778999999999


Q ss_pred             HHhcCc--cccCceEEecCCC
Q 024575          201 QVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (265)
                      .++...  ...|+.|++.++.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            998753  2358899998863

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.75  E-value=4.2e-18  Score=134.54  Aligned_cols=197  Identities=13%  Similarity=0.133  Sum_probs=132.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-----ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865421110     111111246888999999999887776532     7999


Q ss_pred             EEEcCCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||...                     .+..+++++    ++  +..++|++||...+..           ..+...
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  163 (260)
T 2zat_A           95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-----------FPNLGP  163 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----------CCCchh
Confidence            999998632                     012223333    33  5689999999887531           122334


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.+       ..++++++++||.+.++.....+. ..........  .       ....+.+++|+|+++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~v  234 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES--L-------RIRRLGNPEDCAGIV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH--H-------TCSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc--C-------CCCCCCCHHHHHHHH
Confidence            5 89999888763       348999999999998874211000 0000011000  1       112467899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCccC
Q 024575          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +.++..+.  ..|+.+++.+|..++
T Consensus       235 ~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          235 SFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHcCcccCCccCCEEEECCCcccc
Confidence            99987643  368899999987765

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.75  E-value=1.5e-17  Score=132.35  Aligned_cols=195  Identities=14%  Similarity=0.130  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.....++.++.+|++|++++.++++.      .++|
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            799999999999999999999999999865421110     11111134688999999999988877742      3799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++++    ++  +..++|++||...+..           ..+...
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  170 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-----------LPSVSL  170 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC-----------CCCcch
Confidence            99999986321                    12233333    22  5689999999887532           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh-----HHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      | .+|...+.+.+       ..++++++++||.++++.......     ...........++         ..+.+++|+
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dv  241 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEV  241 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            4 89999888763       358999999999999885221100     1111111111111         136679999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      |++++.++....  ..|+.+++.+|..
T Consensus       242 A~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          242 SALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCccccCcCCCEEEECCCcc
Confidence            999999886542  3588999998754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.75  E-value=2.4e-17  Score=131.23  Aligned_cols=194  Identities=15%  Similarity=0.191  Sum_probs=131.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+.....        ..+...++.++.+|++|++++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV--------ANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111        1112357889999999999888877643     7999


Q ss_pred             EEEcCCCCcc--------------------chH----HHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..    .++..++  +..++|++||...+.           +..+...|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  173 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-----------AIADRTAY  173 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-----------CCCCChhH
Confidence            9999996321                    122    2333334  457999999987642           12223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                       .+|...+.+.+       ..+++++.++||.+.++....     .............         .....+.+++|+|
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r~~~pedvA  244 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR---------AVMDRMGTAEEIA  244 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT---------STTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc---------CcccCCcCHHHHH
Confidence             89999888763       358999999999987762000     0000011111111         1123456799999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++++.++....  ..|+.+++.+|..++
T Consensus       245 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          245 EAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            99999987543  368899999987654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.75  E-value=1.4e-17  Score=132.88  Aligned_cols=206  Identities=15%  Similarity=0.091  Sum_probs=132.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCC-CCCCh-------hHHhhhhccceEEEecCCChHHHHHHhhcc-
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   71 (265)
                      |||+|+||++++++|+++|++|++++|+........ .....       ..+.....++.++.+|++|++++.++++.. 
T Consensus        21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (280)
T 3pgx_A           21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM  100 (280)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            799999999999999999999999999643211100 00000       111122357889999999999988877642 


Q ss_pred             ----CccEEEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCC
Q 024575           72 ----GFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (265)
Q Consensus        72 ----~~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~  120 (265)
                          ++|++||+||....                    +..+++++    +.  + ..++|++||...+.          
T Consensus       101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  170 (280)
T 3pgx_A          101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK----------  170 (280)
T ss_dssp             HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc----------
Confidence                79999999997421                    12233333    22  2 56899999987642          


Q ss_pred             CCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHc-CCcccCCCCCCceeeeee
Q 024575          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~  191 (265)
                       +......| .+|..++.+.+       ..+++++.++||.+++|................ ...+.. .. .....+.+
T Consensus       171 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~r~~~  247 (280)
T 3pgx_A          171 -ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MP-VQPNGFMT  247 (280)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BT-TBCSSCBC
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cc-cCCCCCCC
Confidence             11123345 89998888753       368999999999999985432111111111100 111111 11 11224889


Q ss_pred             HHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++|+|++++.++....  ..|+.+++.+|.
T Consensus       248 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          248 ADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999999986543  468899998874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.75  E-value=1.8e-17  Score=130.74  Aligned_cols=196  Identities=14%  Similarity=0.137  Sum_probs=131.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|+++ .|+.... ....    ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A           10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAA-LETA----EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHH----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999997 5654431 1110    111122357899999999999988877642     789


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++++    ++  +..++|++||...+.           +..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~~  153 (258)
T 3oid_A           85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR-----------YLENYTT  153 (258)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS-----------BCTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC-----------CCCCcHH
Confidence            99999986321                    12233333    23  557999999987642           1222334


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.+       ..+++++.++||.+.++...... ............++         ..+.+++|+|+++
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v  224 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMVEIKDMVDTV  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            5 89999888763       35899999999999887421111 11122222222211         2456799999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCcc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +.++....  ..|+.+++.+|...
T Consensus       225 ~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          225 EFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             HHHhCcccCCccCCEEEECCCccC
Confidence            99987643  46899999988654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.75  E-value=8.7e-18  Score=133.04  Aligned_cols=186  Identities=17%  Similarity=0.178  Sum_probs=128.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+....                .....+.+|++|.+++.++++.     .++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS----------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            89999999999999999999999999986652                1223458899999887776653     27999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..++++++    +  +..++|++||...+.           +..+...|
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  166 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------PGPGHALY  166 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------CCTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCChHH
Confidence            9999997421                    233344442    3  578999999987642           11223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc------hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                       .+|..++.+.+       ..++++++++||.+.++.....      ............         .....+.+++|+
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedv  237 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT---------VPLGRIAEPEDI  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT---------STTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc---------CCCCCCcCHHHH
Confidence             99999888763       3589999999999987631000      000011111111         122356789999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      |++++.++....  ..|+.+++.+|..++
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          238 ADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            999999987653  358899999987653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.74  E-value=1.8e-17  Score=130.05  Aligned_cols=193  Identities=13%  Similarity=0.157  Sum_probs=125.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCC-CccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|++ +....        .+.....++.++.+|++|++++.++++.     .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A           13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999987 33111        1112235688999999999988877653     2799


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +    ++.++..++  +..++|++||...+..           ..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  153 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------IEAYTH  153 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------CSSCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------CCCchh
Confidence            99999986321                    1    222333344  5689999999877531           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..++++++++||.+.++.......... ....  ..+.     .....+.+++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~--~~~~-----~~~~~~~~p~dva~~~~  225 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVL--PNML-----QAIPRLQVPLDLTGAAA  225 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT-----SSSCSCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHH--HHhh-----CccCCCCCHHHHHHHHH
Confidence            4 89999888763       358999999999998874210110000 0000  0010     01124678999999999


Q ss_pred             HHhcCc--cccCceEEecCCCc
Q 024575          201 QVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      .++..+  ...|+.+++.++..
T Consensus       226 ~l~s~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          226 FLASDDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             HHTSGGGTTCCSCEEEESSSCC
T ss_pred             HHcCcccCCCCCcEEEECCCcc
Confidence            998654  23688999988753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.74  E-value=1.4e-17  Score=130.54  Aligned_cols=193  Identities=16%  Similarity=0.225  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEc-CCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++| ++.. ...+.    ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A           10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQK-ANEVV----DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999 4332 11110    111111246888999999999888877642     799


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +    ++.++..++  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----------PGQAN  153 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----------CCCch
Confidence            99999996421                    1    223344443  56899999998764211           11233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..++++++++||.+.++.... .............+         ...+.+.+|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEMLKLIP---------AAQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHHHTCT---------TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            4 88988877652       468999999999998874221 11111111111111         123678999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++..+.  ..|+.+++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            9986543  358899998875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.74  E-value=7.7e-18  Score=133.30  Aligned_cols=196  Identities=17%  Similarity=0.187  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-----KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999865421110     112222357899999999999988877642     7999


Q ss_pred             EEEcCCCC-c--------------------cchHHHHHhC----C-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGRE-A--------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||.. .                    .+..++++++    + +..++|++||...+.           +..+...|
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  160 (264)
T 3ucx_A           92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH-----------SQAKYGAY  160 (264)
T ss_dssp             EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC-----------CCTTCHHH
T ss_pred             EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc-----------CCCccHHH
Confidence            99999763 1                    1123344443    2 236999999987642           11122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch----------hHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                       .+|...+.+.+       ..+++++.++||.++++.....+          ...+........         ....+.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  231 (264)
T 3ucx_A          161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS---------DLKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---------SSSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC---------CcccCCC
Confidence             89998888753       36899999999999887311000          011111111111         2234667


Q ss_pred             HHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++|+|++++.++....  ..|+.+++.+|..+
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            9999999999886543  46889999988643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.74  E-value=5.9e-17  Score=128.48  Aligned_cols=185  Identities=15%  Similarity=0.165  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+....               ...+..+.+|++|++++.++++..     ++|+
T Consensus        20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999987652               145678899999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    ++  +..++|++||...+..           ..+...|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  153 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-----------TKNAAAY  153 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------CCCChhH
Confidence            9999996321                    12223333    33  5679999999887532           1123344


Q ss_pred             -cchhhHHHHHh----h--cCCceeEeecceeeCCCCCC----------chhHHHHHHHHcCCcccCCCCCCceeeeeeH
Q 024575          130 -KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (265)
Q Consensus       130 -~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (265)
                       .+|..++.+.+    +  .+++++.++||.+.++....          ..............         ....+.++
T Consensus       154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p  224 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH---------PMGRIGRP  224 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS---------TTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC---------CCCCCcCH
Confidence             89999988763    2  27999999999998763100          00011111111111         11245679


Q ss_pred             HHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          193 KDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +|+|++++.++....  ..|+.+++.+|..
T Consensus       225 edvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          225 EEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            999999999987543  4688999998754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.74  E-value=7.6e-18  Score=132.60  Aligned_cols=197  Identities=20%  Similarity=0.183  Sum_probs=134.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++...+        ...+...++.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIAR--------IREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211        11122357899999999999888766532     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +..++++++.    ...++|++||...+..           ..+...| .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  154 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----------HPGMSVYSA  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----------CTTBHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------CCCchHHHH
Confidence            9999987421                    1233444432    3458999999876421           1223345 9


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhH----HHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      +|...+.+.+       ..+++++.++||.+.+|.... ....    .+........++         ..+.+++|+|++
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~  225 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGTADEVARA  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            9998888763       358999999999999875321 1111    111111111111         234568999999


Q ss_pred             HHHHhcC-ccccCceEEecCCCccCHHH
Q 024575          199 FVQVLGN-EKASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       199 ~~~~~~~-~~~~~~~~~i~~~~~~s~~e  225 (265)
                      ++.++.. ....|+.+++.+|...++.+
T Consensus       226 v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          226 VLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             HHHHcCcCcCccCCEEEECCCccccCcC
Confidence            9988764 23468899999987766543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.74  E-value=1.5e-18  Score=137.19  Aligned_cols=197  Identities=14%  Similarity=0.107  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.....++.++.+|++|++++.++++.      .++|
T Consensus        15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            799999999999999999999999999865421110     11111124688899999999988877743      3799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..++++++    +  +..++|++||...+..           ..+...
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPYEAV  158 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCcch
Confidence            99999996321                    122344433    2  5679999999876421           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHH---HHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFH---RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      | .+|...+.+.+       ..++++++++||.+.++...... ......   ......         ....+.+++|+|
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA  229 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------ALRRMGEPKELA  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CCCCCCCHHHHH
Confidence            4 89999988763       34899999999999876210000 000000   111111         112477899999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++++.++..+.  ..|+.+++.+|..++
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          230 AMVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCccccCCCCCEEEECCCcccc
Confidence            99999886542  358899999886543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.74  E-value=1.2e-17  Score=131.58  Aligned_cols=196  Identities=18%  Similarity=0.238  Sum_probs=131.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++++........    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW----LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999985443321111    0112222357899999999999888877642     7899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  163 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTNY  163 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-----------CSCCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-----------CCCCccc
Confidence            9999996421                    1    222333333  5678999999776421           1223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++.... .............++         ..+.+.+|+|++++.
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887753       368999999999998763111 112222222222221         235568999999999


Q ss_pred             HhcCc--cccCceEEecCCCcc
Q 024575          202 VLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      ++...  ...|+.+++.+|..+
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            88653  346889999988654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.74  E-value=6e-18  Score=132.43  Aligned_cols=193  Identities=13%  Similarity=0.211  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceE-EEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|+||++++++|+++|++|+++ .|++.... .+.    ..+.....++.. +.+|++|.+++.++++.     .++
T Consensus         7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAE-EVA----EEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHH-HHH----HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHH----HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999998 67644311 110    111111235666 89999999988877653     279


Q ss_pred             cEEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |+|||+||....                    +    ++.+++.++  +.+++|++||...+...           .+..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~  150 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------PGQA  150 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------SSBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------CCCc
Confidence            999999986421                    1    333444444  67899999997654211           1223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+.+       ..+++++++|||.++++.... .............+         ...+++++|+|+++
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  220 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAV  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            34 88998887653       248999999999998874211 11112222222111         12467899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +.++..+.  ..|+.|++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            99987643  358899998864

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.74  E-value=3.4e-18  Score=135.41  Aligned_cols=201  Identities=15%  Similarity=0.216  Sum_probs=133.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH-hhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+..+.....     ..+ .....++.++.+|++|.+++.++++.     ..+|
T Consensus        20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   94 (265)
T 1h5q_A           20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT-----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS   94 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH-----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH-----HHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999765522111     111 11134788999999999988877763     2599


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHhC----C--C-CCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~~----~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||+||....                    +..++++++    .  + ..++|++||...+.....    ...+..+..
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~  170 (265)
T 1h5q_A           95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQV  170 (265)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccccc
Confidence            99999986321                    122344442    2  2 478999999876422110    001122334


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+++       ..+++++++|||.++++.... .............++         ..+.+++|+|+++
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  240 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPL---------NRFAQPEEMTGQA  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSCBCGGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc-cchhHHHHHHhcCcc---------cCCCCHHHHHHHH
Confidence            45 89999988763       348999999999999874221 111222222221111         2367899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +.++..+.  ..|+.|++.+|..
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhhccCchhcCcCcEEEecCCEe
Confidence            99987643  4688999998754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.74  E-value=1.3e-17  Score=133.58  Aligned_cols=193  Identities=17%  Similarity=0.245  Sum_probs=128.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|+++.|++++.....     ..+.....++.++.+|++|.+++.++++.     .++|+
T Consensus        50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999888754421100     11111124688999999999998887753     27999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+||....                    +    ++.++..+.  +..++|++||...+...           .+...|
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  193 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------VGQANY  193 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CCCchH
Confidence            9999986421                    2    222333333  56899999998764211           112334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++.... ....+........  +       ...+++++|+|++++.
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~--~-------~~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNI--P-------AGRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTC--T-------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhC--C-------CCCCCCHHHHHHHHHH
Confidence             88998887653       358999999999998874221 1122222222211  1       1236789999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++..+.  ..|+.+++.++.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            987643  368899998875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.74  E-value=1.1e-17  Score=130.81  Aligned_cols=193  Identities=18%  Similarity=0.219  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|+++ .|++... ..+.    ..+.....++.++.+|++|++++.++++..     ++|
T Consensus         7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAA-EEVS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHH----HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999995 5654331 1110    111112346888999999999988877632     699


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    ++.+++++    +.  +..++|++||...+...           .+...
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCcc
Confidence            99999986421                    12233333    22  56899999998654211           12233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..+++++++|||.++++.... +...+.......  .+       ...+.+++|+|++++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~  220 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGT--IP-------LGRTGQPENVAGLVE  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTS--CT-------TCSCBCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhc--CC-------CCCCCCHHHHHHHHH
Confidence            4 88998887653       358999999999998863111 111122222211  11       124678999999999


Q ss_pred             HHhcCcc---ccCceEEecCCC
Q 024575          201 QVLGNEK---ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~---~~~~~~~i~~~~  219 (265)
                      .++.++.   ..|+.|++.++.
T Consensus       221 ~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHhCCCccCCcCCCEEEeCCCc
Confidence            9984432   358899998875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.74  E-value=2.1e-17  Score=130.99  Aligned_cols=200  Identities=17%  Similarity=0.193  Sum_probs=130.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+...  ..++.++.+|++|++++.++++..     ++
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421110     111111  246888999999999888877632     68


Q ss_pred             cEEEEcCCCCcc-c------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           74 DVVYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        74 d~vi~~a~~~~~-~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |++||+||.... .                        ++.++..++  +..++|++||...+..           ..+.
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  162 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------IGNQ  162 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------CSSB
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------CCCC
Confidence            999999986422 0                        123444444  5689999999876421           1123


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCccc----CCCCCCceeeeeeHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP----IPGSGIQVTQLGHVKD  194 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~D  194 (265)
                      ..| .+|...+.+.+       ..++++++++||.++++.     ...... ........    ..........+.+.+|
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~-----~~~~~~-~~~~~~~~~~~~~~~~~~p~~r~~~~~d  236 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM-----VENSMK-QLDPENPRKAAEEFIQVNPSKRYGEAPE  236 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH-----HHHHHH-HHCTTCHHHHHHHHHTTCTTCSCBCHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc-----hhcccc-ccChhhhhhHHHHHhccCCCCCCcCHHH
Confidence            334 89998887763       358999999999998763     111000 00000000    0000001124678999


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +|++++.++..+.  ..|+.+++.+|..++
T Consensus       237 vA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          237 IAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            9999999986542  368899999886543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.74  E-value=1.2e-17  Score=131.62  Aligned_cols=197  Identities=15%  Similarity=0.144  Sum_probs=131.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A           12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-----LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876521110     111111357889999999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----C-C--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----L-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~-~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..+++++    + +  +..++|++||...+..           ......
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  155 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-----------GPGVIH  155 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-----------CTTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-----------CCCcHH
Confidence            9999995321                    12233333    2 2  4678999999876421           112233


Q ss_pred             c-cchhhHHHHHh--------hcCCceeEeecceeeCCCCCCchh--HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~-~~k~~~E~~~~--------~~~~~~~i~r~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      | .+|...+.+.+        ..+++++.++||.+.++.......  ..+........         ....+...+|+|+
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~  226 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV---------PLGRLGTPEEIAG  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS---------TTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC---------CCCCCcCHHHHHH
Confidence            4 88988887652        348999999999999875322110  00011111111         1124678999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      +++.++....  ..|+.+++.+|..++
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          227 LAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHcCchhcCccCCEEEECCCcccC
Confidence            9999987643  368899999987654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.74  E-value=2.6e-17  Score=130.03  Aligned_cols=203  Identities=15%  Similarity=0.203  Sum_probs=128.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~----~~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+...  ..++.++.+|++|++++.++++.    .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A           13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-----SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865421110     011110  12688999999999988877762    2499


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +    ++.++..++  +..++|++||...+..           ..+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  156 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-----------WQDLAL  156 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-----------CCCCch
Confidence            99999986321                    1    133444444  6689999999887521           112333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHH-HHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.+       ..++++++++||.++++.......... .....................+.+++|+|+++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  236 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV  236 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            4 88988887753       358999999999999885321100000 00000000000000000112367899999999


Q ss_pred             HHHhcCc--cccCceEEecCCC
Q 024575          200 VQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +.++..+  ...|+.+++.++.
T Consensus       237 ~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          237 AFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            9998754  2468899998874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.74  E-value=1.8e-17  Score=131.27  Aligned_cols=190  Identities=17%  Similarity=0.232  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+..+..+.        ......++.++.+|++|++++.++++.     .++|+
T Consensus        33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999976542111        112235789999999999988877763     27999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..           ..+...|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  173 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG-----------NPGQTNY  173 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-----------CCCchhH
Confidence            9999997421                    1    223334443  5679999999776421           1123334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+.++.... .............++         ..+.+.+|+|++++.
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~edvA~~v~~  243 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887653       358999999999998763111 111222222222222         245668999999999


Q ss_pred             HhcCcc--ccCceEEecCCC
Q 024575          202 VLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++....  ..|+.+++.+|.
T Consensus       244 L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCccccCccCCEEEECCCe
Confidence            886543  368899998875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.74  E-value=6.4e-18  Score=135.95  Aligned_cols=209  Identities=17%  Similarity=0.136  Sum_probs=137.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhc---cceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||+++++.|+++|++|++++|++++.....     ..+.....   ++.++.+|++|++++.++++..     +
T Consensus        32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999865421110     11111112   6889999999999888777632     7


Q ss_pred             ccEEEEcCCCCccc----------------------hHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           73 FDVVYDINGREADE----------------------VEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        73 ~d~vi~~a~~~~~~----------------------~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|++||+||.....                      ..+++++    +. ...++|++||...+...          ..+
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~  176 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA----------HSG  176 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------CTT
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC----------CCC
Confidence            99999999863211                      1223333    32 22799999998764211          012


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc--hh------HHHHHHHHcCCcccCCCCCCceeee
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      ...| .+|..++.+.+       ..++++++++||.+.++.....  ..      ........  ...       ....+
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------p~~r~  247 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK--ECI-------PVGHC  247 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTC-------TTSSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHH--hcC-------CCCCC
Confidence            2334 89998887753       4689999999999988731100  00      00011100  111       11246


Q ss_pred             eeHHHHHHHHHHHhcCc---cccCceEEecCCCccCHHHHHHHHHHH
Q 024575          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKYVTFDGLARACAKV  233 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~s~~el~~~i~~~  233 (265)
                      ..++|+|++++.++..+   ...|+.+++.++..+...+.+..+.+.
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            78999999999998654   346889999998877766655554443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.74  E-value=2.1e-17  Score=131.36  Aligned_cols=195  Identities=17%  Similarity=0.188  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.....+.+.    ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVV----AAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            8999999999999999999999888554333221111    112222357899999999999888877643     7899


Q ss_pred             EEEcCCCCcc---------------------chHHHH----HhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           76 VYDINGREAD---------------------EVEPIL----DALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~----~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +||+||....                     +..+++    ..+.     +..++|++||...+...          ...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  177 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS----------ATQ  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC----------TTT
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC----------CCC
Confidence            9999986321                     112222    2222     35689999998765211          111


Q ss_pred             cc-cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~-~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .. |..+|...+.+.+       ..++++++++||.+.++..................         ....+.+++|+|+
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~edvA~  248 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---------PMQRAGMPEEVAD  248 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CC---------TTSSCBCHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcC---------CcCCCcCHHHHHH
Confidence            22 4489999888753       35899999999999987532211111111111111         1223557999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +++.++....  ..|+.+++.+|
T Consensus       249 ~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          249 AILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCCccccccCCEEeecCC
Confidence            9999986543  35889999886

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.73  E-value=9.6e-18  Score=133.53  Aligned_cols=194  Identities=14%  Similarity=0.102  Sum_probs=130.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.......        ..+...++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA--------ATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986542111        1122357899999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  +..++|++||...+.           +..+...|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y  175 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------AVGGTGAY  175 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCCCchhH
Confidence            9999997421                    12223333    32  557899999977542           12223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcC-C-cccC-CCC---CCceeeeeeHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-R-PIPI-PGS---GIQVTQLGHVKDL  195 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~-~-~~~~-~~~---~~~~~~~i~~~D~  195 (265)
                       .+|...+.+.+       ..++++++++||.+++|.         ....... . .... ...   ......+.+++|+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  246 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM---------QQTAMAMFDGALGAGGARSMIARLQGRMAAPEEM  246 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHHTCC------CCHHHHHHHHHSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch---------HHHhhhcchhhHHHHhhhhhhhccccCCCCHHHH
Confidence             89998888763       368999999999998862         1111110 0 0000 000   0011246779999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      |++++.++....  ..|+.+++.+|...+
T Consensus       247 A~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          247 AGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            999999986543  468899999986544

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.73  E-value=1.1e-17  Score=132.88  Aligned_cols=195  Identities=19%  Similarity=0.242  Sum_probs=129.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK----NELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999997554222111    111222357899999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +.    +.++..++  +..++|++||...+..           ..+...|
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  179 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----------NMGQTNY  179 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------CCCchHh
Confidence            9999997421                    12    22333333  5679999999776421           1223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+..+....     +.......     .........+.+.+|+|++++.
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~-----~~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKAD-----YVKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGGGCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHHH-----HHhcCCcCCCcCHHHHHHHHHH
Confidence             89998888763       368999999999998774211     11111000     0111122356789999999999


Q ss_pred             HhcCcc--ccCceEEecCCCc
Q 024575          202 VLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++..+.  ..|+.+++.+|..
T Consensus       250 l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTSC
T ss_pred             HhCCCcCCCcCCEEEeCCCee
Confidence            987643  4688999998753

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.73  E-value=3e-18  Score=135.12  Aligned_cols=195  Identities=14%  Similarity=0.078  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (265)
                      |||+|+||+++++.|+++|++|++++|++.+..               .  . +.+|++|.+++.++++..  ++|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A--D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c--c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            799999999999999999999999999876521               1  1 578999999999888743  6799999


Q ss_pred             cCCCCc-c------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCC-----------------CC
Q 024575           79 INGREA-D------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT  122 (265)
Q Consensus        79 ~a~~~~-~------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~-----------------~~  122 (265)
                      +||... .            +..+++++    ++  +..++|++||...+......+..+.                 .+
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            999754 1            22333333    32  5589999999887621110000000                 11


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      ..+...| .+|...+.+.+       ..++++++++||.+.++.................  +.     .....+.+++|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FV-----PPMGRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CC-----CSTTSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--cc-----cccCCCCCHHH
Confidence            1123345 89999888763       3589999999999988742111000000000000  00     01124678999


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      +|++++.++..+  ...|+.+.+.++..
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            999999998765  34588999988754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.73  E-value=5.3e-17  Score=127.27  Aligned_cols=191  Identities=17%  Similarity=0.201  Sum_probs=131.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++....        ...........+.+|++|++++.++++..     ++|+
T Consensus        15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQA--------ISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999998654211        11112345788999999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  +..++|++||...+..           ..+...|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  155 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-----------NAGQANY  155 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------CCCChHH
Confidence            9999997421                    12233333    32  5679999999776421           1123334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+..+.... .............+         ...+.+++|+|++++.
T Consensus       156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~  225 (248)
T 3op4_A          156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-LNDEQRTATLAQVP---------AGRLGDPREIASAVAF  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             89998887753       458999999999998875321 11122222222211         1245679999999999


Q ss_pred             HhcCcc--ccCceEEecCCCc
Q 024575          202 VLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++....  ..|+.+++.+|..
T Consensus       226 L~s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          226 LASPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTSS
T ss_pred             HcCCccCCccCcEEEECCCee
Confidence            886543  3588999998753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.73  E-value=1.4e-17  Score=132.14  Aligned_cols=198  Identities=13%  Similarity=0.171  Sum_probs=130.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.........    ........++.++.+|++|.+++.++++..     ++|+
T Consensus        31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL----MHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHH----HHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999865543211110    111111357899999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  +..++|++||...+..           ..+...|
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  175 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG-----------AFGQANY  175 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTBHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC-----------CCCcchH
Confidence            9999996421                    12223333    32  5679999999776421           1123344


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+..+..... ..    ........    .......+.+.+|+|++++.
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~----~~~~~~~~----~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-PQ----DVLEAKIL----PQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-ch----hHHHHHhh----hcCCcCCccCHHHHHHHHHH
Confidence             89998887753       3589999999999988742211 11    11110100    01112345679999999999


Q ss_pred             HhcCcc--ccCceEEecCCCccC
Q 024575          202 VLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++....  ..|+.+++.+|..++
T Consensus       247 L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HhCCCcCCeeCcEEEECCCEeCc
Confidence            987643  468899999987654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.73  E-value=1.9e-17  Score=130.89  Aligned_cols=199  Identities=17%  Similarity=0.106  Sum_probs=124.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.......        ..+....+.++.+|++|.+++.++++..     ++|+
T Consensus        15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV--------AGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986552111        1122357899999999999888777643     7899


Q ss_pred             EEEcCCCCcc---------------------chHHHHHh----CC------CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           76 VYDINGREAD---------------------EVEPILDA----LP------NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~----~~------~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +||+||....                     +..+++++    ++      ...++|++||...+.           +..
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR-----------PRP  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-----------CCT
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-----------CCC
Confidence            9999986421                     11222332    22      144699999977541           111


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ....| .+|...+.+.+       ..+++++.++||.+.++.....+     ... ................+++++|+|
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM-----GED-SEEIRKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc-----ccC-cHHHHHHHhhcCCcCCCcCHHHHH
Confidence            23334 89998888763       36899999999999887421110     000 000001111111223578899999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCccCHH
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (265)
                      ++++.++....  ..|+.+++.+|..++..
T Consensus       230 ~~~~~l~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          230 EAAAFLCSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred             HHHHHHcCCcccCcCCcEEEecCCcccCCC
Confidence            99999986443  46899999998877543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.73  E-value=1.1e-17  Score=131.78  Aligned_cols=199  Identities=18%  Similarity=0.185  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     111111246889999999999888877632     7999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +.    +.++..++  + ..++|++||...+..           ..+...
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  151 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------NPELAV  151 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------CCCchh
Confidence            9999986321                    11    22333333  3 579999999765311           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHc-----CCc-ccCCCCCCceeeeeeHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-----GRP-IPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D  194 (265)
                      | .+|...+.+.+       ..++++++++||.+.++.     ..........     ... ............+.+.+|
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  226 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch-----hhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHH
Confidence            4 89998887763       358999999999998763     1111100000     000 000000001124678999


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +|++++.++..+.  ..|+.+.+.+|..
T Consensus       227 vA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          227 VAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            9999999986542  3688999988754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.73  E-value=6.3e-18  Score=135.71  Aligned_cols=220  Identities=14%  Similarity=0.038  Sum_probs=141.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||++++++|+++|++|++++|+..+.......        +..++.++.+|++|.+++.++++.. ++|++||+
T Consensus        22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART--------MAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--------SSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999999999999987653221111        1357899999999999999988854 68999999


Q ss_pred             CCCCc------------------cchHHHHHhCC--CCCcEEEEecceeeecCC-CCCCC-CCCCCCccccc-cchhhHH
Q 024575           80 NGREA------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHC-ETDTVDPKSRH-KGKLNTE  136 (265)
Q Consensus        80 a~~~~------------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~-~~~~~-e~~~~~~~~~~-~~k~~~E  136 (265)
                      ||...                  .+..++++++.  -.+++|++||...+.... ..... +..+..+...| .+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            99631                  12445566644  345999999988764321 11111 11223344445 9999988


Q ss_pred             HHHh-------hcC--CceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          137 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       137 ~~~~-------~~~--~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      .+.+       ..+  ++++.++||.+..+..... ...+....     ..    ....+-..+.+|+|+.++.++..+.
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~-----~~----~~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDAL-----MS----AATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHH-----HH----HHHHHHhCCHHHHHHHHHHHHcCCC
Confidence            7763       235  9999999999987642110 00000000     00    0011223458999999999988776


Q ss_pred             ccCceEEecCCCcc---------------CHHHHHHHHHHHhCCCc
Q 024575          208 ASRQVFNISGEKYV---------------TFDGLARACAKVTGLLD  238 (265)
Q Consensus       208 ~~~~~~~i~~~~~~---------------s~~el~~~i~~~~g~~~  238 (265)
                      ..|+.+.+.++..-               ...++++...+.+|...
T Consensus       244 ~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~  289 (291)
T 3rd5_A          244 PGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEF  289 (291)
T ss_dssp             CTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcccc
Confidence            67888888654221               13456777777766543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.73  E-value=1.5e-17  Score=132.01  Aligned_cols=196  Identities=16%  Similarity=0.161  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+.....++..+.+|++|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGI-----GAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999976542111     0112222347889999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  +..++|++||...+..           ..+...|
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  177 (270)
T 3ftp_A          109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG-----------NPGQVNY  177 (270)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----------CCCchhH
Confidence            9999996321                    12233333    22  5578999999776521           1123335


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++... .+............+         ...+.+.+|+|++++.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK-GLPQEQQTALKTQIP---------LGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-HSCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh-hcCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence             89998887753       36899999999998876210 011111111211111         1246679999999999


Q ss_pred             HhcCcc--ccCceEEecCCCccC
Q 024575          202 VLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++....  ..|+.+++.+|..++
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          248 LASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCCCcCCccCcEEEECCCcccC
Confidence            886432  368899999987553

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.73  E-value=3.3e-17  Score=129.39  Aligned_cols=203  Identities=16%  Similarity=0.137  Sum_probs=126.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc-cccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|+||+++++.|+++|++|++++|++.. ... +.    ..+... ..++.++.+|++|++++.++++.     .++
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A           10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEK-VR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHH-HH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHH-HH----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999997654 111 10    111111 24688899999999988877763     279


Q ss_pred             cEEEEcCCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~----~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||+||....                    +..++++    .++  +..++|++||...+..           ..+..
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  153 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------SANKS  153 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-----------CCCCc
Confidence            999999986321                    1222333    333  5689999999876421           11223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHH-Hc-CCcccCC-CCCCceeeeeeHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL-KA-GRPIPIP-GSGIQVTQLGHVKDLA  196 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~i~~~D~a  196 (265)
                      .| .+|..++.+.+       ..++++++++||.+.++..... ........ .. ....... ........+.+++|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence            34 89998888763       3489999999999998742111 00000000 00 0000000 0000113577899999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++++.++....  ..|+.+++.++..
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCcc
Confidence            99999986542  3688999988753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.73  E-value=5.3e-17  Score=128.25  Aligned_cols=199  Identities=13%  Similarity=0.082  Sum_probs=131.3

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+  |+||++++++|+++|++|++++|++.. ...+     ..+....+++.++.+|++|++++.++++..     ++
T Consensus        14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998631 1010     111111134789999999999888777642     78


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +..++++++.    ...++|++||...+..           ..+
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  156 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----------CCC
Confidence            999999986421                        1234555533    2358999999765421           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..++++++++||.++++..... .............++         ..+.+++|+|
T Consensus       157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva  227 (261)
T 2wyu_A          157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVG  227 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2334 89999888763       3489999999999998752111 112222222222221         1345699999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCccCHHH
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s~~e  225 (265)
                      ++++.++....  ..|+.+++.++..++..|
T Consensus       228 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          228 NLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            99999986533  358899999987655433

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.73  E-value=1.5e-17  Score=132.60  Aligned_cols=201  Identities=15%  Similarity=0.157  Sum_probs=134.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-----DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865421110     111111357889999999999888777642     7999


Q ss_pred             EEEcCCCCcc---------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                     +..+++++    +.  +..++|++||...+..          +..+...
T Consensus        89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~  158 (280)
T 3tox_A           89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GFAGVAP  158 (280)
T ss_dssp             EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CCTTCHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CCCCchh
Confidence            9999995311                     12233333    22  4569999999776411          1122333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch---hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      | .+|...+.+.+       ..+++++.++||.+.++......   ............++         ..+.+++|+|+
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~  229 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KRIARPEEIAE  229 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CCCcCHHHHHH
Confidence            5 89998888763       35899999999999988532111   11222222222211         24567999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCccCHHH
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~e  225 (265)
                      +++.++....  ..|+.+++.+|..++..-
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~~~~~a  259 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGASVTKAA  259 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCC--
T ss_pred             HHHHHhCccccCCcCcEEEECCCccccccc
Confidence            9999987643  468999999987766433

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.73  E-value=8.3e-17  Score=127.77  Aligned_cols=196  Identities=16%  Similarity=0.136  Sum_probs=129.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.....+.+.    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV----SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999998887544222111    112222357899999999999988877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHH----hCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +..++++    .++...++|++||....          ..+..+...| .
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~a  169 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKHSLYSG  169 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCCchhHH
Confidence            9999997421                    1222333    34445689999996521          0112223345 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCC----------ch-hHHHHHHHHcCCcccCCCCCCceeeeeeH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----------PV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (265)
                      +|...+.+.+       ..+++++.++||.+.++....          .. ............++         ..+.+.
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p  240 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL---------HRNGWP  240 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT---------CSCBCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC---------CCCCCH
Confidence            9999888763       368999999999998874110          00 01111111111111         235569


Q ss_pred             HHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          193 KDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +|+|++++.++....  ..|+.+++.+|.
T Consensus       241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          241 QDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            999999999986543  468899998874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.73  E-value=1.2e-17  Score=135.85  Aligned_cols=224  Identities=17%  Similarity=0.097  Sum_probs=133.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.........+...........++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~   90 (324)
T 3u9l_A           11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDV   90 (324)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999975331110000000111122357899999999999988877643     7999


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhC----C--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~----~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||...                    .+..++++++    +  +..++|++||...+...          ......|
T Consensus        91 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~----------~~~~~~Y  160 (324)
T 3u9l_A           91 LIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT----------PPYLAPY  160 (324)
T ss_dssp             EEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------CSSCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----------CCcchhH
Confidence            999999632                    1233444443    4  67899999998764211          1112334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCC---Cc--hhHHHHHHHHcCCcccCCCCCCc--------eee
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NP--VEEWFFHRLKAGRPIPIPGSGIQ--------VTQ  188 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~--------~~~  188 (265)
                       .+|..+|.+.+       ..|+++++++||.+.++...   ..  .............   ..+.++.        ..+
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~  237 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGP---NAGLGEEIKKAFAAIVPP  237 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTT---TTTHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhcccc---ccCCHHHHHHHHHHhcCC
Confidence             99999988763       35899999999999865321   00  0000111111100   0000000        011


Q ss_pred             eeeHHHHHHHHHHHhcCccc-cCceEEecCCCccC-------HHHHHHHHHHHhCCCc
Q 024575          189 LGHVKDLARAFVQVLGNEKA-SRQVFNISGEKYVT-------FDGLARACAKVTGLLD  238 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~~~-~~~~~~i~~~~~~s-------~~el~~~i~~~~g~~~  238 (265)
                      ..+++|+|++++.+++.+.. ....+.++ +....       ..++.+.+.+.+|.+.
T Consensus       238 ~~~p~~vA~aiv~~~~~~~~~~~~~~~~g-p~~~~~~~~~~~~~~~~~~~~~~~g~~~  294 (324)
T 3u9l_A          238 DADVSLVADAIVRVVGTASGKRPFRVHVD-PAEDGADVGFSVLDRLRAEMLHRVGLSD  294 (324)
T ss_dssp             TCCTHHHHHHHHHHHTSCTTCCCSEEEEC-TTCCSHHHHHHHHHHHHHHHHHHTTCGG
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCCeEEEeC-CcchHHHHHHHHHHHHHHHHHHHcChHh
Confidence            25689999999999988742 23345444 33344       4445556666667654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.73  E-value=1.9e-17  Score=132.14  Aligned_cols=197  Identities=17%  Similarity=0.248  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.........    ..+.....++.++++|++|++++.++++..     ++|+
T Consensus        35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVI----AELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHH----HHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999975443221111    111222357899999999999888777642     7999


Q ss_pred             EEEcCCCC--cc--------------------chHHH----HHhCC--C---CCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           76 VYDINGRE--AD--------------------EVEPI----LDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        76 vi~~a~~~--~~--------------------~~~~l----~~~~~--~---~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +||+||..  ..                    +..++    +..+.  +   ..++|++||...+..           ..
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~  179 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-----------SP  179 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-----------CC
Confidence            99999872  10                    12222    23332  2   568999999876421           11


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      +...| .+|...+.+.+       ..+++++.++||.+.++.... ...........        .......+..++|+|
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~--------~~~p~~r~~~pedvA  250 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-VSGKYDGLIES--------GLVPMRRWGEPEDIG  250 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-cchhHHHHHhh--------cCCCcCCcCCHHHHH
Confidence            22334 89998887753       368999999999998874211 11001000000        011123467799999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++++.++....  ..|+.+++.+|..+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          251 NIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccc
Confidence            99999987653  46899999988643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=6.2e-17  Score=126.69  Aligned_cols=190  Identities=18%  Similarity=0.196  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++++.....        ..  .++.++.+|++|++++.++++.     .++|+
T Consensus        11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A           11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA--------EA--VGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HT--TTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HH--cCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110        00  1478899999999988887763     25999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +.    +.++..++  +..++|++||...++..           ....|.
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~Y~  149 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-----------GQANYA  149 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-----------TCHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC-----------CchhHH
Confidence            9999996321                    11    22333343  56799999998733211           112233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..++++++++||.+..+.... +............+.         ..+.+.+|+|++++.+
T Consensus       150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~l  219 (245)
T 1uls_A          150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRAGKPLEVAYAALFL  219 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCCcCHHHHHHHHHHH
Confidence            88888877653       458999999999998875321 111122222211111         1366799999999999


Q ss_pred             hcCcc--ccCceEEecCCCcc
Q 024575          203 LGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +..+.  ..|+.+.+.++..+
T Consensus       220 ~s~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          220 LSDESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCchhcCCcCCEEEECCCccc
Confidence            87542  36889999887543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.73  E-value=1.9e-17  Score=130.55  Aligned_cols=191  Identities=17%  Similarity=0.202  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc----CccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|+..+....           ...++.++.+|++|++++.++++..    ++|++
T Consensus        15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A           15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVAD-----------LGDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHH-----------TCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHh-----------cCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999999999999964432221           1357899999999999888777532    79999


Q ss_pred             EEcCCCCcc------------------------chHHHHHh----CC----------CCCcEEEEecceeeecCCCCCCC
Q 024575           77 YDINGREAD------------------------EVEPILDA----LP----------NLEQFIYCSSAGVYLKSDLLPHC  118 (265)
Q Consensus        77 i~~a~~~~~------------------------~~~~l~~~----~~----------~~~~~v~~Ss~~~~~~~~~~~~~  118 (265)
                      ||+||....                        +...++++    +.          +..++|++||...+.        
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  155 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD--------  155 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C--------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC--------
Confidence            999985310                        11222222    21          234799999987641        


Q ss_pred             CCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       119 e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                         +..+...| .+|...+.+.+       ..+++++.++||.+..+.... +............+.  .      ..+.
T Consensus       156 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~r~~  223 (257)
T 3tl3_A          156 ---GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--P------SRLG  223 (257)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--S------CSCB
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--C------CCcc
Confidence               11122335 89998887753       468999999999998875321 122222222222111  0      2466


Q ss_pred             eHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +.+|+|++++.+++++...|+.+++.+|..+.
T Consensus       224 ~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          224 NPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             CHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            79999999999998876679999999987554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.73  E-value=6e-17  Score=128.22  Aligned_cols=193  Identities=16%  Similarity=0.185  Sum_probs=129.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.......        ..+...++.++.+|++|++++.++++..     ++|+
T Consensus        18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--------AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            79999999999999999999999999987652111        1111247889999999999888877632     7999


Q ss_pred             EEEcCCCCcc--------------------------chHHHHHh----CC--------CCCcEEEEecceeeecCCCCCC
Q 024575           76 VYDINGREAD--------------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPH  117 (265)
Q Consensus        76 vi~~a~~~~~--------------------------~~~~l~~~----~~--------~~~~~v~~Ss~~~~~~~~~~~~  117 (265)
                      +||+||....                          +..+++++    ++        +..++|++||...+...     
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  164 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  164 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence            9999986311                          11223333    22        24689999998775321     


Q ss_pred             CCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeee
Q 024575          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                            .+...| .+|...+.+.+       ..++++++++||.+.++.... ............  .+.      ...+
T Consensus       165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~--~~~------~~~~  229 (265)
T 2o23_A          165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQ--VPF------PSRL  229 (265)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHT--CSS------SCSC
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHc--CCC------cCCC
Confidence                  123334 88998887653       358999999999998874211 100000011111  111      0246


Q ss_pred             eeHHHHHHHHHHHhcCccccCceEEecCCCcc
Q 024575          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (265)
                      .+.+|+|++++.+++++...|+.+.+.++..+
T Consensus       230 ~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          230 GDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            78999999999999876667889999987654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.73  E-value=6.2e-17  Score=126.83  Aligned_cols=184  Identities=19%  Similarity=0.283  Sum_probs=123.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++..                ..+..+.+|++|++++.++++.     .++|+
T Consensus        21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986552                1122388999999988877763     26899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    ++  +..++|++||...+..           ..+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  153 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-----------IGNQANY  153 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC-----------CCCChhH
Confidence            9999996421                    12233333    32  5689999999865421           1112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++... .+..........  ..+       ...+.+.+|+|++++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~--~~p-------~~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQ--FIP-------AKRVGTPAEVAGVVSF  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGG--GCT-------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-hcCHHHHHHHHh--cCC-------CCCCcCHHHHHHHHHH
Confidence             88998887753       35899999999998765210 000111111111  111       1236789999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++..+.  ..|+.+++.++..+
T Consensus       224 l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          224 LASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTC
T ss_pred             HcCccccCCcCCEEEECCCccc
Confidence            987542  36889999987643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.73  E-value=8.6e-18  Score=133.43  Aligned_cols=197  Identities=15%  Similarity=0.178  Sum_probs=132.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-----QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            899999999999999999999999999765522111     112222357889999999999988877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHH----HHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l----~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..++    +..+.  +..++|++||...+.           +..+...|
T Consensus       107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~~~~~Y  175 (271)
T 4ibo_A          107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-----------ARATVAPY  175 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCTTCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------CCCCchhH
Confidence            9999996321                    12233    33333  557999999977531           12223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+.+       ..+++++.++||.+.++...... ...+........++         ..+..++|+|++++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~  246 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAV  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             89998888763       36899999999999887421100 01112222222222         23456899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCccC
Q 024575          201 QVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      .++....  ..|+.+++.+|...+
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          247 FLSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHhCccccCCCCcEEEECCCeecc
Confidence            9886543  468899999986543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.72  E-value=3.3e-17  Score=129.93  Aligned_cols=193  Identities=16%  Similarity=0.152  Sum_probs=130.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.........    ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus        32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETL----NAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            8999999999999999999999887765433211110    111222357899999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC------C-CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~------~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..++++++      + +..++|++||...+..           ..+...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  176 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG-----------NRGQVN  176 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC-----------CTTCHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC-----------CCCCch
Confidence            9999987421                    233344442      2 5679999999776421           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..++++++++||.+.++.....  ...........++         ..+.+.+|+|++++
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~  245 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLAS  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4 88987777652       3589999999999998753222  2223333322222         23557999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++....  ..|+.+++.+|.
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          246 YLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCCcccCccCCEEEeCCCc
Confidence            9987543  468899998863

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.72  E-value=5.6e-17  Score=128.51  Aligned_cols=194  Identities=13%  Similarity=0.140  Sum_probs=126.5

Q ss_pred             CCccc-cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+| .||++++++|+++|++|++++|+........     ..+... ..++.++.+|++|.+++.++++..     .+
T Consensus        28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (266)
T 3o38_A           28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR-----DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL  102 (266)
T ss_dssp             SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence            79998 6999999999999999999999875521111     011111 257899999999999988877642     78


Q ss_pred             cEEEEcCCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           74 DVVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |++||+||....                    +..+++++    ++   +..++|++||...+.           +..+.
T Consensus       103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  171 (266)
T 3o38_A          103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-----------AQHSQ  171 (266)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-----------CCTTC
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-----------CCCCC
Confidence            999999996321                    12223333    22   446899999977642           12233


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..| .+|...+.+.+       ..+++++.++||.+.++..............         ........+.+.+|+|++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRL---------ASDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHH---------HhcCCcCCCCCHHHHHHH
Confidence            345 89999888763       3689999999999987742111111111111         111122356789999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCC
Q 024575          199 FVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++.++....  ..|+.+++.+|.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            999987542  468899998874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.72  E-value=2.2e-16  Score=125.77  Aligned_cols=193  Identities=15%  Similarity=0.141  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEc-CCCccccCCCCCChhHHhhh-hccceEEEecCCCh----HHHHHHhhcc---
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK---   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~~~---   71 (265)
                      |||+|+||++++++|+++|++|++++| ++... ..+.    ..+... ..++.++.+|++|.    +++.++++..   
T Consensus        17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA-QRLV----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHH----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHH-HHHH----HHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            899999999999999999999999999 54331 1110    111111 24688999999999    8888777532   


Q ss_pred             --CccEEEEcCCCCc--------------------cc-----------hHHHHHh----CC-CC------CcEEEEecce
Q 024575           72 --GFDVVYDINGREA--------------------DE-----------VEPILDA----LP-NL------EQFIYCSSAG  107 (265)
Q Consensus        72 --~~d~vi~~a~~~~--------------------~~-----------~~~l~~~----~~-~~------~~~v~~Ss~~  107 (265)
                        ++|++||+||...                    ..           ..+++++    +. +.      .++|++||..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A           92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence              7999999998631                    11           1123333    32 33      7999999987


Q ss_pred             eeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccC
Q 024575          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (265)
Q Consensus       108 ~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  179 (265)
                      .+..           ..+...| .+|...+.+.+       ..++++++++||.+++| .  .+............  +.
T Consensus       172 ~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~--p~  235 (276)
T 1mxh_A          172 TDLP-----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKV--PL  235 (276)
T ss_dssp             GGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTC--TT
T ss_pred             hcCC-----------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcC--CC
Confidence            6521           1122334 89999887763       35899999999999998 2  22222222322221  11


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                            .+++.+++|+|++++.++..+.  ..|+.+++.++..
T Consensus       236 ------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 ------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             ------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence                  1126789999999999987543  3588999988753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.72  E-value=4.4e-18  Score=135.65  Aligned_cols=193  Identities=20%  Similarity=0.265  Sum_probs=127.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+++......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421100     111111246889999999999888777632     6999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh------CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~------~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                    +..+++++      +.  +..++|++||...+..           ..+..
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  171 (277)
T 2rhc_B          103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAA  171 (277)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----------CCCCc
Confidence            9999986321                    12223333      22  3579999999865311           11223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-----------HHHHHHHcCCcccCCCCCCceee
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-----------WFFHRLKAGRPIPIPGSGIQVTQ  188 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  188 (265)
                      .| .+|...+.+.+       ..++++++++||.+.++... ....           .........  .       ....
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r  241 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA-SVREHYSDIWEVSTEEAFDRITAR--V-------PIGR  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH-HHHHHHHHHHTCCHHHHHHHHHHH--S-------TTSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh-hhhhhcccccccchHHHHHHHHhc--C-------CCCC
Confidence            34 89998888763       24799999999999876310 0000           000001000  0       1124


Q ss_pred             eeeHHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          189 LGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++++|+|++++.++..+.  ..|+.+++.++.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            7889999999999987643  368899998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.72  E-value=9.2e-17  Score=127.27  Aligned_cols=194  Identities=19%  Similarity=0.216  Sum_probs=128.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH-hhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||+++++.|+++|++|++++|+........     ..+ .....++.++.+|++|++++.++++..     ++|
T Consensus        27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (267)
T 1vl8_A           27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD  101 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     111 111246788999999999888777632     799


Q ss_pred             EEEEcCCCCcc--------------------chHHH----HHhCC--CCCcEEEEecce-eeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l----~~~~~--~~~~~v~~Ss~~-~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||+||....                    +..++    +..++  +..++|++||.. .+.           +..+..
T Consensus       102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  170 (267)
T 1vl8_A          102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TMPNIS  170 (267)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CSSSCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CCCCCh
Confidence            99999986421                    12222    33333  567999999976 221           111233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh--HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .| .+|..++.+.+       ..++++++++||.+.++... ...  ...........++         ..+.+.+|+|+
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~  240 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE-AVFSDPEKLDYMLKRIPL---------GRTGVPEDLKG  240 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-HHHTCHHHHHHHHHTCTT---------SSCBCGGGGHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc-ccccChHHHHHHHhhCCC---------CCCcCHHHHHH
Confidence            34 89999988763       35899999999999887421 110  1111111111111         13667899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++.++....  ..|+.+.+.+|..
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHcCccccCCcCCeEEECCCCC
Confidence            9999986542  3688999988753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.72  E-value=3.2e-17  Score=128.22  Aligned_cols=186  Identities=14%  Similarity=0.123  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHHcCC-------eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   70 (265)
                      |||+|+||++++++|+++|+       +|++++|++..... +.    ..+.....++.++.+|++|++++.++++.   
T Consensus         8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEK-IS----LECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHH-HH----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHH-HH----HHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            79999999999999999999       99999997644211 10    11111124688999999999988877763   


Q ss_pred             --cCccEEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCC
Q 024575           71 --KGFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                        .++|+|||+||....                    +..+++++    ++  +..++|++||...+..           
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  151 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----------  151 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC-----------
Confidence              269999999986321                    22333443    22  5689999999887531           


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      ..+...| .+|..++.+.+       ..+++++++|||.++++..... .          .      ..  ...+++++|
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~----------~------~~--~~~~~~~~d  212 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-D----------D------EM--QALMMMPED  212 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-C----------S------TT--GGGSBCHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-c----------c------cc--cccCCCHHH
Confidence            1223345 89999887762       3589999999999999852110 0          0      00  125788999


Q ss_pred             HHHHHHHHhcCccc--cCceEEecCCCcc
Q 024575          195 LARAFVQVLGNEKA--SRQVFNISGEKYV  221 (265)
Q Consensus       195 ~a~~~~~~~~~~~~--~~~~~~i~~~~~~  221 (265)
                      +|++++.++..+..  .++.+...+++.+
T Consensus       213 va~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          213 IAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHHHhCCccccchheEEecccccc
Confidence            99999999976542  4555655555544

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.72  E-value=8.2e-17  Score=126.44  Aligned_cols=175  Identities=10%  Similarity=0.095  Sum_probs=124.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+..+.                 ....+.+|++|.+++.++++..     ++|+
T Consensus        28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987652                 2235788999999888777642     6899


Q ss_pred             EEEcCCCCcc---------------------chHHHHHhC----CCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD---------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                     +..++++++    +...++|++||...+.           +..+...| 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~  159 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RTSGMIAYG  159 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTTBHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CCCCCchhH
Confidence            9999995211                     122333332    2335899999987642           12223345 


Q ss_pred             cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 ~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|...+.+.+         ..++++++++||.+.++         +........         ....+++++|+|++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP---------TNRKYMSDA---------NFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH---------HHHHHCTTS---------CGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc---------chhhhcccc---------cccccCCHHHHHHHHH
Confidence            89999988763         25799999999998765         122221111         2235678999999999


Q ss_pred             HHhcC---ccccCceEEecCCCcc
Q 024575          201 QVLGN---EKASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~---~~~~~~~~~i~~~~~~  221 (265)
                      .++.+   ....|+.+++.+++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99987   3346889998876543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.72  E-value=9.2e-17  Score=126.21  Aligned_cols=184  Identities=16%  Similarity=0.233  Sum_probs=124.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++..                ..+.++.+|++|++++.++++.     ..+|+
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541                3477899999999988877763     25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~----~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..++++    .++  +..++|++||...+.           +..+...|
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  159 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL-----------GSAGQANY  159 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-----------CHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCCcHHH
Confidence            9999986321                    1222333    332  567999999976531           11112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+..+.... +...........  .+       ...+++.+|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~--~p-------~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQ--VP-------LGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTT--CT-------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHH
Confidence             88998887763       357999999999987764211 100001111111  11       1246789999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++.++.  ..|+.+.+.++..+
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTC
T ss_pred             HhCccccCCcCcEEEECCcccc
Confidence            987643  36889999887643

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.72  E-value=4.6e-17  Score=128.44  Aligned_cols=200  Identities=17%  Similarity=0.141  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc--cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|++|++++|++..  ....     ...+.....++.++.+|++|++++.++++..     ++
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAET-----IKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999997654  1110     0111111346889999999999888777532     79


Q ss_pred             cEEEEcCCCCcc--------------------chHHHH----HhCC--CC-CcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           74 DVVYDINGREAD--------------------EVEPIL----DALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~----~~~~--~~-~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |++||+||....                    +..+++    ..++  +. .++|++||...+..           ..+.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  151 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-----------FPIL  151 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----------CTTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----------CCCc
Confidence            999999986321                    112233    3333  45 79999999876421           1122


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHH---cC--Cc-ccCCCCCCceeeeeeH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AG--RP-IPIPGSGIQVTQLGHV  192 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~---~~--~~-~~~~~~~~~~~~~i~~  192 (265)
                      ..| .+|...+.+.+       ..++++++++||.+..+.     .........   ..  .. ............+.+.
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  226 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM-----WEQIDAELSKINGKPIGENFKEYSSSIALGRPSVP  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH-----HHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh-----hhhhhhhhccccCCchHHHHHHHHhcCCCCCccCH
Confidence            334 89999887753       358999999999987652     111110000   00  00 0000000011236789


Q ss_pred             HHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          193 KDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +|+|++++.++..+.  ..|+.+++.+|..+
T Consensus       227 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          227 EDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            999999999986542  46889999987654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.72  E-value=8.7e-18  Score=134.99  Aligned_cols=198  Identities=22%  Similarity=0.266  Sum_probs=131.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||++++++|+++|++|+++.|+.... .+.+    ...+.....++.++.+|++|++++.++++.     .++|
T Consensus        55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV----KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHH----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999998874321 1111    011122235788999999999988877753     2799


Q ss_pred             EEEEcCCCCcc---------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           75 VVYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        75 ~vi~~a~~~~~---------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      ++||+||....                     +..+++++    ++...++|++||...+..           ..+...|
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  199 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-----------SPHLLDY  199 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-----------CCCchHH
Confidence            99999996321                     12234444    233458999999887532           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.++++....        ...................+...+|+|++++.
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--------GGQTQDKIPQFGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHT--------TTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccc--------cCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             89999888753       358999999999998863000        00000111111122222356778999999999


Q ss_pred             HhcCcc--ccCceEEecCCCcc
Q 024575          202 VLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++....  ..|+.+++.+|..+
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            886543  46889999998754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.5e-16  Score=126.28  Aligned_cols=194  Identities=18%  Similarity=0.182  Sum_probs=129.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.....+.+.    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVV----SEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999877543221111    112222357889999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHH----HhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +...++    ..++...++|++||.....          .+..+...| .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~~Y~a  182 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGISLYSA  182 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCchHHHH
Confidence            9999997321                    122233    3344557899998864320          111223345 9


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+.+       ..+++++.++||.+.++......  ..........+.         ..+...+|+|++++.++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            9998888753       35899999999999987532110  011111111111         13456899999999988


Q ss_pred             cCc--cccCceEEecCCC
Q 024575          204 GNE--KASRQVFNISGEK  219 (265)
Q Consensus       204 ~~~--~~~~~~~~i~~~~  219 (265)
                      ...  ...|+.+++.+|.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            643  3468899998874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.72  E-value=3.7e-17  Score=130.39  Aligned_cols=195  Identities=15%  Similarity=0.180  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+........     ..+......+.++.+|++|.+++.++++..     .+|+
T Consensus        30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999865421111     111222357889999999999888777642     7899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh------CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~------~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                    +..+++++      +.  +..++|++||...+.           +..+..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~~~~  173 (279)
T 3sju_A          105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-----------GVMYAA  173 (279)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-----------CCCCCh
Confidence            9999997421                    12223332      22  557999999987642           111223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc----------hhHHHHHHHHcCCcccCCCCCCceeee
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      .| .+|..++.+.+       ..+++++.++||.+.++.....          .............         ....+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~  244 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---------PLGRY  244 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC---------TTSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC---------CCCCC
Confidence            34 89998887763       3689999999999987621000          0011111111111         12245


Q ss_pred             eeHHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      .+++|+|++++.++....  ..|+.+++.+|..
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            679999999999987653  4688999998753

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.71  E-value=5e-17  Score=127.13  Aligned_cols=189  Identities=13%  Similarity=0.166  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc---CccEE
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~d~v   76 (265)
                      |||+|+||++++++|++ .|+.|+++.|++...               ...+.++.+|++|++++.++++..   ++|++
T Consensus        10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A           10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999 689999999876531               246788999999999888877532   79999


Q ss_pred             EEcCCCCcc--------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cc
Q 024575           77 YDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (265)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~  131 (265)
                      ||+||....                    +..++++++.    ...++|++||...+.           +..+...| .+
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~Y~as  143 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI-----------AKPNSFAYTLS  143 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC-----------CCTTBHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc-----------CCCCCchhHHH
Confidence            999997321                    2334555543    225899999987642           11123334 99


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHc--CC----cccCCCCCCceeeeeeHHHHHHH
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GR----PIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      |...+.+.+       ..++++++++||.+.++.     ..........  +.    .............+.+++|+|++
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  218 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL-----YRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAEL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH-----HHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh-----hHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence            999888763       468999999999998763     1111111000  00    00000001112346779999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCc
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++.++..+.  ..|+.+++.+|..
T Consensus       219 v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          219 VIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhcCccccccCCeEeECCCcc
Confidence            999987543  3688999998754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.71  E-value=3e-17  Score=130.46  Aligned_cols=195  Identities=14%  Similarity=0.124  Sum_probs=129.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|.+.. .+.     ...+.....++.++.+|++|.+++.++.+.    .++|++
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l  110 (273)
T 3uf0_A           37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEV-----ADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL  110 (273)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHH-----HHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence            7999999999999999999999999975322 110     011112235788999999999888776432    279999


Q ss_pred             EEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      ||+||....                    +..+++++    +.  +..++|++||...+.           +..+...| 
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~~~~~Y~  179 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ-----------GGRNVAAYA  179 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCSSCHHHH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC-----------CCCCChhHH
Confidence            999997421                    12233333    23  567899999987642           11123334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+.+       ..+++++.++||.+.++...... ............++         ..+..++|+|++++.
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~  250 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWATPEDMVGPAVF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            89998888763       36899999999999887421000 01111111111111         235678999999999


Q ss_pred             HhcCc--cccCceEEecCCCcc
Q 024575          202 VLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      ++...  ...|+.+++.+|..+
T Consensus       251 L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          251 LASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhcCCcCCEEEECcCccC
Confidence            98754  346889999998654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.71  E-value=1e-16  Score=127.84  Aligned_cols=195  Identities=13%  Similarity=0.116  Sum_probs=132.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+...... +    ...+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-A----EHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHH-H----HHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765211 1    011111124688999999999998888763     25999


Q ss_pred             EEEcCCCCcc------c--------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD------E--------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~------~--------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |||+||....      .                    ++.+++.++  +..++|++||...+..         ....+..
T Consensus       115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~~~~~  185 (279)
T 3ctm_A          115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIPQLQA  185 (279)
T ss_dssp             EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred             EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCCCCcc
Confidence            9999985321      1                    345556655  6789999999875321         0122233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...|.+++       ..+ ++++++||.+.++.... ............  .+       ...+++++|+|+++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~--~p-------~~~~~~~~dvA~~~  254 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWWQL--TP-------LGREGLTQELVGGY  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHHHH--ST-------TCSCBCGGGTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHHHh--CC-------ccCCcCHHHHHHHH
Confidence            45 89999998863       246 99999999998875321 111122221111  11       12367899999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +.++..+.  ..|+.+++.++..
T Consensus       255 ~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          255 LYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCccCCEEEECCCee
Confidence            99987642  4688999998754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=4.8e-17  Score=128.58  Aligned_cols=192  Identities=18%  Similarity=0.256  Sum_probs=130.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++......        .++..++.++.+|++|++++.++++..     .+|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--------AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999865421111        111246888999999999888877632     6899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +..+++++    ++...++|++||...++.            .+...| .
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~Y~a  151 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA  151 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------------CCcHHHHH
Confidence            9999986321                    12223333    322468999999876410            112234 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+.+       ..++++++++||.+.++.... +............++         ..+.+.+|+|++++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            8988777653       358999999999998874221 112222222222111         13567999999999998


Q ss_pred             cCcc--ccCceEEecCCCccC
Q 024575          204 GNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ..+.  ..|+.+++.++..+.
T Consensus       222 s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          222 SEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             SGGGTTCCSCEEEESTTTTTC
T ss_pred             CccccCCcCCEEEECCCcccc
Confidence            7543  468899999886543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.71  E-value=7e-17  Score=127.81  Aligned_cols=178  Identities=17%  Similarity=0.161  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.+... .+.          ..++.++.+|++|.+++.++++..     ++|+
T Consensus        22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLK-ALN----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH-TTC----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-Hhh----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999866522 222          247889999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chHH----HHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+    ++..++  +..++|++||...+..           ..+...|
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  159 (266)
T 3p19_A           91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----------FPDHAAY  159 (266)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----------CCCCchH
Confidence            9999997321                    1223    333333  6689999999876421           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++.++||.+.++................. ..+       ...+++++|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~  231 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLF  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHH
Confidence             89998887653       3689999999999988742111111111111100 011       1236779999999999


Q ss_pred             HhcCccc
Q 024575          202 VLGNEKA  208 (265)
Q Consensus       202 ~~~~~~~  208 (265)
                      ++.++..
T Consensus       232 l~~~~~~  238 (266)
T 3p19_A          232 AYQQPQN  238 (266)
T ss_dssp             HHHSCTT
T ss_pred             HHcCCCC
Confidence            9987653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.71  E-value=3e-17  Score=130.68  Aligned_cols=195  Identities=15%  Similarity=0.181  Sum_probs=128.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.. ..++.++.+|++|++++.++++.     .++|+
T Consensus        35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-----TRLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421110     01111 12678899999999988877763     27999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CC----CcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~----~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +||+||....                    +.    +.++..++  +.    .++|++||...+...          ...
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----------~~~  178 (276)
T 2b4q_A          109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----------GEQ  178 (276)
T ss_dssp             EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC----------CCS
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC----------CCC
Confidence            9999986321                    12    22333332  33    799999998765321          111


Q ss_pred             c-ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 K-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~-~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      . .|..+|..++.+.+       ..++++++++||.+.++.... ...............+       ...+.+.+|+|+
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p-------~~r~~~p~dvA~  250 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIP-------MGRWGRPEEMAA  250 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTST-------TSSCCCHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCC-------CCCcCCHHHHHH
Confidence            2 34489999888763       358999999999998874211 1100111111100011       123678999999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +++.++..+.  ..|+.+++.++.
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCCc
Confidence            9999987642  468899998875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.71  E-value=1.2e-16  Score=127.32  Aligned_cols=207  Identities=12%  Similarity=0.073  Sum_probs=132.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccC-CCCC-------ChhHHhhhhccceEEEecCCChHHHHHHhhc--
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGE-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   70 (265)
                      |||+|+||++++++|+++|++|++++|+....... ....       ....+......+.++.+|++|++++.++++.  
T Consensus        17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   96 (277)
T 3tsc_A           17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGV   96 (277)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999864321100 0000       0011122235788999999999998887764  


Q ss_pred             ---cCccEEEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCC
Q 024575           71 ---KGFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (265)
Q Consensus        71 ---~~~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~  120 (265)
                         .++|++||+||....                    +..+++++    +.  + ..++|++||...+..         
T Consensus        97 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  167 (277)
T 3tsc_A           97 AALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM---------  167 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC---------
Confidence               369999999997421                    12223333    32  2 468999999876421         


Q ss_pred             CCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcc-cCCCCCCceeeeee
Q 024575          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGH  191 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  191 (265)
                        ......| .+|...+.+.+       ..+++++.++||.+.++.................... ...... ....+.+
T Consensus       168 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~  244 (277)
T 3tsc_A          168 --QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF-LPDWVAE  244 (277)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS-SSCSCBC
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc-cCCCCCC
Confidence              1122334 89999888763       3589999999999988743221111112111111111 111111 1124788


Q ss_pred             HHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .+|+|+++++++....  ..|+.+++.+|.
T Consensus       245 pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          245 PEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            9999999999987543  468899999875

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.71  E-value=2.5e-17  Score=128.01  Aligned_cols=166  Identities=17%  Similarity=0.116  Sum_probs=111.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.....         +.....++.++.+|++|.+++.++++..     ++|+
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A           11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQA---------LAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211         1110137889999999999888777532     7899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    ++.+++.++  +..++|++||...+..           ..+...|
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  150 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------FKGGAAY  150 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------CCCCchh
Confidence            9999986321                    1    124445443  5789999999876421           1223344


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..+++++++|||.+..+...         .. . ..          ..+++.+|+|++++.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---------~~-~-~~----------~~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG---------NT-P-GQ----------AWKLKPEDVAQAVLF  209 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc---------cc-c-cc----------cCCCCHHHHHHHHHH
Confidence             89998877652       36899999999988765311         00 0 00          115689999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      ++.++.
T Consensus       210 l~~~~~  215 (234)
T 2ehd_A          210 ALEMPG  215 (234)
T ss_dssp             HHHSCC
T ss_pred             HhCCCc
Confidence            987653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.71  E-value=4e-16  Score=124.70  Aligned_cols=198  Identities=16%  Similarity=0.088  Sum_probs=128.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.....+.+    ...+.....++.++.+|++|.+++.++++.     .++|+
T Consensus        35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999864321111    011112234688999999999988777653     27999


Q ss_pred             EEEcCCCCcc--------------------chHHHHH----hCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +..++++    .+++..++|++||...+..          ...+...| .
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~a  180 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPKHAVYSG  180 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSSCHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------CCCCCcchHH
Confidence            9999996421                    1222333    3445579999999765311          11113335 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCc---h-------hHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---V-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                      +|...+.+.+       ..++++++++||.+.++.....   +       ..............       ....+.+.+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~~p~  253 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS-------PLRRVGLPI  253 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC-------TTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC-------CCCCCcCHH
Confidence            9999888763       3589999999999987621000   0       00111111110000       112366899


Q ss_pred             HHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          194 DLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      |+|++++.++....  ..|+.+++.+|.
T Consensus       254 dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          254 DIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            99999999987543  468899998874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.71  E-value=1.9e-16  Score=125.34  Aligned_cols=196  Identities=14%  Similarity=0.113  Sum_probs=129.6

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+  |+||++++++|+++|++|++++|++ ...+.+     ..+....+...++.+|++|++++.++++..     ++
T Consensus        15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHH-----HHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999  9999999999999999999999986 211111     111111134578999999999888777632     68


Q ss_pred             cEEEEcCCCCcc-------------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |++||+||....                         +..++++++.    ...++|++||...+..           ..
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  157 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----------IP  157 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----------CC
Confidence            999999986431                         1223344432    2358999999776421           11


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      +...| .+|...+.+.+       ..++++++++||.++++..... ....+........++         ..+.+++|+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  228 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDV  228 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            22334 89999988763       2489999999999998853211 112222222222221         135679999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      |++++.++..+.  ..|+.+++.++..++
T Consensus       229 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          229 GNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999986543  357899999886543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.71  E-value=5.6e-17  Score=128.83  Aligned_cols=202  Identities=14%  Similarity=0.119  Sum_probs=133.0

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+  |+||++++++|+++|++|++++|+... .+.+     ..+....+.+.++.+|++|++++.++++..     ++
T Consensus        20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRI-----TEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHH-----HHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998432 1111     111112346889999999999988877642     78


Q ss_pred             cEEEEcCCCCcc-------------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |++||+||....                         +..++++++.    ...++|++||...+..           ..
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  162 (271)
T 3ek2_A           94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-----------IP  162 (271)
T ss_dssp             EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-----------CC
Confidence            999999986421                         1223444432    3458999999876421           12


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      +...| .+|..++.+.+       ..++++++++||.+..+...... ............++         ..+..++|+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedv  233 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQV  233 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHH
Confidence            23334 89998888753       35899999999999887532211 12222333222222         124568999


Q ss_pred             HHHHHHHhcCc--cccCceEEecCCCccCHHHHHH
Q 024575          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLAR  228 (265)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~el~~  228 (265)
                      |++++.++...  ...|+.+++.+|..++..++++
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            99999998753  3468999999998877666543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.71  E-value=6.6e-17  Score=128.03  Aligned_cols=195  Identities=21%  Similarity=0.213  Sum_probs=125.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.....+.+.    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVA----GKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998766544222111    111222357889999999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +..+++++    ++...++|++||...+...           .....| .
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  177 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----------PSYGIYAA  177 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----------TTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----------CCchHHHH
Confidence            9999997421                    12223333    3334689999997764211           112334 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+.+       ..+++++.++||.+..+..................         ....+..++|+|++++.++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLA---------PLERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSS---------TTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHh
Confidence            9999988763       35899999999999876421111111111111111         1124567999999999998


Q ss_pred             cCcc--ccCceEEecCCC
Q 024575          204 GNEK--ASRQVFNISGEK  219 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~~  219 (265)
                      ....  ..|+.+++.+|.
T Consensus       249 s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             STTTTTCCSEEEEESSSC
T ss_pred             CccccCccCCEEEeCCCc
Confidence            6543  368899998863

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.71  E-value=5e-17  Score=128.72  Aligned_cols=196  Identities=15%  Similarity=0.168  Sum_probs=130.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||+++++.|+++|++|++++|+.+......     ..+.. ...++.++.+|++|++++.++++..     ++|
T Consensus        26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  100 (266)
T 4egf_A           26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD  100 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999865521111     11111 2357899999999999887777542     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||+||....                    +...++++    +.  + ..++|++||...+.           +..+..
T Consensus       101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  169 (266)
T 4egf_A          101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA-----------PLPDHY  169 (266)
T ss_dssp             EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-----------CCCCCh
Confidence            99999997421                    12223333    22  2 46899999987642           112223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      .| .+|...+.+.+       ..+++++.++||.+..+...... ............++         ..+...+|+|++
T Consensus       170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~  240 (266)
T 4egf_A          170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAVPHEVSDA  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            34 89998887753       35899999999999876310000 01111112221111         235669999999


Q ss_pred             HHHHhcCc--cccCceEEecCCCcc
Q 024575          199 FVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      +++++...  ...|+.+++.+|..+
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          241 VVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCccCcEEEECCCccC
Confidence            99988754  346889999988654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.71  E-value=1.6e-16  Score=126.37  Aligned_cols=195  Identities=17%  Similarity=0.172  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+.... +    ..++.....++.++.+|++|++++.++++..     ++|+
T Consensus        38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQV-V----ADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH-H----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997655211 1    1122222357899999999999988877643     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..+++++    +.  + ..++|++||...+...         ...+...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~~~~  183 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQVSH  183 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSCCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCCcch
Confidence            9999997421                    12223333    22  2 3689999997753211         1112333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..+++++.++||.+..+....  ............++         ..+...+|+|++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--~~~~~~~~~~~~p~---------~r~~~pedvA~~v~  252 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP--LADYHALWEPKIPL---------GRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG--GGGGHHHHGGGSTT---------SSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--chHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 89999888763       368999999999998875321  11111222211111         23566899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      .++....  ..|+.+++.+|..
T Consensus       253 fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHcCccccCccCcEEEECcCcc
Confidence            9987543  4688999998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.71  E-value=9.1e-17  Score=126.01  Aligned_cols=183  Identities=13%  Similarity=0.150  Sum_probs=121.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||++++++|+++|++|++++|++.. .           .+. ..+.++ +|+  .+++.++++.. ++|++||+
T Consensus        25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-~-----------~~~-~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           25 LAASRGIGRAVADVLSQEGAEVTICARNEEL-L-----------KRS-GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-H-----------HHT-CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH-H-----------Hhh-CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            7999999999999999999999999998622 1           111 355666 999  33444444332 89999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cch
Q 024575           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k  132 (265)
                      ||.....                        ++.+++.++  +..++|++||...+..           ..+...| .+|
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK  157 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----------IENLYTSNSAR  157 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC-----------CCCCchHHHHH
Confidence            9864211                        223445554  6689999999887532           1122334 889


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHH-HHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      ...+.+.+       ..++++++++||.++++... ........ ......  +       ...+.+++|+|++++.++.
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~--p-------~~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-ELLSEEKKKQVESQI--P-------MRRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-HHSCHHHHHHHHTTS--T-------TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc-ccchhhHHHHHHhcC--C-------CCCCcCHHHHHHHHHHHcC
Confidence            88887653       36899999999999988421 00011111 111111  1       1246789999999999887


Q ss_pred             Ccc--ccCceEEecCCCc
Q 024575          205 NEK--ASRQVFNISGEKY  220 (265)
Q Consensus       205 ~~~--~~~~~~~i~~~~~  220 (265)
                      .+.  ..|+.+++.++..
T Consensus       228 ~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            543  3588999998753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.70  E-value=7e-18  Score=134.45  Aligned_cols=197  Identities=12%  Similarity=0.165  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH-hhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+ .....++.++.+|++|++++.++++..     ++|
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  107 (277)
T 4fc7_A           33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA-----RKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID  107 (277)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865522111     011 111357889999999999888777642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++++    +.  +..++|++||...+..           ......
T Consensus       108 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  176 (277)
T 4fc7_A          108 ILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-----------QALQVH  176 (277)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-----------CTTCHH
T ss_pred             EEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----------CCCcHH
Confidence            99999985321                    22233333    33  4579999999876521           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+       ..+++++.++||.+.++.....+  ............++         ..+...+|+|++
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~  247 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGNKTEIAHS  247 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            4 88998887753       35899999999999886310000  01112222222222         235579999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCccC
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ++.++....  ..|+.+++.+|..++
T Consensus       248 v~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          248 VLYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHcCCccCCcCCCEEEECCCcccC
Confidence            999987533  468899999886544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.70  E-value=6.5e-17  Score=126.12  Aligned_cols=187  Identities=17%  Similarity=0.234  Sum_probs=124.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++++..           .+  .++.++.+|+++ +++.++++.     .++|+
T Consensus         8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~--~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-----------QS--LGAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-----------HH--HTCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------Hh--hCcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865410           11  137889999998 666555432     27999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +.    +.++..++  +..++|++||...+....         ..+...|
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y  144 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAY  144 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccH
Confidence            9999986321                    12    22333333  678999999988753210         1223345


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|...+.+.+       ..++++++++||.+.++...... ...+........+         ...+.+.+|+|++++
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAA  215 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             89998887753       35899999999999887411000 0111111111111         123678999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++..+.  ..|+.+++.++.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            9886542  358889998874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=1.7e-17  Score=131.72  Aligned_cols=200  Identities=18%  Similarity=0.178  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++....         +.....++.++.+|++|++++.++++..     ++|+
T Consensus        15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---------LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211         1111135788999999999888877642     7999


Q ss_pred             EEEcCCCCcc---------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD---------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                     +..+++++    ++ +..++|++||...+...          .....|.
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~  155 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----------AQAVPYV  155 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC----------TTCHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC----------CCCcccH
Confidence            9999986321                     12223333    22 35799999997643111          1112234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .+|...+.+.+       ..++++++++||+++++....     .-............++         ..+...+|+|+
T Consensus       156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~  226 (270)
T 1yde_A          156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGA  226 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CCCcCHHHHHH
Confidence            89999888763       368999999999999873100     0000000000111111         13567899999


Q ss_pred             HHHHHhcCc-cccCceEEecCCCccCHHHHHH
Q 024575          198 AFVQVLGNE-KASRQVFNISGEKYVTFDGLAR  228 (265)
Q Consensus       198 ~~~~~~~~~-~~~~~~~~i~~~~~~s~~el~~  228 (265)
                      +++.++.+. ...|+.+.+.+|..+.+.....
T Consensus       227 ~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~~  258 (270)
T 1yde_A          227 AAVFLASEANFCTGIELLVTGGAELGYGCKAS  258 (270)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTTSCC-----
T ss_pred             HHHHHcccCCCcCCCEEEECCCeecccCcCcc
Confidence            999888642 3468899999987776554443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=6.5e-17  Score=130.57  Aligned_cols=196  Identities=12%  Similarity=0.177  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-----hhccceEEEecCCChHHHHHHhhc-----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSA-----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-----   70 (265)
                      |||+|+||++++++|+++|++|++++|+........     ..+..     ...++.++.+|++|.+++.++++.     
T Consensus        24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999865421100     00100     124788999999999998888763     


Q ss_pred             cCccEEEEcCCCCc--------------------cchHHHHHhC-----C-CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           71 KGFDVVYDINGREA--------------------DEVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        71 ~~~d~vi~~a~~~~--------------------~~~~~l~~~~-----~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      .++|+|||+||...                    .++.++++++     + +..++|++||...++            ..
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG------------FP  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC------------CT
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC------------CC
Confidence            25999999998521                    1233444442     1 457899999876211            11


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh---HHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                      ....| .+|...+.+.+       ..+++++++|||+++++.......   ..........  .       ....+.+++
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~-------p~~~~~~~~  237 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--I-------PAKRIGVPE  237 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG--S-------TTSSCBCTH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc--C-------cccCCCCHH
Confidence            12234 78887776653       348999999999999984211110   0001000000  0       112467899


Q ss_pred             HHHHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          194 DLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      |+|++++.++....  ..|+.+++.++..++
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999986543  458899999986543

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.70  E-value=3.9e-17  Score=128.86  Aligned_cols=201  Identities=15%  Similarity=0.093  Sum_probs=126.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.++.........    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAV----AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHH----HHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999665544221110    112222357899999999999888877642     7999


Q ss_pred             EEEcCCCC-c--------------------cchHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGRE-A--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||.. .                    .+..++++++.    ...++|++||...+..          +..+...| 
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~  159 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------GGPGALAYA  159 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------CSTTCHHHH
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------CCCCcHHHH
Confidence            99999853 1                    11233444432    3358999999876511          11122334 


Q ss_pred             cchhhHHHHHh----h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       130 ~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      .+|...+.+.+    +  ..++++.++||.+..+...........         ...........+.+++|+|++++.++
T Consensus       160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVR---------ERVAGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHH---------HHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            89999888763    2  249999999999987642111000000         00111112235668999999999988


Q ss_pred             cCcc--ccCceEEecCCCccCHH
Q 024575          204 GNEK--ASRQVFNISGEKYVTFD  224 (265)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~s~~  224 (265)
                      ....  ..|+.+++.|+......
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC--
T ss_pred             CccccCccCCEEEECCCcCCCCC
Confidence            6543  36899999998765543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.70  E-value=7.1e-16  Score=123.03  Aligned_cols=194  Identities=9%  Similarity=0.061  Sum_probs=131.0

Q ss_pred             CCcccc--chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+  ||++++++|+++|++|++++|+...  +.     ...+.....++.++.+|++|.+++.++++..     ++
T Consensus        32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DR-----VEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HH-----HHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HH-----HHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            799966  9999999999999999999998711  10     0112122356899999999999988877642     68


Q ss_pred             cEEEEcCCCCcc-------------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                      |++||+||....                         +..+++++    ++ +..++|++||...+.           +.
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  173 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK-----------AM  173 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS-----------CC
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc-----------CC
Confidence            999999996421                         11223333    33 457899999987642           11


Q ss_pred             Cccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      .+...| .+|...+.+.+       ..+++++.++||.+..+..... .............+.         ..+...+|
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~ped  244 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIME  244 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHH
Confidence            223334 89998888753       3689999999999988742111 112222222222222         13456899


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +|++++.++....  ..|+.+++.+|..+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            9999999887543  46889999988654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.70  E-value=1.5e-17  Score=134.08  Aligned_cols=186  Identities=15%  Similarity=0.117  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876522111     111122357899999999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..+++++    +.  + ..++|++||...+.           +..+...
T Consensus       112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  180 (301)
T 3tjr_A          112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV-----------PNAGLGT  180 (301)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CCCCchH
Confidence            9999996321                    12333433    22  3 56899999987642           1122334


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHH-----HHcCCcccCCCCCCceeeeeeHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      | .+|...+.+.+       ..|+++++++||.+..+.     .......     .....+...++.......+++++|+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL-----VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH-----HHHHHHHC----------------------CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc-----ccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence            5 89998887752       358999999999987762     1111100     0001111111222334568899999


Q ss_pred             HHHHHHHhcCcc
Q 024575          196 ARAFVQVLGNEK  207 (265)
Q Consensus       196 a~~~~~~~~~~~  207 (265)
                      |++++.+++.+.
T Consensus       256 A~~i~~~l~~~~  267 (301)
T 3tjr_A          256 ARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCC
Confidence            999999998754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=1.3e-16  Score=127.36  Aligned_cols=197  Identities=15%  Similarity=0.118  Sum_probs=129.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhc---cceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.....   ++.++.+|++|++++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (280)
T 1xkq_A           12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   86 (280)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999865421110     01111112   6889999999999888777632     6


Q ss_pred             ccEEEEcCCCCcc------------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                      +|++||+||....                        +..+++++    +. ...++|++||...+...          .
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  156 (280)
T 1xkq_A           87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA----------Q  156 (280)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC----------C
T ss_pred             CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC----------C
Confidence            9999999986321                        11223333    22 22799999998764211          0


Q ss_pred             Cccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc--hh------HHHHHHHHcCCcccCCCCCCcee
Q 024575          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVT  187 (265)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~  187 (265)
                      .+...| .+|...+.+.+       ..++++++++||+++++.....  ..      ..+.....  ...       ...
T Consensus       157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------p~~  227 (280)
T 1xkq_A          157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK--ECI-------PIG  227 (280)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTC-------TTS
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH--cCC-------CCC
Confidence            122334 89999888763       3589999999999998741100  00      00111110  001       112


Q ss_pred             eeeeHHHHHHHHHHHhcCc---cccCceEEecCCCcc
Q 024575          188 QLGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (265)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (265)
                      .+.+++|+|++++.++..+   ...|+.+++.++..+
T Consensus       228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          228 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            4678999999999988654   346889999987543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.69  E-value=1.3e-15  Score=121.91  Aligned_cols=194  Identities=13%  Similarity=0.072  Sum_probs=128.4

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+  |+||+++++.|+++|++|++++|++.. ...+     ..+....+++.++.+|++|++++.++++..     ++
T Consensus        27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998631 1110     111111134788999999999888777642     78


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |++||+||....                        +..+++++    +. ...++|++||...+..           ..
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  169 (285)
T 2p91_A          101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV-----------VP  169 (285)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----------CC
Confidence            999999986421                        12233333    22 3479999999775421           11


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      +...| .+|...+.+.+       ..++++++++||.++++..... .............++         ..+.+++|+
T Consensus       170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  240 (285)
T 2p91_A          170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDV  240 (285)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            22334 89999888763       3589999999999999853221 112222222222111         124569999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      |++++.++....  ..|+.+++.++..
T Consensus       241 a~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          241 GDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            999999986533  3578899988753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.69  E-value=9.6e-18  Score=136.49  Aligned_cols=213  Identities=15%  Similarity=0.112  Sum_probs=139.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCC--CC---ChhHHhhhhccceEEEecCCChHHHHHHhhcc----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----   71 (265)
                      |||+|+||+++++.|+++|++|++++|+.........  ..   ....+......+.++.+|++|++++.++++..    
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  112 (322)
T 3qlj_A           33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF  112 (322)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            8999999999999999999999999987311100000  00   00112222356888999999999888777642    


Q ss_pred             -CccEEEEcCCCCcc--------------------chHHHHHhC----C--------CCCcEEEEecceeeecCCCCCCC
Q 024575           72 -GFDVVYDINGREAD--------------------EVEPILDAL----P--------NLEQFIYCSSAGVYLKSDLLPHC  118 (265)
Q Consensus        72 -~~d~vi~~a~~~~~--------------------~~~~l~~~~----~--------~~~~~v~~Ss~~~~~~~~~~~~~  118 (265)
                       ++|++||+||....                    +..++++++    .        ...++|++||...+..       
T Consensus       113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-------  185 (322)
T 3qlj_A          113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG-------  185 (322)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC-------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC-------
Confidence             79999999997421                    122233332    1        1258999999776521       


Q ss_pred             CCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       119 e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                          ......| .+|..++.+.+       ..+++++.++|| +..+.....+.. ..            ........++
T Consensus       186 ----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~~------------~~~~~~~~~~  247 (322)
T 3qlj_A          186 ----SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-MM------------ATQDQDFDAM  247 (322)
T ss_dssp             ----BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------------CCTT
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-hh------------hccccccCCC
Confidence                1122334 89999888763       368999999999 655432111100 00            0111223445


Q ss_pred             eHHHHHHHHHHHhcCcc--ccCceEEecCCCcc-----------------CHHHHHHHHHHHhCCCc
Q 024575          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYV-----------------TFDGLARACAKVTGLLD  238 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~-----------------s~~el~~~i~~~~g~~~  238 (265)
                      ..+|+|++++.++....  ..|+.+++.+|...                 +..|+++.+.+.+|.+.
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~  314 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKAR  314 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence            78999999999886543  36889999887654                 77999999999998654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.69  E-value=8.3e-16  Score=124.73  Aligned_cols=207  Identities=12%  Similarity=0.113  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChh-------HHhhhhccceEEEecCCChHHHHHHhhcc--
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--   71 (265)
                      |||+|+||+++++.|+++|++|++++|+..............       .+......+.++.+|++|++++.++++..  
T Consensus        52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  131 (317)
T 3oec_A           52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA  131 (317)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999998754321111111111       11122357889999999999988877642  


Q ss_pred             ---CccEEEEcCCCCcc--------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCCC
Q 024575           72 ---GFDVVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        72 ---~~d~vi~~a~~~~~--------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                         ++|++||+||....                    +...++++    +.   ...++|++||...+..          
T Consensus       132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~----------  201 (317)
T 3oec_A          132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG----------  201 (317)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC----------
Confidence               79999999996421                    12233333    32   2467999999876421          


Q ss_pred             CCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcC---Cc----cc-CCCCCCc
Q 024575          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP----IP-IPGSGIQ  185 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~---~~----~~-~~~~~~~  185 (265)
                       ......| .+|..++.+.+       ..+++++.++||.+.++.....   .........   ..    .. +......
T Consensus       202 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          202 -APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHHHHhhhccC
Confidence             1123335 89998887763       3589999999999988631100   001111000   00    00 0000111


Q ss_pred             eeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ...+.+++|+|+++++++....  ..|+.+++.+|...
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            2567899999999999886543  36889999988643

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.69  E-value=3.7e-16  Score=122.51  Aligned_cols=180  Identities=15%  Similarity=0.078  Sum_probs=118.9

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-------
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------   71 (265)
                      |||+|+||++++++|+++|  ++|++++|++.... .+.+.       ...++.++.+|++|.+++.++++..       
T Consensus         9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~-~l~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSI-------KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHTC-------CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH-HHHhc-------cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999  99999999866521 11110       0257899999999999888877642       


Q ss_pred             CccEEEEcCCCCc-c--------------------chHHHHHhCC-----C------------CCcEEEEecceeeecCC
Q 024575           72 GFDVVYDINGREA-D--------------------EVEPILDALP-----N------------LEQFIYCSSAGVYLKSD  113 (265)
Q Consensus        72 ~~d~vi~~a~~~~-~--------------------~~~~l~~~~~-----~------------~~~~v~~Ss~~~~~~~~  113 (265)
                      ++|+|||+||... .                    +..++++++.     .            ..++|++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            7999999998643 1                    1223333332     2            57899999987653221


Q ss_pred             CCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCc
Q 024575          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (265)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (265)
                      .    ...+..+...| .+|..++.+++       ..++++++++||.+.++....                        
T Consensus       161 ~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  212 (250)
T 1yo6_A          161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------
Confidence            1    11111233445 89999988763       248999999999987763100                        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCcc--ccCceEEecC
Q 024575          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISG  217 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~  217 (265)
                       ..+++.+|+|+.++.++..+.  ..|..+.+.+
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence             135678999999999997654  3465665554

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.69  E-value=1e-15  Score=123.10  Aligned_cols=196  Identities=13%  Similarity=0.092  Sum_probs=132.2

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|  +||+++++.|+++|++|++++|+.... +.+     ..+....+.+.++.+|++|++++.++++..     ++
T Consensus        36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK-KRV-----DPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHH-----HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH-HHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            79987  999999999999999999999985431 111     111111346789999999999988887642     78


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +..+++++    ++...++|++||...+.           +...
T Consensus       110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~-----------~~~~  178 (296)
T 3k31_A          110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK-----------VVPH  178 (296)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------CCTT
T ss_pred             CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-----------CCCC
Confidence            999999986421                        12234443    22446899999987642           1112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|..++.+.+       ..+++++.++||.+.++...... ............++.         .+...+|+|
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~---------r~~~pedvA  249 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLR---------RNTTLDDVG  249 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCC---------CCCCHHHHH
Confidence            2334 89998888753       35899999999999987532221 112222222222221         244589999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCccC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      ++++.++...  ...|+.+++.+|..+.
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCCccCCccCCEEEECCCcccc
Confidence            9999998753  3468899999986543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.69  E-value=2.5e-17  Score=130.52  Aligned_cols=201  Identities=13%  Similarity=0.117  Sum_probs=132.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc-CccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi   77 (265)
                      |||+|+||++++++|+++|++|++++|+.+...+..     ..+...  ...+..+.+|+++++.+.++++.. ++|++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETI-----KEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            899999999999999999999999999865521111     111111  235778999999999998888754 699999


Q ss_pred             EcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        78 ~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      |+||....                    +    ++.++..++  +..++|++||...+.           +..+...| .
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~a  159 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM-----------PSQEMAHYSA  159 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------CCTTCHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------CCCcchHHHH
Confidence            99996421                    1    223344443  557999999987642           11223345 9


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcc----------cCCCCCCceeeeeeHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI----------PIPGSGIQVTQLGHVK  193 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~  193 (265)
                      +|...+.+.+       ..+++++.++||.+..+.     ...+..........          ...........+.+++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH
Confidence            9999888763       247999999999987752     11111111000000          0000001123577899


Q ss_pred             HHHHHHHHHhcCc--cccCceEEecCCCccC
Q 024575          194 DLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      |+|++++.++...  ...|+.+++.+|...+
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999988754  3468999999987654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.69  E-value=2.2e-16  Score=125.35  Aligned_cols=178  Identities=19%  Similarity=0.181  Sum_probs=115.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+...+        ...+...++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQE--------TAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999998654211        11122357899999999999988877643     7999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--C--CCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +||+||....                     +    ++.++..++  +  ..++|++||...+.           +..+.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~~  174 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS-----------PRPYS  174 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-----------CCTTC
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-----------CCCCc
Confidence            9999997321                     1    122333333  2  46999999987642           12223


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..| .+|..++.+.+       ..+++++.++||.+..+...         .........  ........+.+++|+|++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------~~~~~~~~~--~~~~~~~~~~~pedvA~~  243 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ---------KMKAGVPQA--DLSIKVEPVMDVAHVASA  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh---------hhcccchhh--hhcccccCCCCHHHHHHH
Confidence            345 89999888753       36899999999999876311         110110000  001122347889999999


Q ss_pred             HHHHhcCccc
Q 024575          199 FVQVLGNEKA  208 (265)
Q Consensus       199 ~~~~~~~~~~  208 (265)
                      ++.++..+..
T Consensus       244 v~fL~s~~~~  253 (272)
T 4dyv_A          244 VVYMASLPLD  253 (272)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCCc
Confidence            9999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.69  E-value=1.6e-15  Score=117.03  Aligned_cols=188  Identities=15%  Similarity=0.162  Sum_probs=130.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||++.||+++++.|+++|++|++.+|+.+..... .          ..++..+.+|++|++++++++++. ++|++||+
T Consensus        17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-~----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A           17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-R----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-C----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-h----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999999999999987763322 1          267889999999999998888754 68999999


Q ss_pred             CCCCcc------------------c----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhH
Q 024575           80 NGREAD------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (265)
Q Consensus        80 a~~~~~------------------~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (265)
                      ||....                  +    .+.++..++ +..++|.+||....-           +......| .+|..+
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-----------~~~~~~~Y~asKaav  154 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF-----------GSADRPAYSASKGAI  154 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS-----------CCSSCHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC-----------CCCCCHHHHHHHHHH
Confidence            997421                  1    122333333 447899999987531           11112234 889888


Q ss_pred             HHHH-------hhcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          136 ESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       136 E~~~-------~~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ..+.       ...|++++.|.||.+..|..... ..........+..++..         +...+|+|+++++++....
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR---------WGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchh
Confidence            8764       35789999999999987742111 11123333333333332         2348999999999886543


Q ss_pred             --ccCceEEecCCC
Q 024575          208 --ASRQVFNISGEK  219 (265)
Q Consensus       208 --~~~~~~~i~~~~  219 (265)
                        ..|+.+.+.||.
T Consensus       226 ~~iTG~~l~VDGG~  239 (242)
T 4b79_A          226 SFVTGAVLAVDGGY  239 (242)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             cCccCceEEECccH
Confidence              368899988874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.68  E-value=8.3e-16  Score=123.35  Aligned_cols=195  Identities=10%  Similarity=0.084  Sum_probs=129.0

Q ss_pred             CCcccc--chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+  ||+++++.|+++|++|++++|++.. .+..     ..+.....++.++.+|++|++++.++++..     ++
T Consensus        37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRV-----EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHH-----HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799988  9999999999999999999998432 1111     111111356889999999999988877642     79


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHH----hCCCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +..++++    .++...++|++||...+..           ...
T Consensus       111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~~~  179 (293)
T 3grk_A          111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-----------MPN  179 (293)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----------CCc
Confidence            999999997420                        1222333    3344568999999876421           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..+++++.++||.+.++..... .............++         ..+...+|+|
T Consensus       180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  250 (293)
T 3grk_A          180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVG  250 (293)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2334 89998888753       3589999999999988742111 112222222222222         1245589999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ++++.++....  ..|+.+++.+|..+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCccccCCcceEEEECCCccc
Confidence            99999987542  46889999998654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.68  E-value=3e-16  Score=125.62  Aligned_cols=209  Identities=16%  Similarity=0.117  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCC----CCCh-------hHHhhhhccceEEEecCCChHHHHHHhh
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP----GESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~   69 (265)
                      |||+|+||+++++.|+++|++|++++|+.........    ....       ..+.....++.++.+|++|++++.++++
T Consensus        17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   96 (286)
T 3uve_A           17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD   96 (286)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            7999999999999999999999999998543211110    0000       1111223578899999999998887776


Q ss_pred             c-----cCccEEEEcCCCCcc---------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCC
Q 024575           70 A-----KGFDVVYDINGREAD---------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLP  116 (265)
Q Consensus        70 ~-----~~~d~vi~~a~~~~~---------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~  116 (265)
                      .     .++|++||+||....                     +..+++++    +.  + ..++|++||...+..     
T Consensus        97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  171 (286)
T 3uve_A           97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA-----  171 (286)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----
T ss_pred             HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC-----
Confidence            3     279999999996321                     12223333    22  2 468999999876421     


Q ss_pred             CCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCc------ccCCCC
Q 024575          117 HCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP------IPIPGS  182 (265)
Q Consensus       117 ~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~------~~~~~~  182 (265)
                            ......| .+|..++.+.+       ..+++++.++||.+..+...................      ......
T Consensus       172 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T 3uve_A          172 ------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH  245 (286)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence                  1122334 89998887753       368999999999999875322111000000000000      000011


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      . ....+.+.+|+|++++.++....  ..|+.+++.+|..+
T Consensus       246 ~-~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          246 T-LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             S-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             c-cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            1 11457789999999999986543  46889999988654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.68  E-value=1.9e-16  Score=123.22  Aligned_cols=175  Identities=13%  Similarity=0.123  Sum_probs=120.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-------cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~~   73 (265)
                      |||+|+||++++++|+++|++|++++|++....               ....++.+|++|++++.++++.       .++
T Consensus         9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999876521               2356778999999888776653       279


Q ss_pred             cEEEEcCCCCc-----c----------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           74 DVVYDINGREA-----D----------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        74 d~vi~~a~~~~-----~----------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |++||+||...     .                +..+++++    ++...++|++||...+.           +..+...
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  142 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PTPSMIG  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTTBHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----------CCCCcHH
Confidence            99999999532     1                11122333    22335899999987652           1122334


Q ss_pred             c-cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+         ..++++++++||.+.++.         ........         ....+++.+|+|++
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~---------~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DHSSWTPLSFISEH  204 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCCc---------cccccCCHHHHHHH
Confidence            5 89999888763         345999999999987761         11111111         11235678999999


Q ss_pred             HHHHhcCcc---ccCceEEecCCC
Q 024575          199 FVQVLGNEK---ASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~~---~~~~~~~i~~~~  219 (265)
                      ++.++.++.   ..|+.+.+.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            997774332   357888887654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.68  E-value=8.7e-16  Score=123.63  Aligned_cols=209  Identities=12%  Similarity=0.158  Sum_probs=131.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh-------hHHhhhhccceEEEecCCChHHHHHHhhc---
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   70 (265)
                      |||+|+||+++++.|+++|++|++++|++......+.....       ..+.....++.++.+|++|++++.++++.   
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  113 (299)
T 3t7c_A           34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT  113 (299)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985432111111100       11222235789999999999988877763   


Q ss_pred             --cCccEEEEcCCCCcc---------------------chHHHHHh----CC---CCCcEEEEecceeeecCCCCCCCCC
Q 024575           71 --KGFDVVYDINGREAD---------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCET  120 (265)
Q Consensus        71 --~~~d~vi~~a~~~~~---------------------~~~~l~~~----~~---~~~~~v~~Ss~~~~~~~~~~~~~e~  120 (265)
                        .++|++||+||....                     +...++++    +.   +..++|++||...+..         
T Consensus       114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~---------  184 (299)
T 3t7c_A          114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG---------  184 (299)
T ss_dssp             HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC---------
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC---------
Confidence              279999999986321                     12223332    22   3578999999876421         


Q ss_pred             CCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCccc------CCCCCCce
Q 024575          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQV  186 (265)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  186 (265)
                        ......| .+|..++.+.+       ..+++++.++||.+.++.....................      ..... ..
T Consensus       185 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p  261 (299)
T 3t7c_A          185 --AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV-LP  261 (299)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS-SS
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc-cC
Confidence              1122334 89998887753       35899999999999988532211100000000000000      00000 01


Q ss_pred             eeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          187 TQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      ..+...+|+|++++.++....  ..|+.+++.+|..+
T Consensus       262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            346789999999999987543  46889999988654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.68  E-value=2.4e-16  Score=123.82  Aligned_cols=180  Identities=14%  Similarity=0.102  Sum_probs=112.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc----CccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..    ++|++
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l   87 (252)
T 3h7a_A           13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-----AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT   87 (252)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence            799999999999999999999999999876522111     112222357899999999999988877643    78999


Q ss_pred             EEcCCCCcc--------------------chHHH----HHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           77 YDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        77 i~~a~~~~~--------------------~~~~l----~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      ||+||....                    +...+    +..++  +..++|++||...+.           +......| 
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~  156 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR-----------GGSGFAAFA  156 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC-----------CCTTCHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC-----------CCCCCccHH
Confidence            999996321                    12223    33333  557999999987642           11123334 


Q ss_pred             cchhhHHHHHh-------hcCCce-eEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~-~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      .+|...+.+.+       ..++++ ++++||.+..+.....     ....     ........... +.+.+|+|++++.
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-----~~~~-----~~~~~~~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-----REQM-----FGKDALANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-----chhh-----hhhhhhcCCcc-CCCHHHHHHHHHH
Confidence            89998887753       358999 8999999877632111     0000     00001111123 7889999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      ++.++.
T Consensus       226 l~s~~~  231 (252)
T 3h7a_A          226 LYQQPK  231 (252)
T ss_dssp             HHHCCG
T ss_pred             HHhCch
Confidence            998654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.68  E-value=3e-16  Score=123.48  Aligned_cols=188  Identities=18%  Similarity=0.105  Sum_probs=124.1

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCCh-HHHHHHhhc-----c
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSA-----K   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~~~~~~~-----~   71 (265)
                      |||+|+||++++++|+++|++ |++++|++...  ..     ..+...  ..++.++.+|++|+ +++.++++.     .
T Consensus        11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~--~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A           11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPT--AL-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH--HH-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCcEEEEEecCchHH--HH-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            799999999999999999997 99999986421  00     111111  23688999999998 877776653     2


Q ss_pred             CccEEEEcCCCCc------------cchHHHHHh----CC-C----CCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           72 GFDVVYDINGREA------------DEVEPILDA----LP-N----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        72 ~~d~vi~~a~~~~------------~~~~~l~~~----~~-~----~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      ++|++||+||...            .+..+++++    +. .    ..++|++||...+..           ..+...| 
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  152 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------IHQVPVYS  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTSHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----------CCCchHHH
Confidence            7999999999632            123333333    32 1    467999999887521           1122334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCC--Cchh--HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      .+|...+.+.+       ..++++++++||.+.++...  ..+.  ........            ...++.+++|+|++
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~dvA~~  220 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL------------LSHPTQTSEQCGQN  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH------------TTSCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH------------hcCCCCCHHHHHHH
Confidence            89999888763       26899999999999886310  0000  00000000            01234589999999


Q ss_pred             HHHHhcCccccCceEEecCCC
Q 024575          199 FVQVLGNEKASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~~~~  219 (265)
                      ++.+++.. ..|+.|++.++.
T Consensus       221 i~~~~~~~-~~G~~~~v~gG~  240 (254)
T 1sby_A          221 FVKAIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHC-CTTCEEEEETTE
T ss_pred             HHHHHHcC-CCCCEEEEeCCc
Confidence            99988743 458899998873

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.68  E-value=1.2e-15  Score=120.91  Aligned_cols=196  Identities=8%  Similarity=0.070  Sum_probs=130.4

Q ss_pred             CCcccc--chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+  ||++++++|+++|++|++++|+.... +.+.    ....... .++.++.+|++|++++.++++..     .
T Consensus        13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A           13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVH----ELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH----HHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-HHHH----HHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            799988  99999999999999999999975321 1110    0011111 26899999999999888877642     7


Q ss_pred             ccEEEEcCCCCcc------------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +|++||+||....                        +..+++++    ++...++|++||...+.           +..
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  156 (266)
T 3oig_A           88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL-----------VMP  156 (266)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------CCT
T ss_pred             eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-----------cCC
Confidence            8999999986420                        12233444    23446899999987642           111


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ....| .+|...+.+.+       ..+++++.++||.+..+..... .............++         ..+.+.+|+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dv  227 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEV  227 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            23334 89998888753       3589999999999988642211 112222222222221         134568999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      |++++.++....  ..|+.+++.+|...
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence            999999987643  46889999987654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.68  E-value=7.1e-16  Score=121.34  Aligned_cols=196  Identities=16%  Similarity=0.193  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc---------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------   71 (265)
                      |||+|+||++++++|+++|++|+++.++.........    ..+......+.++.+|+++.+++..+++..         
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            8999999999999999999999997655443221111    112222356888999999998887766531         


Q ss_pred             --CccEEEEcCCCCcc--------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           72 --GFDVVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        72 --~~d~vi~~a~~~~~--------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                        .+|++||+||....                    +..++++++.    +..++|++||...+..           ...
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------LPD  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC-----------CTT
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC-----------CCC
Confidence              39999999997321                    1233444432    3458999999876421           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHH-HHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-FFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..+++++.++||.+..+......... .........++         ..+.+++|+|
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  228 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF---------NRLGEVEDIA  228 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc---------CCCCCHHHHH
Confidence            2334 89998888753       35899999999999887532211111 11122222211         2355689999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCc
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      ++++.++...  ...|+.+++.+|..
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             HHHHHHhCcccCCccCCEEEecCCee
Confidence            9999988643  34689999998753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.67  E-value=2.9e-16  Score=125.35  Aligned_cols=202  Identities=15%  Similarity=0.136  Sum_probs=131.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA-----DEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865521110     111111357889999999999888877642     7999


Q ss_pred             EEEcCCCCcc---------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                     +..+++++    ++  +..++|++||...+..         .+..+...
T Consensus       109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~~~~~  179 (283)
T 3v8b_A          109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTPGATA  179 (283)
T ss_dssp             EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCSTTCHH
T ss_pred             EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCCCchH
Confidence            9999996311                     12233343    23  5679999999775311         01112333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCce--eeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+       ..+++++.++||.+..+.........-. .  ..............  ..+...+|+|++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~--~~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-E--TAIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-H--HSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-h--hhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            4 89999888763       3579999999999988753211100000 0  00001111111111  245678999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCC
Q 024575          199 FVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++.++....  ..|+.+++.+|.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHcCccccCCcCCEEEECcCc
Confidence            999986543  368899998874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.67  E-value=1.6e-16  Score=126.70  Aligned_cols=183  Identities=18%  Similarity=0.198  Sum_probs=119.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||+++++.|+++|++|++++|++..... +.    ..+...  ...+.++.+|++|++++.++++..     ++
T Consensus        38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEE-LA----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHH-HH----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998654211 00    011110  135788999999999888777632     79


Q ss_pred             cEEEEcCCCCcc--------------------c----hHHHHHhCC--CC--CcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD--------------------E----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~l~~~~~--~~--~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |+|||+||....                    +    ++.+++.++  +.  .++|++||...+..         .+..+
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~~~  183 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  183 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCCCC
Confidence            999999986321                    1    445566655  43  79999999876421         11222


Q ss_pred             cccc-cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ...| .+|..++.+.+         ..++++++++||.+.++..         ............ .......+++++|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~dv  253 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---------FKLHDKDPEKAA-ATYEQMKCLKPEDV  253 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---------HHHTTTCHHHHH-HHHC---CBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---------hhhcccChhHHh-hhcccccCCCHHHH
Confidence            3335 88998887652         4579999999999987621         000000000000 00011246789999


Q ss_pred             HHHHHHHhcCcc
Q 024575          196 ARAFVQVLGNEK  207 (265)
Q Consensus       196 a~~~~~~~~~~~  207 (265)
                      |++++.++..+.
T Consensus       254 A~~i~~l~~~~~  265 (279)
T 1xg5_A          254 AEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhcCCc
Confidence            999999998754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.67  E-value=2.4e-16  Score=125.33  Aligned_cols=193  Identities=12%  Similarity=0.113  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++.    .++|++
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l  113 (275)
T 4imr_A           39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAV-----QQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL  113 (275)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHH-----HHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence            89999999999999999999999999987653211     112222235789999999999888776653    279999


Q ss_pred             EEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      ||+||....                    +..+++++    ++  +..++|++||...+.           +..+...| 
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~  182 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVVTAYA  182 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCchhhH
Confidence            999996321                    12233333    33  567999999987642           11222234 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHHHHcCC-cccCCCCCCceeeeeeHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .+|...+.+.+       ..+++++.++||.+..+......  ............ ++         .-+...+|+|+++
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v  253 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCcCHHHHHHHH
Confidence            89998888753       35899999999999776210000  001111111110 11         1245689999999


Q ss_pred             HHHhcCcc--ccCceEEecCC
Q 024575          200 VQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (265)
                      +.++....  ..|+.+++.+|
T Consensus       254 ~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          254 LFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHcCcccCCCCCCEEEeCCC
Confidence            99887543  36889999876

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.67  E-value=1.1e-16  Score=125.40  Aligned_cols=191  Identities=13%  Similarity=0.092  Sum_probs=127.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.+....        ...+...++.++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A           12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKA--------AAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--------HHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            7999999999999999999999999998654211        11122357889999999999888877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +..+++++    ++  + ..++|++||...+..           ..+...
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  152 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG-----------TPNMAA  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT-----------CTTCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC-----------CCCchh
Confidence            9999996321                    12223333    43  3 579999999876532           112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|...+.+.+       ..+++++.++||.+..+..................+         ...+...+|+|++++
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~r~~~pedva~~v~  223 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQA---------MKGKGQPEHIADVVS  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSS---------SCSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccc---------cCCCcCHHHHHHHHH
Confidence            4 89988887753       368999999999988753100000000000000011         113456899999999


Q ss_pred             HHhcCcc--ccCceEEecCCC
Q 024575          201 QVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .++....  ..|+.+++.+|.
T Consensus       224 ~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          224 FLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCccccCCCCCEEEECCCc
Confidence            9887643  368899998874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.67  E-value=3e-16  Score=125.27  Aligned_cols=194  Identities=16%  Similarity=0.154  Sum_probs=131.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||+|+||++++++|+++|++|++++|+......        ...++..++.++.+|++|.+++.++++.    .++|++
T Consensus        36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~--------~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA--------LADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            7999999999999999999999999998655211        1112235789999999999988877763    268999


Q ss_pred             EEc-CCCCcc-------------------------chHHHHHhC------------CCCCcEEEEecceeeecCCCCCCC
Q 024575           77 YDI-NGREAD-------------------------EVEPILDAL------------PNLEQFIYCSSAGVYLKSDLLPHC  118 (265)
Q Consensus        77 i~~-a~~~~~-------------------------~~~~l~~~~------------~~~~~~v~~Ss~~~~~~~~~~~~~  118 (265)
                      ||+ ++....                         +..++++++            ++..++|++||...+.        
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  179 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE--------  179 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS--------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC--------
Confidence            999 543210                         112223321            1345899999987642        


Q ss_pred             CCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       119 e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                         +..+...| .+|...+.+.+       ..+++++.++||.+..+.... .............+.        ...+.
T Consensus       180 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~~~~  247 (281)
T 3ppi_A          180 ---GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--------PKRLG  247 (281)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--------SSSCB
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--------CCCCC
Confidence               11223345 89998887752       358999999999987652110 111222222222111        12467


Q ss_pred             eHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +.+|+|++++.++.++...|+.+++.+|..++
T Consensus       248 ~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          248 TPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            89999999999998776779999999987654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.67  E-value=2.7e-15  Score=120.19  Aligned_cols=192  Identities=15%  Similarity=0.139  Sum_probs=126.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCC-CccccCCCCCChhHHh-hhhccceEEEecCCC----hHHHHHHhhc----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSA----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~~~~~----   70 (265)
                      |||+|+||++++++|+++|++|++++|+. +.. ..+.    ..+. ....++.++.+|++|    .+++.++++.    
T Consensus        29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~----~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA-VSLA----DELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHH-HHHH----HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHH-HHHH----HHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            89999999999999999999999999987 331 1110    1111 112468899999999    8888777653    


Q ss_pred             -cCccEEEEcCCCCc----------c-----c-------------------hHHHHHhCC--C------CCcEEEEecce
Q 024575           71 -KGFDVVYDINGREA----------D-----E-------------------VEPILDALP--N------LEQFIYCSSAG  107 (265)
Q Consensus        71 -~~~d~vi~~a~~~~----------~-----~-------------------~~~l~~~~~--~------~~~~v~~Ss~~  107 (265)
                       .++|++||+||...          .     .                   ++.++..++  +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence             27999999998631          1     1                   112233343  2      56899999987


Q ss_pred             eeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccC
Q 024575          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (265)
Q Consensus       108 ~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  179 (265)
                      .+.           +..+...| .+|..++.+.+       ..++++++++||.++++. . . ............++  
T Consensus       184 ~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~~~~~~~~~~~~p~--  247 (288)
T 2x9g_A          184 VDQ-----------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-GEEEKDKWRRKVPL--  247 (288)
T ss_dssp             TTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-CHHHHHHHHHTCTT--
T ss_pred             ccC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-ChHHHHHHHhhCCC--
Confidence            642           11223335 89988887653       358999999999999986 2 1 12122222221111  


Q ss_pred             CCCCCceeee-eeHHHHHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          180 PGSGIQVTQL-GHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       180 ~~~~~~~~~~-i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                       +      .+ ...+|+|++++.++...  ...|+.+.+.+|..
T Consensus       248 -~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          248 -G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             -T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence             1      13 56899999999998753  23678899988754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.66  E-value=1.6e-16  Score=122.53  Aligned_cols=176  Identities=17%  Similarity=0.151  Sum_probs=123.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||+|+||++++++|+++|++|++++|+..                         +|++|++++.++++.. ++|++||+
T Consensus        12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A           12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999988632                         6999999988888643 69999999


Q ss_pred             CCCCc-c--------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchh
Q 024575           80 NGREA-D--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (265)
Q Consensus        80 a~~~~-~--------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (265)
                      ||... .                    +..++++++.    ...++|++||...+..           ..+...| .+|.
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~asK~  135 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------VANTYVKAAINA  135 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------CCCchHHHHHHH
Confidence            99641 1                    1223444422    3358999999876421           1223334 8999


Q ss_pred             hHHHHHh----hc-CCceeEeecceeeCCCCCCch---hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          134 NTESVLE----SK-GVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       134 ~~E~~~~----~~-~~~~~i~r~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      ..+.+.+    +. .++++.++||.+.++......   ...+........+.         ..+.+++|+|++++.+++.
T Consensus       136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHHHccC
Confidence            8888763    22 399999999999887422111   11112222222211         2456799999999999987


Q ss_pred             ccccCceEEecCCCcc
Q 024575          206 EKASRQVFNISGEKYV  221 (265)
Q Consensus       206 ~~~~~~~~~i~~~~~~  221 (265)
                      +...|+.+++.+|..+
T Consensus       207 ~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          207 SYMTGTVIDVDGGALL  222 (223)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCCCcEEEecCCeec
Confidence            6667899999998654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.66  E-value=5.1e-16  Score=122.69  Aligned_cols=173  Identities=17%  Similarity=0.112  Sum_probs=115.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-----REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865521110     11222235789999999999998887764     26999


Q ss_pred             EEEcCCCC-cc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||.. ..                    +..+++++    ++  +..++|++||...+.           +..+...
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  178 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN-----------PVADGAA  178 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC-----------CCTTCHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC-----------CCCCCch
Confidence            99999972 11                    12223333    32  567999999987642           1222333


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|..++.+.+       ..++++++++||.+..+...         ....         ......++..+|+|++++
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~---------~~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV---------GLSA---------KKSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc---------cccc---------ccccccCCCHHHHHHHHH
Confidence            4 89998887753       36899999999998765310         0000         011234668999999999


Q ss_pred             HHhcCcc
Q 024575          201 QVLGNEK  207 (265)
Q Consensus       201 ~~~~~~~  207 (265)
                      .++..+.
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9987654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.66  E-value=3.9e-16  Score=123.25  Aligned_cols=181  Identities=20%  Similarity=0.160  Sum_probs=115.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+.+......     ..+......+.++.+|++|++++.++++..     ++|+
T Consensus        10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A           10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-----TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865521110     112222356888999999999888777642     7999


Q ss_pred             EEEcCCCCcc--------------------chH----HHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..    .++..++  +..++|++||...+..           ......|
T Consensus        85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  153 (264)
T 3tfo_A           85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-----------VPTAAVY  153 (264)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-----------CCCChhH
Confidence            9999997421                    122    2333333  5679999999876421           1122334


Q ss_pred             -cchhhHHHHHh----h-cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          130 -KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       130 -~~k~~~E~~~~----~-~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                       .+|..++.+.+    + .+++++.++||.+..+....         ...........  .....+...+|+|++++.++
T Consensus       154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~---------~~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~  222 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT---------ITHEETMAAMD--TYRAIALQPADIARAVRQVI  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc---------ccchhHHHHHH--hhhccCCCHHHHHHHHHHHh
Confidence             89998887753    2 38999999999987763110         00000000000  01112467999999999999


Q ss_pred             cCccc
Q 024575          204 GNEKA  208 (265)
Q Consensus       204 ~~~~~  208 (265)
                      ..+..
T Consensus       223 s~~~~  227 (264)
T 3tfo_A          223 EAPQS  227 (264)
T ss_dssp             HSCTT
T ss_pred             cCCcc
Confidence            87653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.66  E-value=6.8e-16  Score=120.47  Aligned_cols=175  Identities=11%  Similarity=0.057  Sum_probs=121.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-------cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~~   73 (265)
                      |||+|+||++++++|+++|++|++++|++....               ....++.+|++|++++.++++.       .++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A           13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999876521               2356788999999888877763       379


Q ss_pred             cEEEEcCCCCc-----c----------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           74 DVVYDINGREA-----D----------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        74 d~vi~~a~~~~-----~----------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |++||+||...     .                +...++++    ++...++|++||...+..           ..+...
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------TPGMIG  146 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------CCCchH
Confidence            99999998632     1                11223333    222368999999876521           112333


Q ss_pred             c-cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|...+.+.+         ..++++++++||.+..+.         ........         ....+++.+|+|++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~---------~~~~~~~~---------~~~~~~~~~~vA~~  208 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---------NRKSMPEA---------DFSSWTPLEFLVET  208 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---------HHHHSTTS---------CGGGSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc---------ccccCcch---------hhccCCCHHHHHHH
Confidence            4 89999888763         346999999999886651         11111111         11245678999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCC
Q 024575          199 FVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++.++....  ..|+.+.+.++.
T Consensus       209 v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          209 FHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHhcCCCcCccceEEEEeCCC
Confidence            999886543  357888887654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.66  E-value=1.7e-15  Score=120.55  Aligned_cols=194  Identities=11%  Similarity=0.055  Sum_probs=127.8

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+  |+||+++++.|+++|++|++++|++.. ...+     ..+....+++.++.+|++|++++.++++..     ++
T Consensus        12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A           12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1111     111111134789999999999888777642     68


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+||....                        +..++++++.    ...++|++||...+..           ..+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------MAH  154 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------CCC
Confidence            999999986421                        1223444432    2368999999765321           112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       ..++++++++||.+.++..... .............++         ..+.+.+|+|
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva  225 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  225 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2334 89999888763       3489999999999998752111 011222222221111         1245689999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++++.++....  ..|+.+++.++..
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999986532  3678899988753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.66  E-value=8.8e-16  Score=121.50  Aligned_cols=197  Identities=16%  Similarity=0.152  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-h-hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+.++.....     ..+.. . ..++.++.+|++|++++.++++..     ++
T Consensus        14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A           14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-----SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865521110     11111 1 124889999999999888777642     78


Q ss_pred             cEEEEcCCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~----~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||+||....                    +..++++    .++  +..++|++||...+.           +.....
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  157 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-----------PEPHMV  157 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------CCTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------CCCCch
Confidence            999999997421                    1222333    333  457899999987642           111233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc---------hhHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      .| .+|...+.+.+       ..+++++.++||.+.+|.....         -...+..........+       ...+.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~  230 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-------LGRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-------TCSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-------cCCCc
Confidence            34 89998888753       3589999999999987521000         0000111111110011       12356


Q ss_pred             eHHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ..+|+|++++.++....  ..|+.+++.+|..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            79999999999987532  4688999998754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.65  E-value=1.4e-15  Score=118.09  Aligned_cols=187  Identities=16%  Similarity=0.146  Sum_probs=127.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+...         ...++..+++|++|+++++++++.     .++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---------ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---------TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655322111         135788999999999888877653     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCcccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      +||+||.....                        .+.++..+. +..++|.+||...+..          .+....|..
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~----------~~~~~~Y~a  148 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS----------EPDSEAYAS  148 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC----------CTTCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC----------CCCCHHHHH
Confidence            99999874221                        222333333 4478999999775311          111122338


Q ss_pred             chhhHHHHHh------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          131 GKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       131 ~k~~~E~~~~------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +|..+..+.+      ..+++++.|.||.+-.+... .+    .......-++..         +...+|+|++++.++.
T Consensus       149 sKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-~~----~~~~~~~~Pl~R---------~g~pediA~~v~fL~s  214 (247)
T 3ged_A          149 AKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-EF----TQEDCAAIPAGK---------VGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC----C----CHHHHHTSTTSS---------CBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-HH----HHHHHhcCCCCC---------CcCHHHHHHHHHHHHh
Confidence            8888777653      14899999999998766421 11    122222222221         3358999999999997


Q ss_pred             CccccCceEEecCCCc
Q 024575          205 NEKASRQVFNISGEKY  220 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~  220 (265)
                      ..-..|+.+.+.||..
T Consensus       215 ~~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          215 QDFITGETIIVDGGMS  230 (247)
T ss_dssp             CSSCCSCEEEESTTGG
T ss_pred             CCCCCCCeEEECcCHH
Confidence            6656789999998743

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.65  E-value=9.1e-16  Score=119.23  Aligned_cols=169  Identities=17%  Similarity=0.148  Sum_probs=115.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+.+.....        ......++.++.+|++|++++.++++..     .+|+
T Consensus         9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ--------ELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            79999999999999999999999999986552111        1111236899999999999888777642     6899


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                    +.    +.++..++ ...++|++||...+.           +......| 
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~  149 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV-----------GKANESLYC  149 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS-----------SCSSHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC-----------CCCCCcHHH
Confidence            9999997321                    12    22333333 334999999977642           11122334 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|...+.+.+       ..+++++.++||.+..+....         ...          .....+.+.+|+|++++.+
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------~~~----------~~~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN---------TDH----------VDPSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc---------cCC----------CCCcCCCCHHHHHHHHHHH
Confidence            89999888763       357999999999987763110         000          0112567899999999999


Q ss_pred             hcCcc
Q 024575          203 LGNEK  207 (265)
Q Consensus       203 ~~~~~  207 (265)
                      +.++.
T Consensus       211 ~~~~~  215 (235)
T 3l6e_A          211 LEARS  215 (235)
T ss_dssp             TCCCS
T ss_pred             HhCCC
Confidence            98654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=9e-17  Score=127.73  Aligned_cols=171  Identities=15%  Similarity=0.138  Sum_probs=118.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-----HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            799999999999999999999999999865421110     111111247889999999999888777632     7999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      |||+||....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  180 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-----------VPFLLAY  180 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-----------HHHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------CCCchhH
Confidence            9999986421                    1    222333333  5689999999876521           1122334


Q ss_pred             -cchhhHHHHHh----------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       130 -~~k~~~E~~~~----------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                       .+|..++.+++          ..++++++++||++.++....             ..       .....+++.+|+|++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-------------~~-------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------PS-------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------TH-------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-------------cc-------ccccCCCCHHHHHHH
Confidence             88998887763          237999999999988774211             00       011346789999999


Q ss_pred             HHHHhcCcc
Q 024575          199 FVQVLGNEK  207 (265)
Q Consensus       199 ~~~~~~~~~  207 (265)
                      ++.++.++.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.65  E-value=3.5e-15  Score=116.85  Aligned_cols=188  Identities=15%  Similarity=0.136  Sum_probs=120.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||+++++.|+++|++|++++|+++.... +       ..++..++.++.+|++|++++.++++..     ++|+
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQE-L-------KDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHH-H-------HHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-------HHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            8999999999999999999999999998654211 0       1111246889999999999999888742     6899


Q ss_pred             EEEcCCCCc--c-------------------chHH----HHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREA--D-------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~--~-------------------~~~~----l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||...  .                   +..+    ++..++  +..++|++||...+.           +..+...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~~  146 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGGNV  146 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTTCHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------CCCCCch
Confidence            999998641  0                   1112    233332  568999999987642           1112233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceee-CCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|...+.+.+       ..++++++++||.+. .+.....+..    .  ........    ....+++.+|+|+++
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~----~--~~~~~~~~----~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG----D--DGKAEKTY----QNTVALTPEDVSEAV  216 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC----c--hHHHHHHH----hccCCCCHHHHHHHH
Confidence            4 89999988763       358999999999998 4531100000    0  00000000    011246899999999


Q ss_pred             HHHhcCcc-ccCceEEecC
Q 024575          200 VQVLGNEK-ASRQVFNISG  217 (265)
Q Consensus       200 ~~~~~~~~-~~~~~~~i~~  217 (265)
                      +.++..+. ..++.+.+..
T Consensus       217 ~~l~s~~~~~~g~~i~v~~  235 (248)
T 3asu_A          217 WWVSTLPAHVNINTLEMMP  235 (248)
T ss_dssp             HHHHHSCTTCCCCEEEECC
T ss_pred             HHHhcCCccceeeEEEEcc
Confidence            99987643 3455666554

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.65  E-value=2.3e-15  Score=122.68  Aligned_cols=194  Identities=11%  Similarity=0.050  Sum_probs=129.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEE-cCCCccccCCCCCChhHHh-hhhccceEEEecCCChH----------------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------------   62 (265)
                      |||+|+||+++++.|+++|++|++++ |+.+.... +.    ..+. ....++.++.+|++|.+                
T Consensus        52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANA-LS----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HH----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HH----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            89999999999999999999999999 87543211 10    1111 11246889999999988                


Q ss_pred             -HHHHHhhcc-----CccEEEEcCCCCcc----------------------------------chHHHHHh----CC--C
Q 024575           63 -FVKSSLSAK-----GFDVVYDINGREAD----------------------------------EVEPILDA----LP--N   96 (265)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~a~~~~~----------------------------------~~~~l~~~----~~--~   96 (265)
                       ++.++++..     .+|++||+||....                                  +...++++    +.  +
T Consensus       127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  206 (328)
T 2qhx_A          127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  206 (328)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             887777642     79999999986311                                  01122222    22  3


Q ss_pred             ------CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc
Q 024575           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (265)
Q Consensus        97 ------~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~  162 (265)
                            ..++|++||...+.           +..+...| .+|..++.+.+       ..++++++++||.+.++. . .
T Consensus       207 ~~~~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~  273 (328)
T 2qhx_A          207 AKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M  273 (328)
T ss_dssp             GGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-S
T ss_pred             CcCCCCCcEEEEECchhhcc-----------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-c
Confidence                  57899999987542           11122334 89998888763       358999999999999886 2 2


Q ss_pred             hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCCcc
Q 024575          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      + ...........++.        ..+...+|+|++++.++...  ...|+.+++.+|..+
T Consensus       274 ~-~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          274 P-PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             C-HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             c-HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            2 22222222221111        02456899999999998643  236889999887543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.65  E-value=8.8e-17  Score=127.01  Aligned_cols=202  Identities=11%  Similarity=0.093  Sum_probs=124.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++.|...... .+.+ ....+.....++.++.+|++|++++.++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSD-TANK-LKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHH-HHHH-HHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecCccCHH-HHHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999988643311 0000 00111112356889999999999988877642     7999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhC----CCCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      +||+||....                    +...+++++    ++..++|++||...+.....          ...|..+
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~----------~~~Y~as  164 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF----------YSTYAGN  164 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC----------CCC----
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC----------CchhHHH
Confidence            9999996321                    122333332    24468999999876532111          1224488


Q ss_pred             hhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       132 k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      |...+.+.+       ..+++++.++||.+..+.         .....................+...+|+|++++.++.
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s  235 (262)
T 3ksu_A          165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF---------FYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT  235 (262)
T ss_dssp             -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH---------HHTCC------------CCCCSCCGGGTHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc---------ccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence            998888763       358999999999886642         1100000000001111122346678999999999987


Q ss_pred             Cc-cccCceEEecCCCccCH
Q 024575          205 NE-KASRQVFNISGEKYVTF  223 (265)
Q Consensus       205 ~~-~~~~~~~~i~~~~~~s~  223 (265)
                      .. ...|+.+++.|+.....
T Consensus       236 ~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          236 DGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TTTTCCSCEEEESTTCCCC-
T ss_pred             CCCCccCCEEEECCCccCCC
Confidence            52 23688999998865543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.65  E-value=3.4e-15  Score=118.23  Aligned_cols=179  Identities=17%  Similarity=0.178  Sum_probs=123.3

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc------
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------   71 (265)
                      |||+|+||++++++|+++|   ++|++++|+..... .+     ..+.....++.++.+|++|.+++.++++..      
T Consensus        27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-EL-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HH-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HH-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            7999999999999999999   99999999876521 11     111111357899999999999888877632      


Q ss_pred             -CccEEEEcCCCCc-c--------------------chHHHHHhC----C-C------------CCcEEEEecceeeecC
Q 024575           72 -GFDVVYDINGREA-D--------------------EVEPILDAL----P-N------------LEQFIYCSSAGVYLKS  112 (265)
Q Consensus        72 -~~d~vi~~a~~~~-~--------------------~~~~l~~~~----~-~------------~~~~v~~Ss~~~~~~~  112 (265)
                       ++|++||+||... .                    +..++++++    . .            ..++|++||...+...
T Consensus       101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence             6999999998643 1                    122333332    1 1            4789999998875321


Q ss_pred             CCCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCC
Q 024575          113 DLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI  184 (265)
Q Consensus       113 ~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (265)
                      .        ...+...| .+|..++.+.+       ..+++++++|||.+..+....                       
T Consensus       181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------  229 (267)
T 1sny_A          181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------  229 (267)
T ss_dssp             C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred             C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence            1        11123335 89999988763       258999999999987763110                       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCC
Q 024575          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (265)
                        ..++..+|+++.++.++...  ...|..+.+.++
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence              02356899999999998643  335656655543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.65  E-value=3.8e-16  Score=123.41  Aligned_cols=193  Identities=14%  Similarity=0.203  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421100     111111246888999999999887776532     7999


Q ss_pred             EEEcCCCC-cc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||.. ..                    +..+++++    +.  +..++|++||...+...           .+...
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  156 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCCch
Confidence            99999864 11                    12223333    32  45799999998764211           12233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc------------h--hHH-HHHHHHcCCcccCCCCCCc
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------V--EEW-FFHRLKAGRPIPIPGSGIQ  185 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~------------~--~~~-~~~~~~~~~~~~~~~~~~~  185 (265)
                      | .+|...+.+.+       ..++++++++||.+..+.....            .  ... .........++        
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  228 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------  228 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC--------
Confidence            4 88988777652       4589999999998876521000            0  000 01111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCC
Q 024575          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGE  218 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~  218 (265)
                       ..+...+|+|++++.++....  ..|+.+.+.+|
T Consensus       229 -~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          229 -RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             -SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence             135678999999999886542  35778877764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.64  E-value=3.1e-16  Score=127.35  Aligned_cols=192  Identities=10%  Similarity=0.072  Sum_probs=114.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+.++.....     ..+...  ...+.++.+|++|.+++.++++..     .+
T Consensus        14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A           14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-----ATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876522111     111111  127899999999999888877632     68


Q ss_pred             cEEEEcCCCCc--------------------cchHHHHHhCC------------CCCcEEEEecceeeecCCCCCCCCCC
Q 024575           74 DVVYDINGREA--------------------DEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~l~~~~~------------~~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                      |++||+||...                    .++.++++++.            +..++|++||...+...         
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---------  159 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---------  159 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---------
Confidence            99999999632                    12333333321            24579999998765321         


Q ss_pred             CCCccccccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCC-CceeeeeeH
Q 024575          122 TVDPKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSG-IQVTQLGHV  192 (265)
Q Consensus       122 ~~~~~~~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  192 (265)
                       .....|..+|..++.+.       ...++++++++||.+.++..... .....+............... ......++.
T Consensus       160 -~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  238 (319)
T 3ioy_A          160 -GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP  238 (319)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCH
Confidence             11122348999665553       34689999999999988742111 011110000000000000000 011122789


Q ss_pred             HHHHHHHHHHhcCcc
Q 024575          193 KDLARAFVQVLGNEK  207 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~  207 (265)
                      +|+|+.++.+++.+.
T Consensus       239 e~vA~~~~~al~~~~  253 (319)
T 3ioy_A          239 DVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999998754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.64  E-value=4.8e-15  Score=118.46  Aligned_cols=190  Identities=18%  Similarity=0.228  Sum_probs=124.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh---hHHhhhhccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||++++++|+++|++|++++|+..+.. .+.+...   ..+.....++.++.+|++|++++.++++..     +
T Consensus        15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   93 (285)
T 3sc4_A           15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHP-KLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGG   93 (285)
T ss_dssp             ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCS-SSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhh-hhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999987622 2211111   122222457899999999999888877643     7


Q ss_pred             ccEEEEcCCCCcc--------------------chHHHHH----hCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           73 FDVVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~~~l~~----~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +|++||+||....                    +..++++    .++  +..++|++||...+...         .....
T Consensus        94 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~  164 (285)
T 3sc4_A           94 IDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK---------WLRPT  164 (285)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---------GSCSH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---------CCCCc
Confidence            9999999996421                    1222333    344  45799999997653210         01112


Q ss_pred             ccccchhhHHHHHh-------hcCCceeEeecce-eeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~i~r~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      .|..+|...+.+.+       ..+++++.++||+ +-.+         +......... +       ...+...+|+|++
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~---------~~~~~~~~~~-~-------~~r~~~pedvA~~  227 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA---------AVQNLLGGDE-A-------MARSRKPEVYADA  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH---------HHHHHHTSCC-C-------CTTCBCTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH---------HHHhhccccc-c-------ccCCCCHHHHHHH
Confidence            23489998888753       3689999999984 3322         2222222111 1       1234568999999


Q ss_pred             HHHHhcCcc-ccCceEEecC
Q 024575          199 FVQVLGNEK-ASRQVFNISG  217 (265)
Q Consensus       199 ~~~~~~~~~-~~~~~~~i~~  217 (265)
                      ++.++..+. ..|+.+.+.+
T Consensus       228 ~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          228 AYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHhCCcccccceEEEEcC
Confidence            999997653 3455555544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.64  E-value=1.4e-15  Score=119.54  Aligned_cols=190  Identities=14%  Similarity=0.106  Sum_probs=124.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecC--CChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||+++++.|+++|++|++++|+.+......     ..+... ...+.++.+|+  +|.+++.++++..     +
T Consensus        18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   92 (252)
T 3f1l_A           18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA-----SHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR   92 (252)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865521110     111111 13788999999  8888877776532     7


Q ss_pred             ccEEEEcCCCCcc---------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           73 FDVVYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        73 ~d~vi~~a~~~~~---------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|++||+||....                     +..+++++    ++  +..++|++||...+.           +..+
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  161 (252)
T 3f1l_A           93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ-----------GRAN  161 (252)
T ss_dssp             CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc-----------CCCC
Confidence            9999999996311                     12233333    33  567999999987542           1112


Q ss_pred             cccc-cchhhHHHHHh----h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ...| .+|...+.+.+    +  ..++++.+.||.+..+         +........         ....+...+|++++
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva~~  223 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------MRASAFPTE---------DPQKLKTPADIMPL  223 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------HHHHHCTTC---------CGGGSBCTGGGHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------hhhhhCCcc---------chhccCCHHHHHHH
Confidence            2334 89999888763    2  2389999999987654         111111111         11235678999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCccCHH
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKYVTFD  224 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (265)
                      +++++....  ..|+.+++.+|...++.
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            999987643  46889999998876654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.64  E-value=7.6e-16  Score=119.34  Aligned_cols=170  Identities=14%  Similarity=0.080  Sum_probs=113.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc--CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (265)
                      |||+|+||++++++|+++|++|++++|+++......        .....++.++.+|+++.+++.++++..  ..|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT--------NCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH--------HTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            799999999999999999999999999876522111        111357889999999999999988732  2499999


Q ss_pred             cCCCCcc--------------------chHHHH----HhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cch
Q 024575           79 INGREAD--------------------EVEPIL----DALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (265)
Q Consensus        79 ~a~~~~~--------------------~~~~l~----~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k  132 (265)
                      +||....                    +..+++    ..++ ...++|++||...+..           ..+...| .+|
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK  147 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------KAQESTYCAVK  147 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------CTTCHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------CCCCchhHHHH
Confidence            9986321                    122233    3333 3348999999876421           1223344 899


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      ...+.+.+       ..+++++.++||.+..+..         ....  .       ......+.+.+|+|++++.++.+
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---------~~~~--~-------~~~~~~~~~~~dvA~~i~~l~~~  209 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW---------ETSG--K-------SLDTSSFMSAEDAALMIHGALAN  209 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCE
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHH---------HhcC--C-------CCCcccCCCHHHHHHHHHHHHhC
Confidence            99888763       3589999999998876621         1100  0       01134567899999999999875


Q ss_pred             cc
Q 024575          206 EK  207 (265)
Q Consensus       206 ~~  207 (265)
                      +.
T Consensus       210 ~~  211 (230)
T 3guy_A          210 IG  211 (230)
T ss_dssp             ET
T ss_pred             cC
Confidence            54

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.64  E-value=1.3e-15  Score=118.44  Aligned_cols=186  Identities=18%  Similarity=0.105  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh-hhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+.++.....     ..+. ....++.++.+|++|++++.++++..     ++|
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (235)
T 3l77_A            8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIA-----HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD   82 (235)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999865521111     0111 12357889999999999998887642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      ++||+||....                    +..+++++    ++ +..++|++||...+..          ......|.
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----------~~~~~~Y~  152 (235)
T 3l77_A           83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL----------IPYGGGYV  152 (235)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC----------CTTCHHHH
T ss_pred             EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc----------CCCcchHH
Confidence            99999997321                    12233333    33 3456777766554211          11112234


Q ss_pred             cchhhHHHHHh-----hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          130 KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       130 ~~k~~~E~~~~-----~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      .+|..++.+.+     ..+++++.++||.+..+....               ..  . ......++..+|+|++++.++.
T Consensus       153 ~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~---------------~~--~-~~~~~~~~~p~dva~~v~~l~~  214 (235)
T 3l77_A          153 STKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS---------------KP--G-KPKEKGYLKPDEIAEAVRCLLK  214 (235)
T ss_dssp             HHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC---------------CS--C-CCGGGTCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc---------------cC--C-cccccCCCCHHHHHHHHHHHHc
Confidence            89999888764     358999999999987663110               00  0 0111256789999999999998


Q ss_pred             Cccc--cCceEEecCCC
Q 024575          205 NEKA--SRQVFNISGEK  219 (265)
Q Consensus       205 ~~~~--~~~~~~i~~~~  219 (265)
                      .+..  .+++....+++
T Consensus       215 ~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          215 LPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             SCTTCCCCEEEECCTTS
T ss_pred             CCCCCccceEEEeeccc
Confidence            7653  45555555544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.64  E-value=1.7e-15  Score=119.15  Aligned_cols=193  Identities=14%  Similarity=0.151  Sum_probs=127.3

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Cc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~   73 (265)
                      |||+|+||++++++|+++|  +.|+++.|+..... .+       ......++.++.+|++|++++.++++..     ++
T Consensus         8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~-~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK-KL-------KEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHH-HH-------HHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHH-HH-------HHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            8999999999999999985  78988888765421 11       1112357899999999999888877643     79


Q ss_pred             cEEEEcCCCCcc---------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           74 DVVYDINGREAD---------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        74 d~vi~~a~~~~~---------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      |++||+||....                     +..+++++    ++ ...++|++||...+.           +..+..
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~-----------~~~~~~  148 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM-----------YFSSWG  148 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC-----------SSCCSH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc-----------CCCCcc
Confidence            999999997311                     12233333    23 237999999987642           122233


Q ss_pred             cc-cchhhHHHHHh----h-cCCceeEeecceeeCCCCCCc--------hhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          128 RH-KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       128 ~~-~~k~~~E~~~~----~-~~~~~~i~r~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                      .| .+|...+.+.+    + .+++++.++||.+..+.....        .............+         ...+.+.+
T Consensus       149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~  219 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NNQLLDSS  219 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC----CH
T ss_pred             hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cCCcCCcc
Confidence            45 89999888763    2 489999999999988753111        01122222211111         12456789


Q ss_pred             HHHHHHHHHhcCc---cccCceEEecCCCcc
Q 024575          194 DLARAFVQVLGNE---KASRQVFNISGEKYV  221 (265)
Q Consensus       194 D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (265)
                      |+|++++.++...   ...|+.+++.+++..
T Consensus       220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          220 VPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             cHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            9999999988654   246889998887643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.63  E-value=5e-15  Score=117.51  Aligned_cols=191  Identities=14%  Similarity=0.097  Sum_probs=120.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.. ..++.++.+|++|++++.++++..     .+|+
T Consensus        27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALA-----GELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            899999999999999999999999999865421100     00100 136889999999999999888742     5799


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--CCC-cEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~~~-~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                     +    ++.++..++  +.. ++|++||...+..           ..+..
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~~~~~  169 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------YPGSH  169 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------CCCCc
Confidence            9999986421                     1    222333443  456 9999999876421           11223


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+.+       ..++++++++||.+.++.....+..    .  .........    ...++..+|+|+++
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~----~--~~~~~~~~~----~~~~~~pedvA~~v  239 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG----D--QARYDKTYA----GAHPIQPEDIAETI  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc----c--hHHHHHhhc----cCCCCCHHHHHHHH
Confidence            34 89999988763       3579999999999987742110000    0  000000000    11246899999999


Q ss_pred             HHHhcCcc-ccCceEEecCC
Q 024575          200 VQVLGNEK-ASRQVFNISGE  218 (265)
Q Consensus       200 ~~~~~~~~-~~~~~~~i~~~  218 (265)
                      +.++..+. ..++.+.+.++
T Consensus       240 ~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          240 FWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHTSCTTEEEEEEEEEET
T ss_pred             HHHhCCCccCccceEEEeec
Confidence            99987653 34556666543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.63  E-value=3.8e-16  Score=124.17  Aligned_cols=184  Identities=15%  Similarity=0.066  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|++ .|++|++++|+........     ..+.....++.++.+|++|.+++.++++..     ++|
T Consensus        10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            89999999999999999 8999999999865421110     111111246889999999999888877642     799


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHhCC----CCCcEEEEecceeeecC-C----------CCCCCC
Q 024575           75 VVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKS-D----------LLPHCE  119 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~-~----------~~~~~e  119 (265)
                      +|||+||....                    +..++++++.    ...++|++||...+... .          ..+++|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            99999986421                    1234555533    23589999998776320 0          001111


Q ss_pred             CC-------------------CCCccccc-cchhhHHHHHh-------h----cCCceeEeecceeeCCCCCCchhHHHH
Q 024575          120 TD-------------------TVDPKSRH-KGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWFF  168 (265)
Q Consensus       120 ~~-------------------~~~~~~~~-~~k~~~E~~~~-------~----~~~~~~i~r~~~i~g~~~~~~~~~~~~  168 (265)
                      ++                   ...|...| .+|...|.+++       .    .++++++++||.+.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            10                   11223445 99988887763       2    48999999999988763211       


Q ss_pred             HHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc----ccCceEE
Q 024575          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK----ASRQVFN  214 (265)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~----~~~~~~~  214 (265)
                                        ..+.+.+|+|+.++.++..+.    ..|+.+.
T Consensus       238 ------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 ------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             ------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                              135679999999999987542    2455554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.63  E-value=2.3e-15  Score=117.84  Aligned_cols=181  Identities=18%  Similarity=0.155  Sum_probs=118.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+++.... +.    ..+.....++.++.+|++|++++.++++.     .++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRA-LG----DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211 10    11111124688999999999988877753     27999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +..+++++    +.  + .++|++||...+..           ..+...|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  155 (247)
T 2jah_A           88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------VRNAAVY  155 (247)
T ss_dssp             EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------CCCCcHH
Confidence            9999986321                    12233333    22  4 79999999876421           1122334


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                       .+|...+.+.+       ..++++++++||.+.++......... .......  .  ++    ...+.+.+|+|++++.
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~--~--~~----~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQ--R--IS----QIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHH--H--TT----TSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHh--c--cc----ccCCCCHHHHHHHHHH
Confidence             88988877652       46899999999999887421100011 1111110  1  11    1115789999999999


Q ss_pred             HhcCcc
Q 024575          202 VLGNEK  207 (265)
Q Consensus       202 ~~~~~~  207 (265)
                      ++..+.
T Consensus       227 l~s~~~  232 (247)
T 2jah_A          227 AVTAPH  232 (247)
T ss_dssp             HHHSCT
T ss_pred             HhCCCc
Confidence            987653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.62  E-value=1.8e-15  Score=120.72  Aligned_cols=181  Identities=13%  Similarity=0.121  Sum_probs=118.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhcc-ceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|+.+......     ..+...... +.++.+|++|++++.++++..     ++|
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  113 (281)
T 4dry_A           39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA-----GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD  113 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999865521111     111111122 489999999999888877642     789


Q ss_pred             EEEEcCCCCcc---------------------c----hHHHHHhCC--C--CCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      ++||+||....                     +    ++.++..++  +  ..++|++||...+.           +..+
T Consensus       114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~  182 (281)
T 4dry_A          114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT-----------PRPN  182 (281)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC-----------CCTT
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC-----------CCCC
Confidence            99999987421                     1    222333333  2  46899999977541           1222


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...| .+|...+.+.+       ..+++++.++||.+..+..         ...... .... ........+...+|+|+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---------~~~~~~-~~~~-~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT---------ARMSTG-VLQA-NGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECT-TSCEEECCCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---------hhhcch-hhhh-hhcccccCCCCHHHHHH
Confidence            3335 89998887753       4689999999999877631         111111 0110 01112234678999999


Q ss_pred             HHHHHhcCccc
Q 024575          198 AFVQVLGNEKA  208 (265)
Q Consensus       198 ~~~~~~~~~~~  208 (265)
                      +++.++..+..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999987754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.62  E-value=1.9e-15  Score=120.78  Aligned_cols=191  Identities=12%  Similarity=0.088  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc----
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~----   71 (265)
                      |||+|+||++++++|+++|+   +|+++.|+.+......     ..+...  ..++.++.+|++|++++.++++..    
T Consensus        39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK-----KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999987   9999999865521110     111111  246889999999999999888753    


Q ss_pred             -CccEEEEcCCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCC
Q 024575           72 -GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (265)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~  123 (265)
                       ++|++||+||...                     .+..+++++    ++  +..++|++||...+.           +.
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~  182 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD-----------AY  182 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CC
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC-----------CC
Confidence             6999999999632                     012233333    33  667999999987641           11


Q ss_pred             Cccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeH
Q 024575          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (265)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (265)
                      .....| .+|..++.+.+       ..+++++.++||.+..+...   ..... .......            ...++..
T Consensus       183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~------------~~~p~~p  249 (287)
T 3rku_A          183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEE-QAKNVYK------------DTTPLMA  249 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHH-HHHHHHT------------TSCCEEH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHH-HHHHhhc------------ccCCCCH
Confidence            123335 89998888763       36899999999999886210   00000 0000000            0113379


Q ss_pred             HHHHHHHHHHhcCccc--cCceEEecCCCc
Q 024575          193 KDLARAFVQVLGNEKA--SRQVFNISGEKY  220 (265)
Q Consensus       193 ~D~a~~~~~~~~~~~~--~~~~~~i~~~~~  220 (265)
                      +|+|++++.++..+..  .++.+.+.+++.
T Consensus       250 edvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          250 DDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            9999999999976543  577888887654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.61  E-value=4.8e-15  Score=118.85  Aligned_cols=194  Identities=11%  Similarity=0.061  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEE-cCCCccccCCCCCChhHHh-hhhccceEEEecCCChH----------------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------------   62 (265)
                      |||+|+||+++++.|+++|++|++++ |+.+.... +.    ..+. ....++.++.+|+++.+                
T Consensus        15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANA-LS----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HH----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHH-HH----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            89999999999999999999999999 87544211 10    1111 11246889999999998                


Q ss_pred             -HHHHHhhcc-----CccEEEEcCCCCcc-----------------------c-----------hHHHHHh----CC--C
Q 024575           63 -FVKSSLSAK-----GFDVVYDINGREAD-----------------------E-----------VEPILDA----LP--N   96 (265)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~a~~~~~-----------------------~-----------~~~l~~~----~~--~   96 (265)
                       ++.++++..     ++|++||+||....                       .           ...++++    +.  +
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~  169 (291)
T 1e7w_A           90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  169 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence             887777642     79999999986321                       0           1122222    22  3


Q ss_pred             ------CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc
Q 024575           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (265)
Q Consensus        97 ------~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~  162 (265)
                            ..++|++||...+..           ..+...| .+|...+.+.+       ..+++++.++||.+..+. .  
T Consensus       170 ~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--  235 (291)
T 1e7w_A          170 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--  235 (291)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--
T ss_pred             CCCCCCCcEEEEEechhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--
Confidence                  578999999876421           1122334 89998887753       358999999999987764 1  


Q ss_pred             hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +............++.        .-+...+|+|++++.++....  ..|+.+.+.++..+
T Consensus       236 ~~~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          236 MPPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             SCHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            1122222222211111        024568999999999986532  36788999887543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.61  E-value=8e-15  Score=116.14  Aligned_cols=197  Identities=16%  Similarity=0.117  Sum_probs=130.6

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh-hhhccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+  |+||++++++|+++|++|++++|+.........    ..+. ....++.++.+|++|.+++.++++..     .
T Consensus        26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV----KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHH----HHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHH----HHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999  899999999999999999999998765311110    1111 11357889999999999888877642     7


Q ss_pred             ccEEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           73 FDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +|++||+||....                    +..+++++    ++  +..++|++||...+...         ...+.
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  172 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------FPQEQ  172 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------SSSCC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------CCCCC
Confidence            8999999996321                    12233333    23  56799999997753211         11123


Q ss_pred             ccc-cchhhHHHHHh----h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          127 SRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      ..| .+|...+.+.+    +  ..++++.+.||.+..+... ..............         ....+.+.+|+|+++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~---------~~~r~~~~~dva~~~  242 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-FVPKETQQLWHSMI---------PMGRDGLAKELKGAY  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-GSCHHHHHHHHTTS---------TTSSCEETHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-hCCHHHHHHHHhcC---------CCCCCcCHHHHHhHh
Confidence            335 99999888763    2  2389999999999876421 11122222222211         123466789999999


Q ss_pred             HHHhcCc--cccCceEEecCCCc
Q 024575          200 VQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      +.++...  ...|+.+++.+|..
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGG
T ss_pred             heeecCccccccCCEEEECCcee
Confidence            9998653  34688999998764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.61  E-value=1.4e-14  Score=112.84  Aligned_cols=196  Identities=13%  Similarity=0.122  Sum_probs=129.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|.+|++.+|+++...+..     .++.....++..+++|++|+++++++++.     .++|+
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-----~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A           13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-----QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111     22233346789999999999988877654     27999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                     +    ++.++..+.  +..++|.+||...+-.          .+....|
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~----------~~~~~~Y  157 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG----------GFAGAPY  157 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS----------SSSCHHH
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC----------CCCChHH
Confidence            9999985311                     1    233444443  5678999999875311          1111223


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCch--hHHHHHHHHcC-CcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..+|..+..+.       ...|++++.|.||.+..|......  ........... .++.         -+...+|+|.+
T Consensus       158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~---------R~g~pediA~~  228 (254)
T 4fn4_A          158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS---------RLAEPEDIANV  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC---------CCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC---------CCcCHHHHHHH
Confidence            38888887764       357899999999999876421111  11111111111 1111         13348999999


Q ss_pred             HHHHhcCcc--ccCceEEecCCCc
Q 024575          199 FVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++.++....  ..|+.+.+.||..
T Consensus       229 v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          229 IVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCCEEEeCCCcc
Confidence            999886543  3688999988753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.60  E-value=1.2e-15  Score=121.83  Aligned_cols=193  Identities=17%  Similarity=0.157  Sum_probs=126.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||+|+||++++++|+++|++|++++|+...... +       ......++.++.+|+++.+++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A           11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLRE-L-------EVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H-------HHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH-H-------HHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 1       1112357889999999999888777642     7899


Q ss_pred             EEEcCCCCcc-------------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           76 VYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +||+||....                         +...++++    +. +..++|++||...+.           +...
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  151 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY-----------PNGG  151 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-----------SSSS
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc-----------CCCC
Confidence            9999986310                         11123333    22 336899999977542           1112


Q ss_pred             cccc-cchhhHHHHHh----h--cCCceeEeecceeeCCCCCCch---hH------HHHHHHHcCCcccCCCCCCceeee
Q 024575          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPV---EE------WFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      ...| .+|..++.+.+    +  ..++++.++||.+..+......   ..      ..........++         ..+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  222 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---------GRM  222 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---------SSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---------CCC
Confidence            2335 89999888763    1  2499999999999876421100   00      011111111111         235


Q ss_pred             eeHHHHHHHHHHHhcCcc---ccCceEEecCCCcc
Q 024575          190 GHVKDLARAFVQVLGNEK---ASRQVFNISGEKYV  221 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~~~  221 (265)
                      ...+|+|++++.++.++.   ..|+.+++.+|..+
T Consensus       223 ~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          223 PALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             CCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             CCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            568999999999987332   46889999987643

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.60  E-value=3.2e-16  Score=122.65  Aligned_cols=179  Identities=17%  Similarity=0.181  Sum_probs=107.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHH---HHHhhc-cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSA-KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~---~~~~~~-~~~d~v   76 (265)
                      |||+|+||++++++|++ |+.|++++|++......         .. ..++.++.+|+++.+..   .+.++. .++|++
T Consensus        11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~---------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A           11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAAL---------AE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------HT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHH---------Hh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999988 99999999986552111         11 25688999999887542   222222 269999


Q ss_pred             EEcCCCCcc--------------------c----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           77 YDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        77 i~~a~~~~~--------------------~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      ||+||....                    +    ++.++..++ ...++|++||...+..           ..+...| .
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  148 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP-----------HPGNTIYAA  148 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC-----------CCCchHHHH
Confidence            999997321                    1    222333333 3378999999887532           1122334 9


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...+.+.+       ..++++++++||.+.++....     +....  .       .......+++++|+|++++.++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~--~-------~~~~~~~~~~p~dvA~~i~~l~  214 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQ--G-------TNFRPEIYIEPKEIANAIRFVI  214 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhh--h-------cccccccCCCHHHHHHHHHHHH
Confidence            9999888763       368999999999998873111     11000  0       0011234678999999999999


Q ss_pred             cCccccCceEEec
Q 024575          204 GNEKASRQVFNIS  216 (265)
Q Consensus       204 ~~~~~~~~~~~i~  216 (265)
                      +.+.. +.++++.
T Consensus       215 ~~~~~-~~~~~i~  226 (245)
T 3e9n_A          215 DAGET-TQITNVD  226 (245)
T ss_dssp             TSCTT-EEEEEEE
T ss_pred             cCCCc-cceeeeE
Confidence            88764 5677765

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.60  E-value=1.8e-15  Score=118.62  Aligned_cols=173  Identities=16%  Similarity=0.187  Sum_probs=115.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh---hccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||+|+||++++++|+++|++|++++|+........     ..+...   ..++.++.+|++|.+++.++++.     .+
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A           13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVH-----DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHH-----HHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999875521111     011111   15688999999999988877764     27


Q ss_pred             ccEEEEcCCCCcc-------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           73 FDVVYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        73 ~d~vi~~a~~~~~-------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +|++||+||....                   +...++++    ++  +..++|++||...+..           ..+..
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------FADGG  156 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCTT
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------CCCCc
Confidence            9999999997321                   12223333    33  5679999999775421           11233


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      .| .+|...+.+.+       ..+++++.++||.+..+         +.....  ...       ....+++.+|+|+++
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------~~~~~~--~~~-------~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------MAKKAG--TPF-------KDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------HHHHTT--CCS-------CGGGSBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------hhhhcC--CCc-------ccccCCCHHHHHHHH
Confidence            44 89998887753       35899999999988665         111111  111       123467899999999


Q ss_pred             HHHhcCcc
Q 024575          200 VQVLGNEK  207 (265)
Q Consensus       200 ~~~~~~~~  207 (265)
                      +.++..+.
T Consensus       219 ~~l~s~~~  226 (250)
T 3nyw_A          219 RCLLNLSE  226 (250)
T ss_dssp             HHHHTSCT
T ss_pred             HHHHcCCC
Confidence            99998654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.60  E-value=9.3e-15  Score=116.16  Aligned_cols=184  Identities=18%  Similarity=0.183  Sum_probs=119.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh---hHHhhhhccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|.||++++++|+++|++|++++|+..+.. .+.+...   ..+.....++.++.+|++|++++.++++..     +
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   90 (274)
T 3e03_A           12 TGASRGIGLAIALRAARDGANVAIAAKSAVANP-KLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGG   90 (274)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCT-TSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeccchhhh-hhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999977632 2221111   112222457889999999999888777642     7


Q ss_pred             ccEEEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           73 FDVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +|++||+||....                    +.    +.++..++  +..++|++||...+...         ...+.
T Consensus        91 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~  161 (274)
T 3e03_A           91 IDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA---------WWGAH  161 (274)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH---------HHHHC
T ss_pred             CCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------CCCCC
Confidence            9999999996321                    12    22333333  55799999997754210         01112


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecce-eeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ..| .+|...+.+.+       ..+++++.++||. +-.+.         ... .....         ...+...+|+|+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~---------~~~-~~~~~---------~~~~~~pedvA~  222 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA---------INM-LPGVD---------AAACRRPEIMAD  222 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CCC---------GGGSBCTHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch---------hhh-ccccc---------ccccCCHHHHHH
Confidence            234 89998887753       4689999999995 43331         110 11111         112567899999


Q ss_pred             HHHHHhcCcc--ccCceE
Q 024575          198 AFVQVLGNEK--ASRQVF  213 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~  213 (265)
                      +++.++....  ..|+.+
T Consensus       223 ~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          223 AAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHhCccccccCCeEE
Confidence            9999987643  245555

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.59  E-value=1e-14  Score=112.76  Aligned_cols=193  Identities=18%  Similarity=0.152  Sum_probs=129.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||++.||+++++.|+++|.+|++.+|+..+..       ...+.+...++..+.+|++|++.++++++..++|++||+|
T Consensus        15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A           15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999999754311       1222333467899999999999998888877899999999


Q ss_pred             CCCcc--------------------c----hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchh
Q 024575           81 GREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (265)
Q Consensus        81 ~~~~~--------------------~----~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~  133 (265)
                      |....                    +    .+.++..+.   +..++|.+||...+..          .+....|..+|.
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g----------~~~~~~Y~asKa  157 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG----------GIRVPSYTAAKH  157 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------CSSCHHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC----------CCCChHHHHHHH
Confidence            97422                    1    223333332   3468999999775311          111122338898


Q ss_pred             hHHHHH-------hhcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          134 NTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       134 ~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      .+..+.       ...|++++.|.||.+..|...... .......+.+.-++..         +-..+|+|.++++++..
T Consensus       158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR---------WGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS---------CBCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhCc
Confidence            887764       357899999999998776311000 0111222222223322         33479999999998865


Q ss_pred             cc--ccCceEEecCCC
Q 024575          206 EK--ASRQVFNISGEK  219 (265)
Q Consensus       206 ~~--~~~~~~~i~~~~  219 (265)
                      ..  ..|+.+.+.||.
T Consensus       229 ~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          229 AADYVHGAILNVDGGW  244 (247)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhcCCcCCeEEECccc
Confidence            43  368899988874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.59  E-value=3.8e-14  Score=116.04  Aligned_cols=189  Identities=15%  Similarity=0.127  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh---hHHhhhhccceEEEecCCChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~   72 (265)
                      |||+|.||++++++|+++|++|++++|+..+... +.....   ..+.....++.++.+|++|++++.++++..     +
T Consensus        51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~-l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  129 (346)
T 3kvo_A           51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPK-LLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGG  129 (346)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhh-hHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999876322 221111   122222357889999999999888877643     7


Q ss_pred             ccEEEEcCCCCc--------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           73 FDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +|++||+||...                    .+..+++++    ++  +..++|++||...+...         ...+.
T Consensus       130 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---------~~~~~  200 (346)
T 3kvo_A          130 IDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---------WFKQH  200 (346)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------GTSSS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------CCCCc
Confidence            999999999632                    122333333    34  55799999998764210         01123


Q ss_pred             ccc-cchhhHHHHHh----h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          127 SRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~----~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      ..| .+|..++.+.+    +  .+++++.+.||.+...        .+........+         ...+...+|+|+++
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T--------~~~~~~~~~~~---------~~r~~~pedvA~~v  263 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT--------AAMDMLGGPGI---------ESQCRKVDIIADAA  263 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC--------HHHHHHCC--C---------GGGCBCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc--------HHHHhhccccc---------cccCCCHHHHHHHH
Confidence            334 89998887763    2  5799999999963332        12222211111         12345689999999


Q ss_pred             HHHhcCcc-ccCceEEecC
Q 024575          200 VQVLGNEK-ASRQVFNISG  217 (265)
Q Consensus       200 ~~~~~~~~-~~~~~~~i~~  217 (265)
                      +.++.... ..|+.+ +.+
T Consensus       264 ~~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          264 YSIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHHTSCTTCCSCEE-EHH
T ss_pred             HHHHhcCCCCCceEE-ECC
Confidence            99997732 245555 554

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.59  E-value=1.4e-14  Score=114.09  Aligned_cols=191  Identities=17%  Similarity=0.178  Sum_probs=127.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+.+...        ....++..++..+++|++|+++++++++.     .++|+
T Consensus        35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~--------~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLD--------AAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--------HHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866522        12233346788999999999988877654     26999


Q ss_pred             EEEcCCCCcc--------------------chHHHHHh----CCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+||....                    +...+.++    +++..++|.+||...+-           +......| .
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~-----------~~~~~~~Y~a  175 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST-----------GTPAFSVYAA  175 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS-----------CCTTCHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc-----------CCCCchHHHH
Confidence            9999987421                    12223333    33445799999876531           11112234 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCc------hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      +|..+..+.+       ..|++++.|.||.+..|.....      ....+.......-++..         +...+|+|.
T Consensus       176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~  246 (273)
T 4fgs_A          176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR---------VGRAEEVAA  246 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------CcCHHHHHH
Confidence            8988887653       4689999999999877642111      01112222322223322         234799999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCC
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++++.+..  ..|+.+.+.||.
T Consensus       247 ~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          247 AALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhcCccCCeEeECcCh
Confidence            9999886543  368899998874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.58  E-value=3.4e-14  Score=111.67  Aligned_cols=192  Identities=16%  Similarity=0.117  Sum_probs=118.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHH-Hhhc-cCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSA-KGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~-~~~d~vi~   78 (265)
                      |||+|+||+++++.|+++|++|++++|++..... +.     .+......+..+  |..+.+.+.+ +.+. .++|++||
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~-----~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LE-----AFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HH-----HHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-----HHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            8999999999999999999999999998654211 10     011111233333  5544433222 2211 27999999


Q ss_pred             cCCCC-cc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           79 INGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        79 ~a~~~-~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||.. ..                    +..+++++    ++  +..++|++||...+..           ..+...| .
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~  147 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------WKELSTYTS  147 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------CTTCHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------CCCchHHHH
Confidence            99865 21                    12223333    33  5679999999776421           1122334 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHH-------HHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-------HRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      +|...+.+.+       ..++++++++||.++||.........+.       .......  +       ...+.+.+|+|
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~--p-------~~~~~~p~dvA  218 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT--A-------LQRLGTQKELG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS--S-------SSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC--C-------CCCCcCHHHHH
Confidence            9998887753       3589999999999988753222111111       1111111  1       11356799999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++++.++..+.  ..|+.+++.++..
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcccCCccCCEEEECCCch
Confidence            99999987643  3688999988754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.58  E-value=9e-14  Score=109.14  Aligned_cols=180  Identities=16%  Similarity=0.171  Sum_probs=122.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+..+..               .....+++|+++++++..+++.     .++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           17 TAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------------PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             eccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999765421               3344789999999888776653     26999


Q ss_pred             EEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                      +    ++.++..++  +..++|++||....-.          .+....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----------~~~~~~  151 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----------LPESTT  151 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTTCH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----------CCCccH
Confidence            9999985311                      1    223334443  5678999999764210          011233


Q ss_pred             cc-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHH------------------HHHcCCcccCCC
Q 024575          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH------------------RLKAGRPIPIPG  181 (265)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~------------------~~~~~~~~~~~~  181 (265)
                      +| .+|..++.+.       ...|++++.|.||.+..|.     ...+..                  .....-++.   
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg---  223 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA-----SVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG---  223 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH-----HHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS---
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc-----hhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC---
Confidence            45 8898888765       3578999999999886652     111111                  111111111   


Q ss_pred             CCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          182 SGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       182 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                            -+...+|+|+++++++....  ..|+.+.+.||-
T Consensus       224 ------R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          224 ------RPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             ------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ------CCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence                  24458999999999886433  368899998875

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.58  E-value=5.1e-15  Score=115.42  Aligned_cols=194  Identities=14%  Similarity=0.136  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+..     .++.....++..+++|++|+++++++++.     .++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-----~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-----DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            899999999999999999999999999865522111     12222235788999999999988776654     26999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +    .+.++..+.   +..++|.+||...+.           +......
T Consensus        90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~-----------~~~~~~~  158 (255)
T 4g81_D           90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-----------ARPTVAP  158 (255)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------BCTTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC-----------CCCCchh
Confidence            9999997422                    1    233444442   456899999987531           1111223


Q ss_pred             c-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      | .+|..+..+.       ...|++++.|.||.+..|...... ...+........++..         +...+|+|+++
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~pediA~~v  229 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR---------WGRPEELIGTA  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS---------CBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC---------CcCHHHHHHHH
Confidence            4 8898887765       357899999999999776311000 0111222222222322         33479999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      +.++....  ..|+.+.+.||.
T Consensus       230 ~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          230 IFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCCEEEECCCe
Confidence            99885432  468899998874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.57  E-value=9.7e-14  Score=109.09  Aligned_cols=194  Identities=11%  Similarity=0.084  Sum_probs=126.9

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||+|  .||.++++.|+++|++|++.+|++....+ +.    ..+.+. ..++.++++|+++++++.++++.     .+
T Consensus        12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (256)
T 4fs3_A           12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKE-LE----KLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN   86 (256)
T ss_dssp             ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH----HHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            78876  89999999999999999999998655211 11    111121 24688999999999888776653     27


Q ss_pred             ccEEEEcCCCCcc-------------c-----------hHHHHH----hCCCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD-------------E-----------VEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        73 ~d~vi~~a~~~~~-------------~-----------~~~l~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +|++||++|....             .           ...+..    .+++..++|++||....-           +..
T Consensus        87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-----------~~~  155 (256)
T 4fs3_A           87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-----------AVQ  155 (256)
T ss_dssp             CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS-----------CCT
T ss_pred             CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc-----------Ccc
Confidence            9999999986311             0           001111    122446899999976521           111


Q ss_pred             ccccc-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          125 PKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ....| .+|..++.+.       ...|++++.|.||.+..+.... ...........+.-++..+         ...+|+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~---------g~peev  226 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRN---------VDQVEV  226 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSC---------CCHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCC---------cCHHHH
Confidence            22234 8898887765       3578999999999987764211 1122334444333333322         348999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCC
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      |+++++++.+..  ..|+.+.+.||.
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCH
Confidence            999999886532  368899998874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.57  E-value=1.1e-14  Score=124.33  Aligned_cols=198  Identities=16%  Similarity=0.101  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d~   75 (265)
                      |||+|+||.+++++|+++|++ |++++|+..... ... .....+.....++.++.+|++|.+++.++++..    .+|+
T Consensus       232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~-~~~-~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~  309 (486)
T 2fr1_A          232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDAD-GAG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA  309 (486)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGST-THH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcH-HHH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999985 999999864311 000 001112222346889999999999999988742    4699


Q ss_pred             EEEcCCCCc--------------------cchHHHHHhCC--CCCcEEEEecceee-ecCCCCCCCCCCCCCccccccch
Q 024575           76 VYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~~~~--~~~~~v~~Ss~~~~-~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      |||+||...                    .++.++.+++.  +.++||++||...+ |..           ....|..+|
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~-----------g~~~Yaaak  378 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-----------GLGGYAPGN  378 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-----------TCTTTHHHH
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC-----------CCHHHHHHH
Confidence            999999632                    23556777766  67899999997543 221           112334788


Q ss_pred             hhHHHHH---hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       133 ~~~E~~~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      ..++.+.   +..++++++++||.+.+++....        .. ...+.     .....+++.+|+++++..++..+.. 
T Consensus       379 a~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~--------~~-~~~~~-----~~g~~~i~~e~~a~~l~~~l~~~~~-  443 (486)
T 2fr1_A          379 AYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--------PV-ADRFR-----RHGVIEMPPETACRALQNALDRAEV-  443 (486)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCBC---------------------CT-----TTTEECBCHHHHHHHHHHHHHTTCS-
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCeeCCCcccch--------hH-HHHHH-----hcCCCCCCHHHHHHHHHHHHhCCCC-
Confidence            8887665   45799999999998877642110        00 01111     1235778999999999999987653 


Q ss_pred             CceEEecCCCccCHHHHHHHHH
Q 024575          210 RQVFNISGEKYVTFDGLARACA  231 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~  231 (265)
                        .+.+.   .+.+..+...+.
T Consensus       444 --~~~v~---~~d~~~~~~~~~  460 (486)
T 2fr1_A          444 --CPIVI---DVRWDRFLLAYT  460 (486)
T ss_dssp             --SCEEC---EECHHHHHHHHT
T ss_pred             --eEEEE---eCCHHHHhhhhc
Confidence              12222   256766665443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.56  E-value=8.9e-14  Score=108.84  Aligned_cols=196  Identities=17%  Similarity=0.171  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|.+|++.+|+.+... ..     ..+.+...++.++.+|++|++++.+++++     .++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A           13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FL-----DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HH-----HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HH-----HHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521 11     12233346789999999999888776653     27999


Q ss_pred             EEEcCCCCcc-------------------c----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           76 VYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        76 vi~~a~~~~~-------------------~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      +||+||....                   +    .+.++..++ +..++|.+||...+...          +....|..+
T Consensus        87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~----------~~~~~Y~as  156 (258)
T 4gkb_A           87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ----------GNTSGYCAS  156 (258)
T ss_dssp             EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC----------SSCHHHHHH
T ss_pred             EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC----------CCchHHHHH
Confidence            9999997321                   1    223333444 34689999998764211          111223388


Q ss_pred             hhhHHHHH-------hhcCCceeEeecceeeCCCCCCchh-----HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       132 k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      |..++.+.       ...|++++.|.||.+..|.......     ...........++   +     .-+...+|+|+++
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~v  228 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADTA  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHHH
Confidence            98888765       3578999999999998764211110     0111222222121   1     1234589999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++++....  ..|+.+.+.||..
T Consensus       229 ~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          229 VFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCchhcCccCCeEEECCCcc
Confidence            99886543  4688999988753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.56  E-value=2.4e-14  Score=113.54  Aligned_cols=193  Identities=15%  Similarity=0.079  Sum_probs=123.2

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-------
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------   71 (265)
                      |||  +|+||++++++|+++|++|++++|+..+..+.+.+       ....++.++.+|++|++++.++++..       
T Consensus        13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-------hcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            788  99999999999999999999999986542111110       11246788999999999988877642       


Q ss_pred             -CccEEEEcCCCCcc-------------------------chHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCC
Q 024575           72 -GFDVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        72 -~~d~vi~~a~~~~~-------------------------~~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                       ++|++||+||....                         +...+++++.    ...++|++||...++           
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------  154 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-----------  154 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------
Confidence             79999999986430                         1122333322    235899999865421           


Q ss_pred             CCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc----hhHH-------HHHHHHcCCcccCCCC
Q 024575          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----VEEW-------FFHRLKAGRPIPIPGS  182 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~----~~~~-------~~~~~~~~~~~~~~~~  182 (265)
                       ......| .+|...+.+.+       ..+++++.++||.+..+.....    ....       +........++.    
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----  229 (269)
T 2h7i_A          155 -MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG----  229 (269)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC----
T ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc----
Confidence             1112334 88998887753       3589999999998866520000    0000       001111111110    


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                          +.+...+|+|++++.++....  ..|+.+.+.++..
T Consensus       230 ----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          230 ----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             ----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             ----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence                024457999999999986532  3688898888743

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.56  E-value=1.7e-14  Score=115.41  Aligned_cols=173  Identities=16%  Similarity=0.113  Sum_probs=115.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.... .++.++.+|++|.+++.++++.     .++|
T Consensus        34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999865421110     0111111 2688999999999888877753     2799


Q ss_pred             EEEEc-CCCCcc-------------------chHHHHHh----CC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           75 VVYDI-NGREAD-------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        75 ~vi~~-a~~~~~-------------------~~~~l~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      ++||+ ++....                   +..+++++    ++ +..++|++||...+..           ..+...|
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  177 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------YPMVAAY  177 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------CTTCHHH
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----------CCCccHH
Confidence            99999 554211                   12233333    22 4469999999876421           1123334


Q ss_pred             -cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       130 -~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                       .+|...+.+.+         ..++++++++||.+.++.         ......+         .....+++.+|+|+.+
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---------AMKAVSG---------IVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---------HHHHSCG---------GGGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---------HHHhccc---------cccCCCCCHHHHHHHH
Confidence             88998887652         247999999999886651         1111111         1123567899999999


Q ss_pred             HHHhcCcc
Q 024575          200 VQVLGNEK  207 (265)
Q Consensus       200 ~~~~~~~~  207 (265)
                      +.+++.+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99987754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.55  E-value=3.1e-14  Score=122.12  Aligned_cols=199  Identities=18%  Similarity=0.185  Sum_probs=131.1

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |||+|+||.+++++|.++|+ .|++++|+...... .. .....+.....++.++.+|++|.+++.++++...+|+|||+
T Consensus       265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~  342 (511)
T 2z5l_A          265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG-AA-ELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT  342 (511)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-HH-HHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence            79999999999999999998 58889998643110 00 00011222234688999999999999999985469999999


Q ss_pred             CCCCc--------------------cchHHHHHhCC---CCCcEEEEeccee-eecCCCCCCCCCCCCCccccccchhhH
Q 024575           80 NGREA--------------------DEVEPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKGKLNT  135 (265)
Q Consensus        80 a~~~~--------------------~~~~~l~~~~~---~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~~~~k~~~  135 (265)
                      +|...                    .++.++.+++.   +.++||++||... +|..           ....|..+|..+
T Consensus       343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----------g~~~YaaaKa~l  411 (511)
T 2z5l_A          343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----------GQGAYAAANAAL  411 (511)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----------TBHHHHHHHHHH
T ss_pred             CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----------CCHHHHHHHHHH
Confidence            99632                    13445666665   4679999999754 3211           112344899998


Q ss_pred             HHHHh---hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCce
Q 024575          136 ESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (265)
Q Consensus       136 E~~~~---~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (265)
                      +.+.+   ..++++++++||.+.+.+.......   .....           ....+++.+|+++++..++..+..   .
T Consensus       412 d~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---~  474 (511)
T 2z5l_A          412 DALAERRRAAGLPATSVAWGLWGGGGMAAGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---C  474 (511)
T ss_dssp             HHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---E
T ss_pred             HHHHHHHHHcCCcEEEEECCcccCCcccccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---E
Confidence            88763   5789999999998743332222111   11110           113467899999999999976542   2


Q ss_pred             EEecCCCccCHHHHHHHHHH
Q 024575          213 FNISGEKYVTFDGLARACAK  232 (265)
Q Consensus       213 ~~i~~~~~~s~~el~~~i~~  232 (265)
                      +.+.   .+.+..+...+..
T Consensus       475 v~v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          475 VTVV---DVDWERFAPATNA  491 (511)
T ss_dssp             EEEC---CBCHHHHHHHHHH
T ss_pred             EEEE---eCCHHHHHhhhcc
Confidence            2222   3567777665544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.55  E-value=1.6e-14  Score=113.99  Aligned_cols=184  Identities=16%  Similarity=0.083  Sum_probs=114.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+.....++.++.+|++|++++.++++.      ..+|
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A           11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-----QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            899999999999999999999999999865421110     11111124688999999999888776652      2689


Q ss_pred             EEEEcCCC--C-------------------------ccch----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC
Q 024575           75 VVYDINGR--E-------------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (265)
Q Consensus        75 ~vi~~a~~--~-------------------------~~~~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~  121 (265)
                      ++||+||.  .                         ..+.    +.++..+.  +..++|++||...+..          
T Consensus        86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  155 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY----------  155 (260)
T ss_dssp             EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC----------
T ss_pred             EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC----------
Confidence            99999941  1                         0011    22333333  5679999999876421          


Q ss_pred             CCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                        .+...| .+|...+.+.+       ..++++++++||.+..+.........   .............  ....+...+
T Consensus       156 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~pe  228 (260)
T 2qq5_A          156 --MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKS--AFSSAETTE  228 (260)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHh--hhccCCCHH
Confidence              122334 89999888753       35899999999999877421110000   0000000000000  001135689


Q ss_pred             HHHHHHHHHhcCc
Q 024575          194 DLARAFVQVLGNE  206 (265)
Q Consensus       194 D~a~~~~~~~~~~  206 (265)
                      |+|++++.++..+
T Consensus       229 ~va~~v~~l~s~~  241 (260)
T 2qq5_A          229 LSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHTCT
T ss_pred             HHHHHHHHHhcCc
Confidence            9999999988765

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.53  E-value=4.5e-14  Score=110.48  Aligned_cols=181  Identities=15%  Similarity=0.121  Sum_probs=118.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecC--CChHHHHHHhhcc-----C
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~~~-----~   72 (265)
                      |||+|+||++++++|+++|++|++++|++.......     ..+... ..+..++.+|+  ++.+++.++++..     +
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~   94 (247)
T 3i1j_A           20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVS-----DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR   94 (247)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHH-----HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865521110     111111 14677888887  8888877766532     7


Q ss_pred             ccEEEEcCCCCc---------------------cchHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +|++||+||...                     .+...++++    ++  +..++|++||...+.           +..+
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  163 (247)
T 3i1j_A           95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK-----------GRAN  163 (247)
T ss_dssp             CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------CCCC
Confidence            999999999631                     112233333    34  557999999977542           1122


Q ss_pred             cccc-cchhhHHHHHh-------h-cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|...+.+.+       . .+++++.++||.+..+         +........         ....+...+|++
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva  225 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG---------MRAQAYPDE---------NPLNNPAPEDIM  225 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------HHHHHSTTS---------CGGGSCCGGGGT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------cchhccccc---------CccCCCCHHHHH
Confidence            3334 89998888753       2 5789999999987654         111111111         112345689999


Q ss_pred             HHHHHHhcCcc--ccCceEEe
Q 024575          197 RAFVQVLGNEK--ASRQVFNI  215 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i  215 (265)
                      ++++.++....  ..|+.+++
T Consensus       226 ~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          226 PVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHhCchhccccCeeecC
Confidence            99999886542  34555543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.52  E-value=1.9e-13  Score=115.71  Aligned_cols=192  Identities=16%  Similarity=0.137  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc------Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------~~d   74 (265)
                      |||+|.||.+++++|+++|++|++++|+....  .+     ..... ..++.++.+|++|.+++.++++..      .+|
T Consensus       219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~--~l-----~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          219 TGAARGIGATIAEVFARDGATVVAIDVDGAAE--DL-----KRVAD-KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHH--HH-----HHHHH-HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             eCCchHHHHHHHHHHHHCCCEEEEEeCCccHH--HH-----HHHHH-HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            89999999999999999999999999864321  00     00010 235788999999999888777532      399


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +|||+||....                    +..++.++    +.  +..+||++||...+....          ....|
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~----------g~~~Y  360 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR----------GQTNY  360 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT----------TCHHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC----------CCHHH
Confidence            99999997422                    23334433    23  557899999977642111          11223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+.+       ..++++++++||.+..+.... +............+         ...+...+|+++++++
T Consensus       361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---------l~r~g~pedvA~~v~f  430 (454)
T 3u0b_A          361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATREVGRRLNS---------LFQGGQPVDVAELIAY  430 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBT---------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh-cchhhHHHHHhhcc---------ccCCCCHHHHHHHHHH
Confidence            388987776652       468999999999998764211 00000000011111         1123468999999999


Q ss_pred             HhcCc--cccCceEEecCCCc
Q 024575          202 VLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (265)
                      ++...  ...|+.+++.++..
T Consensus       431 L~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          431 FASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             HHCGGGTTCCSCEEEESSSBS
T ss_pred             HhCCccCCCCCcEEEECCccc
Confidence            88653  24688999988753

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.51  E-value=3.5e-14  Score=110.93  Aligned_cols=189  Identities=14%  Similarity=0.177  Sum_probs=113.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-E--cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHH-HHHhhc-cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA-KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~-~~~d~   75 (265)
                      |||+|+||++++++|+++|++|+++ .  |+++.... +.       .++ .+..+.  |..+.+.+ .++.+. .++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~-~~-------~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQR-FE-------SEN-PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HH-------HHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHH-HH-------HHh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999 5  87544211 00       011 122221  44443332 233322 26999


Q ss_pred             EEEcCCCCcc---c--------------------hHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           76 VYDINGREAD---E--------------------VEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        76 vi~~a~~~~~---~--------------------~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      +||+||....   .                    ..+++++    ++  +..++|++||...+..           ..+.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~  144 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-----------LAYN  144 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTC
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-----------CCCc
Confidence            9999986432   1                    1223333    32  4679999999876421           1122


Q ss_pred             ccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCC--Cchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ..| .+|...+.+.+       ..++++++++||.+..+...  ..+. .......... ..+.       ..+...+|+
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~p~-------~r~~~pe~v  216 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDR-DVPL-------GRLGRPDEM  216 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHH-HCTT-------CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhc-CCCC-------CCCcCHHHH
Confidence            334 89998888753       35899999999998776420  1100 0111111110 0111       135678999


Q ss_pred             HHHHHHHhcCcc--ccCceEEecCCC
Q 024575          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      |++++.++....  ..|+.+.+.++.
T Consensus       217 A~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          217 GALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHcCccccCccCCEEEeCCCC
Confidence            999999987643  357888888764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.47  E-value=3.2e-13  Score=109.13  Aligned_cols=177  Identities=16%  Similarity=0.115  Sum_probs=114.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCCh-HHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY-DFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~-~~~~~~~~~-----~~~   73 (265)
                      |||+|+||++++++|+++|++|++++|+..+.....     ..+... ..++.++.+|++|. +.+..+++.     .++
T Consensus        18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i   92 (311)
T 3o26_A           18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAV-----EKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL   92 (311)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999999876522111     011111 24689999999998 777666542     279


Q ss_pred             cEEEEcCCCCcc--------------------------------------------------c----hHHHHHhCC--CC
Q 024575           74 DVVYDINGREAD--------------------------------------------------E----VEPILDALP--NL   97 (265)
Q Consensus        74 d~vi~~a~~~~~--------------------------------------------------~----~~~l~~~~~--~~   97 (265)
                      |++||+||....                                                  +    ++.++..++  +.
T Consensus        93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~  172 (311)
T 3o26_A           93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS  172 (311)
T ss_dssp             CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence            999999996410                                                  1    222333344  55


Q ss_pred             CcEEEEecceeeecCCCC-------------------------------CCCCCCCC-Cccccc-cchhhHHHHHh----
Q 024575           98 EQFIYCSSAGVYLKSDLL-------------------------------PHCETDTV-DPKSRH-KGKLNTESVLE----  140 (265)
Q Consensus        98 ~~~v~~Ss~~~~~~~~~~-------------------------------~~~e~~~~-~~~~~~-~~k~~~E~~~~----  140 (265)
                      .++|++||...+......                               ...+.... .+...| .+|...+.+.+    
T Consensus       173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  252 (311)
T 3o26_A          173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN  252 (311)
T ss_dssp             CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence            799999997754321000                               00001111 122335 99999998863    


Q ss_pred             h-cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          141 S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       141 ~-~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      + .+++++.++||.+..+...              . .          .....++.++.++.++..+.
T Consensus       253 e~~~i~v~~v~PG~v~T~~~~--------------~-~----------~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          253 KIPKFQVNCVCPGLVKTEMNY--------------G-I----------GNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HCTTSEEEEECCCSBCSGGGT--------------T-C----------CSBCHHHHHHHHHHHHTCCS
T ss_pred             hcCCceEEEecCCceecCCcC--------------C-C----------CCCCHHHHHHHHHHHHhCCC
Confidence            2 3689999999998765210              0 0          11357899999998876553

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.46  E-value=2.3e-13  Score=110.74  Aligned_cols=142  Identities=15%  Similarity=0.100  Sum_probs=100.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh------hccceEEEecCCChHHHHHHhhcc---
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF------SSKILHLKGDRKDYDFVKSSLSAK---   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~---   71 (265)
                      |||+|+||++++++|+++|++|+++.|+..... ...    ..+...      ..++.++.+|++|.+++.++++..   
T Consensus         8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK-TQG----RLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGG-GTH----HHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHH-HHH----HHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            899999999999999999999999988755421 111    111111      146889999999999999888742   


Q ss_pred             CccEEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           72 GFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        72 ~~d~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      .+|++||+||....                    ++.+++++    ++  +..++|++||...+..           ...
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~-----------~~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----------LPF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----------CTT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-----------CCC
Confidence            59999999986321                    12334444    33  6689999999876421           111


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCC
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~  158 (265)
                      ...| .+|..++.+.+       ..++++++++||.+..+.
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            2334 89999988763       368999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.42  E-value=9.7e-13  Score=103.63  Aligned_cols=193  Identities=15%  Similarity=0.105  Sum_probs=116.1

Q ss_pred             CCccccchHHHHHHHHH---cCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhcc----
Q 024575            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~----   71 (265)
                      |||+|+||++++++|++   +|++|++++|+++......     ..+...  ..++.++.+|++|++++.++++..    
T Consensus        12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A           12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            89999999999999999   8999999999865421110     111111  246889999999999888776531    


Q ss_pred             ---Ccc--EEEEcCCCCc---------cc--------------hHHH----HHhCC-C---CCcEEEEecceeeecCCCC
Q 024575           72 ---GFD--VVYDINGREA---------DE--------------VEPI----LDALP-N---LEQFIYCSSAGVYLKSDLL  115 (265)
Q Consensus        72 ---~~d--~vi~~a~~~~---------~~--------------~~~l----~~~~~-~---~~~~v~~Ss~~~~~~~~~~  115 (265)
                         .+|  ++||+||...         ..              ..++    +..++ .   ..++|++||...+.     
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  161 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-----  161 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-----
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-----
Confidence               467  9999998631         11              1122    23333 2   25799999987642     


Q ss_pred             CCCCCCCCCccccc-cchhhHHHHHhh-----cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCc-ccCCCCCCceee
Q 024575          116 PHCETDTVDPKSRH-KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQ  188 (265)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~E~~~~~-----~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  188 (265)
                            +..+...| .+|...+.+.+.     .+++++.++||.+-.+.     ...+.... .... ............
T Consensus       162 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~-----~~~~~~~~-~~~~~~~~~~~~~p~~~  229 (259)
T 1oaa_A          162 ------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM-----QQLARETS-KDPELRSKLQKLKSDGA  229 (259)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH-----HHHHHHHC-SCHHHHHHHHHHHHTTC
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch-----HHHHhhcc-CChhHHHHHHHhhhcCC
Confidence                  11223335 999999887642     24889999999875541     11111000 0000 000000000123


Q ss_pred             eeeHHHHHHHHHHHhcCc-cccCceEEe
Q 024575          189 LGHVKDLARAFVQVLGNE-KASRQVFNI  215 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~-~~~~~~~~i  215 (265)
                      +.+.+|+|++++.++... ...|+.+++
T Consensus       230 ~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          230 LVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             SBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             cCCHHHHHHHHHHHHhhccccCCcEEec
Confidence            567999999999988642 224555544

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.41  E-value=1.3e-12  Score=105.83  Aligned_cols=187  Identities=13%  Similarity=0.104  Sum_probs=111.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcccc-CCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||+|+||+++++.|+++|++|++++|....... .-.........++...-....+|+.+.+++.++++.     .++|
T Consensus        15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   94 (319)
T 1gz6_A           15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   94 (319)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999998764321000 000000000011111111245899998776655432     2699


Q ss_pred             EEEEcCCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeccee-eecCCCCCCCCCCCCCccc
Q 024575           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~~~~--~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~  127 (265)
                      ++||+||....                    +.    +.++..++  +..++|++||... ++..           ....
T Consensus        95 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-----------~~~~  163 (319)
T 1gz6_A           95 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------GQAN  163 (319)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----------CCHH
Confidence            99999996321                    11    22233333  5689999999754 3211           1122


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      |..+|...+.+.+       ..++++++++||.+ .+.. .....                  .....++..+|+|++++
T Consensus       164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-~~~~~------------------~~~~~~~~p~dvA~~~~  223 (319)
T 1gz6_A          164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-ETVMP------------------EDLVEALKPEYVAPLVL  223 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-GGGSC------------------HHHHHHSCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-cccCC------------------hhhhccCCHHHHHHHHH
Confidence            3489998887753       35899999999976 3311 00000                  01123457899999999


Q ss_pred             HHhcCcc-ccCceEEecCC
Q 024575          201 QVLGNEK-ASRQVFNISGE  218 (265)
Q Consensus       201 ~~~~~~~-~~~~~~~i~~~  218 (265)
                      +++..+. ..|+.|++.++
T Consensus       224 ~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          224 WLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHTSTTCCCCSCEEEEETT
T ss_pred             HHhCchhhcCCCEEEECCC
Confidence            9886542 35677777543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.39  E-value=1.5e-12  Score=111.06  Aligned_cols=182  Identities=18%  Similarity=0.149  Sum_probs=120.7

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~   75 (265)
                      |||+|.||.+++++|+++|+ .|++++|+..... ... .....+.....++.++.+|++|.+++.++++.    ..+|+
T Consensus       245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~-~~~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~  322 (496)
T 3mje_A          245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAP-GAA-ELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA  322 (496)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGST-THH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred             ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChH-HHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999998 7888888643311 000 01122222335789999999999999988874    25899


Q ss_pred             EEEcCCCC-c--------------------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           76 VYDINGRE-A--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      |||+||.. .                    .++.++.+++.  ...+||++||...+-..          .....|..+|
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~----------~g~~~YaAaK  392 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS----------GGQPGYAAAN  392 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC----------TTCHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC----------CCcHHHHHHH
Confidence            99999974 1                    13455666655  66799999997653111          1112334888


Q ss_pred             hhHHHHH---hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       133 ~~~E~~~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ..++.+.   +..|+++++|.||.+.+++.....  .....+..           .....+..++.++++..++..+.
T Consensus       393 a~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~--~~~~~l~~-----------~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          393 AYLDALAEHRRSLGLTASSVAWGTWGEVGMATDP--EVHDRLVR-----------QGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHH-----------TTEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCcccCCccccCh--HHHHHHHh-----------cCCCCCCHHHHHHHHHHHHcCCC
Confidence            8887765   457999999999988766432110  00011111           11345678999999999987654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.34  E-value=2.6e-11  Score=97.38  Aligned_cols=197  Identities=10%  Similarity=-0.039  Sum_probs=114.4

Q ss_pred             CCcc--ccchHHHHHHHHHcCCeEEEEEcCC-----------CccccCCCCCChhHHhhhhccceEEEec--------C-
Q 024575            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQQLPGESDQEFAEFSSKILHLKGD--------R-   58 (265)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~D--------~-   58 (265)
                      |||+  |+||++++++|+++|++|++++|++           .+ .+...+...   .........+.+|        + 
T Consensus        14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dv~   89 (297)
T 1d7o_A           14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGK-FDQSRVLPD---GSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTT-TTGGGBCTT---SSBCCEEEEEEECTTCCSGGGSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhH-hhhhhhhcc---ccccccccccccceeccchhhhh
Confidence            7998  9999999999999999999998642           11 111100000   0000001233333        2 


Q ss_pred             ---CC--------hHHHHHHhhc-----cCccEEEEcCCCCc----------------------cchHHHHHhCC----C
Q 024575           59 ---KD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----N   96 (265)
Q Consensus        59 ---~~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~~~~~----~   96 (265)
                         +|        ++++.++++.     .++|++||+||...                      .+..++++++.    .
T Consensus        90 ~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  169 (297)
T 1d7o_A           90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence               22        3344444432     26999999998521                      01223444432    2


Q ss_pred             CCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHh--------hcCCceeEeecceeeCCCCCCc-hhHH
Q 024575           97 LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNP-VEEW  166 (265)
Q Consensus        97 ~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~--------~~~~~~~i~r~~~i~g~~~~~~-~~~~  166 (265)
                      ..++|++||...+...          +.. ..|..+|...+.+.+        ..+++++.++||.+.++..... ....
T Consensus       170 ~g~iv~isS~~~~~~~----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~  239 (297)
T 1d7o_A          170 GGASISLTYIASERII----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT  239 (297)
T ss_dssp             EEEEEEEECGGGTSCC----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHH
T ss_pred             CceEEEEeccccccCC----------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHH
Confidence            3689999997653210          111 124489998887652        2689999999999999863221 1222


Q ss_pred             HHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +........++         ..+..++|+|++++.++....  ..|+.+++.++..
T Consensus       240 ~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          240 MIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            22222221111         124568999999999886532  3578999988753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.32  E-value=1.7e-13  Score=111.46  Aligned_cols=145  Identities=14%  Similarity=0.127  Sum_probs=95.3

Q ss_pred             CCccccchHHHHHHHHHcCC-------eEEEEEcCCCccccCCCCCChhHHhhhh-ccceEEEecCCChHHHHHHhhccC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   72 (265)
                      |||+||+|++++..|++.|+       +|+++++.+....  ..    .....+. ..+.++ .|+.+.+.+.++++  +
T Consensus        10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~--~~----g~~~dl~~~~~~~~-~di~~~~~~~~a~~--~   80 (327)
T 1y7t_A           10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKA--LE----GVVMELEDCAFPLL-AGLEATDDPKVAFK--D   80 (327)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHH--HH----HHHHHHHTTTCTTE-EEEEEESCHHHHTT--T
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhh--cc----chhhhhhccccccc-CCeEeccChHHHhC--C
Confidence            79999999999999999886       8999887642100  00    0000011 122333 67777677778888  9


Q ss_pred             ccEEEEcCCCCc--------------cchHHHHHhCC--C-CC-cEEEEecce-eeecCCCCCCC-CCC-CCCccccc-c
Q 024575           73 FDVVYDINGREA--------------DEVEPILDALP--N-LE-QFIYCSSAG-VYLKSDLLPHC-ETD-TVDPKSRH-K  130 (265)
Q Consensus        73 ~d~vi~~a~~~~--------------~~~~~l~~~~~--~-~~-~~v~~Ss~~-~~~~~~~~~~~-e~~-~~~~~~~~-~  130 (265)
                      +|+|||+|+...              ..+.+++++++  + .+ +++++|+.. +..     +.. +.. ...|...| .
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~~yg~  155 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRNFTAM  155 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGGEEEC
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhheecc
Confidence            999999998642              24667888876  4 44 677776543 000     111 111 23344445 8


Q ss_pred             chhhHHHHH----hhcCCceeEeecceeeCCCC
Q 024575          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (265)
Q Consensus       131 ~k~~~E~~~----~~~~~~~~i~r~~~i~g~~~  159 (265)
                      +|...|+++    +..+++.+++|++++|||+.
T Consensus       156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            999988875    35689999999999999975

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.26  E-value=1.1e-11  Score=106.86  Aligned_cols=201  Identities=14%  Similarity=0.055  Sum_probs=123.0

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEE-EcCCCcccc--------CCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIAQ--------QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l-~r~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   70 (265)
                      |||+|.||.+++++|+++|++ |+++ +|+.....+        .-.......+.....++.++.+|++|.+++.++++.
T Consensus       257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  336 (525)
T 3qp9_A          257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAG  336 (525)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHT
T ss_pred             ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHH
Confidence            899999999999999999987 5555 676432000        000001122233345789999999999999998874


Q ss_pred             c----CccEEEEcCCCCcc--------------------chHHHHHhCC------C-CCcEEEEecceeeecCCCCCCCC
Q 024575           71 K----GFDVVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCE  119 (265)
Q Consensus        71 ~----~~d~vi~~a~~~~~--------------------~~~~l~~~~~------~-~~~~v~~Ss~~~~~~~~~~~~~e  119 (265)
                      .    .+|+|||+||....                    ++.++.+++.      + ..+||++||...+-..       
T Consensus       337 i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~-------  409 (525)
T 3qp9_A          337 VSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG-------  409 (525)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC-------
T ss_pred             HHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC-------
Confidence            2    58999999997321                    2334444432      2 6799999997753111       


Q ss_pred             CCCCCccccccchhhHHHHHh---hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          120 TDTVDPKSRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       120 ~~~~~~~~~~~~k~~~E~~~~---~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                         .....|..+|..++.+.+   ..++++++|.||.+-.+.....   .........           ....+..++++
T Consensus       410 ---~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~---~~~~~~~~~-----------g~~~l~pee~a  472 (525)
T 3qp9_A          410 ---AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEG---ATGERLRRL-----------GLRPLAPATAL  472 (525)
T ss_dssp             ---TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSS---HHHHHHHHT-----------TBCCBCHHHHH
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccch---hhHHHHHhc-----------CCCCCCHHHHH
Confidence               111223488998888763   4689999999998822211011   111111111           12346689999


Q ss_pred             HHHHHHhcCccccCceEEecCCCccCHHHHHHHHH
Q 024575          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (265)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~  231 (265)
                      +++..++..+..  ..  +..  .+.|..+...+.
T Consensus       473 ~~l~~~l~~~~~--~v--~v~--~~dw~~~~~~~~  501 (525)
T 3qp9_A          473 TALDTALGHGDT--AV--TIA--DVDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHHHHTCS--EE--EEC--CBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCC--eE--EEE--eCCHHHHHhhcc
Confidence            999999977542  11  222  356666655443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.24  E-value=7.8e-11  Score=95.93  Aligned_cols=142  Identities=7%  Similarity=-0.066  Sum_probs=89.2

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCC---------Cc---cccCCCCCChhHHhhhhccceEEEecCCCh--H--
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK---------AP---IAQQLPGESDQEFAEFSSKILHLKGDRKDY--D--   62 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~--   62 (265)
                      |||++  .||.+++++|+++|++|++.+|++         .+   ........     ......+.++.+|+++.  +  
T Consensus         8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK-----DKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSS-----SCBCCEEEEEECCTTCSSGGGC
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhh-----cccccccccccccccccchhhh
Confidence            68764  999999999999999999887664         11   00000000     00013467888888776  5  


Q ss_pred             ----------------HHHHHhhc-----cCccEEEEcCCCCc--c--------------------chHHHHHh----CC
Q 024575           63 ----------------FVKSSLSA-----KGFDVVYDINGREA--D--------------------EVEPILDA----LP   95 (265)
Q Consensus        63 ----------------~~~~~~~~-----~~~d~vi~~a~~~~--~--------------------~~~~l~~~----~~   95 (265)
                                      ++.++++.     ..+|++||+||...  .                    +...+.++    ++
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            66555543     26999999998521  0                    12223333    33


Q ss_pred             CCCcEEEEecceeeecCCCCCCCCCCCCCcc-ccccchhhHHHHH-------hh-cCCceeEeecceeeCC
Q 024575           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVL-------ES-KGVNWTSLRPVYIYGP  157 (265)
Q Consensus        96 ~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~-~~~~~k~~~E~~~-------~~-~~~~~~i~r~~~i~g~  157 (265)
                      ...++|++||...+..          .+... .|..+|...+.+.       .. .+++++.+.||.+..+
T Consensus       163 ~~g~Iv~isS~~~~~~----------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          163 PQSSIISLTYHASQKV----------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hCCeEEEEeCccccCC----------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            2268999999775311          11111 3448898887765       24 6999999999988664

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.15  E-value=5.5e-11  Score=104.46  Aligned_cols=207  Identities=13%  Similarity=0.051  Sum_probs=115.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCC-ChhHHhhhhccceEEEecCCChHHHHHHhhcc-----Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   74 (265)
                      |||+|.||++++++|+++|++|++++|............ ......++......+.+|+.|.+++.++++..     .+|
T Consensus        25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~iD  104 (613)
T 3oml_A           25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVD  104 (613)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC----------
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHCCCCc
Confidence            899999999999999999999999988432211000000 00111111111122458999988877776532     689


Q ss_pred             EEEEcCCCCcc--------------------chHHHHHh----CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~~----~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +..+++++    ++  +..++|++||...+...          .....|
T Consensus       105 iLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~----------~~~~~Y  174 (613)
T 3oml_A          105 ILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN----------FGQVNY  174 (613)
T ss_dssp             CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC----------TTCHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----------CCChHH
Confidence            99999997421                    12233333    33  55799999997654211          111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|..++.+.+       ..+++++.+.||.+ .+.. ....                  .......+..+|+|.+++.
T Consensus       175 ~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~-~~~~------------------~~~~~~~~~pedvA~~v~~  234 (613)
T 3oml_A          175 TAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMT-EGIL------------------PDILFNELKPKLIAPVVAY  234 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------CCCC------------------CHHHHTTCCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhh-hhcc------------------chhhhhcCCHHHHHHHHHH
Confidence            489988887753       45899999999853 1110 0000                  0011223468999999999


Q ss_pred             HhcCcc-ccCceEEecCC--------------------CccCHHHHHHHHHHHhCCC
Q 024575          202 VLGNEK-ASRQVFNISGE--------------------KYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       202 ~~~~~~-~~~~~~~i~~~--------------------~~~s~~el~~~i~~~~g~~  237 (265)
                      ++.... ..|+.+++.+|                    ...+..++.+.+.+.....
T Consensus       235 L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~  291 (613)
T 3oml_A          235 LCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS  291 (613)
T ss_dssp             TTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred             hcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence            886542 25667766543                    1245666666666665544

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.14  E-value=1.6e-10  Score=93.66  Aligned_cols=208  Identities=12%  Similarity=-0.045  Sum_probs=98.7

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCC----------CccccCCCCC-------ChhHHhhhh---ccceEEEec-
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK----------APIAQQLPGE-------SDQEFAEFS---SKILHLKGD-   57 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~----------~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~D-   57 (265)
                      |||  +|+||+++++.|+++|++|++++|++          ..........       ...++....   ....++.+| 
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   94 (319)
T 2ptg_A           15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDA   94 (319)
T ss_dssp             ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCT
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccccc
Confidence            687  89999999999999999999998742          0000100000       000000000   012444444 


Q ss_pred             -----------CCC--------hHHHHHHhhc-----cCccEEEEcCCCCc----------------------cchHHHH
Q 024575           58 -----------RKD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPIL   91 (265)
Q Consensus        58 -----------~~~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~   91 (265)
                                 ++|        ++++.++++.     .++|++||+||...                      .+...++
T Consensus        95 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  174 (319)
T 2ptg_A           95 VFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLL  174 (319)
T ss_dssp             TCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHH
Confidence                       222        2344444432     27999999998431                      0122333


Q ss_pred             HhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHh-------h-cCCceeEeecceeeCCC
Q 024575           92 DALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPL  158 (265)
Q Consensus        92 ~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~  158 (265)
                      +++.    ...++|++||...+...          ... ..|..+|..++.+.+       . .+++++.++||.+..+.
T Consensus       175 ~~~~~~m~~~g~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          175 QHFLPLMKEGGSALALSYIASEKVI----------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             HHHGGGEEEEEEEEEEEECC----------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             HHHHHHHhcCceEEEEecccccccc----------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            3322    23689999997754211          111 124488887777642       2 68999999999987763


Q ss_pred             CCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      ... ........... ..............+...+|+|+++++++...  ...|+.+.+.++..
T Consensus       245 ~~~-~~~~~~~~~~~-~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          245 ASA-IGKAGDKTFID-LAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             hhh-cccccchhhHH-HHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            110 00000000000 00000000001123567899999999988653  24688999988754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.14  E-value=4.9e-10  Score=90.66  Aligned_cols=196  Identities=14%  Similarity=0.025  Sum_probs=111.0

Q ss_pred             CCc--cccchHHHHHHHHHcCCeEEEEEcCCC-------ccccCCCCCChhHHhhh-hc----cceEEEec---------
Q 024575            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEF-SS----KILHLKGD---------   57 (265)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~-------~~~~~~~~~~~~~~~~~-~~----~~~~~~~D---------   57 (265)
                      |||  +|+||+++++.|+++|++|++++|++.       .....+.     ...+. ..    .+.++.+|         
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   89 (315)
T 2o2s_A           15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLD-----EDRKLPDGSLIEFAGVYPLDAAFDKPEDV   89 (315)
T ss_dssp             ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTH-----HHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred             eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhh-----hhhhhhccccccccccccccccccccchh
Confidence            688  899999999999999999999987531       0000000     00000 01    12344443         


Q ss_pred             ---CCC--------hHHHHHHhhc-----cCccEEEEcCCCCc----------------------cchHHHHHhCC----
Q 024575           58 ---RKD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----   95 (265)
Q Consensus        58 ---~~~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~~~~~----   95 (265)
                         ++|        ++++.++++.     .++|++||+||...                      .+...+++++.    
T Consensus        90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  169 (315)
T 2o2s_A           90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN  169 (315)
T ss_dssp             CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred             hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence               332        3344444432     26999999998531                      01223444432    


Q ss_pred             CCCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHh-------h-cCCceeEeecceeeCCCCC------
Q 024575           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNY------  160 (265)
Q Consensus        96 ~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~-------~-~~~~~~i~r~~~i~g~~~~------  160 (265)
                      ...++|++||...+...          ... ..|..+|..++.+.+       . .+++++.++||.+..+...      
T Consensus       170 ~~g~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~  239 (315)
T 2o2s_A          170 EGGSAVTLSYLAAERVV----------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG  239 (315)
T ss_dssp             EEEEEEEEEEGGGTSCC----------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS
T ss_pred             cCCEEEEEecccccccC----------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc
Confidence            23689999997753210          111 124488988887652       2 6899999999988664200      


Q ss_pred             -CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCCc
Q 024575          161 -NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                       ..+...+........++         ..+...+|+|+++++++...  ...|+.+.+.++..
T Consensus       240 ~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          240 EKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             SSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence             00001111111111111         12456899999999988643  23688898888753

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.08  E-value=7.7e-10  Score=99.82  Aligned_cols=183  Identities=17%  Similarity=0.145  Sum_probs=117.9

Q ss_pred             CCccccchHHHHHHHH-HcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc----Ccc
Q 024575            1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d   74 (265)
                      |||+|.+|.+++++|. ++|. .|++++|+...... .. ....++.....++.++.||++|.+++.++++..    .+|
T Consensus       536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~-~~-~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id  613 (795)
T 3slk_A          536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASG-AA-ELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT  613 (795)
T ss_dssp             ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred             ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHH-HH-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence            7999999999999999 7898 58899998443111 00 001122222356889999999999999888642    589


Q ss_pred             EEEEcCCCC--------------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchh
Q 024575           75 VVYDINGRE--------------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (265)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~  133 (265)
                      ++||+||..                    ..++.++.+++. .. +||++||...+-..          .....|..+|.
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~----------~g~~~YaAaka  682 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGS----------GGQGNYAAANS  682 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTC----------SSCHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCC----------CCCHHHHHHHH
Confidence            999999873                    334667777765 44 89999997753211          11123447887


Q ss_pred             hHHHHH---hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc
Q 024575          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (265)
Q Consensus       134 ~~E~~~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (265)
                      ..+.+.   +..|++++.|.||.+-.++..............+..           ...+..++..+.+..++..+.
T Consensus       683 ~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          683 FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHhCCC
Confidence            776654   457999999999987655311111111111111111           233457888888888887654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.03  E-value=2.1e-09  Score=94.16  Aligned_cols=201  Identities=13%  Similarity=0.127  Sum_probs=125.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecC-CChHHH-HHHhhc-cCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFV-KSSLSA-KGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~-~~~~~~-~~~d~vi   77 (265)
                      |||++.||+++++.|+++|++|++.+|.....   .    ...+......+..+.+|+ .+.+.+ .++.+. .++|++|
T Consensus       328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~---~----~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK---T----VDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH---H----HHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH---H----HHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            89999999999999999999999987632210   0    011211123566778888 555443 333322 2699999


Q ss_pred             EcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        78 ~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      |+||....                    +    ++.++..++  +..++|++||...+-.          .+....|..+
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~----------~~~~~~Y~as  470 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG----------NFGQANYSSS  470 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC----------CTTBHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC----------CCCChhHHHH
Confidence            99996321                    1    233444443  4468999999764311          1111234488


Q ss_pred             hhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       132 k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      |..+..+.       ...|++++.|.||. ..+.     .....    ...          .......+|++.++++++.
T Consensus       471 Kaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m-----~~~~~----~~~----------~~~~~~pe~vA~~v~~L~s  530 (604)
T 2et6_A          471 KAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM-----TLSIM----REQ----------DKNLYHADQVAPLLVYLGT  530 (604)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------CCSSCGGGTHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc-----ccccC----chh----------hccCCCHHHHHHHHHHHhC
Confidence            98887764       35689999999983 2221     11000    000          0123468999999998875


Q ss_pred             Ccc-ccCceEEecCC-----------------CccCHHHHHHHHHHHhCCCc
Q 024575          205 NEK-ASRQVFNISGE-----------------KYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ~~~-~~~~~~~i~~~-----------------~~~s~~el~~~i~~~~g~~~  238 (265)
                      ... ..|+.+.+.++                 ..++..++.+.+.+......
T Consensus       531 ~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  582 (604)
T 2et6_A          531 DDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT  582 (604)
T ss_dssp             TTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred             CccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence            432 46777777665                 34789999999998887654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.91  E-value=3.3e-09  Score=98.73  Aligned_cols=190  Identities=11%  Similarity=0.073  Sum_probs=112.2

Q ss_pred             CCcccc-chHHHHHHHHHcCCeEEEEE-cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc--------
Q 024575            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (265)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------   70 (265)
                      |||+|. ||.++++.|++.|++|++++ |+.........+ ...........+.++.+|++|.+++.++++.        
T Consensus       482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~e-L~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~  560 (1688)
T 2pff_A          482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS-IYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  560 (1688)
T ss_dssp             CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHH-TTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSS
T ss_pred             ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHH-HHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccc
Confidence            899998 99999999999999999985 544332111000 0000000024678899999999888877652        


Q ss_pred             -c--CccEEEEcCCCCccc-----------------------hHHHHHh------CC--CCCcEEEEecceeeecCCCCC
Q 024575           71 -K--GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLP  116 (265)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~l~~~------~~--~~~~~v~~Ss~~~~~~~~~~~  116 (265)
                       .  .+|++||+||.....                       ...++++      ++  +..+||++||......     
T Consensus       561 GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----  635 (1688)
T 2pff_A          561 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  635 (1688)
T ss_dssp             SCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----
Confidence             2  489999999863211                       1112222      22  2258999998654210     


Q ss_pred             CCCCCCCCccccccchhhHHHHH-h---h---cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeee
Q 024575          117 HCETDTVDPKSRHKGKLNTESVL-E---S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       117 ~~e~~~~~~~~~~~~k~~~E~~~-~---~---~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                             ....|..+|..++.+. +   +   ..++++.+.||++.+.......      .. ......     .....+
T Consensus       636 -------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~------e~-~~~~l~-----~iplR~  696 (1688)
T 2pff_A          636 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN------NI-IAEGIE-----KMGVRT  696 (1688)
T ss_dssp             -------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT------TT-CSTTTS-----SSSCCC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc------hH-HHHHHH-----hCCCCC
Confidence                   1223449999999873 1   1   1288899999988742211100      00 000000     011123


Q ss_pred             eeHHHHHHHHHHHhcCcc---ccCceEEe
Q 024575          190 GHVKDLARAFVQVLGNEK---ASRQVFNI  215 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~---~~~~~~~i  215 (265)
                      ...+|+|++++.++....   ..|+.+.+
T Consensus       697 ~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          697 FSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             CCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            468999999999887651   24566655

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.86  E-value=4.8e-09  Score=87.31  Aligned_cols=82  Identities=6%  Similarity=-0.076  Sum_probs=59.1

Q ss_pred             CCccccchHH--HHHHHHHcCCeEEEEEcCCCccccCCC-------CCChhHHhhhhccceEEEecCCChHHHHHHhhc-
Q 024575            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (265)
Q Consensus         1 tGatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-   70 (265)
                      |||++.||.+  +++.|.+.|++|+++.|+.........       +............+..+.+|++|.+++.++++. 
T Consensus        66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i  145 (418)
T 4eue_A           66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI  145 (418)
T ss_dssp             ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            7999999999  999999999999999998665322110       000111122234688899999999887776653 


Q ss_pred             ----cCccEEEEcCCC
Q 024575           71 ----KGFDVVYDINGR   82 (265)
Q Consensus        71 ----~~~d~vi~~a~~   82 (265)
                          .++|++||+||.
T Consensus       146 ~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          146 KDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHTTCCEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCcc
Confidence                268999999886

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.84  E-value=6.6e-09  Score=85.97  Aligned_cols=149  Identities=13%  Similarity=-0.022  Sum_probs=96.0

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCCccccCCCC-------CChhHHhhhhccceEEEecCCChHHHHHHhhc--
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   70 (265)
                      |||++.||.++++.|++ .|++|+++.|+..........       .....+......+..+.+|++|++++.++++.  
T Consensus        67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  146 (422)
T 3s8m_A           67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK  146 (422)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999987653221100       00011222234678899999999887665542  


Q ss_pred             ----cCccEEEEcCCCC-----------------c----------------------cc-------------h---HHHH
Q 024575           71 ----KGFDVVYDINGRE-----------------A----------------------DE-------------V---EPIL   91 (265)
Q Consensus        71 ----~~~d~vi~~a~~~-----------------~----------------------~~-------------~---~~l~   91 (265)
                          .++|++||+||..                 .                      ..             .   ..++
T Consensus       147 ~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~  226 (422)
T 3s8m_A          147 TEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWI  226 (422)
T ss_dssp             HHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHH
Confidence                2689999998751                 0                      00             0   0222


Q ss_pred             HhC-----C-CCCcEEEEecceeeecCCCCCCCCCCCCC-ccccccchhhHHHHH-------hhcCCceeEeecceeeCC
Q 024575           92 DAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (265)
Q Consensus        92 ~~~-----~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~-~~~~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~  157 (265)
                      .++     . +..++|.+||....-.         .+.. ...|..+|..++.+.       ...|++++.+.||.+-.+
T Consensus       227 ~a~~~~~m~~~gG~IVniSSi~g~~~---------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~  297 (422)
T 3s8m_A          227 DALEGAGVLADGARSVAFSYIGTEIT---------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ  297 (422)
T ss_dssp             HHHHHTTCEEEEEEEEEEEECCCGGG---------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred             HHHHHHHHhhCCCEEEEEeCchhhcc---------CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence            221     1 2357999998764210         0000 022348898888765       346899999999998876


Q ss_pred             C
Q 024575          158 L  158 (265)
Q Consensus       158 ~  158 (265)
                      .
T Consensus       298 ~  298 (422)
T 3s8m_A          298 A  298 (422)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.81  E-value=1.1e-08  Score=97.83  Aligned_cols=201  Identities=12%  Similarity=0.060  Sum_probs=117.6

Q ss_pred             CCcccc-chHHHHHHHHHcCCeEEEEE-cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc--------
Q 024575            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (265)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------   70 (265)
                      |||+|. ||.++++.|++.|++|++++ |+.... ....+.....+......+.++.+|++|.+++.++++.        
T Consensus       681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l-~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~  759 (1887)
T 2uv8_A          681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV-TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  759 (1887)
T ss_dssp             ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHH-HHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHH-HHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999985 544331 1110000000000124688999999999988877652        


Q ss_pred             -c--CccEEEEcCCCCccc-----------------------hHHHHHhC---C-----CCCcEEEEecceeeecCCCCC
Q 024575           71 -K--GFDVVYDINGREADE-----------------------VEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP  116 (265)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~l~~~~---~-----~~~~~v~~Ss~~~~~~~~~~~  116 (265)
                       .  .+|++||+||.....                       ...++.++   .     +..++|++||...+..     
T Consensus       760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----  834 (1887)
T 2uv8_A          760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  834 (1887)
T ss_dssp             SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence             1  499999999964221                       11222322   1     2258999998764311     


Q ss_pred             CCCCCCCCccccccchhhHHHH-Hh----hc--CCceeEeecceeeC-CCCC-CchhHHHHHHHHcCCcccCCCCCCcee
Q 024575          117 HCETDTVDPKSRHKGKLNTESV-LE----SK--GVNWTSLRPVYIYG-PLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVT  187 (265)
Q Consensus       117 ~~e~~~~~~~~~~~~k~~~E~~-~~----~~--~~~~~i~r~~~i~g-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (265)
                             ....|..+|..++.+ .+    +.  .++++.+.||++.+ +... .....    .....  .+        .
T Consensus       835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~--~p--------l  893 (1887)
T 2uv8_A          835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGIEK--MG--------V  893 (1887)
T ss_dssp             -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTH----HHHHT--TS--------C
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHH----HHHHh--cC--------C
Confidence                   112344899888887 21    11  28999999999984 3211 01111    11111  11        1


Q ss_pred             eeeeHHHHHHHHHHHhcCc---cccCceEEec--CCCc--cCHHHHHH
Q 024575          188 QLGHVKDLARAFVQVLGNE---KASRQVFNIS--GEKY--VTFDGLAR  228 (265)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~--~~~~--~s~~el~~  228 (265)
                      .+...+|+|++++.++...   ...|+.+.+.  +|..  ..+.++..
T Consensus       894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~  941 (1887)
T 2uv8_A          894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTA  941 (1887)
T ss_dssp             CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHH
Confidence            2347899999999988654   1235666653  5432  34444443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.81  E-value=3.6e-08  Score=86.43  Aligned_cols=203  Identities=11%  Similarity=0.071  Sum_probs=117.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-----cCCCCCChhHHhhhhccceEEEecCCChHHHHHHh----hc-
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-----QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA-   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----~~-   70 (265)
                      |||++.||+++++.|+++|++|++.+|+.....     +...+ ...++..  .+-. ..+|+.|.++..+++    +. 
T Consensus        14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~-~~~~i~~--~g~~-~~~d~~d~~~~~~~v~~~~~~~   89 (604)
T 2et6_A           14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADV-VVDEIVK--NGGV-AVADYNNVLDGDKIVETAVKNF   89 (604)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHH-HHHHHHH--TTCE-EEEECCCTTCHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHH-HHHHHHh--cCCe-EEEEcCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999987652100     00000 0011111  1112 235666654333322    22 


Q ss_pred             cCccEEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           71 KGFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      ..+|++||+||....                    +    ++.++..++  +..++|++||...+-.          .+.
T Consensus        90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~----------~~~  159 (604)
T 2et6_A           90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG----------NFG  159 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----------CTT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC----------CCC
Confidence            269999999996321                    1    223344443  4568999999764311          011


Q ss_pred             ccccccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          125 PKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ...|..+|..+..+.       ...|++++.|.|+ +..     .+    ..... ..         ........+|++.
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T-----~m----~~~~~-~~---------~~~~~~~pe~vA~  219 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS-----RM----TESIM-PP---------PMLEKLGPEKVAP  219 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC-----HH----HHTTS-CH---------HHHTTCSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC-----cc----ccccC-Ch---------hhhccCCHHHHHH
Confidence            123448898887765       3568999999996 211     11    11000 00         0011246899999


Q ss_pred             HHHHHhcCcc-ccCceEEecCC------------------CccCHHHHHHHHHHHhCCC
Q 024575          198 AFVQVLGNEK-ASRQVFNISGE------------------KYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       198 ~~~~~~~~~~-~~~~~~~i~~~------------------~~~s~~el~~~i~~~~g~~  237 (265)
                      +++.++.... ..|+.+.+.++                  ..++..++.+.+.+.....
T Consensus       220 ~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  278 (604)
T 2et6_A          220 LVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYD  278 (604)
T ss_dssp             HHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCC
T ss_pred             HHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchh
Confidence            9999886542 24667776654                  3467888988888776443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.80  E-value=2e-08  Score=96.03  Aligned_cols=204  Identities=10%  Similarity=0.029  Sum_probs=119.6

Q ss_pred             CCcccc-chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-------c-
Q 024575            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K-   71 (265)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~-   71 (265)
                      |||+|. ||.++++.|++.|++|++++++...............+......+.++.+|++|.+++.++++.       . 
T Consensus       658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G  737 (1878)
T 2uv9_A          658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLG  737 (1878)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCC
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccC
Confidence            799998 9999999999999999998654332111000000000001124688899999999988877752       2 


Q ss_pred             -CccEEEEcCCCCccc-----------------------hHHHHHh------CC--CCCcEEEEecceeeecCCCCCCCC
Q 024575           72 -GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCE  119 (265)
Q Consensus        72 -~~d~vi~~a~~~~~~-----------------------~~~l~~~------~~--~~~~~v~~Ss~~~~~~~~~~~~~e  119 (265)
                       .+|++||+||.....                       ...++.+      +.  +..+||++||...+..        
T Consensus       738 ~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--------  809 (1878)
T 2uv9_A          738 WDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--------  809 (1878)
T ss_dssp             CCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--------
T ss_pred             CCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--------
Confidence             489999999863211                       1112222      22  2358999998764311        


Q ss_pred             CCCCCccccccchhhHHHHHh----h---cCCceeEeecceee-CCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          120 TDTVDPKSRHKGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       120 ~~~~~~~~~~~~k~~~E~~~~----~---~~~~~~i~r~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                          ....|..+|..++.+.+    +   .+++++.+.||++- .+... .  ..........  ..+        .+..
T Consensus       810 ----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~-~--~~~~~~~~~~--~pl--------r~~s  872 (1878)
T 2uv9_A          810 ----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS-A--NNLVAEGVEK--LGV--------RTFS  872 (1878)
T ss_dssp             ----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS-H--HHHTHHHHHT--TTC--------CCBC
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc-c--chhhHHHHHh--cCC--------CCCC
Confidence                11234488988887642    1   13899999999887 44211 1  0111111111  110        2236


Q ss_pred             HHHHHHHHHHHhcCcc---ccCceEEe--cCCCc--cCHHHHHHH
Q 024575          192 VKDLARAFVQVLGNEK---ASRQVFNI--SGEKY--VTFDGLARA  229 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~---~~~~~~~i--~~~~~--~s~~el~~~  229 (265)
                      .+|+|++++.++....   ..|+.+.+  .++..  ..+.++...
T Consensus       873 PeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~  917 (1878)
T 2uv9_A          873 QQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTK  917 (1878)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHH
T ss_pred             HHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHH
Confidence            8999999998886542   24666665  35432  345555443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.79  E-value=4.7e-09  Score=71.90  Aligned_cols=86  Identities=24%  Similarity=0.207  Sum_probs=67.3

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +|+ |++|+.+++.|.+.| ++|++++|++.+... +.          ..++.++.+|+.+.+.+.+++.  ++|+||++
T Consensus        11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-~~----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   76 (118)
T 3ic5_A           11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-LN----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA   76 (118)
T ss_dssp             ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-HH----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-HH----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence            588 999999999999999 999999998655211 11          2578889999999999999998  99999999


Q ss_pred             CCCCccchHHHHHhCC--CCCcEEE
Q 024575           80 NGREADEVEPILDALP--NLEQFIY  102 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~--~~~~~v~  102 (265)
                      ++.  ....++++++.  +++++.+
T Consensus        77 ~~~--~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APF--FLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCG--GGHHHHHHHHHHTTCEEECC
T ss_pred             CCc--hhhHHHHHHHHHhCCCEEEe
Confidence            964  34567777765  5544443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.69  E-value=7e-08  Score=79.24  Aligned_cols=82  Identities=11%  Similarity=-0.044  Sum_probs=59.1

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCCccccCCCC-------CChhHHhhhhccceEEEecCCChHHHHHHhhc--
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   70 (265)
                      |||++.||.++++.|++ .|++|++++|+..........       .....+......+..+.+|++|++++.++++.  
T Consensus        53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  132 (405)
T 3zu3_A           53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK  132 (405)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999876552211100       00111222234678899999999888776653  


Q ss_pred             ---cCccEEEEcCCC
Q 024575           71 ---KGFDVVYDINGR   82 (265)
Q Consensus        71 ---~~~d~vi~~a~~   82 (265)
                         .++|++||+||.
T Consensus       133 ~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          133 QDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCEEEEcCcc
Confidence               269999999876

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.42  E-value=3.1e-07  Score=64.96  Aligned_cols=91  Identities=13%  Similarity=0.113  Sum_probs=64.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~   79 (265)
                      +|+ |.+|+.+++.|.+.|++|++++|++... +.+.          ..+...+.+|..+.+.+.++ +.  ++|+||++
T Consensus        12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~-~~~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   77 (144)
T 2hmt_A           12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-NAYA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA   77 (144)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-HTTT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence            476 9999999999999999999999976542 2222          13456788999988877765 55  89999999


Q ss_pred             CCCCccchHHHHHhCC--CCCcEEEEec
Q 024575           80 NGREADEVEPILDALP--NLEQFIYCSS  105 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~--~~~~~v~~Ss  105 (265)
                      ++........+...++  +.++++..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           78 IGANIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence            8864332333444444  5556665554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.31  E-value=6.3e-07  Score=89.74  Aligned_cols=143  Identities=17%  Similarity=0.153  Sum_probs=93.9

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~   75 (265)
                      |||+|.||.+++++|+++|++ |++++|+..+.... .. ....+.....++.++.+|++|.+++.++++.    ..+|+
T Consensus      1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~-~~-~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A         1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQ-AR-QVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHH-HH-HHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHH-HH-HHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999987 77778876542100 00 0011111124678889999999988777653    26899


Q ss_pred             EEEcCCCCc--------------------cchHHHHH----hCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccccc
Q 024575           76 VYDINGREA--------------------DEVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (265)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~  131 (265)
                      +||+||...                    .++.++.+    .+....+||++||....-.          ......|..+
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g----------~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG----------NAGQANYGFA 2037 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT----------CTTCHHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC----------CCCcHHHHHH
Confidence            999998621                    12333322    3444578999999765311          1111234489


Q ss_pred             hhhHHHHHh---hcCCceeEeecceee
Q 024575          132 KLNTESVLE---SKGVNWTSLRPVYIY  155 (265)
Q Consensus       132 k~~~E~~~~---~~~~~~~i~r~~~i~  155 (265)
                      |..++.+.+   ..|++...+..+.+-
T Consensus      2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2038 NSAMERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHCCCcEEEEEccCcC
Confidence            999888764   568888888777543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.27  E-value=7.5e-07  Score=70.90  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=58.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+|.+|++++..|++.|++|+++.|+.++.. .+.    ..+.. ..++.++.+|+++.+++.++++  ++|+|||++
T Consensus       125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~-~l~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a  196 (287)
T 1lu9_A          125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQ-AAA----DSVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG  196 (287)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----HHHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHH-HHH----HHHHh-cCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence            699999999999999999999999999765421 111    01111 1356788999999999999998  899999999


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.12  E-value=2e-06  Score=60.77  Aligned_cols=67  Identities=25%  Similarity=0.261  Sum_probs=53.1

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+ |.+|+++++.|.+.|++|++++++++... .+.          ..++.++.+|.++++.+.++-- .++|.||.+.+
T Consensus        13 G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~-~~~----------~~~~~~~~gd~~~~~~l~~~~~-~~~d~vi~~~~   79 (141)
T 3llv_A           13 GS-EAAGVGLVRELTAAGKKVLAVDKSKEKIE-LLE----------DEGFDAVIADPTDESFYRSLDL-EGVSAVLITGS   79 (141)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHH----------HTTCEEEECCTTCHHHHHHSCC-TTCSEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHH----------HCCCcEEECCCCCHHHHHhCCc-ccCCEEEEecC
Confidence            44 99999999999999999999999865521 111          2468889999999998887621 28999999887

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.11  E-value=3.2e-06  Score=71.42  Aligned_cols=71  Identities=17%  Similarity=0.196  Sum_probs=55.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +| +|++|+++++.|++.|++|++.+|+..+.. .+.+.        ..++..+.+|+.+.+++.+++.  ++|+|||++
T Consensus         9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~-~la~~--------~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a   76 (450)
T 1ff9_A            9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAK-KLSAG--------VQHSTPISLDVNDDAALDAEVA--KHDLVISLI   76 (450)
T ss_dssp             EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHH-HTTTT--------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHH-HHHHh--------cCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence            46 799999999999999999999999865532 22210        1346788999999999999998  999999999


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      +..
T Consensus        77 ~~~   79 (450)
T 1ff9_A           77 PYT   79 (450)
T ss_dssp             C--
T ss_pred             ccc
Confidence            863

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.98  E-value=7.9e-06  Score=66.09  Aligned_cols=94  Identities=16%  Similarity=0.262  Sum_probs=61.6

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |||+|++|+.++..|++.|  ++|+++++++.. ...      ..+........ +.+ +.+.+++.++++  ++|+|||
T Consensus        14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~------~dL~~~~~~~~-v~~-~~~t~d~~~al~--gaDvVi~   82 (326)
T 1smk_A           14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVT------ADISHMDTGAV-VRG-FLGQQQLEAALT--GMDLIIV   82 (326)
T ss_dssp             ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHH------HHHHTSCSSCE-EEE-EESHHHHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHH------HHhhcccccce-EEE-EeCCCCHHHHcC--CCCEEEE
Confidence            6899999999999999988  899998876541 000      00110001111 122 234556778888  9999999


Q ss_pred             cCCCCc--------------cchHHHHHhCC--CCCcEEEEec
Q 024575           79 INGREA--------------DEVEPILDALP--NLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss  105 (265)
                      +++...              ..++++++++.  +.+.+|+++|
T Consensus        83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            998642              23566777765  6677888776

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.93  E-value=2.5e-05  Score=54.69  Aligned_cols=90  Identities=17%  Similarity=0.203  Sum_probs=60.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~   79 (265)
                      +|+ |++|+.+++.|.+.|++|++++|++... +.+        .. ..++.++.+|..+.+.+.+. +.  ++|+||++
T Consensus        10 iG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~-~~~--------~~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   76 (140)
T 1lss_A           10 AGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-KKA--------SA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAV   76 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHH--------HH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-HHH--------HH-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence            354 9999999999999999999999875541 111        10 12677788999888877654 55  89999999


Q ss_pred             CCCCccchHHHHHhCC--CCCcEEEEe
Q 024575           80 NGREADEVEPILDALP--NLEQFIYCS  104 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~--~~~~~v~~S  104 (265)
                      .+... ....+...++  +..++|..+
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           77 TGKEE-VNLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             CSCHH-HHHHHHHHHHHTTCCCEEEEC
T ss_pred             eCCch-HHHHHHHHHHHcCCCEEEEEe
Confidence            76531 1122333443  445666533

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.87  E-value=3.7e-06  Score=70.12  Aligned_cols=95  Identities=13%  Similarity=0.096  Sum_probs=66.4

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +|| |++|+.+++.|++.|   .+|++.+|+.++... +.    ..+... ..++..+.+|++|.+++.+++++.++|+|
T Consensus         7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~-la----~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQE-IA----QSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHH-HH----HHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHH-HH----HHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            477 999999999999998   389999998765211 11    000000 02588999999999999999994459999


Q ss_pred             EEcCCCCccchHHHHHhCC-CCCcEEEE
Q 024575           77 YDINGREADEVEPILDALP-NLEQFIYC  103 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~-~~~~~v~~  103 (265)
                      ||+++...  ...++++|- ..++++-+
T Consensus        81 in~ag~~~--~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           81 LNIALPYQ--DLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EECSCGGG--HHHHHHHHHHHTCCEEES
T ss_pred             EECCCccc--ChHHHHHHHHhCCCEEEe
Confidence            99998643  345666654 33455543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.81  E-value=4.8e-06  Score=67.47  Aligned_cols=94  Identities=10%  Similarity=0.007  Sum_probs=60.5

Q ss_pred             CCccccchHHHHHHHHHcCC-------eEEEEEcC----CCccccCCCCCChhHHhhhhcc-ceEEEecCCChHHHHHHh
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSL   68 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~   68 (265)
                      |||+|++|++++..|+..|.       +|++++++    ..+...        ....+... ..+ ..|+...+++.+++
T Consensus        11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g--------~~~dl~~~~~~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A           11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQG--------VMMEIDDCAFPL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHH--------HHHHHHTTTCTT-EEEEEEESSHHHHT
T ss_pred             ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchh--------hHHHHhhhcccc-cCcEEEecCcHHHh
Confidence            79999999999999998875       78888776    221100        00000111 111 24565556677888


Q ss_pred             hccCccEEEEcCCCCcc--------------chHHHHHhCC--C-CC-cEEEEec
Q 024575           69 SAKGFDVVYDINGREAD--------------EVEPILDALP--N-LE-QFIYCSS  105 (265)
Q Consensus        69 ~~~~~d~vi~~a~~~~~--------------~~~~l~~~~~--~-~~-~~v~~Ss  105 (265)
                      +  ++|+|||+++....              .++++++++.  . .+ +||++|.
T Consensus        82 ~--~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           82 K--DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             T--TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             C--CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            8  99999999996432              2455666655  3 34 7888875

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.75  E-value=1.5e-05  Score=67.50  Aligned_cols=70  Identities=23%  Similarity=0.190  Sum_probs=55.7

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +|+ |++|+++++.|++. +++|++.+|+.++.. .+        .. ..++..+.+|+.+.+++.+++.  ++|+|||+
T Consensus        29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~-~l--------a~-~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~   95 (467)
T 2axq_A           29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ-AL--------AK-PSGSKAISLDVTDDSALDKVLA--DNDVVISL   95 (467)
T ss_dssp             ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH-HH--------HG-GGTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred             ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH-HH--------HH-hcCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence            476 99999999999998 789999999865521 11        11 1356778899999999999998  99999999


Q ss_pred             CCCC
Q 024575           80 NGRE   83 (265)
Q Consensus        80 a~~~   83 (265)
                      ++..
T Consensus        96 tp~~   99 (467)
T 2axq_A           96 IPYT   99 (467)
T ss_dssp             SCGG
T ss_pred             Cchh
Confidence            8863

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.74  E-value=3.2e-05  Score=63.65  Aligned_cols=86  Identities=15%  Similarity=0.088  Sum_probs=64.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|| |++|+.+++.|.+ .++|.+.+|+..+..            .....+..+.+|..|.+++.++++  +.|+||+++
T Consensus        22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~------------~~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~   85 (365)
T 3abi_A           22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLE------------KVKEFATPLKVDASNFDKLVEVMK--EFELVIGAL   85 (365)
T ss_dssp             ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHH------------HHTTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHH------------HHhccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence            377 9999999998865 589999888765521            113567778999999999999999  999999998


Q ss_pred             CCCccchHHHHHhCC-CCCcEEEEe
Q 024575           81 GREADEVEPILDALP-NLEQFIYCS  104 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~-~~~~~v~~S  104 (265)
                      +..  ....++++|- ..++++=+|
T Consensus        86 p~~--~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGF--LGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGG--GHHHHHHHHHHHTCEEEECC
T ss_pred             CCc--ccchHHHHHHhcCcceEeee
Confidence            764  2345666654 445665544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.74  E-value=8.8e-05  Score=53.08  Aligned_cols=67  Identities=16%  Similarity=0.370  Sum_probs=52.5

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~~   82 (265)
                      .|.+|+.+++.|.+.|++|++++|++... +.+..         ..+...+.+|..+.+.+.++ +.  ++|+||.+.+.
T Consensus        27 ~G~iG~~la~~L~~~g~~V~vid~~~~~~-~~~~~---------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~~   94 (155)
T 2g1u_A           27 CGRLGSLIANLASSSGHSVVVVDKNEYAF-HRLNS---------EFSGFTVVGDAAEFETLKECGME--KADMVFAFTND   94 (155)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCGGGG-GGSCT---------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSSC
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEECCHHHH-HHHHh---------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeCC
Confidence            59999999999999999999999987663 22220         14567788898888777665 55  89999999875

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.70  E-value=9.9e-05  Score=56.09  Aligned_cols=64  Identities=14%  Similarity=0.191  Sum_probs=44.9

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHH----HHhhccCccEEEEc
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK----SSLSAKGFDVVYDI   79 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~~~~d~vi~~   79 (265)
                      ||.+|.++++.|+++|++|++++|...... ..           ..++..+  |+...+++.    +.+.  ++|++||+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~-----------~~~~~~~--~v~s~~em~~~v~~~~~--~~Dili~a   91 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALKP-EP-----------HPNLSIR--EITNTKDLLIEMQERVQ--DYQVLIHS   91 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CC-----------CTTEEEE--ECCSHHHHHHHHHHHGG--GCSEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCccccc-cC-----------CCCeEEE--EHhHHHHHHHHHHHhcC--CCCEEEEc
Confidence            899999999999999999999999764311 00           1344444  444544333    3344  79999999


Q ss_pred             CCCC
Q 024575           80 NGRE   83 (265)
Q Consensus        80 a~~~   83 (265)
                      |+..
T Consensus        92 AAvs   95 (232)
T 2gk4_A           92 MAVS   95 (232)
T ss_dssp             SBCC
T ss_pred             Cccc
Confidence            9964

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.70  E-value=5.1e-05  Score=54.20  Aligned_cols=72  Identities=15%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a   80 (265)
                      | .|.+|+.+++.|.+.|++|+++++++....+.+.       .....++.++.+|.++++.+.++ +.  +.|.||-+.
T Consensus        10 G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (153)
T 1id1_A           10 G-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALS   79 (153)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECS
T ss_pred             C-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEec
Confidence            5 5999999999999999999999997532111110       00124789999999999998876 76  899999987


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      +..
T Consensus        80 ~~d   82 (153)
T 1id1_A           80 DND   82 (153)
T ss_dssp             SCH
T ss_pred             CCh
Confidence            653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.60  E-value=3e-05  Score=57.92  Aligned_cols=93  Identities=17%  Similarity=0.169  Sum_probs=61.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHH---HHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|++++|+++... ...          ..+... ..|..+.+...   +.....++|++|
T Consensus        45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~-~~~----------~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLS----------RLGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH----------TTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            689999999999999999999999998765421 111          012222 24666554333   333323699999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      ++++.  ......++.++...++|.+++..
T Consensus       113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAG--EAIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred             ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence            99873  44556667777445888877643

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.56  E-value=6.6e-06  Score=65.87  Aligned_cols=91  Identities=15%  Similarity=0.129  Sum_probs=55.8

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEc--CCCccccCCCCCChhHHhh---hhccceEEEecCCChHHHHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (265)
                      |||+|++|++++..|+..+.  +++++++  ++.+.. ...    ..+..   ...++.+.. +  +    .+.++  ++
T Consensus         6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~-~~~----~dl~~~~~~~~~~~v~~-~--~----~~a~~--~a   71 (303)
T 1o6z_A            6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTV-GQA----ADTNHGIAYDSNTRVRQ-G--G----YEDTA--GS   71 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHH-HHH----HHHHHHHTTTCCCEEEE-C--C----GGGGT--TC
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHH-HHH----HHHHHHHhhCCCcEEEe-C--C----HHHhC--CC
Confidence            68999999999999998875  6777776  332210 000    01111   112333332 1  2    34566  99


Q ss_pred             cEEEEcCCCCc--------------cchHHHHHhCC--CCCcEEEEec
Q 024575           74 DVVYDINGREA--------------DEVEPILDALP--NLEQFIYCSS  105 (265)
Q Consensus        74 d~vi~~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss  105 (265)
                      |+|||+++...              ..+++++++++  +.+.+|+++|
T Consensus        72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99999998642              23566777765  5677887776

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.55  E-value=0.00018  Score=54.52  Aligned_cols=64  Identities=13%  Similarity=0.134  Sum_probs=45.8

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc--cCccEEEEcCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~d~vi~~a~   81 (265)
                      ||.+|.++++.|+++|++|+++++...-  . .+           .++.  .+|+.+.+++.+.+.+  .++|++||+||
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l--~-~~-----------~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVSL--P-TP-----------PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC--C-CC-----------TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCccc--c-cC-----------CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence            7999999999999999999999886521  1 11           2333  5677776655443321  26999999999


Q ss_pred             CC
Q 024575           82 RE   83 (265)
Q Consensus        82 ~~   83 (265)
                      ..
T Consensus        97 v~   98 (226)
T 1u7z_A           97 VA   98 (226)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.50  E-value=1.4e-05  Score=64.20  Aligned_cols=97  Identities=15%  Similarity=0.110  Sum_probs=57.4

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEc--CCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~   75 (265)
                      |||+|++|++++..|+..+.  +++++++  ++.......     ..+..... ..-...++.+. +++.++++  ++|+
T Consensus         6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~-----~dl~~~~~-~~~~~~~i~~~~d~l~~al~--gaD~   77 (313)
T 1hye_A            6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLR-----EDIYDALA-GTRSDANIYVESDENLRIID--ESDV   77 (313)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHH-----HHHHHHHT-TSCCCCEEEEEETTCGGGGT--TCSE
T ss_pred             ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHH-----HHHHHhHH-hcCCCeEEEeCCcchHHHhC--CCCE
Confidence            69999999999999998874  6777776  322110000     00000000 00011122221 23456677  9999


Q ss_pred             EEEcCCCCc--------------cchHHHHHhCC--CCCcEEEEecc
Q 024575           76 VYDINGREA--------------DEVEPILDALP--NLEQFIYCSSA  106 (265)
Q Consensus        76 vi~~a~~~~--------------~~~~~l~~~~~--~~~~~v~~Ss~  106 (265)
                      |||+|+...              ..+++++++++  + +.+|+++|-
T Consensus        78 Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           78 VIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            999998632              23667777776  7 888888873

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.44  E-value=8.8e-05  Score=52.12  Aligned_cols=68  Identities=10%  Similarity=0.164  Sum_probs=54.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+.+++.|.+.|++|++++++++... .+.          ..++..+.+|.++++.+.++ +.  +.|.||-+.+
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~-~~~----------~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~   80 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVD-ELR----------ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP   80 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHH----------HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHH----------HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence            4599999999999999999999999876521 111          25788999999999988765 44  8999998876


Q ss_pred             CC
Q 024575           82 RE   83 (265)
Q Consensus        82 ~~   83 (265)
                      ..
T Consensus        81 ~~   82 (140)
T 3fwz_A           81 NG   82 (140)
T ss_dssp             CH
T ss_pred             Ch
Confidence            54

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.38  E-value=0.00054  Score=55.99  Aligned_cols=83  Identities=12%  Similarity=0.031  Sum_probs=60.5

Q ss_pred             CCccccchHHHHHHHH-HcCCeEEEEEcCCCccccCCCCC-------ChhHHhhhhccceEEEecCCChHHHHHHhhc--
Q 024575            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGE-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   70 (265)
                      |||++.+|.+.+..|+ +.|..|+++.+..+.........       ......+.......+.||+++++.+.++++.  
T Consensus        56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~  135 (401)
T 4ggo_A           56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK  135 (401)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence            7999999999999988 67999999998776533322110       0122233345788999999999888777654  


Q ss_pred             ---cCccEEEEcCCCC
Q 024575           71 ---KGFDVVYDINGRE   83 (265)
Q Consensus        71 ---~~~d~vi~~a~~~   83 (265)
                         .++|+++|.++..
T Consensus       136 ~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          136 KKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HTTCCEEEEEECCCCS
T ss_pred             HhcCCCCEEEEecccc
Confidence               2799999998863

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.34  E-value=7.7e-05  Score=54.94  Aligned_cols=67  Identities=19%  Similarity=0.065  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH--hhccCccEEEEc
Q 024575            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI   79 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~~~d~vi~~   79 (265)
                      |.|.+|+.+++.|.+. |++|++++++++... .+.          ..++..+.+|.++.+.+.++  +.  ++|.||.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~-~~~----------~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~  112 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQ-QHR----------SEGRNVISGDATDPDFWERILDTG--HVKLVLLA  112 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHH-HHH----------HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHH-HHH----------HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence            3699999999999999 999999999876521 111          24678889999998888776  66  89999988


Q ss_pred             CCC
Q 024575           80 NGR   82 (265)
Q Consensus        80 a~~   82 (265)
                      .+.
T Consensus       113 ~~~  115 (183)
T 3c85_A          113 MPH  115 (183)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.32  E-value=0.00011  Score=55.82  Aligned_cols=69  Identities=17%  Similarity=0.317  Sum_probs=54.7

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a   80 (265)
                      | .|.+|+++++.|.+.|++|++++++++... .+.        . ..++.++.+|.++++.+.++ +.  ++|+||-+.
T Consensus         7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~-~l~--------~-~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            7 G-GETTAYYLARSMLSRKYGVVIINKDRELCE-EFA--------K-KLKATIIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHH--------H-HSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHH--------H-HcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            5 499999999999999999999999876521 110        0 24688999999999998876 55  899999887


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      +..
T Consensus        74 ~~d   76 (218)
T 3l4b_C           74 PRD   76 (218)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.28  E-value=0.00011  Score=74.57  Aligned_cols=82  Identities=11%  Similarity=0.068  Sum_probs=57.5

Q ss_pred             CCcccc-chHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---------
Q 024575            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (265)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---------   70 (265)
                      |||++. ||.++++.|++.|.+|++++|+.........+.....+......+..+.+|++|.+++.++++.         
T Consensus      2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D         2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred             eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence            799999 9999999999999999999998765110000000001111123577899999999888776532         


Q ss_pred             cCccEEEEcCCC
Q 024575           71 KGFDVVYDINGR   82 (265)
Q Consensus        71 ~~~d~vi~~a~~   82 (265)
                      .++|++||+||.
T Consensus      2222 G~IDILVNNAGi 2233 (3089)
T 3zen_D         2222 GPQSIHLKDAQT 2233 (3089)
T ss_dssp             SSSEEEECCCCC
T ss_pred             CCCCEEEECCCc
Confidence            258999999986

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.28  E-value=0.00049  Score=56.63  Aligned_cols=92  Identities=13%  Similarity=0.109  Sum_probs=63.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|+ |.+|+.+++.|...|++|++++|++.+.. ..        .+ ..+.. +.+|..+.+.+.+.+.  ++|+||+++
T Consensus       172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~-~~--------~~-~~g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~  237 (369)
T 2eez_A          172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ-YL--------DD-VFGGR-VITLTATEANIKKSVQ--HADLLIGAV  237 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------HH-HTTTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH-HH--------HH-hcCce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence            477 99999999999999999999999865421 11        00 01222 5567778888888888  899999999


Q ss_pred             CCCcc-----chHHHHHhCCCCCcEEEEecc
Q 024575           81 GREAD-----EVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        81 ~~~~~-----~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +....     -....++.++....+|.+|+.
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence            86431     145667777755678888864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.19  E-value=0.00067  Score=54.94  Aligned_cols=91  Identities=19%  Similarity=0.154  Sum_probs=61.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|++|++++|++.+. +..        .+  .+.. ...|.++.+   .+.+.....++|++|
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~-~~~--------~~--~g~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKA-ETA--------RK--LGCH-HTINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-HHH--------HH--HTCS-EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHH--------HH--cCCC-EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            68999999999999999999999999986442 111        11  1222 224665543   333333334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|.  ......++.++...+++.++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~  245 (333)
T 1wly_A          220 DSIGK--DTLQKSLDCLRPRGMCAAYGH  245 (333)
T ss_dssp             ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred             ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence            99986  556677777774457777764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.00045  Score=55.82  Aligned_cols=91  Identities=16%  Similarity=0.143  Sum_probs=61.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|++|++++|++.+.. ..        .+  .+.. ...|..+.+.   +.+.....++|++|
T Consensus       147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~-~~--------~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SA--------LK--AGAW-QVINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HH--------HH--HTCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HH--cCCC-EEEECCCccHHHHHHHHhCCCCceEEE
Confidence            689999999999999999999999998755421 11        11  1222 2246655443   33333334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|  .......++.++...+++.+++
T Consensus       215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~  240 (327)
T 1qor_A          215 DSVG--RDTWERSLDCLQRRGLMVSFGN  240 (327)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence            9998  4556677777774457887765

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.98  E-value=0.0023  Score=45.70  Aligned_cols=78  Identities=15%  Similarity=0.107  Sum_probs=52.4

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh--HHHHHHhhc----cCccEEE
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY   77 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~----~~~d~vi   77 (265)
                      +|.++.+.++.|.+.|++|++..|.+.... ..+. ..............+.+|++++  +++.++++.    .+-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~-~~~~-~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKD-AHPD-EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTT-SCTT-HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCccccc-cccc-HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            578999999999999999999888655421 1111 1112222223466778899998  777665542    2349999


Q ss_pred             EcCCCC
Q 024575           78 DINGRE   83 (265)
Q Consensus        78 ~~a~~~   83 (265)
                      ||+|..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.88  E-value=0.0029  Score=51.37  Aligned_cols=92  Identities=17%  Similarity=0.099  Sum_probs=62.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|++|++++|++.+.. ..        .+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~-~~--------~~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR-RA--------KA--LGADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------HH--HTCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------Hh--cCCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            689999999999999999999999998765521 11        11  12222 24665543   333333323799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +++|  .......++.++...+++.+++.
T Consensus       241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~~  267 (343)
T 2eih_A          241 DHTG--ALYFEGVIKATANGGRIAIAGAS  267 (343)
T ss_dssp             ESSC--SSSHHHHHHHEEEEEEEEESSCC
T ss_pred             ECCC--HHHHHHHHHhhccCCEEEEEecC
Confidence            9999  45677778888844578877753

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.82  E-value=0.001  Score=54.13  Aligned_cols=91  Identities=12%  Similarity=0.026  Sum_probs=57.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHH----HHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK----SSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~~~~d~v   76 (265)
                      +||+|.+|..+++.+...|.+|++++|++.+. +..        .  ..+.. ...|+.+.+++.    ++... ++|+|
T Consensus       176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~--------~--~~g~~-~~~d~~~~~~~~~~~~~~~~~-~~D~v  242 (347)
T 2hcy_A          176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELF--------R--SIGGE-VFIDFTKEKDIVGAVLKATDG-GAHGV  242 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHH--------H--HTTCC-EEEETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHH--------H--HcCCc-eEEecCccHhHHHHHHHHhCC-CCCEE
Confidence            58999999999999999999999999886652 111        1  11222 234766433333    33333 79999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |++++.. ......++.++...+++.+++
T Consensus       243 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          243 INVSVSE-AAIEASTRYVRANGTTVLVGM  270 (347)
T ss_dssp             EECSSCH-HHHHHHTTSEEEEEEEEECCC
T ss_pred             EECCCcH-HHHHHHHHHHhcCCEEEEEeC
Confidence            9998741 223334444444457777764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.76  E-value=0.0036  Score=50.80  Aligned_cols=92  Identities=15%  Similarity=0.177  Sum_probs=57.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (265)
                      +||+|.+|...++.+...|.+|+++++++.+. +..        .+ .+...++..+ .+ .+.+.+.....++|+||++
T Consensus       166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~--------~~-~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFV--------KS-VGADIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHH--------HH-HTCSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH--------Hh-cCCcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            58999999999999999999999999977652 111        11 1112222222 22 2334444443479999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEec
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +|..  .....++.++...+++.++.
T Consensus       235 ~g~~--~~~~~~~~l~~~G~iv~~G~  258 (342)
T 4eye_A          235 IGGP--AFDDAVRTLASEGRLLVVGF  258 (342)
T ss_dssp             CC----CHHHHHHTEEEEEEEEEC--
T ss_pred             Cchh--HHHHHHHhhcCCCEEEEEEc
Confidence            9863  56667777775567777764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.73  E-value=0.002  Score=52.58  Aligned_cols=91  Identities=13%  Similarity=0.089  Sum_probs=60.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ..        .+  .+.. ...|..+.+.   +.+.....++|++|
T Consensus       169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MA--------EK--LGAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------HH--HTCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HH--cCCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            689999999999999999999999998765421 11        11  1222 2345555433   33333334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|..  .....++.++...+++.++.
T Consensus       237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          237 DCIGGS--YWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCch--HHHHHHHhccCCCEEEEEec
Confidence            999863  45566777774457777664

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.72  E-value=0.002  Score=52.08  Aligned_cols=91  Identities=20%  Similarity=0.220  Sum_probs=61.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++++++++.. ..        .  .-+.. ...|..+.+   .+.+.....++|+||
T Consensus       155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~--~~ga~-~~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IA--------K--EYGAE-YLINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------H--HTTCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------H--HcCCc-EEEeCCCchHHHHHHHHhCCCCceEEE
Confidence            588999999999999999999999999765521 11        1  11222 123444433   344444334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|.  ......++.++...+++.++.
T Consensus       223 d~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (334)
T 3qwb_A          223 DSVGK--DTFEISLAALKRKGVFVSFGN  248 (334)
T ss_dssp             ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence            99985  556677777875567777764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.72  E-value=0.0036  Score=51.25  Aligned_cols=92  Identities=22%  Similarity=0.156  Sum_probs=59.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|+++++++++.. ..        .  .-+... ..|..+.+   .+.+.. ..++|+||
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~--------~--~~Ga~~-~~~~~~~~~~~~~~~~~-~~g~D~vi  236 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA-FL--------K--SLGCDR-PINYKTEPVGTVLKQEY-PEGVDVVY  236 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------H--HTTCSE-EEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-HH--------H--HcCCcE-EEecCChhHHHHHHHhc-CCCCCEEE
Confidence            589999999999999999999999998755421 11        1  122322 23443322   222222 23799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +++|.  ......++.++...+++.+++..
T Consensus       237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~  264 (362)
T 2c0c_A          237 ESVGG--AMFDLAVDALATKGRLIVIGFIS  264 (362)
T ss_dssp             ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence            99985  44556677777445888877643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.71  E-value=0.00023  Score=53.67  Aligned_cols=79  Identities=14%  Similarity=0.061  Sum_probs=48.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|+++++.|.+.|++|++++|++++.. .+.        .. .+..+...|+. .+++.++++  ++|+||++.
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~-~~~--------~~-~~~~~~~~~~~-~~~~~~~~~--~~D~Vi~~~   72 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAE-AKA--------AE-YRRIAGDASIT-GMKNEDAAE--ACDIAVLTI   72 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH-HHH--------HH-HHHHHSSCCEE-EEEHHHHHH--HCSEEEECS
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------HH-hccccccCCCC-hhhHHHHHh--cCCEEEEeC
Confidence            478999999999999999999999999765421 110        00 00000001222 234556676  899999997


Q ss_pred             CCCccchHHHHHhC
Q 024575           81 GREADEVEPILDAL   94 (265)
Q Consensus        81 ~~~~~~~~~l~~~~   94 (265)
                      ..  .....+++.+
T Consensus        73 ~~--~~~~~~~~~l   84 (212)
T 1jay_A           73 PW--EHAIDTARDL   84 (212)
T ss_dssp             CH--HHHHHHHHHT
T ss_pred             Ch--hhHHHHHHHH
Confidence            63  3344555443

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.68  E-value=0.0015  Score=52.35  Aligned_cols=69  Identities=28%  Similarity=0.303  Sum_probs=45.5

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~   75 (265)
                      +||+|++|+.++..|+..|  .+|+++++++.. ..         ...+.....  ..++..   .++++++++  ++|+
T Consensus         6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~-~~---------a~dL~~~~~--~~~l~~~~~t~d~~~a~~--~aDv   71 (314)
T 1mld_A            6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP-GV---------AADLSHIET--RATVKGYLGPEQLPDCLK--GCDV   71 (314)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH-HH---------HHHHTTSSS--SCEEEEEESGGGHHHHHT--TCSE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH-HH---------HHHHhccCc--CceEEEecCCCCHHHHhC--CCCE
Confidence            5889999999999999888  799999998621 10         001111110  112222   245667788  9999


Q ss_pred             EEEcCCCC
Q 024575           76 VYDINGRE   83 (265)
Q Consensus        76 vi~~a~~~   83 (265)
                      ||++++..
T Consensus        72 Vvi~ag~~   79 (314)
T 1mld_A           72 VVIPAGVP   79 (314)
T ss_dssp             EEECCSCC
T ss_pred             EEECCCcC
Confidence            99999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.65  E-value=0.002  Score=51.92  Aligned_cols=91  Identities=16%  Similarity=0.076  Sum_probs=59.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++++++.+.. ..        .+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~--~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HA--------KA--LGAWE-TIDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HH--------HH--HTCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------HH--cCCCE-EEeCCCccHHHHHHHHhCCCCceEEE
Confidence            589999999999999989999999998765521 11        11  12221 23444433   344444434799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|.  ......++.++...+++.++.
T Consensus       215 d~~g~--~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence            99985  445566666665567777764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.60  E-value=0.0021  Score=52.53  Aligned_cols=92  Identities=16%  Similarity=0.184  Sum_probs=59.6

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~v   76 (265)
                      +||+|.+|..+++.+...|. +|+++++++.+.. .+        .. .-+.. ...|..+.+   .+.+.... ++|++
T Consensus       167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~-~~--------~~-~~g~~-~~~d~~~~~~~~~~~~~~~~-~~d~v  234 (357)
T 2zb4_A          167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI-LL--------TS-ELGFD-AAINYKKDNVAEQLRESCPA-GVDVY  234 (357)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HH--------HH-TSCCS-EEEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH-HH--------HH-HcCCc-eEEecCchHHHHHHHHhcCC-CCCEE
Confidence            69999999999999999999 9999998764421 11        00 01222 234665543   23333332 79999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      |+++|.  ......++.++...+++.++..
T Consensus       235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~  262 (357)
T 2zb4_A          235 FDNVGG--NISDTVISQMNENSHIILCGQI  262 (357)
T ss_dssp             EESCCH--HHHHHHHHTEEEEEEEEECCCG
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEECCc
Confidence            999984  4445566666644578877653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.58  E-value=0.008  Score=48.91  Aligned_cols=92  Identities=18%  Similarity=0.231  Sum_probs=61.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++++++.+.. .+        .+  -+... ..|..+.+   .+.+.....++|+||
T Consensus       171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~--------~~--~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LL--------KD--IGAAH-VLNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HH--------HH--HTCSE-EEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------HH--cCCCE-EEECCcHHHHHHHHHHhcCCCCcEEE
Confidence            589999999999999888999999998766521 11        11  22221 23444432   333433334899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +++|..  .....++.++...+++.++..
T Consensus       239 d~~g~~--~~~~~~~~l~~~G~iv~~G~~  265 (349)
T 3pi7_A          239 DAVTGP--LASAIFNAMPKRARWIIYGRL  265 (349)
T ss_dssp             ESSCHH--HHHHHHHHSCTTCEEEECCCS
T ss_pred             ECCCCh--hHHHHHhhhcCCCEEEEEecc
Confidence            999853  346677788866788887643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.53  E-value=0.00062  Score=55.40  Aligned_cols=91  Identities=14%  Similarity=0.177  Sum_probs=57.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH----HHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~~~~~~~~d~v   76 (265)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ...        + .-+.. ...|..+.+    .+.+.. ..++|+|
T Consensus       162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~-~~~--------~-~~g~~-~~~d~~~~~~~~~~~~~~~-~~~~d~v  229 (345)
T 2j3h_A          162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD-LLK--------T-KFGFD-DAFNYKEESDLTAALKRCF-PNGIDIY  229 (345)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H-TSCCS-EEEETTSCSCSHHHHHHHC-TTCEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H-HcCCc-eEEecCCHHHHHHHHHHHh-CCCCcEE
Confidence            689999999999999999999999998765421 110        0 01222 223655432    233322 2379999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |+++|.  ......++.++...+++.++.
T Consensus       230 i~~~g~--~~~~~~~~~l~~~G~~v~~G~  256 (345)
T 2j3h_A          230 FENVGG--KMLDAVLVNMNMHGRIAVCGM  256 (345)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCC
T ss_pred             EECCCH--HHHHHHHHHHhcCCEEEEEcc
Confidence            999985  344455555664457777654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.53  E-value=0.0015  Score=52.02  Aligned_cols=88  Identities=15%  Similarity=0.134  Sum_probs=57.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|..+++.+...|.+|+++++++.+.. ..        .  ..+... ..|..+.+++.+.+.  ++|+||+ +
T Consensus       132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~--~~ga~~-~~~~~~~~~~~~~~~--~~d~vid-~  196 (302)
T 1iz0_A          132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LP--------L--ALGAEE-AATYAEVPERAKAWG--GLDLVLE-V  196 (302)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HH--------H--HTTCSE-EEEGGGHHHHHHHTT--SEEEEEE-C
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------H--hcCCCE-EEECCcchhHHHHhc--CceEEEE-C
Confidence            589999999999999999999999999766521 11        1  123322 235544133444444  8999999 8


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEec
Q 024575           81 GREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |.  ......++.++...+++.++.
T Consensus       197 g~--~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          197 RG--KEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             SC--TTHHHHHTTEEEEEEEEEC--
T ss_pred             CH--HHHHHHHHhhccCCEEEEEeC
Confidence            76  456666777774457777664

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.51  E-value=0.0018  Score=49.60  Aligned_cols=64  Identities=13%  Similarity=-0.057  Sum_probs=51.5

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~~   82 (265)
                      .|.+|+.+++.|.+.|+ |+++++++....         .+   ..++.++.+|.++++.+.++ +.  ++|.||.+.+.
T Consensus        17 ~G~~G~~la~~L~~~g~-v~vid~~~~~~~---------~~---~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~   81 (234)
T 2aef_A           17 WSESTLECLRELRGSEV-FVLAEDENVRKK---------VL---RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLES   81 (234)
T ss_dssp             CCHHHHHHHHHSTTSEE-EEEESCGGGHHH---------HH---HTTCEEEESCTTCHHHHHHTTCT--TCSEEEECCSC
T ss_pred             CChHHHHHHHHHHhCCe-EEEEECCHHHHH---------HH---hcCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcCCC
Confidence            49999999999999999 999988765421         01   14688999999999998877 66  89999988764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.43  E-value=0.0037  Score=50.54  Aligned_cols=92  Identities=15%  Similarity=0.263  Sum_probs=58.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh---ccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|++++|++++.. ..        .  ..+.. ..+|..+.+++.+.+.   ..++|++|
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~-~~--------~--~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA-YL--------K--QIGFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------H--HTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------H--hcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            589999999999999999999999998755421 11        1  11222 2347665233332222   13799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +++|.  ......++.++...+++.++..
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (333)
T 1v3u_A          220 DNVGG--EFLNTVLSQMKDFGKIAICGAI  246 (333)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCC
T ss_pred             ECCCh--HHHHHHHHHHhcCCEEEEEecc
Confidence            99985  2344455555544578777653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.40  E-value=0.0045  Score=50.09  Aligned_cols=93  Identities=18%  Similarity=0.274  Sum_probs=59.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|++++|++.+......          .-+.. ...|..+.+.   +.+.. ..++|+||
T Consensus       156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----------~~g~~-~~~~~~~~~~~~~~~~~~-~~~~d~vi  223 (336)
T 4b7c_A          156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE----------ELGFD-GAIDYKNEDLAAGLKREC-PKGIDVFF  223 (336)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----------TTCCS-EEEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCC-EEEECCCHHHHHHHHHhc-CCCceEEE
Confidence            6999999999999999999999999988665211101          12222 2235554432   33332 23799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +++|.  ......++.++...+++.++...
T Consensus       224 ~~~g~--~~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          224 DNVGG--EILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred             ECCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence            99984  34445555566446788777544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.36  E-value=0.0078  Score=49.06  Aligned_cols=90  Identities=17%  Similarity=0.138  Sum_probs=59.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|+++++++.+.. ..        .+  -+... ..|..+.   +.+.+.. ..++|+||
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~--lGa~~-~~~~~~~~~~~~~~~~~-~~g~Dvvi  240 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-AC--------ER--LGAKR-GINYRSEDFAAVIKAET-GQGVDIIL  240 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------HH--HTCSE-EEETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------Hh--cCCCE-EEeCCchHHHHHHHHHh-CCCceEEE
Confidence            589999999999999999999999998866521 11        11  12221 2344443   2333333 35899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|.  ......++.++...+++.++.
T Consensus       241 d~~g~--~~~~~~~~~l~~~G~iv~~g~  266 (353)
T 4dup_A          241 DMIGA--AYFERNIASLAKDGCLSIIAF  266 (353)
T ss_dssp             ESCCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCH--HHHHHHHHHhccCCEEEEEEe
Confidence            99985  345566677774457777664

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.29  E-value=0.00026  Score=57.19  Aligned_cols=74  Identities=14%  Similarity=0.073  Sum_probs=43.6

Q ss_pred             CCccccchHHHHHHHHHcCC--e-----EEEEEcCCCc-cccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~-----V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (265)
                      |||+|++|++++..|+..+.  +     ++++++++.. .....    -..+.  +....+. .++...+...+.++  +
T Consensus         9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~----a~DL~--~~~~~~~-~~~~~~~~~~~~~~--d   79 (333)
T 5mdh_A            9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGV----LMELQ--DCALPLL-KDVIATDKEEIAFK--D   79 (333)
T ss_dssp             SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH----HHHHH--HTCCTTE-EEEEEESCHHHHTT--T
T ss_pred             ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhh----HhhhH--hhhhccc-CCEEEcCCcHHHhC--C
Confidence            69999999999999998764  4     8888886421 00000    00011  1011111 12222334456677  9


Q ss_pred             ccEEEEcCCCC
Q 024575           73 FDVVYDINGRE   83 (265)
Q Consensus        73 ~d~vi~~a~~~   83 (265)
                      +|+||++||..
T Consensus        80 aDvVvitAg~p   90 (333)
T 5mdh_A           80 LDVAILVGSMP   90 (333)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEEeCCCC
Confidence            99999999863

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.27  E-value=0.0078  Score=48.79  Aligned_cols=91  Identities=15%  Similarity=0.064  Sum_probs=58.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++++++.+.. ..        .+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~--lga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-EL--------LR--LGAAY-VIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HH--------HH--HTCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------Hh--CCCcE-EEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            588899999999988888999999999876621 11        11  12221 23444433   344444434799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +++|..  .....++.++...+++.++.
T Consensus       219 d~~g~~--~~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          219 DSIGGP--DGNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             ESSCHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCCh--hHHHHHHHhcCCCEEEEEee
Confidence            998853  23445566664467777764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.20  E-value=0.0032  Score=51.39  Aligned_cols=90  Identities=11%  Similarity=0.150  Sum_probs=58.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ..        .  ..+.. ...|..+.+.   +.+.....++|+||
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~--~~ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IV--------L--QNGAH-EVFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------H--HTTCS-EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HH--------H--HcCCC-EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            589999999999999999999999998865521 11        1  11222 2346655443   33333333799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +++|.  ......++.++...+++.++
T Consensus       245 ~~~G~--~~~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          245 EMLAN--VNLSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ECCCh--HHHHHHHHhccCCCEEEEEe
Confidence            99985  23445566666445777666

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.17  E-value=0.0039  Score=50.68  Aligned_cols=91  Identities=15%  Similarity=0.173  Sum_probs=53.3

Q ss_pred             CCccccchHHHHHHHHHcC-----C-eEEEEEcCCCc--ccc-CCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKAP--IAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~-~V~~l~r~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (265)
                      .||||++|+.+++.|.+++     + +++++.+..+.  ... ..+..     .. ...+.+  .|+ +.+    .+.  
T Consensus        15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l-----~~-~~~~~~--~~~-~~~----~~~--   79 (352)
T 2nqt_A           15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHL-----TP-LAHRVV--EPT-EAA----VLG--   79 (352)
T ss_dssp             ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTC-----GG-GTTCBC--EEC-CHH----HHT--
T ss_pred             ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccc-----cc-cceeee--ccC-CHH----Hhc--
Confidence            4999999999999999887     3 77887654322  111 11110     00 011111  122 222    345  


Q ss_pred             CccEEEEcCCCCccchHHHHHhCCCCCcEEEEeccee
Q 024575           72 GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        72 ~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      ++|+||.+.+...  ...++..++...++|-+|+..-
T Consensus        80 ~~DvVf~alg~~~--s~~~~~~~~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           80 GHDAVFLALPHGH--SAVLAQQLSPETLIIDCGADFR  114 (352)
T ss_dssp             TCSEEEECCTTSC--CHHHHHHSCTTSEEEECSSTTT
T ss_pred             CCCEEEECCCCcc--hHHHHHHHhCCCEEEEECCCcc
Confidence            8999999987643  4455555553357888887653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.14  E-value=0.0027  Score=52.97  Aligned_cols=67  Identities=19%  Similarity=0.292  Sum_probs=54.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~   81 (265)
                      |-|.+|+.+++.|.+.|++|+++++++.... .+.          ..++.++.+|.++++.+.++ +.  ++|+||-+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~-~~~----------~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIE-TLR----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHH-HHH----------HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHH----------hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence            4599999999999999999999999977621 111          25788999999999998877 55  8999997765


Q ss_pred             C
Q 024575           82 R   82 (265)
Q Consensus        82 ~   82 (265)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.06  E-value=0.0069  Score=46.58  Aligned_cols=95  Identities=14%  Similarity=0.178  Sum_probs=61.8

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHh---hccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~~~d~v   76 (265)
                      +|++|.+|+.+++.+.+. ++++++..........         +.  ..+.. +..|++.++...+.+   .+.+.++|
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~---------~~--~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V   73 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSL---------LT--DGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   73 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHH---------HH--HTTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHH---------Hh--ccCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence            488999999999999876 8999987765432110         00  11333 677888876655433   23589999


Q ss_pred             EEcCCCCccchHHHHHhCC-C-CCcEEEEecce
Q 024575           77 YDINGREADEVEPILDALP-N-LEQFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~-~-~~~~v~~Ss~~  107 (265)
                      +-+.|.+......+.++++ . ...+++.+..+
T Consensus        74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~s  106 (245)
T 1p9l_A           74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPNFA  106 (245)
T ss_dssp             ECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCC
T ss_pred             EcCCCCCHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence            9988877665555556655 3 44566665533

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.96  E-value=0.0027  Score=51.96  Aligned_cols=91  Identities=13%  Similarity=0.187  Sum_probs=58.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|+ |.+|+.+++.|...|.+|++++|++.+.. .+.       ......+.   ....+.+.+.+.+.  ++|+||++.
T Consensus       173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~-~~~-------~~~~~~~~---~~~~~~~~~~~~~~--~~DvVI~~~  238 (361)
T 1pjc_A          173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS-YLE-------TLFGSRVE---LLYSNSAEIETAVA--EADLLIGAV  238 (361)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH-------HHHGGGSE---EEECCHHHHHHHHH--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHH-------HhhCceeE---eeeCCHHHHHHHHc--CCCEEEECC
Confidence            366 99999999999999999999999866521 110       00011121   12234566777777  999999998


Q ss_pred             CCCcc-----chHHHHHhCCCCCcEEEEec
Q 024575           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~-----~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +....     -....++.++....++-++.
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~  268 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAV  268 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence            76331     14456666775556776664

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.96  E-value=0.034  Score=44.45  Aligned_cols=84  Identities=14%  Similarity=0.193  Sum_probs=58.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++...                .++...    ...+++.+++.  +.|+|+.+...
T Consensus       146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~----~~~~~l~ell~--~aDiV~l~~Pl  203 (315)
T 3pp8_A          146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESY----VGREELRAFLN--QTRVLINLLPN  203 (315)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEE----ESHHHHHHHHH--TCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhh----cccCCHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999986641                222211    12367888898  99999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++...-||.+|...+
T Consensus       204 t~~t~~li~~~~l~~mk~gailIN~aRG~~  233 (315)
T 3pp8_A          204 TAQTVGIINSELLDQLPDGAYVLNLARGVH  233 (315)
T ss_dssp             CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence            422  1  2345566665567777775443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.95  E-value=0.029  Score=44.50  Aligned_cols=93  Identities=10%  Similarity=0.033  Sum_probs=48.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCC--ChhHHhhhhccceEEEecCCChHHHHHHhh-----c-cCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLS-----A-KGFD   74 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~-~~~d   74 (265)
                      |.|.+|..+++.|++.||+|++..|++++.......-  ......+......++..=+.+...+.+.+.     . ..-+
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~   91 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG   91 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence            5699999999999999999999999987743222110  001111122333444444444443333221     1 1345


Q ss_pred             EEEEcCCCCccchHHHHHhCC
Q 024575           75 VVYDINGREADEVEPILDALP   95 (265)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~~~~   95 (265)
                      ++|++....+..++.+.+.++
T Consensus        92 iiid~sT~~p~~~~~~~~~~~  112 (297)
T 4gbj_A           92 VHVSMSTISPETSRQLAQVHE  112 (297)
T ss_dssp             EEEECSCCCHHHHHHHHHHHH
T ss_pred             EEEECCCCChHHHHHHHHHHH
Confidence            677777777666666666554

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.92  E-value=0.021  Score=45.90  Aligned_cols=91  Identities=18%  Similarity=0.105  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH-HHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~d~vi~~   79 (265)
                      +||+|.+|...++.+...|.+|+++++++.+.. ..        .  .-+...+ .|..+.+ ...+.+...++|+||++
T Consensus       156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~--------~--~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~  223 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YL--------R--VLGAKEV-LAREDVMAERIRPLDKQRWAAAVDP  223 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HH--------H--HTTCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HH--------H--HcCCcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence            588999999999998889999999999866521 11        1  1233222 3444331 11122232379999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEec
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +|.  ......++.++...+++.++.
T Consensus       224 ~g~--~~~~~~~~~l~~~G~~v~~G~  247 (328)
T 1xa0_A          224 VGG--RTLATVLSRMRYGGAVAVSGL  247 (328)
T ss_dssp             STT--TTHHHHHHTEEEEEEEEECSC
T ss_pred             CcH--HHHHHHHHhhccCCEEEEEee
Confidence            986  355666777774457776653

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.90  E-value=0.0062  Score=49.93  Aligned_cols=90  Identities=13%  Similarity=0.139  Sum_probs=61.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|+ |.+|..+++.+...|.+|+++++++.+......          .-+... ..|..+.+.+.++..  ++|+||+++
T Consensus       194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----------~lGa~~-v~~~~~~~~~~~~~~--~~D~vid~~  259 (366)
T 1yqd_A          194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK----------NFGADS-FLVSRDQEQMQAAAG--TLDGIIDTV  259 (366)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH----------TSCCSE-EEETTCHHHHHHTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hcCCce-EEeccCHHHHHHhhC--CCCEEEECC
Confidence            364 999999999998899999999988765211100          122322 246666666666655  899999999


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEec
Q 024575           81 GREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +... .....++.++...+++.+++
T Consensus       260 g~~~-~~~~~~~~l~~~G~iv~~g~  283 (366)
T 1yqd_A          260 SAVH-PLLPLFGLLKSHGKLILVGA  283 (366)
T ss_dssp             SSCC-CSHHHHHHEEEEEEEEECCC
T ss_pred             CcHH-HHHHHHHHHhcCCEEEEEcc
Confidence            8532 34566777774457887764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.90  E-value=0.0033  Score=50.29  Aligned_cols=74  Identities=11%  Similarity=0.128  Sum_probs=50.0

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCcc--ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +|+ |.+|++++..|.+.|. +|++..|++...  .+.+.    .++.. ..+..+...++.+.+.+.+.+.  ++|+||
T Consensus       160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la----~~~~~-~~~~~~~~~~~~~~~~l~~~l~--~aDiII  231 (315)
T 3tnl_A          160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTV----EKINS-KTDCKAQLFDIEDHEQLRKEIA--ESVIFT  231 (315)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEEE
T ss_pred             ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHH----HHhhh-hcCCceEEeccchHHHHHhhhc--CCCEEE
Confidence            365 8999999999999997 899999984321  11110    00110 1234455567777777888888  999999


Q ss_pred             EcCCC
Q 024575           78 DINGR   82 (265)
Q Consensus        78 ~~a~~   82 (265)
                      ++.+.
T Consensus       232 NaTp~  236 (315)
T 3tnl_A          232 NATGV  236 (315)
T ss_dssp             ECSST
T ss_pred             ECccC
Confidence            99764

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.87  E-value=0.018  Score=48.47  Aligned_cols=92  Identities=13%  Similarity=0.133  Sum_probs=58.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccce-EEE---ecCCC----------------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLK---GDRKD----------------   60 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~D~~~----------------   60 (265)
                      +||+|.+|...++.+...|.+|+++++++.+.. ..        .  .-+.. .+.   .|+.+                
T Consensus       227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~-~~--------~--~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA-AV--------R--ALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------H--HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------H--hcCCCEEEecccccccccccccccccchhhhHH
Confidence            589999999999999999999999998655421 11        1  11222 111   11110                


Q ss_pred             hHHHHHHhhccCccEEEEcCCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      .+.+.+.. ..++|+||+++|.  ......++.++...+++.+++.
T Consensus       296 ~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~~  338 (447)
T 4a0s_A          296 AKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGSS  338 (447)
T ss_dssp             HHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCCT
T ss_pred             HHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEecC
Confidence            12333333 3479999999985  3455667777755688887743

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.78  E-value=0.01  Score=47.14  Aligned_cols=93  Identities=11%  Similarity=0.069  Sum_probs=57.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCC--CChhHHhhhhccceEEEecCCChHHHHHHhhcc--------C
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G   72 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------~   72 (265)
                      |.|.+|..+++.|++.||+|++..|++++.......  .......+......++..=+.+.+.+++++...        .
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~   89 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   89 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence            579999999999999999999999987663211100  000111222244555555566666666665421        1


Q ss_pred             ccEEEEcCCCCccchHHHHHhCC
Q 024575           73 FDVVYDINGREADEVEPILDALP   95 (265)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~~~~   95 (265)
                      =+++|++....+..++.+.+.++
T Consensus        90 g~iiId~sT~~p~~~~~~a~~~~  112 (300)
T 3obb_A           90 GTLVLECSTIAPTSARKIHAAAR  112 (300)
T ss_dssp             -CEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            25677777777777777766655

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.65  E-value=0.0045  Score=50.11  Aligned_cols=66  Identities=14%  Similarity=-0.011  Sum_probs=53.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+.+++.|.+.|+ |++++++++...  +.          ..++.++.+|.++++.+.++ ++  ++|.|+-+.+
T Consensus       122 G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~  186 (336)
T 1lnq_A          122 GWSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLE  186 (336)
T ss_dssp             SCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCS
T ss_pred             CCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCC
Confidence            359999999999999999 999988776521  21          26789999999999999887 66  8999998876


Q ss_pred             CC
Q 024575           82 RE   83 (265)
Q Consensus        82 ~~   83 (265)
                      ..
T Consensus       187 ~d  188 (336)
T 1lnq_A          187 SD  188 (336)
T ss_dssp             SH
T ss_pred             cc
Confidence            43

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.64  E-value=0.024  Score=46.60  Aligned_cols=92  Identities=15%  Similarity=0.117  Sum_probs=55.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|...++.+...|.+|+++++ +.+ .+..        .  .-+... ..|..+.+..+++.+..++|+||+++
T Consensus       190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~-~~~~--------~--~lGa~~-v~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          190 LGASGGVGTFAIQVMKAWDAHVTAVCS-QDA-SELV--------R--KLGADD-VIDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG-HHHH--------H--HTTCSE-EEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH-HHHH--------H--HcCCCE-EEECCchHHHHHHhhcCCCCEEEECC
Confidence            488999999999998888999998874 322 1111        1  123332 23555443333333324799999999


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEec
Q 024575           81 GREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |.........++.++...+++.++.
T Consensus       257 g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          257 GGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             CChhhhhHHHHHhhcCCcEEEEeCC
Confidence            8642222333444555567877764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.61  E-value=0.017  Score=48.85  Aligned_cols=91  Identities=12%  Similarity=0.186  Sum_probs=58.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-------------h------
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------Y------   61 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~------   61 (265)
                      +||+|.+|...++.+...|.+|+++++++.+. +.+.          .-++..+ .|..+             .      
T Consensus       235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~-~~~~----------~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          235 WGASGGLGSYATQFALAGGANPICVVSSPQKA-EICR----------AMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH----------HHTCCEE-EETTTTTCCSEEETTEECHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH-HHHH----------hhCCcEE-EecCcCcccccccccccchHHHHHH
Confidence            58899999999999988999999999765442 1111          1222221 22222             1      


Q ss_pred             -HHHHHHhhccCccEEEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           62 -DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        62 -~~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                       +.+.++....++|+||+++|.  ......++.++...+++.++.
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  345 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS  345 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence             334444433589999999885  445566677774457777664

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.59  E-value=0.014  Score=49.07  Aligned_cols=30  Identities=23%  Similarity=0.447  Sum_probs=27.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |+|++|..++..|++.|++|++.+|++.+.
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            679999999999999999999999998873

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.51  E-value=0.0053  Score=48.12  Aligned_cols=29  Identities=17%  Similarity=0.109  Sum_probs=23.3

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCC
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGK   29 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~   29 (265)
                      +|++|.+|+.+++.+.+. ++++++..+.+
T Consensus        11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~~   40 (273)
T 1dih_A           11 AGAGGRMGRQLIQAALALEGVQLGAALERE   40 (273)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            589999999999998865 78888665543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.49  E-value=0.04  Score=43.79  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (265)
                      +||..|.++++.++++|++|+.+.+..+
T Consensus        63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           63 SSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            3599999999999999999999999654

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.38  E-value=0.032  Score=44.06  Aligned_cols=81  Identities=16%  Similarity=0.046  Sum_probs=57.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++...                ..+.       ..+++.+++.  +.|+|+.+...
T Consensus       129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~-------~~~~l~ell~--~aDiV~l~~P~  183 (290)
T 3gvx_A          129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQ----------------NVDV-------ISESPADLFR--QSDFVLIAIPL  183 (290)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSCCCT----------------TCSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccCchhHHHHHHHHhhCcEEEEEecccccc----------------cccc-------ccCChHHHhh--ccCeEEEEeec
Confidence            569999999999999999999999886552                1111       1235667777  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....++.++....+|.+|+..+
T Consensus       184 t~~t~~li~~~~l~~mk~gailIN~aRG~~  213 (290)
T 3gvx_A          184 TDKTRGMVNSRLLANARKNLTIVNVARADV  213 (290)
T ss_dssp             CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred             cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence            322  1  2456667776667888886543

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.36  E-value=0.065  Score=42.99  Aligned_cols=84  Identities=12%  Similarity=0.109  Sum_probs=57.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|++|++.+|++... ..+.              ..+     ..+++.+++.  +.|+|+.+...
T Consensus       144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-~~~~--------------~~~-----~~~~l~ell~--~aDvV~l~lPl  201 (324)
T 3evt_A          144 GTGQIGQSLAAKASALGMHVIGVNTTGHPA-DHFH--------------ETV-----AFTATADALA--TANFIVNALPL  201 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSCCCC-TTCS--------------EEE-----EGGGCHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEECCCcchh-HhHh--------------hcc-----ccCCHHHHHh--hCCEEEEcCCC
Confidence            569999999999999999999999986552 1111              011     1245567777  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++....||.+|...+
T Consensus       202 t~~t~~li~~~~l~~mk~gailIN~aRG~~  231 (324)
T 3evt_A          202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA  231 (324)
T ss_dssp             CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred             chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence            322  1  2456677776667888886553

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.30  E-value=0.034  Score=45.76  Aligned_cols=91  Identities=11%  Similarity=0.015  Sum_probs=60.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|+ |.+|+.+++.+...|.+|++.+|++.+.. .+        .+ ..+..+ ..+..+.+++.+.+.  ++|+||+++
T Consensus       174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~-~~--------~~-~~g~~~-~~~~~~~~~l~~~l~--~aDvVi~~~  239 (377)
T 2vhw_A          174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLR-QL--------DA-EFCGRI-HTRYSSAYELEGAVK--RADLVIGAV  239 (377)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------HH-HTTTSS-EEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HH--------HH-hcCCee-EeccCCHHHHHHHHc--CCCEEEECC
Confidence            365 99999999999999999999999865421 00        00 011111 223345667778887  899999987


Q ss_pred             CCCcc-----chHHHHHhCCCCCcEEEEec
Q 024575           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~-----~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +....     -....++.++....+|.++.
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            65321     14566777775567888874

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=95.28  E-value=0.0078  Score=50.77  Aligned_cols=29  Identities=14%  Similarity=0.351  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|++|..++..|.+.|++|++++|++.+
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            57999999999999999999999998765

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.27  E-value=0.033  Score=38.71  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             Ccc---ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |+|   |.+|..+++.|.+.||+|+...++..+.                .++.       -..++.++..  .+|+++-
T Consensus        21 GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~-------~~~s~~el~~--~vDlvii   75 (138)
T 1y81_A           21 GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLK-------CYRSVRELPK--DVDVIVF   75 (138)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-------CBSSGGGSCT--TCCEEEE
T ss_pred             eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCee-------ecCCHHHhCC--CCCEEEE
Confidence            555   8899999999999999977766553221                1221       1222333444  7899998


Q ss_pred             cCCCCccchHHHHHhC-C-CCCcEEEEe
Q 024575           79 INGREADEVEPILDAL-P-NLEQFIYCS  104 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~-~-~~~~~v~~S  104 (265)
                      +..  ......+++.+ + +.+.++..+
T Consensus        76 ~vp--~~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           76 VVP--PKVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             CSC--HHHHHHHHHHHHHTTCCEEEECT
T ss_pred             EeC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence            866  34555555443 3 665555444

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.24  E-value=0.006  Score=49.54  Aligned_cols=90  Identities=17%  Similarity=0.322  Sum_probs=56.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (265)
                      +||+|.+|...++.+...|.+|+++ +++.+ .+..        .  .-+...+. +-.+ .+.+.+.....++|+||++
T Consensus       157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~-~~~~--------~--~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          157 QGGGGGVGHVAIQIALARGARVFAT-ARGSD-LEYV--------R--DLGATPID-ASREPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH-HHHH--------H--HHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH-HHHH--------H--HcCCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence            4889999999999999999999998 55443 1111        1  12444422 2122 2334444443579999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEec
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +|.  ......++.++...+++.++.
T Consensus       224 ~g~--~~~~~~~~~l~~~G~iv~~g~  247 (343)
T 3gaz_A          224 LGG--PVLDASFSAVKRFGHVVSCLG  247 (343)
T ss_dssp             SCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred             CCc--HHHHHHHHHHhcCCeEEEEcc
Confidence            984  445566666774457776653

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.21  E-value=0.0074  Score=50.75  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|++|..++..|.+.|++|++++|++.+
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            57999999999999999999999998765

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.18  E-value=0.049  Score=44.48  Aligned_cols=89  Identities=17%  Similarity=0.176  Sum_probs=58.7

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC--C-hHHHHHHhhccCccEEEE
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~~~d~vi~   78 (265)
                      | +|.+|...++.+...|.+|+++++++.+.. ..        .  .-++..+ .|..  + .+.+.++....++|+||+
T Consensus       197 G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~--------~--~lGa~~v-i~~~~~~~~~~v~~~~~g~g~D~vid  263 (363)
T 3uog_A          197 G-TGGVALFGLQIAKATGAEVIVTSSSREKLD-RA--------F--ALGADHG-INRLEEDWVERVYALTGDRGADHILE  263 (363)
T ss_dssp             S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------H--HHTCSEE-EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             C-CCHHHHHHHHHHHHcCCEEEEEecCchhHH-HH--------H--HcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEE
Confidence            6 799999999998888999999998765521 11        1  1233222 2322  1 233444444447999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++|  .......++.++...+++.++.
T Consensus       264 ~~g--~~~~~~~~~~l~~~G~iv~~G~  288 (363)
T 3uog_A          264 IAG--GAGLGQSLKAVAPDGRISVIGV  288 (363)
T ss_dssp             ETT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred             CCC--hHHHHHHHHHhhcCCEEEEEec
Confidence            998  4566777788885567887764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.14  E-value=0.015  Score=45.95  Aligned_cols=29  Identities=31%  Similarity=0.547  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.++..|.+.|++|++.+|++++
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEK   36 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            56999999999999999999999998766

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.02  E-value=0.0063  Score=51.50  Aligned_cols=69  Identities=16%  Similarity=0.295  Sum_probs=53.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+++++.|.++|++|+++.++++... .+.        + .-++..+.+|-++++.+.++=- .++|.++-+.+.
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~-~~~--------~-~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~~   78 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLR-ELQ--------D-KYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTNT   78 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHH-HHH--------H-HSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHH--------H-hcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcCC
Confidence            5699999999999999999999999876621 111        0 2468899999999999987643 289998866543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.98  E-value=0.012  Score=47.18  Aligned_cols=29  Identities=28%  Similarity=0.465  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|.+.|++|++.+|++++
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            56999999999999999999999998765

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.94  E-value=0.19  Score=38.72  Aligned_cols=105  Identities=17%  Similarity=0.122  Sum_probs=60.5

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC----------C----ChhHHhhhhccceEEEecC-CChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG----------E----SDQEFAEFSSKILHLKGDR-KDYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~D~-~~~~~~~~   66 (265)
                      |.|.+|+++++.|...|. ++.+++++.-.....-..          .    ....+....+.+++...+. .+.+.+.+
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~  114 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKD  114 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHH
Confidence            457899999999999995 777777665332111110          0    1122223334444433322 24466778


Q ss_pred             HhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEecceeee
Q 024575           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      ++.  ++|+||++.. +...-..+-++|. ..+.+|+.+..+.+|
T Consensus       115 ~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~~p~i~~~~~g~~G  156 (251)
T 1zud_1          115 AVA--RADVVLDCTD-NMATRQEINAACVALNTPLITASAVGFGG  156 (251)
T ss_dssp             HHH--HCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred             HHh--cCCEEEECCC-CHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence            888  8999999865 3332223344455 556788877655443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.92  E-value=0.048  Score=43.23  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=26.2

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (265)
                      ||.|.+|..++..|.+.|++|++.+|++.
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            57999999999999999999999988754

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=94.91  E-value=0.028  Score=45.56  Aligned_cols=91  Identities=11%  Similarity=0.006  Sum_probs=51.4

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      .||||++|+.+++.|.+++ .+++++.+.... ...+.+...    .+ .+..  ...+.+.+   + +.  ++|+||.+
T Consensus        10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~~~----~~-~g~~--~~~~~~~~---~-~~--~vDvV~~a   75 (345)
T 2ozp_A           10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFVHP----NL-RGRT--NLKFVPPE---K-LE--PADILVLA   75 (345)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGTCG----GG-TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHhCc----hh-cCcc--cccccchh---H-hc--CCCEEEEc
Confidence            4899999999999999875 488887764332 111111000    00 0100  11122222   2 34  89999999


Q ss_pred             CCCCccchHHHHHh-CCCCCcEEEEecce
Q 024575           80 NGREADEVEPILDA-LPNLEQFIYCSSAG  107 (265)
Q Consensus        80 a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~  107 (265)
                      .+...  ...++.. ++...++|-+|+..
T Consensus        76 ~g~~~--s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           76 LPHGV--FAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             CCTTH--HHHTHHHHHTTCSEEEECSSTT
T ss_pred             CCcHH--HHHHHHHHHHCCCEEEEcCccc
Confidence            87642  3333333 34445688888753

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=94.90  E-value=0.0093  Score=48.68  Aligned_cols=87  Identities=10%  Similarity=0.095  Sum_probs=47.1

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||++|+.|++.|.++++   +++.+...... ...+.          ..+.....-++. .+    .+.  ++|+||
T Consensus         8 vGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~----------~~~~~~~~~~~~-~~----~~~--~~Dvvf   69 (366)
T 3pwk_A            8 VGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK----------FKDQDITIEETT-ET----AFE--GVDIAL   69 (366)
T ss_dssp             ETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEECC-TT----TTT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcce----------ecCCCceEeeCC-HH----Hhc--CCCEEE
Confidence            49999999999999998765   34444432221 11110          011111112221 12    244  899999


Q ss_pred             EcCCCCccchHHHHHh-CCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDA-LPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~  107 (265)
                      .+.+.  ......... ++...++|-+|+..
T Consensus        70 ~a~~~--~~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           70 FSAGS--STSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCh--HhHHHHHHHHHHCCCEEEEcCCcc
Confidence            99863  223344433 33334678788754

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.89  E-value=0.015  Score=47.47  Aligned_cols=29  Identities=24%  Similarity=0.371  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|.+.|++|++.+|++.+
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~   57 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNA   57 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=94.84  E-value=0.07  Score=42.81  Aligned_cols=84  Identities=12%  Similarity=0.076  Sum_probs=55.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|++|++.+|++... .               .+.-.    ....++.+++.  +.|+|+.+...
T Consensus       147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-~---------------~~~~~----~~~~~l~ell~--~aDvV~l~lPl  204 (324)
T 3hg7_A          147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRER-A---------------GFDQV----YQLPALNKMLA--QADVIVSVLPA  204 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCC-T---------------TCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHhCCCEEEEEcCChHHh-h---------------hhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence            579999999999999999999999886431 1               11101    12456778888  99999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++...-+|.+|...+
T Consensus       205 t~~T~~li~~~~l~~mk~gailIN~aRG~~  234 (324)
T 3hg7_A          205 TRETHHLFTASRFEHCKPGAILFNVGRGNA  234 (324)
T ss_dssp             CSSSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence            422  1  1123344555556777776543

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=94.80  E-value=0.023  Score=44.40  Aligned_cols=29  Identities=14%  Similarity=0.162  Sum_probs=23.4

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEE-EcCC
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGK   29 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l-~r~~   29 (265)
                      +|++|.+|+.+++.+.+. +.++++. +|+.
T Consensus        13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A           13 AGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            488999999999999876 6788875 5553

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.80  E-value=0.033  Score=45.18  Aligned_cols=91  Identities=14%  Similarity=0.082  Sum_probs=57.5

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~v   76 (265)
                      +|+ |.+|..+++.+...|. +|+++++++.+. +..        .  .-++.. ..|..+.+   .+.++....++|+|
T Consensus       174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~--------~--~~Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELA--------K--KVGADY-VINPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHH--------H--HHTCSE-EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHH--------H--HhCCCE-EECCCCcCHHHHHHHHcCCCCCCEE
Confidence            478 9999999999988998 999999876542 111        1  123322 23444432   23333333479999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |++++. .......++.++...+++.+++
T Consensus       241 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          241 LEFSGA-PKALEQGLQAVTPAGRVSLLGL  268 (348)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEcc
Confidence            999884 2344566677774457887764

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.77  E-value=0.022  Score=42.88  Aligned_cols=59  Identities=24%  Similarity=0.215  Sum_probs=41.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|.+|+.+++.|.+.|++|++.+|+++... .+.          ..++...        ++.+++.  ++|+||.+...
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~-~~~----------~~g~~~~--------~~~~~~~--~~DvVi~av~~   93 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTA-RLF----------PSAAQVT--------FQEEAVS--SPEVIFVAVFR   93 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHH-HHS----------BTTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HcCCcee--------cHHHHHh--CCCEEEECCCh
Confidence            3899999999999999999999999865421 111          1233321        2445666  89999988764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=94.75  E-value=0.14  Score=39.44  Aligned_cols=102  Identities=11%  Similarity=0.108  Sum_probs=59.8

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC----------C----ChhHHhhhhccc--eEEEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG----------E----SDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~----------~----~~~~~~~~~~~~--~~~~~D~~~~~~~~   65 (265)
                      |.|.+|+.+++.|...|. ++++++++.-+....-..          .    ....+....+.+  +.+..+++ .+.+.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~  116 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA  116 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence            468999999999999996 888888876331111000          0    011222223343  34444454 45667


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHHHhCC-CCCcEEEEeccee
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~~  108 (265)
                      +.+.  ++|+||.+... ...-..+.+++. ..+.+|+.+..+.
T Consensus       117 ~~~~--~~DvVi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~  157 (249)
T 1jw9_B          117 ALIA--EHDLVLDCTDN-VAVRNQLNAGCFAAKVPLVSGAAIRM  157 (249)
T ss_dssp             HHHH--TSSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEEEBT
T ss_pred             HHHh--CCCEEEEeCCC-HHHHHHHHHHHHHcCCCEEEeeeccc
Confidence            7788  99999998753 332233444455 4456777655443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=94.74  E-value=0.011  Score=47.95  Aligned_cols=89  Identities=10%  Similarity=0.034  Sum_probs=57.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +|+ |.+|..+++.+...|.+|++++|++.+.. ..        .  ..++.. ..|..+.+   .+.+..  .++|+||
T Consensus       171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~--~lGa~~-~~d~~~~~~~~~~~~~~--~~~d~vi  235 (339)
T 1rjw_A          171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LA--------K--ELGADL-VVNPLKEDAAKFMKEKV--GGVHAAV  235 (339)
T ss_dssp             ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HH--------H--HTTCSE-EECTTTSCHHHHHHHHH--SSEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------H--HCCCCE-EecCCCccHHHHHHHHh--CCCCEEE
Confidence            477 77999999999999999999998765521 11        1  123332 24655432   333333  3899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++++. .......++.++...+++.++.
T Consensus       236 d~~g~-~~~~~~~~~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          236 VTAVS-KPAFQSAYNSIRRGGACVLVGL  262 (339)
T ss_dssp             ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCC-HHHHHHHHHHhhcCCEEEEecc
Confidence            99874 2344566677774457777664

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.70  E-value=0.038  Score=45.05  Aligned_cols=93  Identities=20%  Similarity=0.299  Sum_probs=52.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      .||+|++|+.+++.|.+++ .+++++.+..+. ...+..    ....+...+   ..|+.-.+  .+.+.  ++|+||.+
T Consensus        22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~~----~~~~~~~~v---~~dl~~~~--~~~~~--~vDvVf~a   89 (359)
T 1xyg_A           22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSMES----VFPHLRAQK---LPTLVSVK--DADFS--TVDAVFCC   89 (359)
T ss_dssp             ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHHH----HCGGGTTSC---CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred             ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHHH----hCchhcCcc---cccceecc--hhHhc--CCCEEEEc
Confidence            4899999999999999885 588888765322 111100    000000111   13333222  33445  89999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      .+...  .......++...++|-.|+..
T Consensus        90 tp~~~--s~~~a~~~~aG~~VId~sa~~  115 (359)
T 1xyg_A           90 LPHGT--TQEIIKELPTALKIVDLSADF  115 (359)
T ss_dssp             CCTTT--HHHHHHTSCTTCEEEECSSTT
T ss_pred             CCchh--HHHHHHHHhCCCEEEECCccc
Confidence            86532  333444445334688788743

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=94.63  E-value=0.014  Score=47.23  Aligned_cols=86  Identities=19%  Similarity=0.104  Sum_probs=47.2

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEc-CCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      .||||++|+.+++.|.++++   +++++.. +.....-.+            .+..+...|. +++    .+.  ++|+|
T Consensus        12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~------------~g~~i~~~~~-~~~----~~~--~~DvV   72 (340)
T 2hjs_A           12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF------------AESSLRVGDV-DSF----DFS--SVGLA   72 (340)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE------------TTEEEECEEG-GGC----CGG--GCSEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcccc------------CCcceEEecC-CHH----Hhc--CCCEE
Confidence            48999999999999996654   5566643 222100000            1111111222 122    244  89999


Q ss_pred             EEcCCCCccchHHHHHhCC-CCCcEEEEecce
Q 024575           77 YDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~  107 (265)
                      |.+.+..  .....+..+. ...++|.+|+..
T Consensus        73 ~~a~g~~--~s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           73 FFAAAAE--VSRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             EECSCHH--HHHHHHHHHHHTTCEEEETTCTT
T ss_pred             EEcCCcH--HHHHHHHHHHHCCCEEEEeCCCC
Confidence            9998743  2344444433 333577777654

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=94.62  E-value=0.083  Score=42.16  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=54.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|+....                .      .+   ..++.+++.  +.|+|+.+...
T Consensus       151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~----------------~------~~---~~~l~ell~--~aDvV~l~~p~  203 (311)
T 2cuk_A          151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL----------------P------YP---FLSLEELLK--EADVVSLHTPL  203 (311)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------S------SC---BCCHHHHHH--HCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHHCCCEEEEECCCCccc----------------c------cc---cCCHHHHHh--hCCEEEEeCCC
Confidence            569999999999999999999999876551                1      12   234556777  89999988655


Q ss_pred             Cc--cch--HHHHHhCCCCCcEEEEecce
Q 024575           83 EA--DEV--EPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~--~~~--~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +.  .+.  ...+..++....+|.+|+..
T Consensus       204 ~~~t~~li~~~~l~~mk~ga~lin~srg~  232 (311)
T 2cuk_A          204 TPETHRLLNRERLFAMKRGAILLNTARGA  232 (311)
T ss_dssp             CTTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             ChHHHhhcCHHHHhhCCCCcEEEECCCCC
Confidence            42  111  24556666556777777644

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=94.60  E-value=0.065  Score=43.28  Aligned_cols=81  Identities=17%  Similarity=0.077  Sum_probs=53.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++...                .+..       ...++.++++  +.|+|+.+...
T Consensus       178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~-------~~~sl~ell~--~aDvVil~vP~  232 (340)
T 4dgs_A          178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWI-------AHQSPVDLAR--DSDVLAVCVAA  232 (340)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCE-------ECSSHHHHHH--TCSEEEECC--
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCce-------ecCCHHHHHh--cCCEEEEeCCC
Confidence            569999999999999999999999876541                1111       1234667787  99999988764


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....++.++....+|-+|...+
T Consensus       233 t~~t~~li~~~~l~~mk~gailIN~aRG~v  262 (340)
T 4dgs_A          233 SAATQNIVDASLLQALGPEGIVVNVARGNV  262 (340)
T ss_dssp             --------CHHHHHHTTTTCEEEECSCC--
T ss_pred             CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence            321  1  1355666776667787776554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.57  E-value=0.036  Score=43.43  Aligned_cols=60  Identities=15%  Similarity=0.129  Sum_probs=42.6

Q ss_pred             cccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      +|.+|++++..|.+.|. +|++..|+.++. ..+.           ..+..     ...+++.+++.  ++|+||++.+.
T Consensus       125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a-~~la-----------~~~~~-----~~~~~~~~~~~--~aDiVInaTp~  185 (277)
T 3don_A          125 AGGASKGIANELYKIVRPTLTVANRTMSRF-NNWS-----------LNINK-----INLSHAESHLD--EFDIIINTTPA  185 (277)
T ss_dssp             CSHHHHHHHHHHHTTCCSCCEEECSCGGGG-TTCC-----------SCCEE-----ECHHHHHHTGG--GCSEEEECCC-
T ss_pred             CcHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHH-----------Hhccc-----ccHhhHHHHhc--CCCEEEECccC
Confidence            48999999999999998 899999987763 2222           11111     13455666677  89999999754

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.55  E-value=0.03  Score=44.90  Aligned_cols=90  Identities=17%  Similarity=0.145  Sum_probs=56.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|...++.+...|.+|+++++++.+. +.+        .+  -+...+ .|..+.+.+ +.+...++|+||++.
T Consensus       153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~-~~~--------~~--lGa~~v-i~~~~~~~~-~~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYL--------KS--LGANRI-LSRDEFAES-RPLEKQLWAGAIDTV  219 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHH--------HH--HTCSEE-EEGGGSSCC-CSSCCCCEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH--------Hh--cCCCEE-EecCCHHHH-HhhcCCCccEEEECC
Confidence            58899999999999998999999999886652 111        11  122211 233332221 222234799999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEec
Q 024575           81 GREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |..  .....++.++...+++.++.
T Consensus       220 g~~--~~~~~~~~l~~~G~iv~~G~  242 (324)
T 3nx4_A          220 GDK--VLAKVLAQMNYGGCVAACGL  242 (324)
T ss_dssp             CHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             CcH--HHHHHHHHHhcCCEEEEEec
Confidence            742  45556666665567777764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.51  E-value=0.019  Score=45.87  Aligned_cols=29  Identities=31%  Similarity=0.488  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|.+.|++|++.+|++++
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57999999999999999999999998766

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.48  E-value=0.029  Score=44.39  Aligned_cols=84  Identities=18%  Similarity=0.188  Sum_probs=56.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|++.+|++.+.. .        ..  ..++..+     +.+++.+++.  +.|+|+.+...
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~-~--------~~--~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  223 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLA-R--------IA--EMGMEPF-----HISKAAQELR--DVDVCINTIPA  223 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHH-H--------HH--HTTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHH-H--------HH--HCCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence            4699999999999999999999999764411 0        00  1233322     2345667777  99999998865


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ..-. ...++.++....+|.++.
T Consensus       224 ~~i~-~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          224 LVVT-ANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CCBC-HHHHHHSCTTCEEEECSS
T ss_pred             HHhC-HHHHHhcCCCCEEEEecC
Confidence            4332 346667775556666663

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=94.47  E-value=0.019  Score=44.85  Aligned_cols=30  Identities=17%  Similarity=0.022  Sum_probs=26.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +|+ |.+|++++..|.+.|.+|++..|+.++
T Consensus       125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~  154 (271)
T 1nyt_A          125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR  154 (271)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            466 789999999999999999999998655

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.47  E-value=0.012  Score=46.38  Aligned_cols=29  Identities=31%  Similarity=0.497  Sum_probs=26.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|.+.|++|++.+|++++
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAK   36 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGG
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998776

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=94.46  E-value=0.12  Score=41.12  Aligned_cols=79  Identities=16%  Similarity=0.112  Sum_probs=54.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++.. .                +       .....++.+++.  +.|+|+.+...
T Consensus       131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~----------------~-------~~~~~~l~ell~--~aDvV~l~~P~  184 (303)
T 1qp8_A          131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G----------------P-------WRFTNSLEEALR--EARAAVCALPL  184 (303)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S----------------S-------SCCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCccc-c----------------C-------cccCCCHHHHHh--hCCEEEEeCcC
Confidence            57999999999999999999999887651 1                0       011123456777  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..  +  ....+..++....+|-+|+..
T Consensus       185 ~~~t~~~i~~~~l~~mk~gailin~srg~  213 (303)
T 1qp8_A          185 NKHTRGLVKYQHLALMAEDAVFVNVGRAE  213 (303)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             chHHHHHhCHHHHhhCCCCCEEEECCCCc
Confidence            421  1  134666677666788888644

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=94.45  E-value=0.042  Score=46.60  Aligned_cols=28  Identities=21%  Similarity=0.388  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHc-CC-eEEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA   30 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~-~V~~l~r~~~   30 (265)
                      |.|++|..++..|++. |+ +|++.+|+++
T Consensus        25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            6799999999999999 99 9999999988

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.42  E-value=0.0055  Score=48.36  Aligned_cols=31  Identities=13%  Similarity=0.266  Sum_probs=27.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +|+||.+|+.+++.|.+.|++|++.+|++..
T Consensus        17 IG~tG~mG~~la~~l~~~g~~V~~~~r~~~~   47 (286)
T 3c24_A           17 LGAGGKMGARITRKIHDSAHHLAAIEIAPEG   47 (286)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEECCSHHH
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            3667999999999999999999999887654

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=94.39  E-value=0.14  Score=41.43  Aligned_cols=82  Identities=16%  Similarity=0.155  Sum_probs=58.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|++....   .           ..+.+        .++.+++.  +.|+|+.+...
T Consensus       155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~-----------~~~~~--------~~l~ell~--~aDvV~l~~Pl  210 (343)
T 2yq5_A          155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---E-----------PFLTY--------TDFDTVLK--EADIVSLHTPL  210 (343)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG---T-----------TTCEE--------CCHHHHHH--HCSEEEECCCC
T ss_pred             ecCHHHHHHHHHHhhCCCEEEEECCChhhhh---h-----------ccccc--------cCHHHHHh--cCCEEEEcCCC
Confidence            5699999999999999999999999875411   0           12221        14567777  89999988765


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..    -....+..++...-||-+|...+
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~aRg~~  240 (343)
T 2yq5_A          211 FPSTENMIGEKQLKEMKKSAYLINCARGEL  240 (343)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence            322    12456777886678888886554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=94.37  E-value=0.19  Score=40.69  Aligned_cols=91  Identities=11%  Similarity=0.009  Sum_probs=57.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC----hHHHHHHhh---ccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLS---AKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~---~~~~   73 (265)
                      +|+ |.+|...++.+...|.+|+++++++.+. +..        .  .-++.. ..|..+    .+.+.+...   ..++
T Consensus       175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~--------~--~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL-EVA--------K--NCGADV-TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHH--------H--HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHH--------H--HhCCCE-EEcCcccccHHHHHHHHhccccCCCC
Confidence            365 8999999998888899999988876552 111        1  123321 234432    234444442   2479


Q ss_pred             cEEEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |+||++++.. ......++.++...+++.++.
T Consensus       242 D~vid~~g~~-~~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          242 NVTIDCSGNE-KCITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             SEEEECSCCH-HHHHHHHHHSCTTCEEEECSC
T ss_pred             CEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999998752 234566777885568887763

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=94.29  E-value=0.07  Score=43.68  Aligned_cols=87  Identities=17%  Similarity=0.223  Sum_probs=47.0

Q ss_pred             CCccccchHHHHH-HHHHcC---CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~-~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.|++ .|.++.   .+++.++.+...  ..+...         .+......+..+.+.    +.  ++|+|
T Consensus        10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~~---------~~~~~~v~~~~~~~~----~~--~vDvv   72 (377)
T 3uw3_A           10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAG--GKAPSF---------AKNETTLKDATSIDD----LK--KCDVI   72 (377)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTT--SBCCTT---------CCSCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcC--CCHHHc---------CCCceEEEeCCChhH----hc--CCCEE
Confidence            4999999999999 666666   366666543221  122110         111111123333333    34  99999


Q ss_pred             EEcCCCCccchHHHHHh-CC-CCC-cEEEEecc
Q 024575           77 YDINGREADEVEPILDA-LP-NLE-QFIYCSSA  106 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~-~~-~~~-~~v~~Ss~  106 (265)
                      |.+.+..  ........ ++ +++ ++|=.|+.
T Consensus        73 f~a~~~~--~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           73 ITCQGGD--YTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             EECSCHH--HHHHHHHHHHHTTCCSEEEECSST
T ss_pred             EECCChH--HHHHHHHHHHHCCCCEEEEeCCcc
Confidence            9998742  23333333 23 553 66666653

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=94.28  E-value=0.053  Score=43.94  Aligned_cols=90  Identities=10%  Similarity=0.070  Sum_probs=55.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vi~   78 (265)
                      +||+|.+|...++.+...|.+|+++++++.+. +.+        .+  -+...+ .|..+  .+.+.+. ...++|+||+
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~--------~~--lGa~~v-i~~~~~~~~~~~~~-~~~g~Dvv~d  223 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETI-EWT--------KK--MGADIV-LNHKESLLNQFKTQ-GIELVDYVFC  223 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHH--------HH--HTCSEE-ECTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH--------Hh--cCCcEE-EECCccHHHHHHHh-CCCCccEEEE
Confidence            48999999999999998999999999876542 111        11  122221 23332  2334443 3347999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           79 INGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +++. .......++.++...+++.++
T Consensus       224 ~~g~-~~~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          224 TFNT-DMYYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             SSCH-HHHHHHHHHHEEEEEEEEESS
T ss_pred             CCCc-hHHHHHHHHHhccCCEEEEEC
Confidence            9874 222355667777445676554

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=94.23  E-value=0.019  Score=46.45  Aligned_cols=87  Identities=20%  Similarity=0.177  Sum_probs=47.4

Q ss_pred             CCccccchHHHHHHHHHcCC---eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      .||||++|..|++.|.++.+   +++.+...... ...+.          ..+.+...-+...     +.+.  ++|+||
T Consensus         7 vGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a-G~~~~----------~~~~~~~~~~~~~-----~~~~--~~Dvvf   68 (344)
T 3tz6_A            7 VGATGQVGQVMRTLLDERDFPASAVRFFASARSQ-GRKLA----------FRGQEIEVEDAET-----ADPS--GLDIAL   68 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS-SCEEE----------ETTEEEEEEETTT-----SCCT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCceEEEEEECcccC-CCcee----------ecCCceEEEeCCH-----HHhc--cCCEEE
Confidence            49999999999999998854   45555433222 11110          0111222222221     2234  899999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~  107 (265)
                      .+.+.  .........+ +...++|-.|+..
T Consensus        69 ~a~~~--~~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           69 FSAGS--AMSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCh--HHHHHHHHHHHhCCCEEEECCCcc
Confidence            99874  2233344332 3334677777754

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=94.22  E-value=0.032  Score=45.49  Aligned_cols=89  Identities=18%  Similarity=0.138  Sum_probs=57.5

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      | +|.+|...++.+...|.+|+++++++++......          .-+... ..|..+.+.+.++..  ++|+||+++|
T Consensus       188 G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~----------~lGa~~-vi~~~~~~~~~~~~~--g~D~vid~~g  253 (357)
T 2cf5_A          188 G-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ----------DLGADD-YVIGSDQAKMSELAD--SLDYVIDTVP  253 (357)
T ss_dssp             C-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT----------TSCCSC-EEETTCHHHHHHSTT--TEEEEEECCC
T ss_pred             C-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH----------HcCCce-eeccccHHHHHHhcC--CCCEEEECCC
Confidence            6 4889999999888889999999998765211110          022221 134555555655544  8999999998


Q ss_pred             CCccchHHHHHhCCCCCcEEEEec
Q 024575           82 READEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        82 ~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .. ......++.++...+++.++.
T Consensus       254 ~~-~~~~~~~~~l~~~G~iv~~G~  276 (357)
T 2cf5_A          254 VH-HALEPYLSLLKLDGKLILMGV  276 (357)
T ss_dssp             SC-CCSHHHHTTEEEEEEEEECSC
T ss_pred             Ch-HHHHHHHHHhccCCEEEEeCC
Confidence            53 234556666664457777664

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=94.20  E-value=0.016  Score=47.37  Aligned_cols=87  Identities=21%  Similarity=0.267  Sum_probs=55.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCC---CccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~   75 (265)
                      +|+ |.+|..+++.+...|.+|+++++++   ++. +..        .  .-++..+  | .+  .+.+.+ .. .++|+
T Consensus       187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------~--~~ga~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVI--------E--ETKTNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHH--------H--HHTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHH--------H--HhCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence            488 9999999999988899999999986   331 111        1  1244444  4 43  233433 22 47999


Q ss_pred             EEEcCCCCccch-HHHHHhCCCCCcEEEEec
Q 024575           76 VYDINGREADEV-EPILDALPNLEQFIYCSS  105 (265)
Q Consensus        76 vi~~a~~~~~~~-~~l~~~~~~~~~~v~~Ss  105 (265)
                      ||+++|.. ... ...++.++...+++.++.
T Consensus       250 vid~~g~~-~~~~~~~~~~l~~~G~iv~~g~  279 (366)
T 2cdc_A          250 IIDATGAD-VNILGNVIPLLGRNGVLGLFGF  279 (366)
T ss_dssp             EEECCCCC-THHHHHHGGGEEEEEEEEECSC
T ss_pred             EEECCCCh-HHHHHHHHHHHhcCCEEEEEec
Confidence            99999853 233 455666664457777664

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=94.18  E-value=0.017  Score=46.48  Aligned_cols=90  Identities=19%  Similarity=0.180  Sum_probs=53.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH--HHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~d~vi~   78 (265)
                      +||+|.+|...++.+...|.+|+++++++.+. +..        .+  -+...+ .|..+.+  .+. .+...++|+||+
T Consensus       157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-~~~--------~~--lGa~~v-~~~~~~~~~~~~-~~~~~~~d~vid  223 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAA-DYL--------KQ--LGASEV-ISREDVYDGTLK-ALSKQQWQGAVD  223 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-HHH--------HH--HTCSEE-EEHHHHCSSCCC-SSCCCCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHH--------HH--cCCcEE-EECCCchHHHHH-HhhcCCccEEEE
Confidence            48899999999999888899999999986652 111        11  122221 2322211  111 112237999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++|.  ......++.++...+++.++.
T Consensus       224 ~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (330)
T 1tt7_A          224 PVGG--KQLASLLSKIQYGGSVAVSGL  248 (330)
T ss_dssp             SCCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred             CCcH--HHHHHHHHhhcCCCEEEEEec
Confidence            9985  234445555554457776653

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=94.15  E-value=0.024  Score=46.48  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=57.0

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+ |.+|...++.+...|.+|+++++++.+.. ..        .  .-++.. ..|..+.+.+.++..  ++|+||++++
T Consensus       202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~-~a--------~--~lGa~~-vi~~~~~~~~~~~~~--g~Dvvid~~g  266 (369)
T 1uuf_A          202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AA--------K--ALGADE-VVNSRNADEMAAHLK--SFDFILNTVA  266 (369)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HH--------H--HHTCSE-EEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------H--HcCCcE-EeccccHHHHHHhhc--CCCEEEECCC
Confidence            66 78999999988888999999998766521 11        1  123322 235555554554443  8999999988


Q ss_pred             CCccchHHHHHhCCCCCcEEEEec
Q 024575           82 READEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        82 ~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .. ......++.++...+++.++.
T Consensus       267 ~~-~~~~~~~~~l~~~G~iv~~G~  289 (369)
T 1uuf_A          267 AP-HNLDDFTTLLKRDGTMTLVGA  289 (369)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred             CH-HHHHHHHHHhccCCEEEEecc
Confidence            52 234556666664457776654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=94.09  E-value=0.011  Score=41.31  Aligned_cols=64  Identities=14%  Similarity=0.137  Sum_probs=42.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|.+|+.+++.|.+.|++|++.+|++++.. .+        .. .-+....     ..+++.+++.  ++|+||.+.+.
T Consensus        28 G~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~-~~--------a~-~~~~~~~-----~~~~~~~~~~--~~Divi~at~~   90 (144)
T 3oj0_A           28 GNGMLASEIAPYFSYPQYKVTVAGRNIDHVR-AF--------AE-KYEYEYV-----LINDIDSLIK--NNDVIITATSS   90 (144)
T ss_dssp             CCSHHHHHHGGGCCTTTCEEEEEESCHHHHH-HH--------HH-HHTCEEE-----ECSCHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCHHHHH-HH--------HH-HhCCceE-----eecCHHHHhc--CCCEEEEeCCC
Confidence            3599999999999999999999998866521 11        10 0122221     2233455667  89999999876


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.08  E-value=0.12  Score=42.41  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=47.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|+.+++.+.+.|++|++++.++......+             --..+..|+.|.+.+.++++  .+|+|..
T Consensus        19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~   79 (377)
T 3orq_A           19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY   79 (377)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence            4588999999999999999999988765432221             22466789999999999988  7888864

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=94.08  E-value=0.067  Score=43.67  Aligned_cols=87  Identities=18%  Similarity=0.235  Sum_probs=46.9

Q ss_pred             CCccccchHHHHH-HHHHcCC---eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSR-LLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~-~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.|++ .|.++.+   +++.++.+...  ..+...         .+......+..+.+.    +.  ++|+|
T Consensus         6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~~---------~~~~~~~~~~~~~~~----~~--~~Dvv   68 (370)
T 3pzr_A            6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPNF---------GKDAGMLHDAFDIES----LK--QLDAV   68 (370)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCCS---------SSCCCBCEETTCHHH----HT--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC--cCHHHh---------CCCceEEEecCChhH----hc--cCCEE
Confidence            4999999999999 6666663   66665543322  222110         111111123333332    35  99999


Q ss_pred             EEcCCCCccchHHHHHh-CC-CC-CcEEEEecc
Q 024575           77 YDINGREADEVEPILDA-LP-NL-EQFIYCSSA  106 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~-~~-~~-~~~v~~Ss~  106 (265)
                      |.+.+..  ........ ++ +. +++|=.|+.
T Consensus        69 f~a~~~~--~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           69 ITCQGGS--YTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             EECSCHH--HHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EECCChH--HHHHHHHHHHHCCCCEEEEeCCch
Confidence            9998742  23333333 23 55 356666653

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.02  E-value=0.076  Score=42.97  Aligned_cols=84  Identities=15%  Similarity=0.113  Sum_probs=57.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|++.....             ..++.+       .+++.+++.  +.|+|+.+...
T Consensus       180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~g~~~-------~~~l~ell~--~sDvV~l~~Pl  237 (345)
T 4g2n_A          180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-------------EEGAIY-------HDTLDSLLG--ASDIFLIAAPG  237 (345)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-------------HTTCEE-------CSSHHHHHH--TCSEEEECSCC
T ss_pred             EeChhHHHHHHHHHHCCCEEEEECCCCcchhh-------------hcCCeE-------eCCHHHHHh--hCCEEEEecCC
Confidence            56999999999999999999999987644110             012221       135667788  99999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++....||-+|...+
T Consensus       238 t~~T~~li~~~~l~~mk~gailIN~aRG~~  267 (345)
T 4g2n_A          238 RPELKGFLDHDRIAKIPEGAVVINISRGDL  267 (345)
T ss_dssp             CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence            422  1  2456777886667887776553

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=93.98  E-value=0.013  Score=47.26  Aligned_cols=94  Identities=14%  Similarity=0.129  Sum_probs=50.6

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCC--ccccCCCCCChhHHhhhhc--cceEEEecCCChHHHHHHhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKA--PIAQQLPGESDQEFAEFSS--KILHLKGDRKDYDFVKSSLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~d~   75 (265)
                      +||||++|+.+++.|.++ .+++..+..+..  .....+.+.    ...+.+  ...+...  .+.+   +++.  ++|+
T Consensus        10 vGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~----~p~~~~~~~~~v~~~--~~~~---~~~~--~~Dv   78 (337)
T 3dr3_A           10 VGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDL----HPQLKGIVELPLQPM--SDIS---EFSP--GVDV   78 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHH----CGGGTTTCCCBEEEE--SSGG---GTCT--TCSE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHh----CccccCccceeEecc--CCHH---HHhc--CCCE
Confidence            499999999999999986 568888865541  111111000    000001  1222111  0222   2224  8999


Q ss_pred             EEEcCCCCccchHHHHHh-CCCCCcEEEEecce
Q 024575           76 VYDINGREADEVEPILDA-LPNLEQFIYCSSAG  107 (265)
Q Consensus        76 vi~~a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~  107 (265)
                      ||.+.+.  .....+... ++...++|-+|+..
T Consensus        79 vf~a~p~--~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           79 VFLATAH--EVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             EEECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             EEECCCh--HHHHHHHHHHHHCCCEEEEcCCcc
Confidence            9988764  223444443 33445788888754

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=93.97  E-value=0.06  Score=37.70  Aligned_cols=76  Identities=9%  Similarity=-0.008  Sum_probs=45.1

Q ss_pred             Ccc---ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |++   |.+|..+++.|.+.||+|+...++....  .            ..++. +.-++      .++..  .+|+++-
T Consensus        20 Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~--~------------i~G~~-~~~sl------~el~~--~~Dlvii   76 (145)
T 2duw_A           20 GASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK--T------------LLGQQ-GYATL------ADVPE--KVDMVDV   76 (145)
T ss_dssp             SCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS--E------------ETTEE-CCSST------TTCSS--CCSEEEC
T ss_pred             CcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc--c------------cCCee-ccCCH------HHcCC--CCCEEEE
Confidence            666   7899999999999999977766554100  0            01221 11122      23333  7899998


Q ss_pred             cCCCCccchHHHHHhC-C-CCCcEEE
Q 024575           79 INGREADEVEPILDAL-P-NLEQFIY  102 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~-~-~~~~~v~  102 (265)
                      +..  ......+++.+ + +++.++.
T Consensus        77 ~vp--~~~v~~v~~~~~~~g~~~i~i  100 (145)
T 2duw_A           77 FRN--SEAAWGVAQEAIAIGAKTLWL  100 (145)
T ss_dssp             CSC--STHHHHHHHHHHHHTCCEEEC
T ss_pred             EeC--HHHHHHHHHHHHHcCCCEEEE
Confidence            865  35555555543 3 6655444

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=93.96  E-value=0.096  Score=42.20  Aligned_cols=80  Identities=19%  Similarity=0.195  Sum_probs=54.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++...                .++..       ..++.++++  +.|+|+.+...
T Consensus       171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~-------~~~l~ell~--~aDvVil~vP~  225 (333)
T 3ba1_A          171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY-------YGSVVELAS--NSDILVVACPL  225 (333)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE-------ESCHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee-------cCCHHHHHh--cCCEEEEecCC
Confidence            569999999999999999999999876541                12211       123456777  99999988765


Q ss_pred             Cc--cch--HHHHHhCCCCCcEEEEecce
Q 024575           83 EA--DEV--EPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~--~~~--~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +.  ...  ...+..++....+|.+|+..
T Consensus       226 ~~~t~~li~~~~l~~mk~gailIn~srG~  254 (333)
T 3ba1_A          226 TPETTHIINREVIDALGPKGVLINIGRGP  254 (333)
T ss_dssp             CGGGTTCBCHHHHHHHCTTCEEEECSCGG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence            42  122  34566677555666666543

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=93.95  E-value=0.23  Score=38.05  Aligned_cols=98  Identities=12%  Similarity=0.139  Sum_probs=56.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEE-EcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHh-hccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~~d~vi~   78 (265)
                      +|+ |.+|+.+++.+.+.+.++++. +|++.... ..+-  ...+.+.. +.. +..|++.++...+.+ .+.+..+|+.
T Consensus         9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~-gv~v--~~dl~~l~-~~D-VvIDft~p~a~~~~~~l~~g~~vVig   82 (243)
T 3qy9_A            9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKATT-PYQQ--YQHIADVK-GAD-VAIDFSNPNLLFPLLDEDFHLPLVVA   82 (243)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--C-CSCB--CSCTTTCT-TCS-EEEECSCHHHHHHHHTSCCCCCEEEC
T ss_pred             ECc-CHHHHHHHHHHHhCCCEEEEEEecCccccC-CCce--eCCHHHHh-CCC-EEEEeCChHHHHHHHHHhcCCceEeC
Confidence            377 999999999999986677764 45443210 0000  00001111 233 336788887765554 3347889998


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +.|++......+.++++. ..+++.+-
T Consensus        83 TTG~s~e~~~~l~~aa~~-~~v~~a~N  108 (243)
T 3qy9_A           83 TTGEKEKLLNKLDELSQN-MPVFFSAN  108 (243)
T ss_dssp             CCSSHHHHHHHHHHHTTT-SEEEECSS
T ss_pred             CCCCCHHHHHHHHHHHhc-CCEEEECC
Confidence            888765555566666664 34555543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=93.90  E-value=0.013  Score=47.87  Aligned_cols=90  Identities=12%  Similarity=0.061  Sum_probs=54.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (265)
                      +|+ |.+|...++.+...|.+|+++++++.+.. ..        .+  -+...+ .|..+. +...++.  .++|+||++
T Consensus       186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~--------~~--lGa~~v-~~~~~~~~~~~~~~--~~~D~vid~  250 (360)
T 1piw_A          186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DA--------MK--MGADHY-IATLEEGDWGEKYF--DTFDLIVVC  250 (360)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HH--------HH--HTCSEE-EEGGGTSCHHHHSC--SCEEEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HH--------HH--cCCCEE-EcCcCchHHHHHhh--cCCCEEEEC
Confidence            477 99999999988888999999998876621 11        11  223222 344444 3333333  389999999


Q ss_pred             CCCC-ccchHHHHHhCCCCCcEEEEec
Q 024575           80 NGRE-ADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        80 a~~~-~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++.. .......++.++...+++.++.
T Consensus       251 ~g~~~~~~~~~~~~~l~~~G~iv~~g~  277 (360)
T 1piw_A          251 ASSLTDIDFNIMPKAMKVGGRIVSISI  277 (360)
T ss_dssp             CSCSTTCCTTTGGGGEEEEEEEEECCC
T ss_pred             CCCCcHHHHHHHHHHhcCCCEEEEecC
Confidence            8851 1223344555554456776653

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.86  E-value=0.048  Score=42.11  Aligned_cols=61  Identities=10%  Similarity=0.085  Sum_probs=43.0

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|..|++++..|.+.|. +|++..|++++. +.+.+           .....     ..+++.+.+.  ++|+||++..
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka-~~la~-----------~~~~~-----~~~~~~~~~~--~aDiVInatp  175 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERA-KALDF-----------PVKIF-----SLDQLDEVVK--KAKSLFNTTS  175 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHH-HTCCS-----------SCEEE-----EGGGHHHHHH--TCSEEEECSS
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHH-----------HcccC-----CHHHHHhhhc--CCCEEEECCC
Confidence            459999999999999997 999999987663 23321           11111     2244566677  8999999875


Q ss_pred             C
Q 024575           82 R   82 (265)
Q Consensus        82 ~   82 (265)
                      .
T Consensus       176 ~  176 (253)
T 3u62_A          176 V  176 (253)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=93.85  E-value=0.038  Score=43.90  Aligned_cols=84  Identities=15%  Similarity=0.227  Sum_probs=55.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|++.+|++.+.. .+        .  ..++..+     +.+++.+++.  ++|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~-~~--------~--~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLA-RI--------T--EMGLVPF-----HTDELKEHVK--DIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------H--HTTCEEE-----EGGGHHHHST--TCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HH--------H--HCCCeEE-----chhhHHHHhh--CCCEEEECCCh
Confidence            4599999999999999999999999764411 00        0  1133322     1245677787  99999999876


Q ss_pred             CccchHHHHHhCCCCCcEEEEec
Q 024575           83 EADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ..-. ...++.++....+|-++.
T Consensus       226 ~~i~-~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          226 MILN-QTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CCBC-HHHHTTSCTTCEEEECSS
T ss_pred             hhhC-HHHHHhCCCCCEEEEEeC
Confidence            4332 335566665556666653

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=93.85  E-value=0.13  Score=42.67  Aligned_cols=92  Identities=15%  Similarity=0.106  Sum_probs=56.9

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~v   76 (265)
                      +|+ |.+|...++.+...|. +|+++++++.+. +..        .  .-++..+ .|..+.   +.+.++....++|+|
T Consensus       220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~--------~--~lGa~~v-i~~~~~~~~~~i~~~t~g~g~D~v  286 (404)
T 3ip1_A          220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRR-NLA--------K--ELGADHV-IDPTKENFVEAVLDYTNGLGAKLF  286 (404)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHH--------H--HHTCSEE-ECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHH--------H--HcCCCEE-EcCCCCCHHHHHHHHhCCCCCCEE
Confidence            366 9999999998888898 899888776552 111        1  1233322 244333   334444444479999


Q ss_pred             EEcCCCCccchHHHHHhC----CCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDAL----PNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~----~~~~~~v~~Ss  105 (265)
                      |+++|........+++++    +...+++.++.
T Consensus       287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            999986533334445555    75567887764

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=93.84  E-value=0.065  Score=43.42  Aligned_cols=92  Identities=14%  Similarity=0.175  Sum_probs=55.8

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~v   76 (265)
                      +||+|.+|..+++.+... |.+|+++++++.+.. ..        .+  .+.. ...|..+.+.   +.++....++|+|
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~-~~--------~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AA--------KR--AGAD-YVINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HH--------HH--HTCS-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HH--------HH--hCCC-EEecCCCccHHHHHHHHhcCCCceEE
Confidence            588889999999999999 999999998765421 11        11  1222 1235555433   3443321279999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |+++|.. ......++.++...+++.++.
T Consensus       245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  272 (347)
T 1jvb_A          245 IDLNNSE-KTLSVYPKALAKQGKYVMVGL  272 (347)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECCS
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEECC
Confidence            9999842 122333444453446776653

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=93.76  E-value=0.025  Score=46.06  Aligned_cols=96  Identities=11%  Similarity=0.107  Sum_probs=49.1

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccc---cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.|++.|.++. .++..+..+...-.   +.++......+........+...   +.+    .+.  ++|+|
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~--~vDvv   83 (359)
T 4dpl_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMD--DVDII   83 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCT--TCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----Hhc--CCCEE
Confidence            5999999999999888775 57776654333210   00100000000000011111111   222    234  89999


Q ss_pred             EEcCCCCccchHHHHHh-CCCCCcEEEEecce
Q 024575           77 YDINGREADEVEPILDA-LPNLEQFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~  107 (265)
                      |.+.+...  ...+... ++...++|-+|+..
T Consensus        84 f~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpl_A           84 FSPLPQGA--AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             EECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence            99987543  3344443 33445778788754

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=93.76  E-value=0.025  Score=46.06  Aligned_cols=96  Identities=11%  Similarity=0.107  Sum_probs=49.1

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccc---cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.|++.|.++. .++..+..+...-.   +.++......+........+...   +.+    .+.  ++|+|
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~--~vDvv   83 (359)
T 4dpk_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMD--DVDII   83 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCT--TCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----Hhc--CCCEE
Confidence            5999999999999888775 57776654333210   00100000000000011111111   222    234  89999


Q ss_pred             EEcCCCCccchHHHHHh-CCCCCcEEEEecce
Q 024575           77 YDINGREADEVEPILDA-LPNLEQFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~-~~~~~~~v~~Ss~~  107 (265)
                      |.+.+...  ...+... ++...++|-+|+..
T Consensus        84 f~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpk_A           84 FSPLPQGA--AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             EECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence            99987543  3344443 33445778788754

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=93.73  E-value=0.11  Score=38.72  Aligned_cols=27  Identities=22%  Similarity=0.373  Sum_probs=24.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~   29 (265)
                      |.|.+|+.++..|.+.|++|++.+|++
T Consensus        26 G~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           26 GKGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            479999999999999999999988763

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=93.69  E-value=0.23  Score=40.36  Aligned_cols=94  Identities=12%  Similarity=0.083  Sum_probs=58.0

Q ss_pred             CCccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHH----HhhccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS----SLSAKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----~~~~~~~d~   75 (265)
                      +|+ |.+|...++.+...|.+ |+++++++.+. +.        ..++...+..+..|-.+.+++.+    .....++|+
T Consensus       186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~--------a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRL-KF--------AKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH-HH--------HHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HH--------HHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            366 99999999988888986 88888876552 11        11111222223334333344333    333347999


Q ss_pred             EEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           76 VYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        76 vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ||++.|. .......++.++...+++.++.
T Consensus       256 vid~~g~-~~~~~~~~~~l~~~G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGV-ESSIAAAIWAVKFGGKVFVIGV  284 (363)
T ss_dssp             EEECSCC-HHHHHHHHHHSCTTCEEEECCC
T ss_pred             EEECCCC-hHHHHHHHHHhcCCCEEEEEcc
Confidence            9999884 2245567778886668887763

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=93.66  E-value=0.061  Score=43.51  Aligned_cols=89  Identities=13%  Similarity=0.094  Sum_probs=56.4

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~v   76 (265)
                      +|+ |.+|..+++.+...|. +|+++++++.+. +...+          - .. ...|..+.+   .+.++. ..++|+|
T Consensus       171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~----------l-a~-~v~~~~~~~~~~~~~~~~-~~g~D~v  235 (343)
T 2dq4_A          171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARP----------Y-AD-RLVNPLEEDLLEVVRRVT-GSGVEVL  235 (343)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTT----------T-CS-EEECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----------h-HH-hccCcCccCHHHHHHHhc-CCCCCEE
Confidence            478 9999999998888898 999999876552 11111          1 11 123444322   233332 3479999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |+++|. .......++.++...+++.++.
T Consensus       236 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGN-EAAIHQGLMALIPGGEARILGI  263 (343)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence            999874 2345566777774457777664

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=93.62  E-value=0.026  Score=45.58  Aligned_cols=87  Identities=11%  Similarity=0.001  Sum_probs=48.6

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      .||||++|+.+++.|.+++   .+++++....+. ...+.          ..+..+...|. +++    .+.  ++|+||
T Consensus         9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~----------~~~~~i~~~~~-~~~----~~~--~vDvVf   70 (336)
T 2r00_A            9 FGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR----------FNGKTVRVQNV-EEF----DWS--QVHIAL   70 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee----------ecCceeEEecC-ChH----Hhc--CCCEEE
Confidence            3899999999999999873   577777632211 00000          01112111222 121    234  899999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss~~  107 (265)
                      .+.+..  ........+ +...++|-.|+..
T Consensus        71 ~a~g~~--~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           71 FSAGGE--LSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ECSCHH--HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCch--HHHHHHHHHHHcCCEEEEcCCcc
Confidence            998753  233444443 3334678788754

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=93.62  E-value=0.02  Score=45.79  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=24.7

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK   29 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~   29 (265)
                      |.|.+|..++..|.+.|+ +|++.+|++
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            579999999999999999 999999974

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=93.61  E-value=0.15  Score=42.36  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=47.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|+.+++.+.+.|++|++++ .+......+.           .....+.+|+.|.+.+.++++  .+|+|+.
T Consensus        31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~   92 (403)
T 3k5i_A           31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA   92 (403)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence            358999999999999999999999 6544332222           222457789999999999998  7888774

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=93.60  E-value=0.062  Score=43.54  Aligned_cols=89  Identities=18%  Similarity=0.253  Sum_probs=50.6

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC--ChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~d~vi   77 (265)
                      .||||++|+.|++.|.++. .+++.+.-..+. ...+        .+..+.+.   .|+.  +.+ ..+++.  ++|+||
T Consensus        19 vGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~~--------~~~~p~~~---~~l~~~~~~-~~~~~~--~~Dvvf   83 (351)
T 1vkn_A           19 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKL--------EEIFPSTL---ENSILSEFD-PEKVSK--NCDVLF   83 (351)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBH--------HHHCGGGC---CCCBCBCCC-HHHHHH--HCSEEE
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCCh--------HHhChhhc---cCceEEeCC-HHHhhc--CCCEEE
Confidence            4999999999999999985 477776543222 1111        11111111   2221  111 122335  899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      .+.+.  .....+...+ ...++|=.|+..
T Consensus        84 ~alp~--~~s~~~~~~~-~g~~VIDlSsdf  110 (351)
T 1vkn_A           84 TALPA--GASYDLVREL-KGVKIIDLGADF  110 (351)
T ss_dssp             ECCST--THHHHHHTTC-CSCEEEESSSTT
T ss_pred             ECCCc--HHHHHHHHHh-CCCEEEECChhh
Confidence            98764  3344555555 445677777653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=93.59  E-value=0.037  Score=43.51  Aligned_cols=71  Identities=13%  Similarity=0.110  Sum_probs=45.2

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +|+ |.+|++++..|.+.|. +|++..|+.++.. .+.    ..+......+.+...++   +++.+.+.  ++|+||++
T Consensus       133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~-~la----~~~~~~~~~~~i~~~~~---~~l~~~l~--~~DiVIna  201 (283)
T 3jyo_A          133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQ-ALA----DVINNAVGREAVVGVDA---RGIEDVIA--AADGVVNA  201 (283)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHH-HHH----HHHHHHHTSCCEEEECS---TTHHHHHH--HSSEEEEC
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHH-HHH----HHHHhhcCCceEEEcCH---HHHHHHHh--cCCEEEEC
Confidence            355 8999999999999997 7999999876521 111    01111112233334443   34556677  89999999


Q ss_pred             CCC
Q 024575           80 NGR   82 (265)
Q Consensus        80 a~~   82 (265)
                      .+.
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            764

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.59  E-value=0.12  Score=42.58  Aligned_cols=90  Identities=17%  Similarity=0.089  Sum_probs=55.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC----------------------C
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D   60 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----------------------~   60 (265)
                      |.|-+|..+++.+...|.+|++.+|++.... ..        .  .-+..++..|..                      .
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~-~~--------~--~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          179 GVGVAGLQAIATAKRLGAVVMATDVRAATKE-QV--------E--SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHH-HH--------H--HTTCEECCC-----------------------CCH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------H--HcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            3599999999999999999999998876521 10        0  012222211111                      1


Q ss_pred             hHHHHHHhhccCccEEEEcC---CCCcc--chHHHHHhCCCCCcEEEEec
Q 024575           61 YDFVKSSLSAKGFDVVYDIN---GREAD--EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a---~~~~~--~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .+.+.+.+.  +.|+||+++   +....  -....++.++....+|.++.
T Consensus       248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence            233667777  899999998   42221  13566777775556776663

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=93.59  E-value=0.18  Score=40.68  Aligned_cols=81  Identities=14%  Similarity=0.018  Sum_probs=56.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|+....   ..           ..+.     ..   ++.+++.  +.|+|+.+...
T Consensus       152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~P~  207 (333)
T 1dxy_A          152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFD-----YV---SLEDLFK--QSDVIDLHVPG  207 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hccc-----cC---CHHHHHh--cCCEEEEcCCC
Confidence            569999999999999999999999887652   11           1111     11   3556777  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..  +  ....+..++....+|-+|+..
T Consensus       208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~  236 (333)
T 1dxy_A          208 IEQNTHIINEAAFNLMKPGAIVINTARPN  236 (333)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCTT
T ss_pred             chhHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence            432  1  145677788666788887644

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=93.52  E-value=0.13  Score=35.88  Aligned_cols=76  Identities=11%  Similarity=0.015  Sum_probs=44.7

Q ss_pred             CCcc---ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +|++   |.+|..+++.|.+.||+|+....+  . . .+            .++.       -..++.++..  .+|.++
T Consensus        28 VGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~--~-~-~i------------~G~~-------~y~sl~~l~~--~vDlvv   82 (144)
T 2d59_A           28 VGASPKPERDANIVMKYLLEHGYDVYPVNPK--Y-E-EV------------LGRK-------CYPSVLDIPD--KIEVVD   82 (144)
T ss_dssp             ETCCSCTTSHHHHHHHHHHHTTCEEEEECTT--C-S-EE------------TTEE-------CBSSGGGCSS--CCSEEE
T ss_pred             EccCCCCCchHHHHHHHHHHCCCEEEEECCC--C-C-eE------------CCee-------ccCCHHHcCC--CCCEEE
Confidence            3676   789999999999999986655332  2 0 00            1221       1122223333  789988


Q ss_pred             EcCCCCccchHHHHHhCC--CCCcEEEE
Q 024575           78 DINGREADEVEPILDALP--NLEQFIYC  103 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~--~~~~~v~~  103 (265)
                      -+...  .....+++.|.  +++.+++.
T Consensus        83 i~vp~--~~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           83 LFVKP--KLTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             ECSCH--HHHHHHHHHHHHHTCSEEEEC
T ss_pred             EEeCH--HHHHHHHHHHHHcCCCEEEEC
Confidence            87543  55556665543  66655543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.51  E-value=0.098  Score=42.11  Aligned_cols=84  Identities=15%  Similarity=0.109  Sum_probs=54.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|+...... ..          ..++..     .   ++.+++.  ++|+|+.+...
T Consensus       162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~----------~~g~~~-----~---~l~e~l~--~aDvVi~~vp~  220 (330)
T 2gcg_A          162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEE-AA----------EFQAEF-----V---STPELAA--QSDFIVVACSL  220 (330)
T ss_dssp             CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHH-HH----------TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcchhH-HH----------hcCcee-----C---CHHHHHh--hCCEEEEeCCC
Confidence            46999999999999999999999987654211 00          012221     1   3456677  89999988765


Q ss_pred             Cc--cch--HHHHHhCCCCCcEEEEecce
Q 024575           83 EA--DEV--EPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~--~~~--~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +.  .+.  ..++..++....+|.+|+..
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~srg~  249 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISRGD  249 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCCc
Confidence            42  222  35667777555677666543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=93.50  E-value=0.11  Score=42.41  Aligned_cols=89  Identities=13%  Similarity=0.125  Sum_probs=55.2

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+.. .|.+|+++++++.+. +.+        .  .-+...+ .|..+  .+.+.+. ...++|+||
T Consensus       178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~--------~--~lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvi  244 (363)
T 4dvj_A          178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWV--------K--SLGAHHV-IDHSKPLAAEVAAL-GLGAPAFVF  244 (363)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHH--------H--HTTCSEE-ECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHH--------H--HcCCCEE-EeCCCCHHHHHHHh-cCCCceEEE
Confidence            47899999999887776 589999999876552 111        1  1233322 23332  1223332 334799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEE
Q 024575           78 DINGREADEVEPILDALPNLEQFIYC  103 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~  103 (265)
                      +++|.. ......++.++...+++.+
T Consensus       245 d~~g~~-~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          245 STTHTD-KHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ECSCHH-HHHHHHHHHSCTTCEEEEC
T ss_pred             ECCCch-hhHHHHHHHhcCCCEEEEE
Confidence            998732 2345667778855677766

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.49  E-value=0.074  Score=43.16  Aligned_cols=86  Identities=13%  Similarity=0.060  Sum_probs=58.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|++..... .        .  ..++..       .+++.++++  ++|+|+.+...
T Consensus       171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~--------~--~~g~~~-------~~~l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL-E--------K--ETGAKF-------VEDLNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH-H--------H--HHCCEE-------CSCHHHHGG--GCSEEEECSCC
T ss_pred             EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH-H--------H--hCCCeE-------cCCHHHHHh--cCCEEEECCCC
Confidence            56899999999999999999999987643110 0        0  112221       134667888  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++....+|.+|...+
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~~  260 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI  260 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence            322  1  2466777886677888776543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=93.29  E-value=0.049  Score=42.81  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.++..|++.|++|++.+|+++.
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            46999999999999999999999998765

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=93.27  E-value=0.15  Score=40.33  Aligned_cols=29  Identities=14%  Similarity=0.133  Sum_probs=27.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..++..|.+.|++|++.+|++++
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   50 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEA   50 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57999999999999999999999998876

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=93.22  E-value=0.15  Score=40.77  Aligned_cols=83  Identities=14%  Similarity=0.013  Sum_probs=56.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++.+..  ..          ..++..  .      ++.+++.  +.|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~----------~~g~~~--~------~l~ell~--~aDvVvl~~P~  206 (313)
T 2ekl_A          149 GFGRIGTKVGIIANAMGMKVLAYDILDIREK--AE----------KINAKA--V------SLEELLK--NSDVISLHVTV  206 (313)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH----------HTTCEE--C------CHHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCCcchhH--HH----------hcCcee--c------CHHHHHh--hCCEEEEeccC
Confidence            5699999999999999999999998765420  00          123331  1      3456777  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..  +  ....+..++....+|-+|+..
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg~  235 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRAV  235 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCGG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCCc
Confidence            332  1  145667788666777777644

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=93.19  E-value=0.52  Score=38.47  Aligned_cols=90  Identities=9%  Similarity=0.033  Sum_probs=55.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++. ++.+ .+..        .  .-++.. ..|..+.+   .+.++.. .++|+||
T Consensus       171 ~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~-~~~~--------~--~lGa~~-vi~~~~~~~~~~v~~~t~-g~~d~v~  236 (371)
T 3gqv_A          171 YGGSTATATVTMQMLRLSGYIPIATC-SPHN-FDLA--------K--SRGAEE-VFDYRAPNLAQTIRTYTK-NNLRYAL  236 (371)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HHHH--------H--HTTCSE-EEETTSTTHHHHHHHHTT-TCCCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH-HHHH--------H--HcCCcE-EEECCCchHHHHHHHHcc-CCccEEE
Confidence            38889999999999988999999886 3333 1111        1  123322 23444433   3333333 3599999


Q ss_pred             EcCCCCccchHHHHHhC-CCCCcEEEEec
Q 024575           78 DINGREADEVEPILDAL-PNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~-~~~~~~v~~Ss  105 (265)
                      ++.|. .......++.+ +...+++.++.
T Consensus       237 d~~g~-~~~~~~~~~~l~~~~G~iv~~g~  264 (371)
T 3gqv_A          237 DCITN-VESTTFCFAAIGRAGGHYVSLNP  264 (371)
T ss_dssp             ESSCS-HHHHHHHHHHSCTTCEEEEESSC
T ss_pred             ECCCc-hHHHHHHHHHhhcCCCEEEEEec
Confidence            99884 23345566777 45568887764

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=93.15  E-value=0.16  Score=41.64  Aligned_cols=91  Identities=11%  Similarity=0.101  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC--ChHH----HHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDF----VKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~----~~~~~~~~~~   73 (265)
                      +| +|.+|...++.+...| .+|+++++++.+.. .+        .  .-++..+ .|..  +.++    +.++....++
T Consensus       202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~--------~--~lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          202 QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK-LA--------E--EIGADLT-LNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HH--------H--HTTCSEE-EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH-HH--------H--HcCCcEE-EeccccCcchHHHHHHHHhCCCCC
Confidence            36 7999999999888889 69999998765521 11        1  1233221 2433  1223    3333332379


Q ss_pred             cEEEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |+||+++|.. ......++.++...+++.++.
T Consensus       269 Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~G~  299 (380)
T 1vj0_A          269 DFILEATGDS-RALLEGSELLRRGGFYSVAGV  299 (380)
T ss_dssp             EEEEECSSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred             cEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999998842 345566777774457777664

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=93.15  E-value=0.22  Score=40.07  Aligned_cols=82  Identities=11%  Similarity=0.050  Sum_probs=55.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|+....   ..           ..+.     .   .++.+++.  +.|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~---~~l~ell~--~aDvV~~~~p~  208 (331)
T 1xdw_A          153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----Q---VSLDEVLE--KSDIITIHAPY  208 (331)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----E---CCHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----c---CCHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999876552   11           1111     1   13556777  89999987665


Q ss_pred             Cc--cc--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~--~~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +.  .+  ....+..++....+|-+|...+
T Consensus       209 t~~t~~li~~~~l~~mk~ga~lin~srg~~  238 (331)
T 1xdw_A          209 IKENGAVVTRDFLKKMKDGAILVNCARGQL  238 (331)
T ss_dssp             CTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence            32  12  1456777876667787776443

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=93.14  E-value=0.084  Score=43.05  Aligned_cols=95  Identities=13%  Similarity=0.126  Sum_probs=56.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---h---HHHHHHh--hccC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---Y---DFVKSSL--SAKG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~--~~~~   72 (265)
                      +||+|.+|...++.+...|.+|++++++.++..+..     ..+.  .-++..+ .|..+   .   +.+.++.  ...+
T Consensus       174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----~~~~--~lGa~~v-i~~~~~~~~~~~~~i~~~t~~~~~g  245 (364)
T 1gu7_A          174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLK--ELGATQV-ITEDQNNSREFGPTIKEWIKQSGGE  245 (364)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHH--HHTCSEE-EEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHH-----HHHH--hcCCeEE-EecCccchHHHHHHHHHHhhccCCC
Confidence            588999999999888888999999987665400000     0001  1233221 22222   1   2333333  2347


Q ss_pred             ccEEEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +|+||++.|..  .....++.++...+++.++.
T Consensus       246 ~Dvvid~~G~~--~~~~~~~~l~~~G~~v~~g~  276 (364)
T 1gu7_A          246 AKLALNCVGGK--SSTGIARKLNNNGLMLTYGG  276 (364)
T ss_dssp             EEEEEESSCHH--HHHHHHHTSCTTCEEEECCC
T ss_pred             ceEEEECCCch--hHHHHHHHhccCCEEEEecC
Confidence            99999998852  23355677775567887663

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=93.12  E-value=0.0061  Score=49.36  Aligned_cols=72  Identities=11%  Similarity=0.060  Sum_probs=42.9

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|++|++|+.++..|+..|  .+|++++++..+.....     ..+.   ... +-..++.-..+..+.++  ++|+||.
T Consensus        14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a-----~DL~---~~~-~~~~~i~~t~d~~~al~--dADvVvi   82 (343)
T 3fi9_A           14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVA-----EEIR---HCG-FEGLNLTFTSDIKEALT--DAKYIVS   82 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHH-----HHHH---HHC-CTTCCCEEESCHHHHHT--TEEEEEE
T ss_pred             ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHH-----Hhhh---hCc-CCCCceEEcCCHHHHhC--CCCEEEE
Confidence            4788999999999999988  58999998754321000     0000   000 00011111233456677  9999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      ++|..
T Consensus        83 taG~p   87 (343)
T 3fi9_A           83 SGGAP   87 (343)
T ss_dssp             CCC--
T ss_pred             ccCCC
Confidence            99863

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=93.06  E-value=0.51  Score=38.77  Aligned_cols=61  Identities=15%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|+.+++.+.+.|++|++++.++......+             --..+..|+.|.+.+.++++  .+|+|..
T Consensus        21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvI~~   81 (389)
T 3q2o_A           21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------------ADIEIVASYDDLKAIQHLAE--ISDVVTY   81 (389)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------------CSEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------------CCceEecCcCCHHHHHHHHH--hCCEeee
Confidence            4578999999999999999999987765422222             12345678889999999998  7898854

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=93.06  E-value=0.1  Score=42.76  Aligned_cols=90  Identities=11%  Similarity=0.047  Sum_probs=59.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecC------------------CChHHH
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV   64 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------~~~~~~   64 (265)
                      |.|-+|..+++.|...|.+|++++|++.... .+        .  .-+..++..|.                  ...+.+
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~-~~--------~--~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAE-QV--------R--SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHH-HH--------H--HTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------H--HcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            4599999999999999999999999876521 11        1  12333333221                  123467


Q ss_pred             HHHhhccCccEEEEcCCCCc-----cchHHHHHhCCCCCcEEEEec
Q 024575           65 KSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~-----~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .+.+.  +.|+||.++....     .-....++.++...-+|-++.
T Consensus       260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            77888  9999998863321     135678888886566776664

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=93.06  E-value=0.019  Score=46.09  Aligned_cols=27  Identities=7%  Similarity=-0.068  Sum_probs=25.3

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~   29 (265)
                      |.|.+|..++..|.+.| ++|++.+|++
T Consensus        31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           31 GFGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            57999999999999999 9999999986

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=93.05  E-value=0.049  Score=45.09  Aligned_cols=90  Identities=16%  Similarity=0.088  Sum_probs=57.1

Q ss_pred             CccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh----HHHHHHhhccCccEE
Q 024575            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~d~v   76 (265)
                      |+ |.+|...++.+...|. +|+++++++.+. +...          .-++..  .|..+.    +.+.++....++|+|
T Consensus       193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----------~lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERL-KLLS----------DAGFET--IDLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHH----------TTTCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH----------HcCCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence            65 9999999988887898 999999876652 1111          134443  354432    334444443379999


Q ss_pred             EEcCCCCc-------------cchHHHHHhCCCCCcEEEEec
Q 024575           77 YDINGREA-------------DEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~-------------~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |++++...             ......++.++...+++.++.
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~  300 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI  300 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence            99998642             135566777774456776553

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=93.03  E-value=0.2  Score=39.84  Aligned_cols=83  Identities=16%  Similarity=0.041  Sum_probs=56.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|++|++.+|++.+. . ..          ..++..     .   ++.+++.  +.|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~----------~~g~~~-----~---~l~ell~--~aDvV~l~~p~  206 (307)
T 1wwk_A          149 GFGRIGYQVAKIANALGMNILLYDPYPNEE-R-AK----------EVNGKF-----V---DLETLLK--ESDVVTIHVPL  206 (307)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHH-H-HH----------HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCChh-h-Hh----------hcCccc-----c---CHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999876541 0 00          123321     1   3556777  89999988765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..  +  ....+..++....+|-+|+..
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~  235 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGP  235 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCc
Confidence            432  1  135667788666788787644

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=92.93  E-value=0.48  Score=38.46  Aligned_cols=100  Identities=13%  Similarity=0.117  Sum_probs=61.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCC--------------CChhHHhhhhcc--ceEEEecCCChHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~~D~~~~~~~~   65 (265)
                      |.|.+|+.++..|+..|. ++++++++.-+....-..              .....+..+.+.  ++.+..++++...+.
T Consensus       125 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~  204 (353)
T 3h5n_A          125 GCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLH  204 (353)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGG
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhh
Confidence            458899999999999994 888888876442111111              011223333444  445556666555455


Q ss_pred             HHhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecc
Q 024575           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSA  106 (265)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~  106 (265)
                      + +.  ++|+||++.. +...++.++ ++|. ..+.+|+.+..
T Consensus       205 ~-~~--~~DlVvd~~D-n~~~~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          205 K-VP--EADIWVVSAD-HPFNLINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             G-SC--CCSEEEECCC-CSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             H-hc--cCCEEEEecC-ChHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            5 76  9999999763 344355554 4565 55778876543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=92.91  E-value=0.012  Score=47.18  Aligned_cols=87  Identities=15%  Similarity=0.143  Sum_probs=55.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|...++.+...|.+|+++.+...  .+.        ..  .-++.. ..|..+.+.+.+.+.  ++|+||++.
T Consensus       159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~~--------~~--~lGa~~-~i~~~~~~~~~~~~~--g~D~v~d~~  223 (321)
T 3tqh_A          159 HAGAGGVGHLAIQLAKQKGTTVITTASKRN--HAF--------LK--ALGAEQ-CINYHEEDFLLAIST--PVDAVIDLV  223 (321)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HHH--------HH--HHTCSE-EEETTTSCHHHHCCS--CEEEEEESS
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeccch--HHH--------HH--HcCCCE-EEeCCCcchhhhhcc--CCCEEEECC
Confidence            488999999999999989999998875322  111        11  123332 235555554556665  899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEe
Q 024575           81 GREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      |..  .....++.++...+++.++
T Consensus       224 g~~--~~~~~~~~l~~~G~iv~~g  245 (321)
T 3tqh_A          224 GGD--VGIQSIDCLKETGCIVSVP  245 (321)
T ss_dssp             CHH--HHHHHGGGEEEEEEEEECC
T ss_pred             CcH--HHHHHHHhccCCCEEEEeC
Confidence            842  2345555566445666554

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=92.88  E-value=0.029  Score=44.51  Aligned_cols=67  Identities=10%  Similarity=0.051  Sum_probs=43.5

Q ss_pred             CccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |+ |.+|++++..|.+.|. +|++..|+.++.. .+.+       .+.....    +..+.+++.+.+.  ++|+||++.
T Consensus       148 Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~-~la~-------~~~~~~~----~~~~~~~~~~~~~--~aDivIn~t  212 (297)
T 2egg_A          148 GA-GGGARGIYFSLLSTAAERIDMANRTVEKAE-RLVR-------EGDERRS----AYFSLAEAETRLA--EYDIIINTT  212 (297)
T ss_dssp             CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHH-HHHH-------HSCSSSC----CEECHHHHHHTGG--GCSEEEECS
T ss_pred             Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHH-------HhhhccC----ceeeHHHHHhhhc--cCCEEEECC
Confidence            54 8899999999999997 9999999865521 1100       0001000    1123345666777  899999998


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      +..
T Consensus       213 ~~~  215 (297)
T 2egg_A          213 SVG  215 (297)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=92.86  E-value=0.2  Score=45.49  Aligned_cols=89  Identities=17%  Similarity=0.153  Sum_probs=57.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      .||+|.+|...++.+...|.+|+++++.+ + ...+. .         +.-.+  .|..+.+   .+.+.....++|+||
T Consensus       352 ~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k-~~~l~-l---------ga~~v--~~~~~~~~~~~i~~~t~g~GvDvVl  417 (795)
T 3slk_A          352 HSAAGGVGMAAIQLARHLGAEVYATASED-K-WQAVE-L---------SREHL--ASSRTCDFEQQFLGATGGRGVDVVL  417 (795)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCCEEEECCGG-G-GGGSC-S---------CGGGE--ECSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred             ecCCCHHHHHHHHHHHHcCCEEEEEeChH-H-hhhhh-c---------Chhhe--eecCChhHHHHHHHHcCCCCeEEEE
Confidence            38899999999998888899999988654 3 11111 0         11111  2333332   333333345899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++.+.  ......++.++...+||.++.
T Consensus       418 d~~gg--~~~~~~l~~l~~~Gr~v~iG~  443 (795)
T 3slk_A          418 NSLAG--EFADASLRMLPRGGRFLELGK  443 (795)
T ss_dssp             ECCCT--TTTHHHHTSCTTCEEEEECCS
T ss_pred             ECCCc--HHHHHHHHHhcCCCEEEEecc
Confidence            98764  445666777776678888764

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=92.74  E-value=0.033  Score=47.23  Aligned_cols=29  Identities=14%  Similarity=0.253  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHc--CCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKE--GHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~--g~~V~~l~r~~~~   31 (265)
                      |+|++|..++..|.+.  |++|++++|++++
T Consensus        12 G~G~mG~~lA~~La~~g~G~~V~~~d~~~~~   42 (467)
T 2q3e_A           12 GAGYVGGPTCSVIAHMCPEIRVTVVDVNESR   42 (467)
T ss_dssp             CCSTTHHHHHHHHHHHCTTSEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence            5799999999999999  8999999998765

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=92.71  E-value=0.19  Score=41.47  Aligned_cols=90  Identities=14%  Similarity=0.060  Sum_probs=59.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEec----------------CCC------
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD----------------RKD------   60 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~~------   60 (265)
                      |.|-+|...++.|...|.+|+++++++.... ..        .  .-+..++..+                +++      
T Consensus       197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~-~~--------~--~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          197 GAGVAGLQAIATARRLGAVVSATDVRPAAKE-QV--------A--SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSTTHHH-HH--------H--HTTCEECCCCC-----------------CHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HH--------H--HcCCceeecccccccccccccchhhhcchhhhhhh
Confidence            4599999999999999999999999887521 11        0  0123332221                222      


Q ss_pred             hHHHHHHhhccCccEEEEcCCCCc-----cchHHHHHhCCCCCcEEEEec
Q 024575           61 YDFVKSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a~~~~-----~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .+.+.+.+.  +.|+||.++....     .-....++.++...-+|-+|.
T Consensus       266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            246788888  9999999864321     135678888886566777764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=92.64  E-value=0.063  Score=42.43  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=25.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.++..|.+.|++|++.+|++..
T Consensus        12 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~   40 (299)
T 1vpd_A           12 GLGIMGKPMSKNLLKAGYSLVVSDRNPEA   40 (299)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            47999999999999999999999887654

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=92.63  E-value=0.11  Score=36.05  Aligned_cols=26  Identities=19%  Similarity=0.326  Sum_probs=21.4

Q ss_pred             CCcc---ccchHHHHHHHHHcCCeEEEEE
Q 024575            1 MGGT---RFIGVFLSRLLVKEGHQVTLFT   26 (265)
Q Consensus         1 tGat---G~iG~~l~~~L~~~g~~V~~l~   26 (265)
                      +|+|   |.+|..+++.|.+.||+|+...
T Consensus        19 vGas~~~g~~G~~~~~~l~~~G~~v~~vn   47 (140)
T 1iuk_A           19 LGAHKDPSRPAHYVPRYLREQGYRVLPVN   47 (140)
T ss_dssp             ETCCSSTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             ECCCCCCCChHHHHHHHHHHCCCEEEEeC
Confidence            3777   7899999999999999866644

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=92.57  E-value=0.56  Score=38.36  Aligned_cols=90  Identities=10%  Similarity=0.112  Sum_probs=57.8

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-----hHHHHHHhhccCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~~~~~~~~d   74 (265)
                      +|+ |.+|...++.+...|. +|+++++++.+.. ...          .-++.. ..|..+     .+.+.++... ++|
T Consensus       200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a~----------~lGa~~-vi~~~~~~~~~~~~i~~~~~g-g~D  265 (378)
T 3uko_A          200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TAK----------KFGVNE-FVNPKDHDKPIQEVIVDLTDG-GVD  265 (378)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HHH----------TTTCCE-EECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHH----------HcCCcE-EEccccCchhHHHHHHHhcCC-CCC
Confidence            366 8999999998888898 8999988877621 111          123322 234331     2334444443 899


Q ss_pred             EEEEcCCCCccchHHHHHhCCC-CCcEEEEec
Q 024575           75 VVYDINGREADEVEPILDALPN-LEQFIYCSS  105 (265)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~~~~~-~~~~v~~Ss  105 (265)
                      +||+++|. .......++.++. ..+++.++.
T Consensus       266 ~vid~~g~-~~~~~~~~~~l~~g~G~iv~~G~  296 (378)
T 3uko_A          266 YSFECIGN-VSVMRAALECCHKGWGTSVIVGV  296 (378)
T ss_dssp             EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhccCCEEEEEcc
Confidence            99999884 2345566777775 378887764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=92.54  E-value=0.048  Score=43.47  Aligned_cols=73  Identities=16%  Similarity=0.175  Sum_probs=46.1

Q ss_pred             CccccchHHHHHHHHHcCC-eEEEEEcCCCcc--ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |+ |..|++++..|.+.|. +|++..|+++..  .+.+.    .++.. ..+..+...++.+.+.+.+.+.  ++|+||+
T Consensus       155 GA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la----~~~~~-~~~~~v~~~~~~~l~~~~~~l~--~~DiIIN  226 (312)
T 3t4e_A          155 GA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA----KRVNE-NTDCVVTVTDLADQHAFTEALA--SADILTN  226 (312)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--HCSEEEE
T ss_pred             Cc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH----HHhhh-ccCcceEEechHhhhhhHhhcc--CceEEEE
Confidence            54 8999999999999997 899999984321  11110    00110 1233344456656544566677  8999999


Q ss_pred             cCCC
Q 024575           79 INGR   82 (265)
Q Consensus        79 ~a~~   82 (265)
                      +.+.
T Consensus       227 aTp~  230 (312)
T 3t4e_A          227 GTKV  230 (312)
T ss_dssp             CSST
T ss_pred             CCcC
Confidence            8764

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=92.53  E-value=0.088  Score=42.58  Aligned_cols=91  Identities=14%  Similarity=0.114  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vi   77 (265)
                      +|+ |.+|...++.+...  |.+|+++++++++. +..        .  .-+...+ .|..+ .+.+.++-...++|+||
T Consensus       177 ~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~--------~--~lGa~~v-i~~~~~~~~~~~~~~g~g~D~vi  243 (344)
T 2h6e_A          177 NGI-GGLAVYTIQILKALMKNITIVGISRSKKHR-DFA--------L--ELGADYV-SEMKDAESLINKLTDGLGASIAI  243 (344)
T ss_dssp             ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHH--------H--HHTCSEE-ECHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHH--------H--HhCCCEE-eccccchHHHHHhhcCCCccEEE
Confidence            477 99999999998888  99999998876552 111        1  1122221 24433 33333333323799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++++.. ......++.++...+++.++.
T Consensus       244 d~~g~~-~~~~~~~~~l~~~G~iv~~g~  270 (344)
T 2h6e_A          244 DLVGTE-ETTYNLGKLLAQEGAIILVGM  270 (344)
T ss_dssp             ESSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCCh-HHHHHHHHHhhcCCEEEEeCC
Confidence            998852 245566677774457776653

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=92.53  E-value=0.21  Score=41.44  Aligned_cols=82  Identities=17%  Similarity=0.072  Sum_probs=53.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|.+....               .++.       ..+++.++++  +.|+|+.+...
T Consensus       152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---------------~~~~-------~~~~l~ell~--~aDvV~l~~P~  207 (404)
T 1sc6_A          152 GYGHIGTQLGILAESLGMYVYFYDIENKLPL---------------GNAT-------QVQHLSDLLN--MSDVVSLHVPE  207 (404)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCC---------------TTCE-------ECSCHHHHHH--HCSEEEECCCS
T ss_pred             eECHHHHHHHHHHHHCCCEEEEEcCCchhcc---------------CCce-------ecCCHHHHHh--cCCEEEEccCC
Confidence            5699999999999999999999998654310               1111       1123556777  78888876654


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++....+|-+|+..+
T Consensus       208 t~~t~~li~~~~l~~mk~ga~lIN~aRg~~  237 (404)
T 1sc6_A          208 NPSTKNMMGAKEISLMKPGSLLINASRGTV  237 (404)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred             ChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence            321  1  1345666775567777776543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=92.52  E-value=0.045  Score=44.61  Aligned_cols=88  Identities=15%  Similarity=0.164  Sum_probs=56.7

Q ss_pred             CCccccchHHH-HHHH-HHcCCe-EEEEEcCCC---ccccCCCCCChhHHhhhhccceEEEecCCChH--HHHHHhhccC
Q 024575            1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKG   72 (265)
Q Consensus         1 tGatG~iG~~l-~~~L-~~~g~~-V~~l~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~   72 (265)
                      +|+ |.+|... ++.+ ...|.+ |++++++++   +. +...          .-++..+  |..+.+  .+.++ .. +
T Consensus       179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~----------~lGa~~v--~~~~~~~~~i~~~-~g-g  242 (357)
T 2b5w_A          179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIE----------ELDATYV--DSRQTPVEDVPDV-YE-Q  242 (357)
T ss_dssp             ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHH----------HTTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred             ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHH----------HcCCccc--CCCccCHHHHHHh-CC-C
Confidence            477 9999999 8777 667987 999999876   41 1111          2355555  554322  24454 43 7


Q ss_pred             ccEEEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +|+||++.|.. ......++.++...+++.++.
T Consensus       243 ~Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~  274 (357)
T 2b5w_A          243 MDFIYEATGFP-KHAIQSVQALAPNGVGALLGV  274 (357)
T ss_dssp             EEEEEECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             CCEEEECCCCh-HHHHHHHHHHhcCCEEEEEeC
Confidence            99999998752 234566677774457777664

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=92.50  E-value=0.16  Score=41.07  Aligned_cols=83  Identities=16%  Similarity=0.174  Sum_probs=54.9

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+ |.+|...++.+...|.+|+++++++.+.. ..        .  .-+...+.   .+.+.+    .+ ++|+||++.+
T Consensus       184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~--------~--~lGa~~v~---~~~~~~----~~-~~D~vid~~g  243 (348)
T 3two_A          184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DA--------L--SMGVKHFY---TDPKQC----KE-ELDFIISTIP  243 (348)
T ss_dssp             SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HH--------H--HTTCSEEE---SSGGGC----CS-CEEEEEECCC
T ss_pred             CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HH--------H--hcCCCeec---CCHHHH----hc-CCCEEEECCC
Confidence            65 99999999988888999999998877621 11        1  12333333   344322    21 8999999988


Q ss_pred             CCccchHHHHHhCCCCCcEEEEec
Q 024575           82 READEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        82 ~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .. ......++.++...+++.++.
T Consensus       244 ~~-~~~~~~~~~l~~~G~iv~~G~  266 (348)
T 3two_A          244 TH-YDLKDYLKLLTYNGDLALVGL  266 (348)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred             cH-HHHHHHHHHHhcCCEEEEECC
Confidence            53 345666677775557777653

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=92.46  E-value=0.055  Score=41.81  Aligned_cols=80  Identities=13%  Similarity=0.049  Sum_probs=49.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|.+.|++|.+.+|+++... .+.        . ..++..       ..++.+++.  ++|+||-+.. 
T Consensus        10 G~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~-~~~--------~-~~g~~~-------~~~~~~~~~--~~D~Vi~~v~-   69 (259)
T 2ahr_A           10 GVGKMASAIIKGLKQTPHELIISGSSLERSK-EIA--------E-QLALPY-------AMSHQDLID--QVDLVILGIK-   69 (259)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHH-HHH--------H-HHTCCB-------CSSHHHHHH--TCSEEEECSC-
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCHHHHH-HHH--------H-HcCCEe-------eCCHHHHHh--cCCEEEEEeC-
Confidence            4799999999999999999999888765421 110        0 012221       122445566  8999998876 


Q ss_pred             CccchHHHHHhCCCCCcEEEE
Q 024575           83 EADEVEPILDALPNLEQFIYC  103 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~  103 (265)
                       ......+++.++..+.+|..
T Consensus        70 -~~~~~~v~~~l~~~~~vv~~   89 (259)
T 2ahr_A           70 -PQLFETVLKPLHFKQPIISM   89 (259)
T ss_dssp             -GGGHHHHHTTSCCCSCEEEC
T ss_pred             -cHhHHHHHHHhccCCEEEEe
Confidence             34555666655533333333

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=92.44  E-value=0.23  Score=41.36  Aligned_cols=61  Identities=16%  Similarity=0.107  Sum_probs=47.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|+.+++.+.+.|++|++++.++......             -.-..+..|+.|.+.+.++++  ++|+|+.
T Consensus        42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~-------------~ad~~~~~~~~d~~~l~~~a~--~~D~V~~  102 (419)
T 4e4t_A           42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA-------------VADRHLRAAYDDEAALAELAG--LCEAVST  102 (419)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH-------------HSSEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhh-------------hCCEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence            458999999999999999999997665542211             122456688999999999887  8999984

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=92.36  E-value=0.024  Score=48.19  Aligned_cols=29  Identities=24%  Similarity=0.362  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|++|..++..|.+.|++|++++|++.+
T Consensus        15 G~G~vG~~lA~~la~~G~~V~~~d~~~~~   43 (478)
T 2y0c_A           15 GSGSVGLVTGACLADIGHDVFCLDVDQAK   43 (478)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            67999999999999999999999998765

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=92.34  E-value=0.2  Score=40.91  Aligned_cols=86  Identities=19%  Similarity=0.271  Sum_probs=45.9

Q ss_pred             CCccccchHHHHHH-HHHcCC---eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRL-LVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~-L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      .||||++|+.+++. |.++++   .++.+..+...  ..++.         ..+..+...|..+++.    +.  ++|+|
T Consensus         7 vGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G--~~v~~---------~~g~~i~~~~~~~~~~----~~--~~DvV   69 (367)
T 1t4b_A            7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG--QAAPS---------FGGTTGTLQDAFDLEA----LK--ALDII   69 (367)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCG---------GGTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC--CCccc---------cCCCceEEEecCChHH----hc--CCCEE
Confidence            48999999999995 544554   55666554221  12210         0122223334444443    34  89999


Q ss_pred             EEcCCCCccchHHHHHhC-C-CCC-cEEEEec
Q 024575           77 YDINGREADEVEPILDAL-P-NLE-QFIYCSS  105 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~-~-~~~-~~v~~Ss  105 (265)
                      |.+.+.  .........+ + +.+ .+|=.|+
T Consensus        70 f~a~g~--~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           70 VTCQGG--DYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EECCCc--hhHHHHHHHHHHCCCCEEEEcCCh
Confidence            999873  2333344333 2 443 4444454

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=92.31  E-value=0.33  Score=42.16  Aligned_cols=65  Identities=14%  Similarity=0.143  Sum_probs=52.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+++++.|.+.|++|+++.+++..... +              ..++.+|-+|++.+.++=- .++|.++-+.+.
T Consensus       355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~--------------~~~i~gD~t~~~~L~~agi-~~ad~vi~~~~~  418 (565)
T 4gx0_A          355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCN-D--------------HVVVYGDATVGQTLRQAGI-DRASGIIVTTND  418 (565)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC-S--------------SCEEESCSSSSTHHHHHTT-TSCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECChHHHhh-c--------------CCEEEeCCCCHHHHHhcCc-cccCEEEEECCC
Confidence            45899999999999999999999999877321 1              1689999999998876543 389999988876


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      +
T Consensus       419 d  419 (565)
T 4gx0_A          419 D  419 (565)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=92.31  E-value=0.14  Score=41.26  Aligned_cols=83  Identities=11%  Similarity=0.041  Sum_probs=56.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|++|++.+|+.... . ..          ..++..        .++.+++.  +.|+|+.+...
T Consensus       172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~-~~----------~~g~~~--------~~l~ell~--~aDvV~l~~P~  229 (335)
T 2g76_A          172 GLGRIGREVATRMQSFGMKTIGYDPIISPE-V-SA----------SFGVQQ--------LPLEEIWP--LCDFITVHTPL  229 (335)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSCHH-H-HH----------HTTCEE--------CCHHHHGG--GCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCCcchh-h-hh----------hcCcee--------CCHHHHHh--cCCEEEEecCC
Confidence            569999999999999999999999876541 0 00          123321        13567777  89999988766


Q ss_pred             Ccc--ch--HHHHHhCCCCCcEEEEecce
Q 024575           83 EAD--EV--EPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~--~~--~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..  +.  ...++.++....+|-+|+..
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~arg~  258 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCARGG  258 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSCTT
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCCcc
Confidence            432  11  34666677666778777644

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=92.17  E-value=0.81  Score=37.39  Aligned_cols=62  Identities=16%  Similarity=0.060  Sum_probs=46.1

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +|.+|+.+++.|.+.|++|++++.++......+             .-..+..|+.|.+.+.+++.  ++|.|+...
T Consensus         9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------~~~~~~~~~~d~~~l~~~~~--~~d~v~~~~   70 (380)
T 3ax6_A            9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV-------------ADEQIVAGFFDSERIEDLVK--GSDVTTYDL   70 (380)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--TCSEEEESC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-------------CceEEECCCCCHHHHHHHHh--cCCEEEecc
Confidence            478899999999999999999987654421111             11346678889999888886  899988643

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=92.17  E-value=0.39  Score=38.98  Aligned_cols=88  Identities=14%  Similarity=0.080  Sum_probs=54.7

Q ss_pred             CccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC--C-hH---HHHHHhhccCcc
Q 024575            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-YD---FVKSSLSAKGFD   74 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~-~~---~~~~~~~~~~~d   74 (265)
                      |+ |.+|...++.+...|. +|+++++++.+.. ..        .  .-++.. ..|..  + .+   .+.+... .++|
T Consensus       179 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a--------~--~lGa~~-vi~~~~~~~~~~~~~i~~~~~-~g~D  244 (356)
T 1pl8_A          179 GA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KA--------K--EIGADL-VLQISKESPQEIARKVEGQLG-CKPE  244 (356)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HH--------H--HTTCSE-EEECSSCCHHHHHHHHHHHHT-SCCS
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HH--------H--HhCCCE-EEcCcccccchHHHHHHHHhC-CCCC
Confidence            64 8999999988888898 8999988765421 11        0  123321 23444  2 22   2222222 4799


Q ss_pred             EEEEcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +||+++|.. ......++.++...+++.++
T Consensus       245 ~vid~~g~~-~~~~~~~~~l~~~G~iv~~G  273 (356)
T 1pl8_A          245 VTIECTGAE-ASIQAGIYATRSGGTLVLVG  273 (356)
T ss_dssp             EEEECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             EEEECCCCh-HHHHHHHHHhcCCCEEEEEe
Confidence            999998742 23456677788556888765

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=92.16  E-value=0.12  Score=43.70  Aligned_cols=83  Identities=11%  Similarity=-0.099  Sum_probs=56.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|++.++++.......           ..++..        .++.+++.  ..|+|+.+.+.
T Consensus       264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g~~~--------~~l~ell~--~aDiVi~~~~t  322 (479)
T 1v8b_A          264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNV--------VTLDEIVD--KGDFFITCTGN  322 (479)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence            4699999999999999999999998865421111           123321        24667787  89999988543


Q ss_pred             CccchHHHHHhCCCCCcEEEEecc
Q 024575           83 EADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ...-....++.++....+|.+++.
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSST
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCCC
Confidence            222234566777766677777764

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=92.15  E-value=0.18  Score=41.80  Aligned_cols=90  Identities=14%  Similarity=0.094  Sum_probs=57.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC-------------Ch-------H
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-------------DY-------D   62 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~-------~   62 (265)
                      |.|-+|..+++.+...|.+|++++|++.... ..        .  ..+..++..|..             +.       +
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~-~~--------~--~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          179 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKE-QV--------Q--SMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCGGGHH-HH--------H--HTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HH--------H--HcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            3599999999999999999999999876521 11        1  123333322221             11       1


Q ss_pred             HHHHHhhccCccEEEEcCCCC---c-c-chHHHHHhCCCCCcEEEEec
Q 024575           63 FVKSSLSAKGFDVVYDINGRE---A-D-EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        63 ~~~~~~~~~~~d~vi~~a~~~---~-~-~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      .+.+.+.  +.|+||.+++..   . . -....++.++....+|.++.
T Consensus       248 ~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          248 LFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             HHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence            4667777  899999996431   1 1 23567888885567777774

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=92.10  E-value=0.22  Score=41.27  Aligned_cols=28  Identities=21%  Similarity=0.266  Sum_probs=25.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (265)
                      |.|.||+.+++.|...|.+|++.+|.+.
T Consensus       163 GlG~IG~~vA~~l~~~G~~V~~yd~~~~  190 (416)
T 3k5p_A          163 GYGNIGSQVGNLAESLGMTVRYYDTSDK  190 (416)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCcch
Confidence            5699999999999999999999998754

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=92.10  E-value=0.14  Score=41.84  Aligned_cols=85  Identities=12%  Similarity=0.063  Sum_probs=55.1

Q ss_pred             ccccchHHHHHHHHHcCCe-EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |.|.||+.+++.|...|.+ |++.+|++..... .        .  ..++..  .     +++.+++.  +.|+|+.+..
T Consensus       171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~-~--------~--~~g~~~--~-----~~l~ell~--~aDvV~l~~P  230 (364)
T 2j6i_A          171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDA-E--------E--KVGARR--V-----ENIEELVA--QADIVTVNAP  230 (364)
T ss_dssp             CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHH-H--------H--HTTEEE--C-----SSHHHHHH--TCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCCccchhH-H--------H--hcCcEe--c-----CCHHHHHh--cCCEEEECCC
Confidence            5699999999999999997 9999887654210 0        0  123221  1     23567777  9999998876


Q ss_pred             CCcc--c--hHHHHHhCCCCCcEEEEecce
Q 024575           82 READ--E--VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        82 ~~~~--~--~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      .+..  +  ....+..++....+|-+|...
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG~  260 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTARGA  260 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCCCc
Confidence            5421  1  134556676556677777644

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=92.09  E-value=0.13  Score=43.70  Aligned_cols=83  Identities=12%  Similarity=0.060  Sum_probs=56.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.++++......           ...++..  .   +   +.+++.  ++|+||.+.+.
T Consensus       281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-----------~~~Ga~~--~---~---l~e~l~--~aDvVi~atgt  339 (494)
T 3ce6_A          281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-----------MMEGFDV--V---T---VEEAIG--DADIVVTATGN  339 (494)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCEE--C---C---HHHHGG--GCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCEE--e---c---HHHHHh--CCCEEEECCCC
Confidence            359999999999999999999999876542110           0134432  1   2   234566  89999998765


Q ss_pred             CccchHHHHHhCCCCCcEEEEecc
Q 024575           83 EADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      ...-....++.++....++.++..
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCCC
Confidence            433334677888866678877753

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=92.01  E-value=0.072  Score=44.48  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=25.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|++|..++..|.+ |++|++.+|++.+
T Consensus        43 GlG~mG~~lA~~La~-G~~V~~~D~~~~~   70 (432)
T 3pid_A           43 GTGYVGLSNGVLIAQ-NHEVVALDIVQAK   70 (432)
T ss_dssp             CCSHHHHHHHHHHHT-TSEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHc-CCeEEEEecCHHH
Confidence            579999999999988 9999999998765

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=91.95  E-value=0.15  Score=43.22  Aligned_cols=84  Identities=11%  Similarity=-0.075  Sum_probs=57.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|++.+|++.......           ..++..        .++.+++.  ..|+|+.+.+.
T Consensus       284 G~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G~~~--------~~l~ell~--~aDiVi~~~~t  342 (494)
T 3d64_A          284 GYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEGYRV--------VTMEYAAD--KADIFVTATGN  342 (494)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcCCEe--------CCHHHHHh--cCCEEEECCCc
Confidence            4699999999999999999999998865421100           123322        13667788  99999988643


Q ss_pred             CccchHHHHHhCCCCCcEEEEecce
Q 024575           83 EADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      ...-....++.++....+|.+++..
T Consensus       343 ~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          343 YHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ccccCHHHHhhCCCCcEEEEcCCCc
Confidence            2222356778888666788787644

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=91.86  E-value=0.11  Score=42.25  Aligned_cols=85  Identities=14%  Similarity=0.069  Sum_probs=56.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|...|.+|++.+|+....  ..          ...+++.       .+++.+++.  +.|+|+.+...
T Consensus       167 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~----------~~~g~~~-------~~~l~ell~--~aDiV~l~~Pl  225 (352)
T 3gg9_A          167 GYGKIGQLVAGYGRAFGMNVLVWGRENSKE--RA----------RADGFAV-------AESKDALFE--QSDVLSVHLRL  225 (352)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSHHHHH--HH----------HHTTCEE-------CSSHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHhCCCEEEEECCCCCHH--HH----------HhcCceE-------eCCHHHHHh--hCCEEEEeccC
Confidence            569999999999999999999998874220  00          0123331       134567777  89999987765


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeccee
Q 024575           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        83 ~~~--~--~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      +..  +  ....+..++....||.+|...+
T Consensus       226 t~~t~~li~~~~l~~mk~gailIN~aRg~~  255 (352)
T 3gg9_A          226 NDETRSIITVADLTRMKPTALFVNTSRAEL  255 (352)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             cHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence            321  1  2356666776677888886553

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=91.84  E-value=0.11  Score=41.28  Aligned_cols=29  Identities=24%  Similarity=0.621  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|.+.|++|++.+|++++
T Consensus        16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   44 (306)
T 3l6d_A           16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGK   44 (306)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=91.83  E-value=0.16  Score=41.20  Aligned_cols=85  Identities=13%  Similarity=0.019  Sum_probs=55.3

Q ss_pred             ccccchHHHHHHHH-HcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+.+++.|. ..|++|++.+|++..... .        .  ..++.+  .     +++.+++.  +.|+|+.+..
T Consensus       170 G~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~-~--------~--~~g~~~--~-----~~l~ell~--~aDvVil~vp  229 (348)
T 2w2k_A          170 GLGAIQKEIARKAVHGLGMKLVYYDVAPADAET-E--------K--ALGAER--V-----DSLEELAR--RSDCVSVSVP  229 (348)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH-H--------H--HHTCEE--C-----SSHHHHHH--HCSEEEECCC
T ss_pred             EECHHHHHHHHHHHHhcCCEEEEECCCCcchhh-H--------h--hcCcEE--e-----CCHHHHhc--cCCEEEEeCC
Confidence            56999999999999 889999999987654210 0        0  113332  1     13456677  8999998876


Q ss_pred             CCcc--ch--HHHHHhCCCCCcEEEEecce
Q 024575           82 READ--EV--EPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        82 ~~~~--~~--~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      .+..  +.  ..++..++....||.+|+..
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~srg~  259 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTARGP  259 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence            5431  22  35667777556677666544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	265
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-22
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-21
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	5e-20
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-18
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-15
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-14
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-13
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-12
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-11
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-10
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	9e-10
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-09
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-09
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	4e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	8e-07
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	4e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.001
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.001
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 92.2 bits (228), Expect = 2e-22
 Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 33/266 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L+  L+++G++V    R  +    +      Q+    + K     GD  D 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
             +   L     D VY++       V    P             +L+A     L    +F
Sbjct: 68  SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
              S++ +Y     +P  ET    P+S +   KL    +     ES G+   +       
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187

Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            P          +     +  +        G+   +   GH KD  +    +L  E+   
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245

Query: 211 QVFNISGEKYVTFDGLARACAKVTGL 236
           + F I+     +        A   G+
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGI 271

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 89.5 bits (221), Expect = 2e-21
 Identities = 46/257 (17%), Positives = 85/257 (33%), Gaps = 24/257 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
           GG  FIG    R L+   +            +    G  ++    +   ++  + GD +D
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 61  YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
              +             +A+              E        +L       + + ++ S
Sbjct: 67  AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPL- 158
           +  VY   D     E+  ++P S +   K  ++ V      + G++    R    YGP  
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186

Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           +   +   F   L  G  +P+ G G  V +  H  D  R    VL   +A  ++++I G 
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245

Query: 219 KYVTFDGLARACAKVTG 235
             +T   L        G
Sbjct: 246 LELTNRELTGILLDSLG 262

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 5e-20
 Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 47/265 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  F+G  L+  L+ +GH+VT+         + +              I H   +  ++
Sbjct: 8   GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
           D V+        D +Y      +        PI     N                + +  
Sbjct: 57  DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113

Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
           S++ VY   ++ P  E      + + P++   +GK   E++     + +GV     R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +  
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231

Query: 211 QVFNISGEKYVTFDGLARACAKVTG 235
              N+   +  T    A+    + G
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVG 256

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 79.8 bits (196), Expect = 8e-18
 Identities = 47/267 (17%), Positives = 78/267 (29%), Gaps = 52/267 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           GG  FIG  + R ++K      V +     A   + L   S+     F         D  
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60

Query: 60  DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
           D   +         D V      +  +     P      N+                   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 99  ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
                 +F + S+  VY         E     P                 K +++ ++  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
              + G+          YGP ++   +          G+P+PI G G Q+    +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTF 223
           RA   V+   KA  + +NI G      
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKN 266

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 72.9 bits (177), Expect = 1e-15
 Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F   +S    + G   D+
Sbjct: 10  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV    G    E +  +          +  + S  G  + +      
Sbjct: 68  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                + K++ +  +       ++G+ +T +      G   +                + 
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVTG 235
           I G G         +D+    ++ + + +   +  +       ++ + L     K   
Sbjct: 178 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 235

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 67.9 bits (164), Expect = 9e-14
 Identities = 22/240 (9%), Positives = 62/240 (25%), Gaps = 15/240 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R +         +              ++    D+
Sbjct: 10  GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 62  DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
             +  +L      +         +                  +    S  G+        
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
             E            K      +E+  + +T +      G      + +   H +     
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKVTG 235
           + I G G          D+    ++ + + +   + ++       ++   + +   +++ 
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (164), Expect = 1e-13
 Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 34/266 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G +L+  L+++G++V    R   +    ++        A     +    GD  D
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67

Query: 61  YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
              +   ++      +                    D++G     +   +    L N  +
Sbjct: 68  STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
           F   S++ +Y K   +P  ET    P+S +   KL    ++    E+  +   +      
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187

Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
             P          +                 G+       GH KD   A   +L N++  
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP- 246

Query: 210 RQVFNISGEKYVTFDGLARACAKVTG 235
            + F I+  +  +            G
Sbjct: 247 -EDFVIATGEVHSVREFVEKSFLHIG 271

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (158), Expect = 2e-13
 Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 22/217 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P  +     +        K      
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +   L     D+       E             +++ + C+SA +      +P     
Sbjct: 70  AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
               ++     +    VL   G+ + ++ P                  +   G    +  
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTL 167

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
            G   +++    DL    ++ L  ++        S +
Sbjct: 168 DGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 66.5 bits (161), Expect = 2e-13
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 27/261 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+K   +V           + L         +  S    ++GD ++ 
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 62  DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
           D    +            +        +PI     N++                F Y +S
Sbjct: 83  DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142

Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
           +  Y     LP  E     P S     ++  +L  +      G +   LR   ++G    
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202

Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFN 214
               Y  V   +   +  G  + I G G       ++++  +A +        A  QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262

Query: 215 ISGEKYVTFDGLARACAKVTG 235
           I+     + + L  A      
Sbjct: 263 IAVGGRTSLNQLFFALRDGLA 283

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 64.3 bits (155), Expect = 2e-12
 Identities = 32/239 (13%), Positives = 64/239 (26%), Gaps = 18/239 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +    +         G   +
Sbjct: 10  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
                  +               +   + I       +      +   Y+ S +  H   
Sbjct: 61  NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
                      K   E+ +   G+  T +            P   +    +  G      
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177

Query: 180 PGSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTG 235
           P    I +  L    D+  A +Q+  +  +K +     ++ E   +   +  A ++   
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALN 235

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 59.5 bits (143), Expect = 5e-11
 Identities = 48/281 (17%), Positives = 85/281 (30%), Gaps = 72/281 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + R L + G    +                              + +  D 
Sbjct: 9   GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43

Query: 62  DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
             V    +++  D VY            N   AD +   +    N+          + ++
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
             S+ +Y K    P  E++ +              K+    + ES     G ++ S+ P 
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
            +YGP  N++P        L              + + GSG  + +  HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223

Query: 203 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKVTG 235
           +                  N+      T   LA+  AKV G
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVG 264

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.3 bits (137), Expect = 3e-10
 Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 36/264 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L++LL+++G++V      ++                    I +  GD  D 
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61

Query: 62  DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
             V+ ++       V                     ++G     +   +       +F  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
            S++ ++         E     P+S +      G   T +  ES G++ +S        P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181

Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           L               R+K G+   +  G+       G   D   A   +L  +K     
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239

Query: 213 FNISGEKYVTFDGLARACAKVTGL 236
           + ++     T   + +   +  GL
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGL 263

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 56.1 bits (134), Expect = 9e-10
 Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 55/282 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG+ +IG      L++ GH V +       K  +   +     +           ++GD 
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59

Query: 59  KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
           ++   +   L     D V     +        +P+     N               ++ F
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
           I+ SSA VY     +P+ E+                  ++ T+        +   LR   
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 195
             G      + E           +  ++  GR   + I G+      G  V    HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 196 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKVTG 235
           A   V  +          ++N+      +   +  A +K  G
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG 281

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.2 bits (131), Expect = 9e-10
 Identities = 29/251 (11%), Positives = 60/251 (23%), Gaps = 27/251 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +   G  + + L +   +       ++   ++  G     F    +    +    +  
Sbjct: 10  GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDAL--------------PNLEQFIYCSSAG 107
           D +    SA           +         D                   +         
Sbjct: 70  DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVV 129

Query: 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
           V       P    + +   +    K   E  L   G  +T +R   +         E   
Sbjct: 130 VGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK------EGGV 183

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY---VTFD 224
              L       +      V       D+A   +Q L  E+A  + F++  +         
Sbjct: 184 RELLVGKDDELLQTDTKTV----PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 239

Query: 225 GLARACAKVTG 235
                 ++VT 
Sbjct: 240 DFKALFSQVTS 250

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.0 bits (131), Expect = 2e-09
 Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 28/259 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FI   ++R L  EGH V      K     +     +    +       LK   +  
Sbjct: 22  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
           D V +  +  G       N         +          +  +++F Y SSA        
Sbjct: 81  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140

Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
           +   +  L   +    +P+      KL TE + +      G+     R   IYGP     
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200

Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                    +      +     + G G+Q      + +     +++   +   R+  NI 
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258

Query: 217 GEKYVTFDGLARACAKVTG 235
            ++ V+ + +A        
Sbjct: 259 SDEMVSMNEMAEMVLSFEE 277

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.7 bits (130), Expect = 2e-09
 Identities = 35/246 (14%), Positives = 63/246 (25%), Gaps = 33/246 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G T   G +L+  L+ +G++V    R  +    Q       +    +  ++ L   D  D
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 61  YDFVKSSLSAKGFDVVYDI----------------------NGREADEVEPILDALPNLE 98
              ++  +     D VY++                            E            
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
              Y + +     S   P  ET    P+S +          T +  E+ G+   +     
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187

Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
              P          +           +     G+       G   D   A   +L  EK 
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247

Query: 209 SRQVFN 214
              V  
Sbjct: 248 DDYVVA 253

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 53.2 bits (126), Expect = 7e-09
 Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 65/291 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L+   + +G  +     L  +G       L    + EF         + GD
Sbjct: 7   GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
            ++ + V   ++    D  + + G+ A       P +D   N+                 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
             IY S+  VY   +   + ET+T           +  + L                   
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 188
                G+N    R   +YG   +   ++ +           +    +P  I G+G QV  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 189 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKVTGL 236
           + H +D+   +   L N    R        +    ++   L +       +
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 288

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 52.7 bits (125), Expect = 1e-08
 Identities = 45/267 (16%), Positives = 73/267 (27%), Gaps = 37/267 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG      +      V +    K   A    G      A    ++  + GD  D 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64

Query: 62  DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
           + V    +     V Y   +  +    +P      N                     S+ 
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
            VY    L+ DL  H              +P S +   K  ++ ++     S GV  T  
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184

Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
                YGP  +           + AG    + G G  V    H  D +     +L   + 
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244

Query: 209 SRQVFNISGEKYVTFDGLARACAKVTG 235
                  +  +    + L     K+  
Sbjct: 245 GETYLIGADGEKNNKEVLELILEKMGQ 271

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.8 bits (120), Expect = 4e-08
 Identities = 45/290 (15%), Positives = 82/290 (28%), Gaps = 63/290 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  +IG      L++ G+   +    +        +L   +          I   + D 
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60

Query: 59  KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
            D   ++        D V                  Y  N      V   L    N+ +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
           ++ SSA VY  +    +++P  E   + P + +   K   E++L        K   +  L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 197
           R     G      + E                 +     + I G          ++D   
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

Query: 198 AFVQVLGNEKASR------------QVFNISGEKYVTFDGLARACAKVTG 235
                 G+  A +            + +N+   K  T   +  A  K +G
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG 290

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 3e-07
 Identities = 31/230 (13%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F     +    + 
Sbjct: 21  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
                                G E          L + E           L S       
Sbjct: 81  HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
           ++ +  + + +       V E K   ++  RP  +      +   EW   +         
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGS 186

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                       V  + RA +  +      +Q+  +  +       L +A
Sbjct: 187 LPDSWASGHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.3 bits (108), Expect = 8e-07
 Identities = 26/212 (12%), Positives = 52/212 (24%), Gaps = 20/212 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L   ++ E     +    +  +A+    ++                  +  
Sbjct: 9   GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGP------------LAELL 56

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +  S+      +   I    ++E    +D    L         G      +       
Sbjct: 57  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
                         +++ E      T  RP  ++GP     + E     +       I  
Sbjct: 117 KSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILP 171

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
                       DLARA  ++   E    +  
Sbjct: 172 GKYHGI---EACDLARALWRLALEEGKGVRFV 200

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (104), Expect = 5e-06
 Identities = 44/281 (15%), Positives = 80/281 (28%), Gaps = 47/281 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
           GG  +IG      L++ G+    +     A        ES +   E + + +   + D  
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 60  DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
           D   ++       F  V     +        +P+     NL   I             L 
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 117 HCETDTVDPKSRH-----------------KGKLNTESVLES-----KGVNWTSLRPVYI 154
              + TV    ++                 K K   E ++       K  N   LR    
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188

Query: 155 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 196
            G      + E           +  ++  GR   +           G  V    HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248

Query: 197 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           +  +       E+   +++N+      +   + +A  K +G
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG 289

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.0 bits (94), Expect = 9e-05
 Identities = 25/277 (9%), Positives = 63/277 (22%), Gaps = 50/277 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   F+   +   L++ G++V    R  + +A        +    F + +     D    
Sbjct: 18  GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74

Query: 62  DFVKSSLSAKGFDV----VYDINGREADEVEPILDALPNLEQFIYC------------SS 105
                 +           V   + +  + V P +    N  +                + 
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134

Query: 106 AGVYLKSDLLPHCETDTVDPKSRH-------------------KGKLNTESVLESKGVNW 146
           + +  K ++      +                             K   E          
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194

Query: 147 TSLRPVY----------IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
                +           I+ P   +     +   L  G   P     +         D+ 
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
              +  L   +  R+    +   +  ++ +     K+
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTF-DWNTVLATFRKL 289

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 38.7 bits (88), Expect = 4e-04
 Identities = 26/236 (11%), Positives = 66/236 (27%), Gaps = 16/236 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + + L  +  +V         I               +      K +    
Sbjct: 8   GANGQLGREIQKQLKGKNVEVIPTDVQDLDIT---------NVLAVNKFFNEKKPNVVIN 58

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
               +++                        A     + +  S+  V+      P  E D
Sbjct: 59  CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118

Query: 122 T-VDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
                 +  K KL  E+ +++    +  +R  ++YG  N          +      +   
Sbjct: 119 EVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHD 178

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
             G   + +   +      V +   ++ +   F+ + +   ++   A    ++TG+
Sbjct: 179 QVGTPTSTVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGI 228

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T F G +LS  L   G  V  ++     +          E A  +  +    GD +D 
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68

Query: 62 DFV 64
          + +
Sbjct: 69 NKL 71

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 37.2 bits (84), Expect = 0.001
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 23/79 (29%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T  +G  L R L   G+ + L    K                          GD  + 
Sbjct: 7  GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43

Query: 62 DFVKSSLSAKGFDVVYDIN 80
            V  ++     DV+ +  
Sbjct: 44 KGVAETVRKLRPDVIVNAA 62

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 44/318 (13%), Positives = 82/318 (25%), Gaps = 84/318 (26%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLF------------TRGKAPIAQQLPGESDQEFAEFS 48
           GG  +IG    R L+++  H V +                +  +A++L      +     
Sbjct: 9   GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWAD 68

Query: 49  SKILHLKGDRKDYDFVK----SSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
                  GD ++ DF+               +           +P+     N+   +   
Sbjct: 69  RYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLL 128

Query: 105 SAGVYLKSDLLPHCETDTVDP---------------------------KSRHKGKLNTES 137
            A +  K D +    +  +                             +S+   +     
Sbjct: 129 QAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD 188

Query: 138 VLESKGVNWTSLRPVYIYGPLNYNPVEEWF--------------------------FHRL 171
             E+ G+    LR     G      + E +                              
Sbjct: 189 CAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDA 248

Query: 172 KAGRPIPIPGS------GIQVTQLGHVKDLARAFVQVLGN--------EKASRQVFNISG 217
              + +PI G+      G  V    HV DLA A +  L          +     VFN+  
Sbjct: 249 STDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT 308

Query: 218 EKYVTFDGLARACAKVTG 235
            +  +   +     K TG
Sbjct: 309 SRGYSVREVIEVARKTTG 326

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	265
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.97
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.93
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.93
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.91
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.86
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.69
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.68
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.67
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.67
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.66
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.66
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.66
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.66
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.65
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.65
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.65
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.64
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.64
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.63
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.63
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.63
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.62
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.62
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.62
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.62
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.61
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.61
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.61
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.6
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.59
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.59
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.59
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.58
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.58
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.58
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.58
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.56
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.56
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.55
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.54
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.54
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.54
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.53
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.53
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.51
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.5
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.5
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.45
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.44
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.43
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.43
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.43
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.42
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.38
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.38
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.36
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.33
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.31
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.28
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.27
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.27
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.26
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.25
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.21
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.16
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.12
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.1
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.08
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.95
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.91
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.71
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.74
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.49
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.27
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.25
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.2
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.16
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.01
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.96
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.86
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.8
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.8
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.8
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.73
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.72
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.47
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.39
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.31
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.3
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.26
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.13
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.97
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.73
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.72
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.65
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.63
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.58
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.54
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.54
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.46
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.46
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.46
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.45
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.43
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.41
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.38
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.32
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.31
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.27
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.18
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.03
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.02
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.89
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.76
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.71
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	94.63
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.57
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	94.46
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	94.35
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.27
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.18
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	94.16
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.12
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.93
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	93.92
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.9
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.88
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	93.65
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.31
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.26
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	93.03
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.98
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	92.81
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.67
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	92.59
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.54
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.51
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.25
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.24
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.11
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	92.09
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.05
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.95
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.68
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.6
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	91.6
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.19
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.07
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.07
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	90.98
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	90.98
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	90.96
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	90.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.91
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	90.67
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	90.43
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.42
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.29
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	90.07
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.05
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	89.96
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	89.4
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	89.38
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	88.92
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	88.92
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.85
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	88.74
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	88.43
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	88.39
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	88.18
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	88.09
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.91
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	87.77
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	87.52
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.34
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	86.99
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	86.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	86.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	86.84
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.72
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	86.37
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.32
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	86.26
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.2
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	85.89
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	85.25
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	85.21
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	84.96
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	84.89
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	84.87
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	84.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	84.56
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	84.42
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	84.29
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.7
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	83.67
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	83.27
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.65
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	82.45
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	82.2
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	81.69
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	80.93
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	80.86

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-38  Score=259.93  Aligned_cols=235  Identities=19%  Similarity=0.164  Sum_probs=183.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++|+++|+++|++|++++|..+... ..+.. ..+.......+++++++|++|.+++.+++++.++|+|||+
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~   85 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDH-IYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHH-HHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEe
Confidence            799999999999999999999999999764311 11111 1111122246899999999999999999997788999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      |+..                ..++.+++++|+     +.++|||+||..+||.....+++|+++..|.+.| .+|..+|+
T Consensus        86 aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~  165 (357)
T d1db3a_          86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (357)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Confidence            9862                345788999875     4457999999999998888899999999998877 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCCCc----hhHHHHHHHHcCCc-ccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      +++    +.+++++++||+++|||+....    .+...+.....++. ...++++++.++++|++|++++++.+++++. 
T Consensus       166 ~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~~-  244 (357)
T d1db3a_         166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (357)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCCC-
Confidence            874    4589999999999999974332    23333444444443 4445888999999999999999999998753 


Q ss_pred             cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          209 SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       209 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                       ++.||+++++.+|+.|+++++.+.+|...
T Consensus       245 -~~~yni~sg~~~s~~~~~~~~~~~~g~~~  273 (357)
T d1db3a_         245 -PEDFVIATGVQYSVRQFVEMAAAQLGIKL  273 (357)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred             -CCeEEECCCCceehHHHHHHHHHHhCCcc
Confidence             57999999999999999999999998654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=9.2e-37  Score=247.35  Aligned_cols=230  Identities=20%  Similarity=0.292  Sum_probs=193.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEE------EEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTL------FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~------l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d   74 (265)
                      ||||||||++|++.|+++|++|++      +++........     .........+++++.+|..+.........  .+|
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d   78 (322)
T d1r6da_           6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-----NLAPVDADPRLRFVHGDIRDAGLLARELR--GVD   78 (322)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-----GGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-----HhhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence            799999999999999999985544      43322211000     00001113679999999999998888887  999


Q ss_pred             EEEEcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhH
Q 024575           75 VVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (265)
Q Consensus        75 ~vi~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (265)
                      .|+|+|+..                ..++.++++++.  ++++|||+||..+||.....+++|+++..|.+.| .+|..+
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~  158 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGS  158 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            999999763                446788999987  7899999999999999988899999999999888 999999


Q ss_pred             HHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       136 E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      |.+++    +.+++++++||+++|||++. ..+++.++.++..++++.+++++++.++|+|++|+|++++.+++++.. +
T Consensus       159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~-~  237 (322)
T d1r6da_         159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA-G  237 (322)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-T
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC-C
Confidence            99873    56899999999999999854 567888999999999998889999999999999999999999988764 6


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +.||+++++.+++.|+++.+++.+|.+.
T Consensus       238 ~~~ni~~~~~~s~~e~~~~i~~~~~~~~  265 (322)
T d1r6da_         238 EIYHIGGGLELTNRELTGILLDSLGADW  265 (322)
T ss_dssp             CEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             CeeEEeecccchhHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999886

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-37  Score=248.26  Aligned_cols=232  Identities=20%  Similarity=0.281  Sum_probs=184.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++|+++|+++|++|++++|........+.           ......++|+.+.+.+..++.  ++|+|||+|
T Consensus         7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~--~~d~VihlA   73 (312)
T d2b69a1           7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINHDVVEPLYI--EVDQIYHLA   73 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-----------GGTTCTTEEEEECCTTSCCCC--CCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-----------HhcCCCceEEEehHHHHHHHc--CCCEEEECc
Confidence            7999999999999999999999999875544322221           112222334444444445555  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCC-----CCCCccccc-cchhhHHH
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~E~  137 (265)
                      +..                +.++.+++++++ ...++||+||..+||.....+..|+     ++..|.+.| .+|..+|.
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence            862                235778999988 3358999999999998766666654     345677777 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCC---CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccC
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (265)
                      +++    +.+++++++||+++|||+..   ..+++.++..+..++++.+++++.+.++++|++|++++++.+++...  +
T Consensus       154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~--~  231 (312)
T d2b69a1         154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--S  231 (312)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--C
T ss_pred             HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc--C
Confidence            883    56899999999999999743   45788899999999998888999999999999999999999987764  5


Q ss_pred             ceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCc
Q 024575          211 QVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       211 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      +.||+++++.+++.++++++++.+|.+.    ++...+...
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~  268 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQ  268 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCC----CEEEECCCT
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCC----ceEECCCCC
Confidence            6899999999999999999999999887    666665543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=5.6e-35  Score=238.62  Aligned_cols=236  Identities=20%  Similarity=0.181  Sum_probs=195.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++|+++|+++||+|++++|........+..............++++.+|..|...+.....  +++.|+|++
T Consensus        22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~   99 (341)
T d1sb8a_          22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA   99 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence            799999999999999999999999998554321111000000001113578999999999998888887  999999998


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh-
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (265)
                      +..                +.++.+++++|+  ++++|||+||..+||.....+.+|+.+..|.+.| .+|..+|+++. 
T Consensus       100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence            752                456889999988  7889999999999999888899999999999988 99999999873 


Q ss_pred             ---hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc-ccCc
Q 024575          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQ  211 (265)
Q Consensus       141 ---~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~  211 (265)
                         ..+++++++||+++|||+..     ..++..++..+..++++.+++++.+.++|+|++|++.++..++..+. ..++
T Consensus       180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~  259 (341)
T d1sb8a_         180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ  259 (341)
T ss_dssp             HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence               46899999999999998742     34677888889999999888999999999999999999999887653 4577


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      +|++++++.+|+.|+++.+.+.++.+.
T Consensus       260 ~~~~~~~~~~si~~i~~~i~~~~~~~~  286 (341)
T d1sb8a_         260 VYNIAVGGRTSLNQLFFALRDGLAENG  286 (341)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHHTT
T ss_pred             eeeecccccchHHHHHHHHHHHhcccc
Confidence            999999999999999999999998654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.1e-34  Score=238.36  Aligned_cols=230  Identities=20%  Similarity=0.227  Sum_probs=184.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc--cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++|+++|++.|++|++..++.....  ..+....      ...+++++.+|++|.+.+.+++...++|+|||
T Consensus         6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS------ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh------hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999998655554332211  1111110      03689999999999999999998778999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-----------CCCcEEEEecceeeecCCCCCC----------CCCC
Q 024575           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLPH----------CETD  121 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~-----------~~~~~v~~Ss~~~~~~~~~~~~----------~e~~  121 (265)
                      +|+..                ..++.+++++|+           ++++||++||..+||.....+.          .|..
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            99863                234667888764           2468999999999986543322          2444


Q ss_pred             CCCccccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCC-CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      +..|.+.| .+|..+|.++.    +.+++++++||+++|||++. ..+++.++..+..++++.+++++++.++|+|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            55677767 99999999884    46899999999999999854 46788899999999988888999999999999999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCCC
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL  237 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  237 (265)
                      |+++..+++++.. ++.||+++++.++..|+++.+.+.++..
T Consensus       240 a~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~~~~  280 (361)
T d1kewa_         240 ARALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLLDEI  280 (361)
T ss_dssp             HHHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhcccc
Confidence            9999999988754 6799999999999999999999887543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.7e-33  Score=225.53  Aligned_cols=242  Identities=23%  Similarity=0.292  Sum_probs=186.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh-hhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++|++.|+++||+|++++|........+.     ... ....+++++++|++|.+.+.++++..++|+|||+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH-----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH-----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            7999999999999999999999999875544221111     111 1135899999999999999999998889999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC-CCCccccc-cchhhHHHHH
Q 024575           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~-~~~~~~~~-~~k~~~E~~~  139 (265)
                      |+..                ..++.+++++|+  ++++||++||..+|+.....+..|.. ...|.+.| .+|..+|.++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            9862                345788999987  89999999999999877666555554 34566666 9999999987


Q ss_pred             h-----hcCCceeEeecceeeCCCCC-----------CchhHHHHHHHHcC-CcccCCC------CCCceeeeeeHHHHH
Q 024575          140 E-----SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLA  196 (265)
Q Consensus       140 ~-----~~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a  196 (265)
                      .     ..+++++++|++++|||+..           ..++..++...... .++.+++      ++.+.++|+|++|++
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~  240 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence            4     24789999999999998532           23455555555443 2444333      467889999999999


Q ss_pred             HHHHHHhcC--ccccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCc
Q 024575          197 RAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      .++..+...  ....+++||+++++.+|+.|+++.+.+.+|.+.    ++...+..+
T Consensus       241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~----~~~~~~~~~  293 (338)
T d1udca_         241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV----NYHFAPRRE  293 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCC----CEEEECCCT
T ss_pred             hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCC----ceEECCCCC
Confidence            888776643  333467999999999999999999999999887    666666543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-33  Score=227.44  Aligned_cols=236  Identities=17%  Similarity=0.133  Sum_probs=186.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccc-cCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++|+++|+++||+|++++|.+.... ..+.............+++++.+|++|.+.+.+++...++++++|+
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~   86 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL   86 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence            799999999999999999999999999765421 1111111111122235789999999999999999988899999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHH
Q 024575           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      ++..                +.++.+++++++     +.++|||+||..+||.....+++|+++..|.+.| .+|..+|+
T Consensus        87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~  166 (347)
T d1t2aa_          87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  166 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            8753                335778888765     4468999999999998888899999999999877 99999999


Q ss_pred             HHh----hcCCceeEeecceeeCCCCCCch-----hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       138 ~~~----~~~~~~~i~r~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      ++.    +.+++++++||+++|||......     ...+............++++++.++++|++|+++++..++++...
T Consensus       167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~  246 (347)
T d1t2aa_         167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP  246 (347)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSC
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCCC
Confidence            873    46899999999999999643322     222344444556666678999999999999999999999988653


Q ss_pred             cCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          209 SRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       209 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                        +.|+++.....++.+..+.+...++...
T Consensus       247 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (347)
T d1t2aa_         247 --EDFVIATGEVHSVREFVEKSFLHIGKTI  274 (347)
T ss_dssp             --CCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             --ccceeccccccccchhhhhhhhhhccee
Confidence              5788998899999999999999999875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.5e-33  Score=227.77  Aligned_cols=231  Identities=18%  Similarity=0.210  Sum_probs=184.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++||+|++++|.........           .....+..+|+.+.+.+.++++  ++|.|||++
T Consensus        21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a   87 (363)
T d2c5aa1          21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA   87 (363)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence            799999999999999999999999988665522111           2567889999999999999888  999999999


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCC-------CCCCCCccccc-cchh
Q 024575           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC-------ETDTVDPKSRH-KGKL  133 (265)
Q Consensus        81 ~~~-----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~-------e~~~~~~~~~~-~~k~  133 (265)
                      +..                 ..++.+++++++  ++++||++||..+|+.....+..       +..+..|.+.| .+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            763                 234678888876  88999999999999865544433       33345667767 9999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCCC------chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      .+|++++    ..+++++++||+++|||++..      ..................++++.+.++|+|++|+++++..++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9999874    468999999999999987421      122233344445556667788999999999999999999998


Q ss_pred             cCccccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCC
Q 024575          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPK  250 (265)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  250 (265)
                      +.+.  ++.||+++++.+++.|+++.+.+.+|.+.    ++...+..
T Consensus       248 ~~~~--~~~~ni~~~~~~s~~~l~~~i~~~~g~~~----~i~~~~~~  288 (363)
T d2c5aa1         248 KSDF--REPVNIGSDEMVSMNEMAEMVLSFEEKKL----PIHHIPGP  288 (363)
T ss_dssp             HSSC--CSCEEECCCCCEEHHHHHHHHHHTTTCCC----CEEEECCC
T ss_pred             hCCC--CCeEEEecCCcccHHHHHHHHHHHhCCCC----ceEeCCCC
Confidence            8753  57999999999999999999999999987    66666543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.2e-32  Score=221.36  Aligned_cols=231  Identities=18%  Similarity=0.140  Sum_probs=186.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++||+|++++|........     ........++++++++|++|.+.+.+.+....+++++|++
T Consensus         6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRW-----RLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCH-----HHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHH-----HHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            79999999999999999999999999986542110     0000111467999999999999999999877889999998


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh
Q 024575           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~  140 (265)
                      +..                ..++.+++++++  + .++|+++||..+|+.....+.+|+.+..|.+.| .+|..+|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            752                345778888877  4 568999999999998888888899998898888 99999999874


Q ss_pred             ----hcCCceeEeecceeeCCCCCCch----hHHHHHHHHcC-CcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCc
Q 024575          141 ----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (265)
Q Consensus       141 ----~~~~~~~i~r~~~i~g~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (265)
                          +.+++++++||+++|||......    +..++.+...+ .....++++++.++|+|++|+|+++..+++++.  ++
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~  238 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD  238 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC
T ss_pred             HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--cC
Confidence                46899999999999999743322    22333444444 344456889999999999999999999998875  46


Q ss_pred             eEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          212 VFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       212 ~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      .||+++++..++.++++.+.+.+|.+.
T Consensus       239 ~~ni~~~~~~s~~~~~~~~~~~~~~~~  265 (321)
T d1rpna_         239 DYVVATGVTTTVRDMCQIAFEHVGLDY  265 (321)
T ss_dssp             CEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             CceecccccceehhhhHHHHHHhCCCc
Confidence            899999999999999999999999875

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.5e-32  Score=224.60  Aligned_cols=230  Identities=17%  Similarity=0.166  Sum_probs=185.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHh-hhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++|+++|+++|++|.++.++.........     ... ....+++++.+|+.|.+.+.+++.  +.+.|+|+
T Consensus         8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~-----~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~   80 (346)
T d1oc2a_           8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA-----NLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHY   80 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG-----GTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH-----HHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhh
Confidence            7999999999999999999987777765322111000     000 013689999999999999999998  99999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecC------------CCCCCCCCCCCCccccc-
Q 024575           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~------------~~~~~~e~~~~~~~~~~-  129 (265)
                      |+..                ..++.++++++. ...++|++||..+||..            ......++++..|.+.| 
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            8863                345778888887 45789999999999742            12345566677788877 


Q ss_pred             cchhhHHHHHh----hcCCceeEeecceeeCCCC-CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      .+|..+|.+++    +.+++++++||+++|||+. ....+..++.....+..+.+++++++.++++|++|+|++++.++.
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~  240 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT  240 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence            99999998874    5689999999999999975 345667777777888888888999999999999999999999888


Q ss_pred             CccccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++.. ++.|++++++..++.++++.+.+.++.+.
T Consensus       241 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  273 (346)
T d1oc2a_         241 KGRM-GETYLIGADGEKNNKEVLELILEKMGQPK  273 (346)
T ss_dssp             HCCT-TCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             hccc-CccccccccccccchHHHHHHHHHhCCCC
Confidence            7764 66999999999999999999999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-32  Score=222.13  Aligned_cols=226  Identities=19%  Similarity=0.211  Sum_probs=181.9

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHH-HhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~d~vi~   78 (265)
                      ||||||||++|+++|+++| ++|+++++..........          ..+++++++|+++.+.+.+ ++.  ++|+|||
T Consensus         6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih   73 (342)
T d2blla1           6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (342)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence            7999999999999999998 589999887655333332          3789999999998766655 555  8999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCC-------CCCccccc-cchh
Q 024575           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-------TVDPKSRH-KGKL  133 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~-------~~~~~~~~-~~k~  133 (265)
                      +|+..                ..++.++++++. ...+++++||..+|+........+..       ...|...| .+|.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence            99863                445788999987 55677899999999876655444432       22455556 8999


Q ss_pred             hHHHHHh----hcCCceeEeecceeeCCCCC---------CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       134 ~~E~~~~----~~~~~~~i~r~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|+++.    +.+++++++|++.+|||...         ......++..++.++++.+++++++.++++|++|+++++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            9999884    45899999999999998532         2246677888888998888899999999999999999999


Q ss_pred             HHhcCcc--ccCceEEecCCC-ccCHHHHHHHHHHHhCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~  238 (265)
                      .+++++.  ..+++||+++++ .+|+.|+++.+.+.+|...
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~  274 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  274 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCc
Confidence            9998753  357899998765 4899999999999999776

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=6.1e-31  Score=214.98  Aligned_cols=241  Identities=19%  Similarity=0.209  Sum_probs=179.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++|++|++++|..........    ........+++++++|+.|.+.+..++...++|+|||+|
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            7999999999999999999999999865443111000    001111357999999999999999999888999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCC----CCCCCCCCCCCccccc-cchhhHHH
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES  137 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~----~~~~~e~~~~~~~~~~-~~k~~~E~  137 (265)
                      +..                ..++.+++++|+  ++++||++||..+||...    ..+..|+.+..|.+.| .+|..+|+
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~  162 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN  162 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence            863                335678889887  889999999999998643    3557777888888877 99999999


Q ss_pred             HHhh------cCCceeEeecceeeCCCC-----------CCchhHHHHHHHHc-CCcccCCCCC------CceeeeeeHH
Q 024575          138 VLES------KGVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLKA-GRPIPIPGSG------IQVTQLGHVK  193 (265)
Q Consensus       138 ~~~~------~~~~~~i~r~~~i~g~~~-----------~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~i~~~  193 (265)
                      +++.      .+++++++||+++||+..           ...++..++..... .+++.+++++      ...++++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~  242 (347)
T d1z45a2         163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV  242 (347)
T ss_dssp             HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence            8742      478999999999998642           12344444544433 3456665544      4567899999


Q ss_pred             HHHHHHHHHhcC------ccccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCC
Q 024575          194 DLARAFVQVLGN------EKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTP  249 (265)
Q Consensus       194 D~a~~~~~~~~~------~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  249 (265)
                      |.+.+++.+++.      ....+++||+++++++|+.|+++.+.+.+|.+.    ++...+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~----~~~~~~~  300 (347)
T d1z45a2         243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL----PYKVTGR  300 (347)
T ss_dssp             HHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC----CC-----
T ss_pred             cccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCC----ceEeCCC
Confidence            999988887753      223467999999999999999999999999887    5544443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=9.2e-31  Score=217.42  Aligned_cols=235  Identities=16%  Similarity=0.168  Sum_probs=174.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCC---------ccccCCCCCCh--hHHh-hhhccceEEEecCCChHHHHHHh
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKA---------PIAQQLPGESD--QEFA-EFSSKILHLKGDRKDYDFVKSSL   68 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~---------~~~~~~~~~~~--~~~~-~~~~~~~~~~~D~~~~~~~~~~~   68 (265)
                      ||||||||++|+++|+++||+|++++.-..         ...........  ..+. ....+++++.+|++|.+.+.+++
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~   86 (393)
T d1i24a_           7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   86 (393)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence            799999999999999999999999862100         00000100000  0111 11357999999999999999999


Q ss_pred             hccCccEEEEcCCCC-------------------ccchHHHHHhCC--CC-CcEEEEecceeeecCCCCCC---------
Q 024575           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPH---------  117 (265)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~l~~~~~--~~-~~~v~~Ss~~~~~~~~~~~~---------  117 (265)
                      +..++|+|||+|+..                   +.++.+++++++  +. ++++++||..+|+.......         
T Consensus        87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~  166 (393)
T d1i24a_          87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHN  166 (393)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEET
T ss_pred             HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccccccccc
Confidence            977899999999852                   345778899877  44 56888888888865432110         


Q ss_pred             ----CCCCCCCccccc-cchhhHHHHH----hhcCCceeEeecceeeCCCCC------------------CchhHHHHHH
Q 024575          118 ----CETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFHR  170 (265)
Q Consensus       118 ----~e~~~~~~~~~~-~~k~~~E~~~----~~~~~~~~i~r~~~i~g~~~~------------------~~~~~~~~~~  170 (265)
                          ++..+..|.+.| .+|..+|.++    ++.+++++++||+++|||+..                  ..++..++..
T Consensus       167 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  246 (393)
T d1i24a_         167 GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQ  246 (393)
T ss_dssp             TEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHH
T ss_pred             ccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHH
Confidence                111245666666 9999999987    467999999999999998632                  2246677888


Q ss_pred             HHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEe-cCCCccCHHHHHHHHHHHhC
Q 024575          171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKVTG  235 (265)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i-~~~~~~s~~el~~~i~~~~g  235 (265)
                      ...++++.+++++.+.++|+|++|+++++..+++++...++.+.+ .+++.+|+.|+++++.+..+
T Consensus       247 ~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~  312 (393)
T d1i24a_         247 AAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS  312 (393)
T ss_dssp             HHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred             hhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence            888999999999999999999999999999999887665543333 35577999999999988864

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=4.5e-30  Score=209.08  Aligned_cols=235  Identities=16%  Similarity=0.108  Sum_probs=176.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||||++|++.|+++||+|++++|..+.. ...+..............++++.+|+.+.+.+.+.++..++|+|||+
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~   86 (339)
T d1n7ha_           7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL   86 (339)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence            79999999999999999999999999975431 11111111100011135688999999999999999987789999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-------CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhH
Q 024575           80 NGRE----------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (265)
Q Consensus        80 a~~~----------------~~~~~~l~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (265)
                      |+..                ..++.+++++++       ...++++.||..+++.. ..+.+|+.+..|.+.| .+|..+
T Consensus        87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~sK~~~  165 (339)
T d1n7ha_          87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAA  165 (339)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhhHHHHHH
Confidence            9873                223556666654       34567888888777554 3567888888998887 999999


Q ss_pred             HHHH----hhcCCceeEeecceeeCCCCCCchhHH-----HHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEW-----FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       136 E~~~----~~~~~~~~i~r~~~i~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      |.++    +..+++++++||+++|||+........     +.............+++.+.++++|++|+++++..+++++
T Consensus       166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            9986    457899999999999999754333222     2222333344455688899999999999999999999987


Q ss_pred             cccCceEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          207 KASRQVFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      ..  ..++++.+...+..++++.+.+.+|...
T Consensus       246 ~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         246 KP--DDYVVATEEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             SC--CEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             CC--Cccccccccccccchhhhhhhhhhhccc
Confidence            64  4667777788999999999999999875

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.1e-30  Score=208.21  Aligned_cols=248  Identities=18%  Similarity=0.186  Sum_probs=184.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCCh-hHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||||++|+++|+++|++|++++|.............. ..... ...++.++++|++|.+.+.+++...++++++|
T Consensus         8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h   87 (346)
T d1ek6a_           8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence            79999999999999999999999998754442221111111 11111 14679999999999999999998788999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCC-CCCccccc-cchhhHHHH
Q 024575           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESV  138 (265)
Q Consensus        79 ~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~-~~~~~~~~-~~k~~~E~~  138 (265)
                      +|+..                +.++.+++++++  ++++|+++||..+|+........+.. ...+.+.| .+|..+|..
T Consensus        88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            99863                345778899887  88999999999999876554443333 33455555 899999987


Q ss_pred             Hh-----hcCCceeEeecceeeCCCCC-----------CchhHHHHHHHHc-CCcccC------CCCCCceeeeeeHHHH
Q 024575          139 LE-----SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPI------PGSGIQVTQLGHVKDL  195 (265)
Q Consensus       139 ~~-----~~~~~~~i~r~~~i~g~~~~-----------~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~i~~~D~  195 (265)
                      +.     ..+++++++||+++|||...           ..+...++..... +..+.+      ..++.+.++|+|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~  247 (346)
T d1ek6a_         168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (346)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence            64     25899999999999998532           2234444444433 333332      2356778999999999


Q ss_pred             HHHHHHHhcC--ccccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCCcc
Q 024575          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSL  252 (265)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~  252 (265)
                      |.++..++..  ....+++||+++++.+++.|+++.+.+.+|.+.    ++...+..+.
T Consensus       248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~----~~~~~~~~~~  302 (346)
T d1ek6a_         248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI----PYKVVARREG  302 (346)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC----CEEEECCCTT
T ss_pred             cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCC----CeEECCCCCC
Confidence            9999887543  233467999999999999999999999999987    6666665543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=9.1e-31  Score=207.77  Aligned_cols=217  Identities=18%  Similarity=0.178  Sum_probs=183.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|.++||+|++++|+.                          +|+.|.+++.++++..++|+|||++
T Consensus         7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            79999999999999999999999998752                          3788999999999877899999999


Q ss_pred             CCCcc----------------chHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~~~----------------~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      +....                ....+.+.+. ....++++||..+|+.....+..|.++..|...| ..|...|+++++.
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            87421                2233444444 6678999999999998888888999888888877 9999999999999


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecCCCccC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (265)
                      +.+++++||+++|||+  .++...++.....++.+...+  ++.+++++++|+++++..++++...  +.||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDG--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSS--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC--EEEECCCBSCEE
T ss_pred             CCCccccceeEEeCCC--cccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc--CceeEeCCCccc
Confidence            9999999999999996  356677788887887766654  4889999999999999999988653  599999999999


Q ss_pred             HHHHHHHHHHHhCCCccccccceeeCCCccc
Q 024575          223 FDGLARACAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       223 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      +.|+++.+.+.+|.+.    ++.+++..++.
T Consensus       215 ~~e~~~~i~~~~g~~~----~i~~i~~~~~~  241 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDV----KVTPCTTEEFP  241 (281)
T ss_dssp             HHHHHHHHHHHHCCCC----EEEEECSTTSC
T ss_pred             hHHHHHHHHHHhCCCc----eEEeccHHHcC
Confidence            9999999999999998    77777765543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.5e-30  Score=206.16  Aligned_cols=221  Identities=20%  Similarity=0.270  Sum_probs=175.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++|+.|+++.+..                         .+|+.+.+.+.++++..++|.|+|++
T Consensus         8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           8 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence            79999999999999999999988765432                         13788999999999877899999998


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCC-----ccccc-cchhhH
Q 024575           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-----PKSRH-KGKLNT  135 (265)
Q Consensus        81 ~~~-----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~-----~~~~~-~~k~~~  135 (265)
                      +..                 +.++.+++++|+  ++++|||+||.++||.....+.+|+.+..     +.+.| .+|..+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            652                 345778899986  88999999999999988777777765432     23335 999999


Q ss_pred             HHHHh----hcCCceeEeecceeeCCCCCC-----chh-----HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          136 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       136 E~~~~----~~~~~~~i~r~~~i~g~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      |++++    +.+++++++||+++|||++..     .+.     .........+..+..++++.+.++++|++|++.++..
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99874    568999999999999997531     222     2233444556777778888999999999999999999


Q ss_pred             HhcCcc--------ccCceEEecCCCccCHHHHHHHHHHHhCCCccccccceeeCCC
Q 024575          202 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPK  250 (265)
Q Consensus       202 ~~~~~~--------~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  250 (265)
                      +++...        .....++++.+...+..++++.+.+.+|.+.    .+...+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~----~i~~~~~~  275 (315)
T d1e6ua_         223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG----RVVFDASK  275 (315)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS----EEEEETTS
T ss_pred             hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCc----ceEECCCC
Confidence            886542        2345899999999999999999999999987    66655543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.97  E-value=4.3e-29  Score=206.57  Aligned_cols=247  Identities=20%  Similarity=0.243  Sum_probs=180.0

Q ss_pred             CCccccchHHHHHHHHH-cCCeEEEEEcCCCccccCCCCCChhHH------------hhhhccceEEEecCCChHHHHHH
Q 024575            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEF------------AEFSSKILHLKGDRKDYDFVKSS   67 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~D~~~~~~~~~~   67 (265)
                      ||||||||++|+++|++ .||+|+++++-................            ......+.++.+|++|.+.+.++
T Consensus         8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (383)
T d1gy8a_           8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (383)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence            79999999999999997 589999997522211000000000000            00124688999999999999999


Q ss_pred             hhcc-CccEEEEcCCCC----------------ccchHHHHHhCC--CCCcEEEEecceeeecCC-------CCCCCCCC
Q 024575           68 LSAK-GFDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (265)
Q Consensus        68 ~~~~-~~d~vi~~a~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~-------~~~~~e~~  121 (265)
                      ++.. ++|+|||+|+..                ..++.+++++++  ++++++++|+..+|+...       ..+..|+.
T Consensus        88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~  167 (383)
T d1gy8a_          88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (383)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence            8754 569999999863                335778888877  889999999999987543       34566777


Q ss_pred             CCCccccc-cchhhHHHHHh----hcCCceeEeecceeeCCCCCC----------chhHHHHHHHH--------------
Q 024575          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK--------------  172 (265)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~----~~~~~~~i~r~~~i~g~~~~~----------~~~~~~~~~~~--------------  172 (265)
                      +..|.+.| .+|...|.+++    ..+++++++||+++|||+...          .+++.++..+.              
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~  247 (383)
T d1gy8a_         168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (383)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence            77888877 99999999884    468999999999999997532          22333333322              


Q ss_pred             --cCCcccCC------CCCCceeeeeeHHHHHHHHHHHhcC--------ccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          173 --AGRPIPIP------GSGIQVTQLGHVKDLARAFVQVLGN--------EKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       173 --~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~~~--------~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                        .+..+.++      +++.+.++|+|++|++++++.+++.        ....+++||+++++.+++.|+++++.+.+|.
T Consensus       248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence              12222222      3577889999999999999998853        1234579999999999999999999999998


Q ss_pred             CccccccceeeCCCc
Q 024575          237 LDFRSLNLCTTTPKS  251 (265)
Q Consensus       237 ~~~~~~~~~~~~~~~  251 (265)
                      +.    ++...+...
T Consensus       328 ~~----~~~~~~~~~  338 (383)
T d1gy8a_         328 PI----PVRECGRRE  338 (383)
T ss_dssp             CC----CEEEECCCT
T ss_pred             CC----ceEECCCCC
Confidence            87    666665443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.96  E-value=3.2e-28  Score=197.85  Aligned_cols=242  Identities=19%  Similarity=0.265  Sum_probs=176.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++|++|+++++-.......     .........+++++.+|+.+.+.+.++++..++|+|||+|
T Consensus         6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~-----~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD-----NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh-----HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            79999999999999999999999987533221100     0001111368999999999999999999877789999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEecceeee-cCCCCC----------------CCCCCCCCc
Q 024575           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYL-KSDLLP----------------HCETDTVDP  125 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~-~~~~~~----------------~~e~~~~~~  125 (265)
                      +..                +.++.+++++++  +++++++.||..+++ .....+                ..+..+..|
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            862                446788999877  666666666655443 322211                122233345


Q ss_pred             cccc-cchhhHHHHH----hhcCCceeEeecceeeCCCCC----CchhHHHHHHHH-----cCCcccCCCCCCceeeeee
Q 024575          126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~----~~~~~~~~i~r~~~i~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~  191 (265)
                      .+.| .+|...|.++    +..++...++|+..+|++...    ......++..+.     .++++.+++++.+.++++|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            5555 7788888775    457899999999999986532    234455555443     2567888899999999999


Q ss_pred             HHHHHHHHHHHhcCcc-ccCceEEecC--CCccCHHHHHHHHHHHhCCCccccccceeeCCCc
Q 024575          192 VKDLARAFVQVLGNEK-ASRQVFNISG--EKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~-~~~~~~~i~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  251 (265)
                      ++|++++++.+++++. ..++.|++..  +..+++.|+++.+.+.+|.+.    ++...+...
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~----~~~~~~~~~  299 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM----RFTNLPVRE  299 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC----CEEEECCCS
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCc----eeEeCCCCC
Confidence            9999999999998754 4577899854  466899999999999999887    666666543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=8.3e-29  Score=198.99  Aligned_cols=233  Identities=12%  Similarity=0.094  Sum_probs=174.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||+|++++++|+++||+|++++|++.......    ...+.. ...+++++.+|+.|.+.+.+.+.  +++.++++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~   82 (312)
T d1qyda_           9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA   82 (312)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH----HHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhh
Confidence            799999999999999999999999999876521110    011111 13579999999999999999999  99999998


Q ss_pred             CCC-----CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc-ccchhhHHHHHhhcCCceeEeec
Q 024575           80 NGR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRP  151 (265)
Q Consensus        80 a~~-----~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~-~~~k~~~E~~~~~~~~~~~i~r~  151 (265)
                      ++.     +.....++++++.  ...++++.||.+++...      +..+..+... +..+..++.+.+..+++++++||
T Consensus        83 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~  156 (312)
T d1qyda_          83 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS  156 (312)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEEC
T ss_pred             hhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchhhhhhHHHHHHHHhhcccccceEEecc
Confidence            765     3456777777766  67788888887654322      1222333333 37788888888889999999999


Q ss_pred             ceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCce-EEecCCCccCHHHHHHHH
Q 024575          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARAC  230 (265)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~i~~~~~~s~~el~~~i  230 (265)
                      +.+||+.... ....+.......+.+.+++++++.++|++++|+|++++.++.++...++. |++++++.+|+.|+++.+
T Consensus       157 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~  235 (312)
T d1qyda_         157 NMFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIW  235 (312)
T ss_dssp             CEEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHH
T ss_pred             ceeecCCccc-hhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHH
Confidence            9999964211 11111112234556677788999999999999999999999998776665 566677889999999999


Q ss_pred             HHHhCCCccccccceeeCCC
Q 024575          231 AKVTGLLDFRSLNLCTTTPK  250 (265)
Q Consensus       231 ~~~~g~~~~~~~~~~~~~~~  250 (265)
                      ++.+|.+.    ++.+++..
T Consensus       236 ~~~~g~~~----~~~~i~~~  251 (312)
T d1qyda_         236 ERLSEQNL----DKIYISSQ  251 (312)
T ss_dssp             HHHHTCCC----EECCBCSH
T ss_pred             HHHHCCCC----eEEECCHH
Confidence            99999998    66666654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.7e-28  Score=182.33  Aligned_cols=184  Identities=16%  Similarity=0.209  Sum_probs=145.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||||++|++++++|+++||+|++++|++++.....           ..+++++.+|++|.+++.++++  ++|+|||++
T Consensus         9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~   75 (205)
T d1hdoa_           9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (205)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----------ccccccccccccchhhHHHHhc--CCCEEEEEe
Confidence            699999999999999999999999999987743322           2689999999999999999999  999999998


Q ss_pred             CCCc---------cchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEe
Q 024575           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (265)
Q Consensus        81 ~~~~---------~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~  149 (265)
                      |...         .++++++++++  +++|||++||.+++++....      +.....++..|..+|+++++.+++|+++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------~~~~~~~~~~~~~~e~~l~~~~~~~tii  149 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PPRLQAVTDDHIRMHKVLRESGLKYVAV  149 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CGGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------cccccccchHHHHHHHHHHhcCCceEEE
Confidence            8642         24678999988  89999999999887543221      1111123477888999999999999999


Q ss_pred             ecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecC
Q 024575          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (265)
Q Consensus       150 r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (265)
                      ||+.+++....              ....+..++.....+++.+|+|++++.+++++...|+.+.+..
T Consensus       150 rp~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         150 MPPHIGDQPLT--------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CCSEEECCCCC--------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ecceecCCCCc--------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            99999875321              1122234455677899999999999999999887787776654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.95  E-value=2.8e-28  Score=198.61  Aligned_cols=229  Identities=14%  Similarity=0.068  Sum_probs=166.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|+++|+++|++|++++|+..+.. .+.+  .............+.+|+.+.+.+.+++.  ++|.|+|++
T Consensus        17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~-~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a   91 (342)
T d1y1pa1          17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQK--RWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA   91 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHH--HHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHH-HHHH--hhhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence            799999999999999999999999999764421 1100  00000001234557799999999999998  999999998


Q ss_pred             CCC-------------ccchHHHHHhCC---CCCcEEEEecceeeecCC----CCC----------------CCCCCCCC
Q 024575           81 GRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLP----------------HCETDTVD  124 (265)
Q Consensus        81 ~~~-------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~~~----~~~----------------~~e~~~~~  124 (265)
                      +..             +.++.+++++|.   ++++|||+||..+++...    ...                ..+..+..
T Consensus        92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            873             345788898864   689999999976543211    111                12333444


Q ss_pred             ccccc-cchhhHHHHH----hh--cCCceeEeecceeeCCCC----CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          125 PKSRH-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~----~~--~~~~~~i~r~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                      |.+.| .+|..+|+++    ++  .+++++++||+++|||..    .......++..+..++.... ..+.+.++++|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCCccceeeeeHH
Confidence            55555 9999999865    33  357889999999999852    33456667777777764433 2345668999999


Q ss_pred             HHHHHHHHHhcCccccCceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      |+|++++.+++++...+ .|++++++.+++.|+++++.+.++.
T Consensus       251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p~  292 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYPS  292 (342)
T ss_dssp             HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcCC
Confidence            99999999999877655 5668888999999999999999743

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=1.1e-28  Score=197.60  Aligned_cols=233  Identities=14%  Similarity=0.161  Sum_probs=174.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh-hhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||+|++++++|+++||+|++++|++........   ...... ...+++++.+|+.+.+.+.+.+.  +.+.++|+
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~   83 (307)
T d1qyca_           9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK---AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST   83 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH---HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH---HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeec
Confidence            7999999999999999999999999998766321100   011111 13578999999999999999998  99999999


Q ss_pred             CCC-CccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-cccchhhHHHHHhhcCCceeEeecceee
Q 024575           80 NGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIY  155 (265)
Q Consensus        80 a~~-~~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~~~~k~~~E~~~~~~~~~~~i~r~~~i~  155 (265)
                      ++. +.....++++++.  +++++++.|+.....       ++.....+.. ++..+...+.++++.+++++++||+++|
T Consensus        84 ~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~  156 (307)
T d1qyca_          84 VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA  156 (307)
T ss_dssp             CCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred             ccccccchhhHHHHHHHHhccccceeeecccccc-------ccccccccccccccccccccchhhccCCCceecccceec
Confidence            875 4456678888866  788899888765431       1111222222 2366778888888999999999999999


Q ss_pred             CCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCce-EEecCCCccCHHHHHHHHHHHh
Q 024575          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVT  234 (265)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~i~~~~~~s~~el~~~i~~~~  234 (265)
                      |++...  +..+.....++.....++++++.+++++++|+|++++.+++++...++. |++++++.+|+.|+++.+.+.+
T Consensus       157 g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~  234 (307)
T d1qyca_         157 GYFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI  234 (307)
T ss_dssp             HHHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT
T ss_pred             CCCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHH
Confidence            975321  1122223344555666788899999999999999999999988766654 5667788999999999999999


Q ss_pred             CCCccccccceeeCCCc
Q 024575          235 GLLDFRSLNLCTTTPKS  251 (265)
Q Consensus       235 g~~~~~~~~~~~~~~~~  251 (265)
                      |.+.    +++.++..+
T Consensus       235 G~~~----~~~~~~~~~  247 (307)
T d1qyca_         235 DKTL----EKAYVPEEE  247 (307)
T ss_dssp             TSCC----EEEEECHHH
T ss_pred             CCCC----cEEECCHHH
Confidence            9988    777776543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.94  E-value=1.4e-26  Score=189.48  Aligned_cols=231  Identities=15%  Similarity=0.175  Sum_probs=173.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||||++|++.|+++|++|++++|+..+....+      .......+++++.+|++|++.+.++++...+|+|+|++
T Consensus        14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~------~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_          14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHH------hhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            799999999999999999999999999877633211      11111368999999999999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC---CCCcEEEEecceeeec-CCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~---~~~~~v~~Ss~~~~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      +..                +.++.+++++++   ..+.+++.|+..++.. ....+..++.+..|.+.| .+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            863                335778888876   4455555555555443 334455666666777766 7888887665


Q ss_pred             h-------------hcCCceeEeecceeeCCCCC--CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       140 ~-------------~~~~~~~i~r~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      +             ..++.++++||+++|||++.  ..++..++.....+..+ .++.+.+.++++|++|++.++..++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccchhhhhhh
Confidence            2             35789999999999999853  45666777776655554 46788899999999999999998886


Q ss_pred             Ccccc----Cc--eEEecCCCccCHHHHHHHHHHHhCCCc
Q 024575          205 NEKAS----RQ--VFNISGEKYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       205 ~~~~~----~~--~~~i~~~~~~s~~el~~~i~~~~g~~~  238 (265)
                      .+...    +.  .+....+..++..++++.+.+.++...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  286 (356)
T d1rkxa_         247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA  286 (356)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred             hhcccccccccccccccccccccccchhhhhhHHHhCCCc
Confidence            54322    22  233334567899999999999999876

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7e-26  Score=174.34  Aligned_cols=186  Identities=18%  Similarity=0.179  Sum_probs=141.4

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||+|++++++|+++|+  +|++++|++.......           ...++...+|+.+.+++.+.++  ++|++||
T Consensus        20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~   86 (232)
T d2bkaa1          20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   86 (232)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence            79999999999999999984  8999999876532211           3678888999999999999998  9999999


Q ss_pred             cCCCC-------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcC
Q 024575           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (265)
Q Consensus        79 ~a~~~-------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~  143 (265)
                      +++..             ...+.+++++|+  ++++||++||..+++..            +..|..+|..+|+.+++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~------------~~~Y~~~K~~~E~~l~~~~  154 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------------NFLYLQVKGEVEAKVEELK  154 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHHHHHHHHHHTTC
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCc------------cchhHHHHHHhhhcccccc
Confidence            99863             334677888876  88999999998875221            1223499999999999888


Q ss_pred             C-ceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccccCceEEecC
Q 024575          144 V-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (265)
Q Consensus       144 ~-~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (265)
                      + +++|+||+.+||++...+....+.......     ..........|+++|+|++++.++.++.. ++.+.+.+
T Consensus       155 ~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         155 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGS-----LPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             CSEEEEEECCEEECTTGGGSHHHHHHHHHHCS-----CCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             ccceEEecCceeecCCCcCcHHHHHHHHHhhc-----cCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            7 499999999999976555444444444322     12233345679999999999998877764 44555544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.93  E-value=2.1e-25  Score=177.80  Aligned_cols=211  Identities=18%  Similarity=0.163  Sum_probs=166.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      ||||||+|++|++.|.+.|+. +.+.++...                      +.+|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           6 FGKTGQVGWELQRSLAPVGNL-IALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             ECTTSHHHHHHHHHTTTTSEE-EEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCE-EEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            799999999999999998864 445544322                      246899999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhhc
Q 024575           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (265)
Q Consensus        81 ~~~----------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (265)
                      |..                ...+.+++++++ ...+++++||..+|+.....|.+|+.+..|.+.| .+|..+|.+++..
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            863                234677888887 6678999999999998888899999999998877 9999999999887


Q ss_pred             CCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcC---ccccCceEEecCCC
Q 024575          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (265)
Q Consensus       143 ~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~~i~~~~  219 (265)
                      ..+..++|++..++... ......+...+.....+...  +....+++++.|+++++..+++.   ....+++||+++++
T Consensus       143 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKG-NNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSS-CCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             hcccccccccceeeccC-Cccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            77788888877765432 23344555666666665544  34778999999999999888752   23346799999999


Q ss_pred             ccCHHHHHHHHHHHhCCC
Q 024575          220 YVTFDGLARACAKVTGLL  237 (265)
Q Consensus       220 ~~s~~el~~~i~~~~g~~  237 (265)
                      .++..++++.+.+..+..
T Consensus       220 ~~~~~~~~~~i~~~~~~~  237 (298)
T d1n2sa_         220 TTTWHDYAALVFDEARKA  237 (298)
T ss_dssp             CEEHHHHHHHHHHHHHHH
T ss_pred             ceecHHHHHHHHhhhhcc
Confidence            999999999888776543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.4e-24  Score=173.65  Aligned_cols=221  Identities=17%  Similarity=0.152  Sum_probs=145.4

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHH-HHHhh---ccCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLS---AKGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~---~~~~d~   75 (265)
                      ||||||||++|+++|+++|+ +|+++++-......             ....+...+|..+.+.+ ...+.   ...++.
T Consensus         5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------------VNLVDLNIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------------HHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-------------hcccccchhhhccchHHHHHHhhhhcccchhh
Confidence            79999999999999999995 78888643332100             00111122233333322 22221   126899


Q ss_pred             EEEcCCCC--------------ccchHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHH
Q 024575           76 VYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (265)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (265)
                      |+|+|+..              ...+.+++++++ ...++++.||..+++........++....|.+.| .+|..+|.++
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence            99998753              224556777766 3446777777777776666566666666677766 9999999887


Q ss_pred             h----hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcc-cCCCCCCceeeeeeHHHHHHHHHHHhcCcccc
Q 024575          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (265)
Q Consensus       140 ~----~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (265)
                      +    +.+++++++||+++|||+..     ..+...+...+..++.. ...+++...++++|++|++.++..+++++.  
T Consensus       152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--  229 (307)
T d1eq2a_         152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (307)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence            4    56899999999999999742     23445566666666543 345777888999999999999999998764  


Q ss_pred             CceEEecCCCccCHHHHHHHHHHHhCC
Q 024575          210 RQVFNISGEKYVTFDGLARACAKVTGL  236 (265)
Q Consensus       210 ~~~~~i~~~~~~s~~el~~~i~~~~g~  236 (265)
                      .+.|++++++..|+.|+++++.+..+.
T Consensus       230 ~~~~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         230 SGIFNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC------
T ss_pred             ccccccccccchhHHHHHHHHHHhcCC
Confidence            469999999999999999999887664

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=2.2e-24  Score=175.98  Aligned_cols=230  Identities=12%  Similarity=0.047  Sum_probs=165.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH-HHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~d~vi~~   79 (265)
                      ||||||+|++++++|+++||+|++++|++++....        ......+++++++|+.|.. .+..++.  ++|.+++.
T Consensus         9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--------~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~   78 (350)
T d1xgka_           9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--------ELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN   78 (350)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--------HHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--------hhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEee
Confidence            79999999999999999999999999987763210        0111368999999999865 4677887  89998877


Q ss_pred             CCCC----ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchhhHHHHHhhcCCceeEeecce
Q 024575           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVY  153 (265)
Q Consensus        80 a~~~----~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i~r~~~  153 (265)
                      ....    .....++++++.  +++++++.||........        ......+..+|...|.++++.+++++++|++.
T Consensus        79 ~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~--------~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~  150 (350)
T d1xgka_          79 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG--------PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI  150 (350)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS--------SCCCCTTTHHHHHHHHHHHTSSSCEEEEEECE
T ss_pred             cccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC--------cccchhhhhhHHHHHHHHHhhccCceeeeece
Confidence            5432    345788999977  888889888866432211        11122344788999999999999999999999


Q ss_pred             eeCCCCCCchhHHHHHHHHcCC-cccCCCCCCceeeeeeH-HHHHHHHHHHhcCc--cccCceEEecCCCccCHHHHHHH
Q 024575          154 IYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARA  229 (265)
Q Consensus       154 i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~el~~~  229 (265)
                      +++.................+. ....+.+++..++++++ +|+++++..++.++  ...|+.|++++ +.+|+.|++++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~  229 (350)
T d1xgka_         151 YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAA  229 (350)
T ss_dssp             EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHH
T ss_pred             eeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHH
Confidence            8875311100000000011121 23445567788899986 79999999998654  23678999987 56999999999


Q ss_pred             HHHHhCCCccccccceeeCCCccc
Q 024575          230 CAKVTGLLDFRSLNLCTTTPKSLT  253 (265)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~~~~~  253 (265)
                      +++++|++.    +++.+|..++.
T Consensus       230 l~~~~G~~v----~~~~vp~~~~~  249 (350)
T d1xgka_         230 FSRALNRRV----TYVQVPKVEIK  249 (350)
T ss_dssp             HHHHHTSCE----EEEECSSCCCC
T ss_pred             HHHHHCCcc----eEEECCHHHHH
Confidence            999999998    88888876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=4.1e-24  Score=165.57  Aligned_cols=205  Identities=16%  Similarity=0.126  Sum_probs=142.2

Q ss_pred             CCccccchHHHHHHHHHcCCe--EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~--V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||+|+++++.|+++|++  |+.++|++.+. ..+           ..+++++.+|+.+.+.+.++++  ++|.|||
T Consensus         9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~-~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKI-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   74 (252)
T ss_dssp             ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH-HHT-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH-Hhc-----------cCCcEEEEeeeccccccccccc--cceeeEE
Confidence            799999999999999999965  66677876542 111           3688999999999999999999  9999999


Q ss_pred             cCCCC-----------------------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        79 ~a~~~-----------------------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +++..                             ..++.+++..+.  ..+++.+.|+...+.....      ....+..
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~~~~~~  148 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LNKLGNG  148 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GGGGGGC
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------ccccccc
Confidence            98752                             123566666655  6778888887665321100      0011111


Q ss_pred             cc-cchhhHHHHHhhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          128 RH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       128 ~~-~~k~~~E~~~~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      .+ ..+...+.+..+.+++++++||+++|||.......      . .+.....   .....+++|++|+|++++.+++++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~------~-~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~  218 (252)
T d2q46a1         149 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVREL------L-VGKDDEL---LQTDTKTVPRADVAEVCIQALLFE  218 (252)
T ss_dssp             CHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCE------E-EESTTGG---GGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             chhhhhhhhhhhhhcccccceeecceEEECCCcchhhh------h-hccCccc---ccCCCCeEEHHHHHHHHHHHhCCc
Confidence            22 44555666667889999999999999986321100      0 1111111   123467999999999999999998


Q ss_pred             cccCceEEecCCC---ccCHHHHHHHHHHHhC
Q 024575          207 KASRQVFNISGEK---YVTFDGLARACAKVTG  235 (265)
Q Consensus       207 ~~~~~~~~i~~~~---~~s~~el~~~i~~~~g  235 (265)
                      ...++.||++++.   ..++.|+.+++.+..+
T Consensus       219 ~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         219 EAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             cccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            8888999998743   3556677776655443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=5e-22  Score=150.58  Aligned_cols=168  Identities=20%  Similarity=0.157  Sum_probs=116.9

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      ||||||+|++++++|+++|+  +|++++|++....               ..   +..+..|..++...+. ..+|.|||
T Consensus         8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~---~~~~~~d~~~~~~~~~-~~~d~vi~   68 (212)
T d2a35a1           8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PR---LDNPVGPLAELLPQLD-GSIDTAFC   68 (212)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TT---EECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------cc---ccccccchhhhhhccc-cchheeee
Confidence            79999999999999999997  6777777654311               12   2334445444444443 27899999


Q ss_pred             cCCCC--------------ccchHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHhh
Q 024575           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (265)
Q Consensus        79 ~a~~~--------------~~~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (265)
                      ++|..              ...+.+++++++  ++++|+++|+.++++.             +.++| .+|..+|+.+++
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~  135 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  135 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             eeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc
Confidence            98763              234667888877  8899999999887532             22344 899999999988


Q ss_pred             cCC-ceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          142 KGV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       142 ~~~-~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      .++ +++|+||+.+||+.....+...+      ...+....  ....++||++|+|++++.+++++..
T Consensus       136 ~~~~~~~I~Rp~~v~G~~~~~~~~~~~------~~~~~~~~--~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGPREEFRLAEIL------AAPIARIL--PGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT------TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             cccccceeeCCcceeCCcccccHHHHH------HHHHhhcc--CCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            887 59999999999997543322111      11111111  1234669999999999999988764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.69  E-value=2.3e-16  Score=120.52  Aligned_cols=183  Identities=19%  Similarity=0.270  Sum_probs=124.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+...                ..++..+++|++|+++++++++.     .++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1          13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCcch----------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            8999999999999999999999999998766                25677899999999988777654     26999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    .+.++..+.  +..++|++||......          ......|.
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~----------~~~~~~Y~  146 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG----------IGNQANYA  146 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------CCHHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC----------CcccHHHH
Confidence            9999997422                    1    223334443  5568999999775311          11112234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       ..+++++.|.||.+..+.. ..+.........+.-++.         -+...+|+|++++++
T Consensus       147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~-~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL  216 (237)
T d1uzma1         147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPAK---------RVGTPAEVAGVVSFL  216 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-HHSCHHHHHHHGGGCTTC---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh-hccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            89998887753       4789999999999876521 001111222222211111         245689999999998


Q ss_pred             hcCcc--ccCceEEecCCC
Q 024575          203 LGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (265)
                      +....  ..|+.+.+.||-
T Consensus       217 ~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         217 ASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCchhcCCcCCeEEECCCC
Confidence            85432  468899998874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.68  E-value=2.7e-16  Score=120.54  Aligned_cols=190  Identities=18%  Similarity=0.193  Sum_probs=129.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-----CccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+...          ..+++.+.+|++|+++++++++..     .+|+
T Consensus        11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_          11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998655221111          246788999999999888776542     6999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||.....                        .+.++..++  +...++.+||....+           .+....|.
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~-----------~~~~~~Y~  149 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-----------NLGQANYA  149 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----------CTTCHHHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC-----------CCCCcchH
Confidence            99999974221                        233444444  455677777654321           11112234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       ..|++++.|.||.+..+... ..............++..         +...+|+|++++++
T Consensus       150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~pl~R---------~~~pedia~~v~fL  219 (242)
T d1ulsa_         150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-KVPEKVREKAIAATPLGR---------AGKPLEVAYAALFL  219 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-SSCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh-cCCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHHH
Confidence            88988887753       46899999999999876432 223333344443333322         33489999999998


Q ss_pred             hcCc--cccCceEEecCCCcc
Q 024575          203 LGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~~  221 (265)
                      +.+.  ...|+.+.+.||..+
T Consensus       220 ~S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         220 LSDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hchhhCCCCCcEEEECCCccC
Confidence            8543  346889999887643

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.67  E-value=2.2e-16  Score=121.23  Aligned_cols=196  Identities=17%  Similarity=0.207  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||++++++|+++|++|++.+++..+..+.+.    ..+.....++.++++|++|+++++++++.     .++|+
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            8999999999999999999999988766544222221    22233345788999999999988877654     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+|+.....                        .+.++..++  +..++|++||...+-.          .+....|.
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~----------~~~~~~Y~  152 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----------NIGQANYA  152 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----------CTTCHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC----------CCCCHHHH
Confidence            99999874221                        333444443  5679999999875411          11112344


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       ..|++++.|.||.+-.+.. ..+............++.         -+...+|+|+++.++
T Consensus       153 asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~---------R~~~p~dvA~~v~fL  222 (244)
T d1edoa_         153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKKILGTIPLG---------RTGQPENVAGLVEFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH-HTTCHHHHHHHHTSCTTC---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH-HHhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            88988887753       4689999999998865421 111222333333332222         234589999999998


Q ss_pred             hcCcc---ccCceEEecCCCc
Q 024575          203 LGNEK---ASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~~---~~~~~~~i~~~~~  220 (265)
                      +.++.   ..|+.+.+.||-.
T Consensus       223 a~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         223 ALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTTT
T ss_pred             HCCchhcCCcCCeEEeCCCee
Confidence            63332   4688999988743

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.67  E-value=2.1e-16  Score=121.84  Aligned_cols=194  Identities=18%  Similarity=0.242  Sum_probs=130.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+.+...+..     .++.....++..+.+|++|++++.++++.     ..+|+
T Consensus        16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            799999999999999999999999999865522111     12222235789999999999988877764     27999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+++....                    +    .+.++..++  +..++|++||...+-..          +....|.
T Consensus        91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----------~~~~~Y~  160 (251)
T d2c07a1          91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------VGQANYS  160 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------TTCHHHH
T ss_pred             eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC----------CCCHHHH
Confidence            9999987321                    1    233344443  56799999997764211          1112234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       ..|++++.|.||.+..+... .............-++..         +...+|+|++++.+
T Consensus       161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~-~~~~~~~~~~~~~~pl~R---------~~~pedvA~~v~fL  230 (251)
T d2c07a1         161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-KISEQIKKNIISNIPAGR---------MGTPEEVANLACFL  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTSS---------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc-ccCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHH
Confidence            88988888753       57899999999999876421 122333334433333322         44589999999998


Q ss_pred             hcCcc--ccCceEEecCCC
Q 024575          203 LGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (265)
                      +....  ..|+.+.+.||-
T Consensus       231 ~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         231 SSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCchhCCCcCcEEEECCCc
Confidence            86533  468899998873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=2.5e-16  Score=121.68  Aligned_cols=195  Identities=13%  Similarity=0.120  Sum_probs=131.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||++++++|+++|++|++.+|+.++..+..     .++.....++.++++|+++++++.++++.     .++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865522111     12222245788999999999888776654     27999


Q ss_pred             EEEcCCCCcc-------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD-------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~-------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||....                   +    .+.++..+.  +..++|++||...+.           +......| 
T Consensus        92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~-----------~~~~~~~Y~  160 (255)
T d1fmca_          92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCHHHH
T ss_pred             eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc-----------cccccccch
Confidence            9999987422                   1    222333333  556889999876531           11112234 


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       .+|++++.|.||.+..+.....+.........+.-++..         +...+|+|++++.+
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R---------~g~pedvA~~v~fL  231 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRR---------LGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCS---------CBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHH
Confidence            88988887753       468999999999987653111122233333333333322         34589999999998


Q ss_pred             hcCc--cccCceEEecCCCc
Q 024575          203 LGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (265)
                      +...  ...|+.+.+.||..
T Consensus       232 ~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         232 CSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             hCchhcCCcCCEEEECcCcc
Confidence            8643  34688999998863

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=3.2e-16  Score=120.16  Aligned_cols=192  Identities=16%  Similarity=0.186  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+ +       ..++..+...+.+|++++++++++++.     .++|+
T Consensus        10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~-~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_          10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQA-I-------SDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H-------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H-------HHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            8999999999999999999999999998655211 1       122245788899999999888777654     26999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+|+.....                        .+.++..+.  +..++|++||...+...          +....|.
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----------~~~~~Y~  151 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN----------GGQANYA  151 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------TTCHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC----------CCCHHHH
Confidence            99999874221                        233444443  56789999997754211          1112234


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       .+|++++.|.||.+-.+... .+.........+..++.         -+...+|+|++++++
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL  221 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR-ALSDDQRAGILAQVPAG---------RLGGAQEIANAVAFL  221 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-TSCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh-hhhhhHHHHHHhcCCCC---------CCCCHHHHHHHHHHH
Confidence            89998887753       57899999999988654210 11112222222222221         244589999999999


Q ss_pred             hcCcc--ccCceEEecCCCc
Q 024575          203 LGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~  220 (265)
                      +.+..  ..|+.+.+.||-.
T Consensus       222 ~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         222 ASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             HSGGGTTCCSCEEEESTTSS
T ss_pred             hCchhcCCcCCeEEECCCeE
Confidence            86433  4688999988753

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.66  E-value=4.2e-16  Score=120.15  Aligned_cols=193  Identities=15%  Similarity=0.080  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||++++++|+++|++|++.+|+.++..+.        ..++..++.++++|++++++++++++.     ..+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_          11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT--------ARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            79999999999999999999999999987653221        122246789999999999988877754     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||.....                        .+.++..++  +..++|++||...+..          .+....|.
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~----------~~~~~~Y~  152 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG----------LALTSSYG  152 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTCHHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc----------ccchhhHH
Confidence            99999874221                        233344444  5679999999875311          11112334


Q ss_pred             cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.       ...++++..|.||.+..+         +.........-.........+-.+..+|+|++++.+
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~---------~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL  223 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP---------MTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH---------HHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc---------cchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHH
Confidence            8898888775       356899999999988654         112211111101100000011123579999999998


Q ss_pred             hcCc--cccCceEEecCCCc
Q 024575          203 LGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (265)
                      +.+.  ...|+.+.+.||..
T Consensus       224 ~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         224 LSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hchhhCCCCCceEEeCCCcc
Confidence            8543  24688999998754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.66  E-value=9e-16  Score=117.99  Aligned_cols=194  Identities=15%  Similarity=0.167  Sum_probs=124.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|++.+...       ..+.....++..+.+|++|+++++++++.     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-------~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1          11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-------AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH-------HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211       22233346789999999999988877653     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||.....                        .+.++..++  +..++|++||......          .+....|.
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------~~~~~~Y~  153 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK----------IEAYTHYI  153 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC----------CSSCHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc----------Ccccccch
Confidence            99999974221                        233444444  5678999999775311          11112233


Q ss_pred             cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.       ...|++++.|.||.+..+............... ....       ...-+...+|+|++++.+
T Consensus       154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~~-------~l~r~~~pedvA~~v~fL  225 (247)
T d2ew8a1         154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NMLQ-------AIPRLQVPLDLTGAAAFL  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTS-------SSCSCCCTHHHHHHHHHH
T ss_pred             hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH-HHhc-------cCCCCCCHHHHHHHHHHH
Confidence            8898888765       356899999999998766421111111111100 0000       111244579999999998


Q ss_pred             hcCcc--ccCceEEecCCC
Q 024575          203 LGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (265)
                      +....  ..|+.+.+.||.
T Consensus       226 ~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         226 ASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             TSGGGTTCCSCEEEESSSC
T ss_pred             hCchhcCCcCCeEEECCCE
Confidence            86432  468899998874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.65  E-value=7.4e-16  Score=119.33  Aligned_cols=198  Identities=16%  Similarity=0.135  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||++++++|+++|++|++.+|+.++..+.+.    ..+.....++..+++|++|++++.++++.     .++|+
T Consensus        13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999998654222111    12222235788999999999988877754     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||.....                        ++.++..+.  + ...+|++||......          .+....|
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~----------~~~~~~Y  158 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP----------WPLFVHY  158 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----------CTTCHHH
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc----------Ccccccc
Confidence            99999874221                        233344443  3 345888998764210          1111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ..+|..++.+.+       ..+++++.|.||.+..|....... ........+..++.         -+...+|+|++++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~  229 (261)
T d1geea_         159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YIGEPEEIAAVAA  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHHHH
T ss_pred             ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence            388988887753       578999999999987663111110 11122222222222         2345899999999


Q ss_pred             HHhcCcc--ccCceEEecCCCcc
Q 024575          201 QVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      .++....  ..|+.+.+.||..+
T Consensus       230 fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         230 WLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCCcCCeEEECCCeeC
Confidence            9885433  46889999988654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.65  E-value=1.1e-15  Score=117.01  Aligned_cols=187  Identities=16%  Similarity=0.170  Sum_probs=127.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|++++...        ...++..++.++.+|++|+++++++++.     ..+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_          12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA--------MAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            7999999999999999999999999998765221        1122346788999999999988777654     26999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..          .+....|.
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------~~~~~~Y~  153 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG----------TVACHGYT  153 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTBHHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc----------cccccchh
Confidence            9999997422                    1    222333333  5578999999875311          11112233


Q ss_pred             cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHH
Q 024575          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (265)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (265)
                      .+|..++.+.+       ..|++++.|.||.+..|...         .. ......     ....-+...+|+|++++++
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~---------~~-~~~~~~-----~pl~R~~~p~diA~~v~fL  218 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---------WV-PEDIFQ-----TALGRAAEPVEVSNLVVYL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---------TS-CTTCSC-----CSSSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh---------hh-hHHHHh-----ccccCCCCHHHHHHHHHHH
Confidence            88988887753       57899999999988765310         00 000000     0112356789999999998


Q ss_pred             hcCc--cccCceEEecCCCc
Q 024575          203 LGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (265)
                      +...  ...|+.+.+.||..
T Consensus       219 ~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         219 ASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hChhhCCCcCCEEEECCCee
Confidence            8543  34688999988754

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.65  E-value=9.4e-16  Score=118.12  Aligned_cols=197  Identities=18%  Similarity=0.193  Sum_probs=130.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|++.|++|++.+|+.++..+...    ........++..+.+|+++++++.++++.     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_          11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765322111    11112234688899999999988877754     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||.....                        ++.++..++  +..++|++||.....          .+......|
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~----------~~~~~~~~Y  156 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------VTMPNISAY  156 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC----------CCSSSCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc----------ccCccccch
Confidence            99999974221                        334455554  556899998865310          011112234


Q ss_pred             -cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                       .+|..++.+.+       ..|+++..|.||.+-.+...... .........+.-++..         +...+|+|++++
T Consensus       157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~~pedvA~~v~  227 (251)
T d1vl8a_         157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR---------TGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS---------CBCGGGGHHHHH
T ss_pred             HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCC---------CCCHHHHHHHHH
Confidence             88988887753       57899999999999776421110 0122233333323322         334799999999


Q ss_pred             HHhcCcc--ccCceEEecCCCc
Q 024575          201 QVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      .++....  ..|+.+.+.||..
T Consensus       228 fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCchhCCCcCcEEEeCcCee
Confidence            9886432  4688999988753

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=4.4e-16  Score=119.71  Aligned_cols=191  Identities=14%  Similarity=0.108  Sum_probs=126.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++.. +.         .+ ..+..++++|++|+++++++++.     .++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~---------~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1          11 TGGARGIGRAIAQAFAREGALVALCDLRPEGK-EV---------AE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HH---------HH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HH---------HH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            79999999999999999999999999986541 11         11 23567899999999888777654     27999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                    +    ++.++..++  +..++|++||...+.           +......|
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~-----------~~~~~~~Y  148 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AEQENAAY  148 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BCTTBHHH
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc-----------cccccchh
Confidence            9999997422                    1    223334443  456899999987531           11122334


Q ss_pred             -cchhhHHHHH-------hhcCCceeEeecceeeCCCCCC-----chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                       .+|..++.+.       ...+++++.|.||.+-.|....     ...........+..++         .-+...+|++
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedia  219 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RRLGKPEEVA  219 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence             8899888775       3568999999999886542000     0000001111111111         1245689999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCccC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      ++++.++.+.  ...|+.+.+.||-..+
T Consensus       220 ~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         220 EAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            9999988543  2468899999886543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.3e-16  Score=119.08  Aligned_cols=191  Identities=12%  Similarity=0.127  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+.         ..-..++..+.+|++|++++++++++. ++|++||+
T Consensus        13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_          13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            79999999999999999999999999986552211         111357889999999999999988764 68999999


Q ss_pred             CCCCccc------------------------hHHHHHh-CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           80 NGREADE------------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~-~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      |+.....                        ++.++.. ++  +..++|++||......          .+....|..+|
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----------~~~~~~Y~asK  153 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA----------VTNHSVYCSTK  153 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------CTTBHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc----------ccchhhhhhhH
Confidence            9874221                        2233333 22  4568999998775311          11112233889


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      ...+.+.+       ..+++++.|.||.+..+..... ..........+.-++.         -+...+|+|++++.++.
T Consensus       154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peevA~~v~fL~S  224 (244)
T d1pr9a_         154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG---------KFAEVEHVVNAILFLLS  224 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC---------SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhC
Confidence            88887753       4689999999999876531000 0111222222222221         24558999999999886


Q ss_pred             Cc--cccCceEEecCCC
Q 024575          205 NE--KASRQVFNISGEK  219 (265)
Q Consensus       205 ~~--~~~~~~~~i~~~~  219 (265)
                      +.  ...|+.+.+.||.
T Consensus       225 ~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         225 DRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhCCcCCcEEEECccH
Confidence            43  2468899988864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=6.9e-16  Score=119.44  Aligned_cols=196  Identities=15%  Similarity=0.148  Sum_probs=118.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc------cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   74 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+..     .++.....++..+.+|+++++++.++++.      ..+|
T Consensus        14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            899999999999999999999999999876532211     12222235789999999999887766643      1489


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +    ++.++..++  +..++|++||....-           +......
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~~~~~~~  157 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SASVGSI  157 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-----------ccccccc
Confidence            99999997321                    1    223333444  567899999977531           1111223


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      | .+|..++.+.+       ..|++++.|.||.+..|..................+         ..-+...+|+|++++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedvA~~v~  228 (259)
T d1xq1a_         158 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKP---------LGRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             ccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCC---------CCCCcCHHHHHHHHH
Confidence            4 88988887653       578999999999987663211111111111111111         122456899999999


Q ss_pred             HHhcCc--cccCceEEecCCCcc
Q 024575          201 QVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      .++...  ...|+.+.+.||..+
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHhCchhcCCcCcEEEeCCCEEC
Confidence            988543  346889999887543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.7e-16  Score=118.41  Aligned_cols=193  Identities=18%  Similarity=0.179  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...         .+.+...++.++.+|++|+++++++++.     .++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1          12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGR---------ALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------HHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865521         1111135788999999999988877764     27999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||+||....                     +    ++.++..++ +..++|++||....-.          .+....|.
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~----------~~~~~~Y~  152 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----------QAQAVPYV  152 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----------CTTCHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc----------ccCcchhH
Confidence            9999985311                     1    223333444 3468999999876421          11112344


Q ss_pred             cchhhHHHHH-------hhcCCceeEeecceeeCCCC-----CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      .+|..++.+.       ...+++++.|.||.+..|..     ........+.......++.         -+...+|+|+
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~p~eva~  223 (250)
T d1ydea1         153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG---------RMGQPAEVGA  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS---------SCBCHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC---------CCCCHHHHHH
Confidence            8898888775       35789999999999865420     0000111222222222222         2445899999


Q ss_pred             HHHHHhcC-ccccCceEEecCCCcc
Q 024575          198 AFVQVLGN-EKASRQVFNISGEKYV  221 (265)
Q Consensus       198 ~~~~~~~~-~~~~~~~~~i~~~~~~  221 (265)
                      ++++++.+ ....|+.+.+.||..+
T Consensus       224 ~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         224 AAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHHHHhCccCCCcCCeEEECCCccc
Confidence            99988743 2346889999887654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.63  E-value=5.4e-16  Score=119.52  Aligned_cols=194  Identities=19%  Similarity=0.186  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++......     ..+ ....++.++.+|++|++++.++++.     .++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1          12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSV-GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHh-CCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            899999999999999999999999999865521111     011 1135789999999999988777654     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC--C-CCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||.....                        .+.++..++  + ..++|++||...+-.          .+....|
T Consensus        86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~----------~~~~~~Y  155 (251)
T d1zk4a1          86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG----------DPSLGAY  155 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC----------CTTCHHH
T ss_pred             EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc----------CCCchhH
Confidence            99999874221                        233344444  3 347899998765311          1111223


Q ss_pred             ccchhhHHHHH---------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 HKGKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~~~k~~~E~~~---------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      ..+|..++.+.         ...|++++.|.||.+..+...............  ...+       ..-+...+|+|+++
T Consensus       156 ~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~--~~~p-------l~R~~~pedvA~~v  226 (251)
T d1zk4a1         156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQR--TKTP-------MGHIGEPNDIAYIC  226 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTST--TTCT-------TSSCBCHHHHHHHH
T ss_pred             HHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHH--hCCC-------CCCCcCHHHHHHHH
Confidence            38887776553         245799999999998665210100111111100  0111       11255689999999


Q ss_pred             HHHhcCcc--ccCceEEecCCC
Q 024575          200 VQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      ++++....  ..|+.+.+.||.
T Consensus       227 ~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         227 VYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCcEEEECccc
Confidence            99886433  468899998874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=3.8e-16  Score=119.66  Aligned_cols=191  Identities=15%  Similarity=0.157  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhcc-CccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+.         ..-..++..+.+|++|++++++++++. ++|++||+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_          11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL---------AKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            79999999999999999999999999986552211         111357889999999999999988864 58999999


Q ss_pred             CCCCccc------------------------hHHHHHh-CC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccch
Q 024575           80 NGREADE------------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~-~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k  132 (265)
                      ||.....                        .+.++.. ++  ...++|++||...+..          .+....|..+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------~~~~~~Y~asK  151 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT----------FPNLITYSSTK  151 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------CTTBHHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc----------CCccccccchH
Confidence            9974221                        1222322 22  3468999998765311          11112234889


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCCC-chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhc
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (265)
                      ..++.+.+       ..|++++.|.||.+..+.... ...........+..++.         -+...+|+|++++.++.
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peeva~~v~fL~S  222 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR---------KFAEVEDVVNSILFLLS  222 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS---------SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhC
Confidence            88888753       468999999999886542000 00011222222222221         23458999999999885


Q ss_pred             Cc--cccCceEEecCCC
Q 024575          205 NE--KASRQVFNISGEK  219 (265)
Q Consensus       205 ~~--~~~~~~~~i~~~~  219 (265)
                      +.  ...|+.+.+.||.
T Consensus       223 ~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         223 DRSASTSGGGILVDAGY  239 (242)
T ss_dssp             GGGTTCCSSEEEESTTG
T ss_pred             chhcCcCCceEEeCcch
Confidence            43  3468899998874

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.62  E-value=2.4e-15  Score=116.42  Aligned_cols=196  Identities=15%  Similarity=0.112  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----c--Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~--~~d   74 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+..     .++.....++..+.+|++|++++.++++.    .  .+|
T Consensus        14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            799999999999999999999999999866532211     22222245788899999999888766543    2  489


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||....                    +    ++.++..++  +..++|++||......          .+....|
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------~~~~~~Y  158 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA----------VPYEAVY  158 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC----------CTTCHHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc----------cccccch
Confidence            99999997422                    1    222333333  4568999999765311          1111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCC----CCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (265)
                      ..+|..++.+.+       ..+++++.|.||.+..+..    ........+......-++..         +...+|+|+
T Consensus       159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R---------~g~pedvA~  229 (259)
T d2ae2a_         159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRR---------MGEPKELAA  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCS---------CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCC---------CcCHHHHHH
Confidence            389988887753       4689999999999866521    01111122233333323222         345899999


Q ss_pred             HHHHHhcCcc--ccCceEEecCCCc
Q 024575          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +++.++....  ..|+.+.+.||-.
T Consensus       230 ~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         230 MVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhCCCcCcEEEECCCeE
Confidence            9999886432  4688999988753

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.62  E-value=2e-15  Score=116.64  Aligned_cols=193  Identities=17%  Similarity=0.184  Sum_probs=129.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+.++..+        ...++..++..+.+|+++++++.++++.     ..+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~--------~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_          11 TGSARGIGRAFAEAYVREGARVAIADINLEAARA--------TAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998655221        1223346788999999999988877764     27999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHh-CC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~-~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +.    +.++.. ++  +..++|++||...+-           +......
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~  151 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR-----------GEALVGV  151 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTTCHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc-----------ccccccc
Confidence            9999997422                    11    222322 22  346899999977531           1111233


Q ss_pred             c-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHH-----------HHHHHHcCCcccCCCCCCceeee
Q 024575          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                      | .+|..++.+.+       ..|++++.|.||.+-.|.. ......           ....+...-++         .-+
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~  221 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW-DGVDAKFADYENLPRGEKKRQVGAAVPF---------GRM  221 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH-HHHHHHHHHHHTCCTTHHHHHHHHHSTT---------SSC
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh-hhhhhhhhhhccCChHHHHHHHHhcCCC---------CCC
Confidence            4 88988887753       5689999999998877631 000000           01111111111         124


Q ss_pred             eeHHHHHHHHHHHhcCc--cccCceEEecCCCccC
Q 024575          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      ...+|+|.+++.++...  ...|+.+.+.||..+|
T Consensus       222 ~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         222 GRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             BCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            45899999999987543  2468899999987654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.62  E-value=2e-15  Score=115.62  Aligned_cols=190  Identities=18%  Similarity=0.252  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+..+..+.        ..+...++.++++|++++++++++++.     .++|+
T Consensus        11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1          11 TGAASGIGRAALDLFAREGASLVAVDREERLLAEA--------VAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            79999999999999999999999999987663221        122235788999999999988877764     26999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      +||+|+.....                        .+.++..+++.+.++.+|+.+..            .......| .
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~~~~~~Y~~  150 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GAFGLAHYAA  150 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CHHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------cccCccccch
Confidence            99999864221                        22233334444455555554321            11112234 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHh
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (265)
                      +|...|.+.+       ..++++..|.||.+-.+.. ..+.........+..++..         +...+|+|++++.++
T Consensus       151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-~~~~~~~~~~~~~~~p~~r---------~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-AGLPPWAWEQEVGASPLGR---------AGRPEEVAQAALFLL  220 (241)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-TTSCHHHHHHHHHTSTTCS---------CBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-HhhhHhHHHHHHhCCCCCC---------CcCHHHHHHHHHHHh
Confidence            8999998763       4689999999999866532 1223333444444333322         345899999999998


Q ss_pred             cCc--cccCceEEecCCCc
Q 024575          204 GNE--KASRQVFNISGEKY  220 (265)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~  220 (265)
                      .+.  ...|+.+.+.||..
T Consensus       221 S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         221 SEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             cchhCCCcCceEEeCCCcc
Confidence            643  24688999988764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.61  E-value=2.3e-15  Score=116.37  Aligned_cols=200  Identities=18%  Similarity=0.229  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+ +    ..++.....++..+.+|++|++++.++++.     .++|+
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~----~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA-V----ASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998755221 1    122222345788999999999988877654     27999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                    +    ++.++..+.   ...+++++||...+.           +......
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------cCccccc
Confidence            9999997422                    1    222333322   346799999876531           1112233


Q ss_pred             c-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHc--CCccc----CCCCCCceeeeeeHHH
Q 024575          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIP----IPGSGIQVTQLGHVKD  194 (265)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~i~~~D  194 (265)
                      | .+|...+.+.       ...|++++.|.||.+-.|.     ...+......  .....    .........-+...+|
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pee  225 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-----HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHH
Confidence            4 8898888775       3578999999999886542     2111111100  00000    0000000112456899


Q ss_pred             HHHHHHHHhcCc--cccCceEEecCCCcc
Q 024575          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      +|++++.++...  ...|+.+.+.||-.+
T Consensus       226 vA~~v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         226 VAACVSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence            999999988643  246889999887543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.61  E-value=1.8e-15  Score=117.29  Aligned_cols=204  Identities=14%  Similarity=0.177  Sum_probs=126.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH-hhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||+++++.|+++|++|++.+|++....+.+.    ..+ .....++.++.+|++|+++++++++.     .++|
T Consensus        10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1          10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            8999999999999999999999999998644222111    111 11234788999999999988887764     2699


Q ss_pred             EEEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||.....                        .+.++..++  +..++|++||......          .+....|
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------~~~~~~Y  155 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA----------SANKSAY  155 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTCHHH
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec----------cCCcchh
Confidence            999999974221                        233444444  5579999999875311          1111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHH-HcCCc-c-cCCCCCCceeeeeeHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL-KAGRP-I-PIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..+|..++.+.+       ..|++++.|.||.+-.|.....+ ....... ..... . ..........-+...+|+|++
T Consensus       156 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~  234 (260)
T d1x1ta1         156 VAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI-SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHHH
T ss_pred             hhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh-hhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            388988887753       46899999999998766311110 0000000 00000 0 000000001134568999999


Q ss_pred             HHHHhcCc--cccCceEEecCCC
Q 024575          199 FVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++...  ...|+.+.+.||.
T Consensus       235 v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         235 AVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhChhhCCCcCCEEEECcch
Confidence            99988643  3468899998874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.61  E-value=2.6e-15  Score=116.06  Aligned_cols=196  Identities=17%  Similarity=0.211  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh--hhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||++.||+++++.|+++|++|++.+|+.++.....     ..+..  ...++..+.+|++|+++++++++.     .++
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   84 (258)
T d1iy8a_          10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   84 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999875521111     01111  124678899999999988877654     279


Q ss_pred             cEEEEcCCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcc
Q 024575           74 DVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (265)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~  126 (265)
                      |++||+||....                     +    ++.++..++  +..++|++||...+-           +....
T Consensus        85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~~~~~  153 (258)
T d1iy8a_          85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GIGNQ  153 (258)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BCSSB
T ss_pred             CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc-----------CCCCc
Confidence            999999986311                     1    222333333  567899999977531           11112


Q ss_pred             ccc-cchhhHHHHH-------hhcCCceeEeecceeeCCCCC-------CchhHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          127 SRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNY-------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       127 ~~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                      ..| .+|..++.+.       ...+++++.|.||.+..|...       ............+..++.         -+..
T Consensus       154 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~  224 (258)
T d1iy8a_         154 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK---------RYGE  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC---------SCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC---------CCcC
Confidence            334 8898888765       356899999999998765200       000111111222222221         2455


Q ss_pred             HHHHHHHHHHHhcCc--cccCceEEecCCCcc
Q 024575          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      .+|+|+++++++...  ...|+.+.+.||..-
T Consensus       225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         225 APEIAAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence            899999999988643  346889999988653

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.60  E-value=4.6e-15  Score=114.90  Aligned_cols=194  Identities=12%  Similarity=0.203  Sum_probs=126.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+ .    ...+.....++..+.+|++|+++++++++.     ..+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1          11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEK-A----EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H----HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999999998655211 1    112222235788999999999888877764     27999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||++|....                     +    ++.++..+.  +..++|++||...+..          .+....|
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~----------~~~~~~Y  155 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG----------PPNMAAY  155 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC----------CTTBHHH
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC----------CcchHHH
Confidence            9999986421                     1    222333333  5678999999775411          1111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCC---------------CCchhHHHHHHHHcCCcccCCCCCCce
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---------------YNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (265)
                      ..+|...+.+.+       ..|++++.|.||.+-.+..               .......+...+...-++.        
T Consensus       156 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--------  227 (260)
T d1zema1         156 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR--------  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS--------
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC--------
Confidence            388988887753       5689999999999876520               0000111122222222221        


Q ss_pred             eeeeeHHHHHHHHHHHhcCc--cccCceEEecCC
Q 024575          187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (265)
                       -+...+|+|++++.++...  ...|+.+.+.||
T Consensus       228 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 -RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             2345899999999988643  246788888764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.59  E-value=7.2e-15  Score=113.54  Aligned_cols=196  Identities=13%  Similarity=0.091  Sum_probs=127.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----c--Ccc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~--~~d   74 (265)
                      |||++.||++++++|+++|++|++.+|++.+..+.     ...+......+.++.+|++++++++++++.    .  .+|
T Consensus        12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~-----~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_          12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-----LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            79999999999999999999999999987552211     122233345678899999999887766542    2  489


Q ss_pred             EEEEcCCCCccc--------------------h----HHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREADE--------------------V----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~~--------------------~----~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +++|+++.....                    .    +.++..+.  +..++|++||......          .+....|
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~----------~~~~~~Y  156 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA----------LPSVSLY  156 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC----------CTTCHHH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc----------cccchhH
Confidence            999999874321                    1    22223333  6679999999876311          1111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-----hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ..+|..++.+.+       ..++++..|.||.+..+.....     .............++.         -+...+|+|
T Consensus       157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg---------R~~~pediA  227 (258)
T d1ae1a_         157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG---------RAGKPQEVS  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC---------SCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            388988887753       4689999999999987642111     1122233332222221         245689999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCc
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      .+++.++.+.  ...|+.+.+.+|..
T Consensus       228 ~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         228 ALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCcEEEeCCCee
Confidence            9999998543  34688899988754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=8.6e-16  Score=121.15  Aligned_cols=200  Identities=11%  Similarity=0.152  Sum_probs=125.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHH-hhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||+++++.|+++|++|++.+|+.++......+ ....+ .....++..+.+|++|++++.++++.     .++|
T Consensus        18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~e-l~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   96 (297)
T d1yxma1          18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE-LQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN   96 (297)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeE
Confidence            79999999999999999999999999987652111000 00000 00124688999999999988877653     2799


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+|+....                    +    ++.++..+.  +..++|.+|+....+           .+....|
T Consensus        97 iLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~-----------~~~~~~Y  165 (297)
T d1yxma1          97 FLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-----------FPLAVHS  165 (297)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----------CTTCHHH
T ss_pred             EEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc-----------ccccccc
Confidence            99999987422                    1    223344444  455677776543211           1111223


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCC---chhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      ..+|..++.+.+       ..|++++.|.||.+..+....   .....+.....+.-++         .-+...+|+|.+
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~~  236 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSSV  236 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            388998887753       468999999999987763111   1111111111111111         124458999999


Q ss_pred             HHHHhcCc--cccCceEEecCCCcc
Q 024575          199 FVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      ++.++.+.  -..|+.+.+.||..+
T Consensus       237 v~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         237 VCFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCcCCcEEEeCcChhh
Confidence            99998643  346889999987643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.59  E-value=5.8e-15  Score=114.19  Aligned_cols=195  Identities=22%  Similarity=0.279  Sum_probs=127.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+..     .++.....++..+++|++|+++++++++.     .++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865522111     22223345789999999999988877654     26999


Q ss_pred             EEEcCCCCcc--------------------ch----HHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD--------------------EV----EPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                    +.    +.++..+.    +..++|.+||...+..          .+....
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~----------~~~~~~  152 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG----------VVHAAP  152 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC----------CTTCHH
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc----------cccchh
Confidence            9999997421                    12    22333322    4467999988765311          111122


Q ss_pred             cccchhhHHHHHh-------hcCCceeEeecceeeCCCCC----------CchhHHHHHHHHcCCcccCCCCCCceeeee
Q 024575          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      |..+|..++.+.+       ..+++++.|.||.+-.|...          ............+.-++.         -+.
T Consensus       153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg---------R~~  223 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG---------RYV  223 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---------SCB
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---------CCc
Confidence            4488988887763       46799999999988654200          000111222222222221         245


Q ss_pred             eHHHHHHHHHHHhcCc--cccCceEEecCCC
Q 024575          191 HVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      ..+|+|++++.++...  ...|+.+.+.||-
T Consensus       224 ~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         224 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            5899999999988543  3468899998863

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.7e-16  Score=121.56  Aligned_cols=199  Identities=15%  Similarity=0.169  Sum_probs=128.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||++.||+++++.|+++|++|++++|+.++..+...     .+.+.  ..++.++.+|++++++++++++.     .++
T Consensus         9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (254)
T d2gdza1           9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKA-----ALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998765221110     00000  24688899999999888877653     279


Q ss_pred             cEEEEcCCCCccc----------------hHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-cc
Q 024575           74 DVVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (265)
Q Consensus        74 d~vi~~a~~~~~~----------------~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~  131 (265)
                      |++||+|+.....                .+.++..+.     ...++|++||...+-           +......| .+
T Consensus        84 DilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~as  152 (254)
T d2gdza1          84 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVAQQPVYCAS  152 (254)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTTCHHHHHH
T ss_pred             CeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------CCCCccchHHH
Confidence            9999999985321                223344443     235699999987531           11112234 88


Q ss_pred             hhhHHHHH---------hhcCCceeEeecceeeCCCCCCchh-------HHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          132 KLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVE-------EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       132 k~~~E~~~---------~~~~~~~~i~r~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      |..++.+.         ...+++++.|.||.+-.+.......       ......+.+.-++         .-+...+|+
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedv  223 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY---------YGILDPPLI  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH---------HCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            87766553         3468999999999886541000000       0000000000001         124458999


Q ss_pred             HHHHHHHhcCccccCceEEecCCCccCHH
Q 024575          196 ARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (265)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (265)
                      |++++.++.++...|+.+.+.+|..+.++
T Consensus       224 A~~v~fL~s~~~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         224 ANGLITLIEDDALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             HHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence            99999999877667999999998776554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.58  E-value=1e-14  Score=111.21  Aligned_cols=184  Identities=15%  Similarity=0.189  Sum_probs=122.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (265)
                      |||++.||+++++.|+++|++|++.+|+++...              ..+.+++.+|+++. +.+.+.+.  ++|++||+
T Consensus        10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn   73 (234)
T d1o5ia_          10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN   73 (234)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence            799999999999999999999999999854421              24567789999864 44555555  89999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchh
Q 024575           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~  133 (265)
                      ||.....                        ++.++..++  +..++|.+||......          ......|..+|.
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~----------~~~~~~Y~asKa  143 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP----------IENLYTSNSARM  143 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTBHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc----------ccccccchhHHH
Confidence            9864221                        233344444  5568999998765311          111122337898


Q ss_pred             hHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCc
Q 024575          134 NTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (265)
Q Consensus       134 ~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (265)
                      .++.+.       ...|++++.|.||.+..+...............+.-++.         -+...+|+|+++++++...
T Consensus       144 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~S~~  214 (234)
T d1o5ia_         144 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR---------RMAKPEEIASVVAFLCSEK  214 (234)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS---------SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhChh
Confidence            888665       356899999999998776421111112222222222222         2445899999999988543


Q ss_pred             c--ccCceEEecCCC
Q 024575          207 K--ASRQVFNISGEK  219 (265)
Q Consensus       207 ~--~~~~~~~i~~~~  219 (265)
                      .  ..|+.+.+.||.
T Consensus       215 s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         215 ASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             hcCCcCcEEEECccc
Confidence            2  468899998874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.58  E-value=2.6e-14  Score=110.60  Aligned_cols=196  Identities=19%  Similarity=0.180  Sum_probs=125.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||.++++.|+++|++|++..|+..+..+...    ..+.....++..+.+|++|+++++++++.     ..+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH----HHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            8999999999999999999999988877655322211    22222345788999999999888776653     26999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCCCCCcEEEEeccee-eecCCCCCCCCCCCCCcccccc
Q 024575           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHK  130 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~~~~~~v~~Ss~~~-~~~~~~~~~~e~~~~~~~~~~~  130 (265)
                      +||++|.....                        .+.++..++...+.+.++|... ...          .+....|..
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~----------~~~~~~Y~a  157 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG----------IPNHALYAG  157 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS----------CCSCHHHHH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC----------CCCchhHHH
Confidence            99999974221                        3334444553345555554332 110          111122338


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCC------------CCCchhHHHHHHHHcCCcccCCCCCCceeeeee
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                      +|...+.+.+       ..++++..|.||.+-.+.            ........+.....+..++.         -+..
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~  228 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---------RIGY  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---------SCBC
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---------CCcC
Confidence            8988887753       468999999999886431            00111112222333333332         2445


Q ss_pred             HHHHHHHHHHHhcCcc--ccCceEEecCCC
Q 024575          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (265)
                      .+|++++++.++.+..  ..|+.+.+.||.
T Consensus       229 p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         229 PADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            8999999999987643  468899988874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.58  E-value=1.7e-14  Score=112.23  Aligned_cols=198  Identities=15%  Similarity=0.155  Sum_probs=129.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+..     .++. ....+.++.+|++|+++++++++.     ..+|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1          12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhc-CCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            799999999999999999999999999865521111     0111 124678899999999988877753     27999


Q ss_pred             EEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc
Q 024575           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (265)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~  127 (265)
                      +||+||....                      +    ++.++..+.  +..++|++||...+..          ......
T Consensus        86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~----------~~~~~~  155 (268)
T d2bgka1          86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA----------GEGVSH  155 (268)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC----------CTTSCH
T ss_pred             eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc----------cccccc
Confidence            9999985311                      0    233444443  5568999988765311          111122


Q ss_pred             cc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--hHHHHHH-HHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      .| .+|..++.+.+       ..+++++.|.||.+..|.....+  ....... .....  ...      .-+...+|+|
T Consensus       156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~------gr~~~pedvA  227 (268)
T d2bgka1         156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA--NLK------GTLLRAEDVA  227 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC--SSC------SCCCCHHHHH
T ss_pred             ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcc--ccC------CCCcCHHHHH
Confidence            45 78988887753       57899999999999877522111  1111111 11111  110      1244589999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCccC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                      +++++++.+.  ...|+.+.+.||...+
T Consensus       228 ~~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         228 DAVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhChhhCCccCceEEECcCcccC
Confidence            9999988643  3468999999886543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.56  E-value=9.8e-15  Score=112.45  Aligned_cols=191  Identities=15%  Similarity=0.163  Sum_probs=126.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+++...+        ...++..+..++++|+++++++.++++.     ..+|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_          12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ--------LAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--------HHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            8999999999999999999999999997654211        1122235688899999999888776654     27999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      +||+||.....                        .+.++..++ +..++|++||...+-           +......| 
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~-----------~~~~~~~Y~  152 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL-----------PIEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc-----------Ccccccccc
Confidence            99999974221                        334445555 557899999977531           11122334 


Q ss_pred             cchhhHHHHHh-------h--cCCceeEeecceeeCCCCCCchhHHHHHHHHcCC---cccC-CCCCCceeeeeeHHHHH
Q 024575          130 KGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR---PIPI-PGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       130 ~~k~~~E~~~~-------~--~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~i~~~D~a  196 (265)
                      .+|..++.+.+       .  ++++++.|.||.+..+.         ........   .... .......--+...+|+|
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~---------~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA  223 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM---------MQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA  223 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH---------HHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh---------HHhhCcchhhHHHHHhCccccccCCCCCHHHHH
Confidence            88988877652       2  35899999999986652         11111100   0000 00000112466789999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCC
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEK  219 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (265)
                      +++++++...  ...|+.+.+.||-
T Consensus       224 ~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         224 QLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHhChhhCCCcCcEEEECccH
Confidence            9999988643  2468899998863

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.2e-14  Score=109.97  Aligned_cols=191  Identities=14%  Similarity=0.119  Sum_probs=127.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-cCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~d~vi~~   79 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+ +.+         ..+++...+|+.+.+.++..... .++|++||+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~-~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1          12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQE-LEK---------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-GGG---------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHh---------ccCCceeeeeccccccccccccccccceeEEec
Confidence            7999999999999999999999999998765322 211         36788889999887766665543 379999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccc-cccch
Q 024575           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGK  132 (265)
Q Consensus        80 a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~-~~~~k  132 (265)
                      +|.....                        .+.++..+.  +..++|++||...-          ..+..... |..+|
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK  151 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence            9974221                        222333333  55689999876530          01112223 34889


Q ss_pred             hhHHHHHh-------hcCCceeEeecceeeCCCCC-----CchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       133 ~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      ...+.+.+       ..|++++.|.||.+-.|...     ..............-++         .-+...+|+++++.
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~  222 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCV  222 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            99888763       46899999999998775310     00011122222222222         12556899999999


Q ss_pred             HHhcCc--cccCceEEecCCCc
Q 024575          201 QVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      .++.+.  ...|+.+.+.+|..
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhChhhCCCcCceEEeCCCcC
Confidence            998653  34688999988754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.55  E-value=2.3e-14  Score=111.23  Aligned_cols=195  Identities=14%  Similarity=0.134  Sum_probs=121.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhh---hhccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||++.||++++++|+++|++|++.+|+.+...+..     .++..   ...++.++.+|+++++++.++++.     .+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_          11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999876522111     11111   124689999999999988877754     27


Q ss_pred             ccEEEEcCCCCcc------------------------c----hHHHHHhCC-CCCcEEEEecce-eeecCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSSAG-VYLKSDLLPHCETDT  122 (265)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~l~~~~~-~~~~~v~~Ss~~-~~~~~~~~~~~e~~~  122 (265)
                      +|++||+||....                        +    ++.++..++ +...+|.++|.. .+           .+
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~-----------~~  154 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL-----------HA  154 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS-----------SC
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc-----------cc
Confidence            9999999986310                        0    222333344 334555555533 21           11


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch--------hHHHHHHHHcCCcccCCCCCCce
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQV  186 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  186 (265)
                      ......| .+|...+.+.+       ..|++++.|.||.+-.+......        .........+.-++.        
T Consensus       155 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--------  226 (264)
T d1spxa_         155 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG--------  226 (264)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS--------
T ss_pred             CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC--------
Confidence            1112335 88988887753       56899999999998765321110        011111111111221        


Q ss_pred             eeeeeHHHHHHHHHHHhcCc---cccCceEEecCCCc
Q 024575          187 TQLGHVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (265)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~  220 (265)
                       -+...+|+|++++.++.++   ...|+.+.+.||..
T Consensus       227 -R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         227 -VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             -SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             -CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence             2345899999999988643   24688999988754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.54  E-value=1.8e-14  Score=111.59  Aligned_cols=203  Identities=14%  Similarity=0.198  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+..+..+...    ........++..+.+|+++++++.++++.     ..+|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            7999999999999999999999999999876322111    11122235788999999999988877753     26999


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+|+.....                        .+.++..+.   ....++..|+..........   .........|
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~---~~~~~~~~~Y  167 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS---LNGSLTQVFY  167 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE---TTEECSCHHH
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc---cccCccccch
Confidence            99999874221                        222333332   34456666655432110000   0000111223


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|...+.+.       ...|++++.|.||.+-.+.. ..............-++..         +...+|+|++++.
T Consensus       168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~R---------~g~pedvA~~v~f  237 (260)
T d1h5qa_         168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDHQASNIPLNR---------FAQPEEMTGQAIL  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG-GGSCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch-hccCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHH
Confidence            38898888765       35789999999999876531 1122233333333333322         3348999999999


Q ss_pred             HhcCcc--ccCceEEecCCCc
Q 024575          202 VLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ++.+..  ..|+.+.+.||..
T Consensus       238 L~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         238 LLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcchhCCCcCceEEECCCee
Confidence            885432  4688999998763

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.54  E-value=1e-14  Score=112.47  Aligned_cols=190  Identities=13%  Similarity=0.072  Sum_probs=123.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+.+... .+        ..  ....+..+|+++.+++.++++.     .++|+
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~-~~--------~~--~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-EL--------EA--FAETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH-HH--------HH--HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HH--------Hh--hhCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999998765521 11        11  1223456788877666555432     27999


Q ss_pred             EEEcCCCCcc---------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +||+||....                     +    ++.++..++  +..++|++||...+..          ......|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~----------~~~~~~Y  144 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP----------WKELSTY  144 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC----------CTTCHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc----------ccccccc
Confidence            9999886321                     0    223333344  5678999999765311          1111223


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCch-------hHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      ..+|..++.+.       ...+++++.|.||.+..+.....+       .........+..++..         +...+|
T Consensus       145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R---------~g~ped  215 (252)
T d1zmta1         145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR---------LGTQKE  215 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSS---------CBCHHH
T ss_pred             ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCC---------CcCHHH
Confidence            38898888775       357899999999998776422111       1122333333223322         345899


Q ss_pred             HHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      +|+++++++.+..  ..|+.+.+.||..
T Consensus       216 vA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         216 LGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            9999999986543  4688999998854

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=5.1e-14  Score=108.84  Aligned_cols=195  Identities=12%  Similarity=0.085  Sum_probs=122.9

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|  .||++++++|+++|++|++..|++... ...     .+..........+++|++|+++++++++.     .++
T Consensus        14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~-~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR-PEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGH-HHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHH-HHH-----HHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            79987  799999999999999998888864331 111     11122235678899999999888877653     269


Q ss_pred             cEEEEcCCCCcc------------------------chHHHHHhC----CCCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREAD------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+++....                        ....+.+++    ++..++|++||.....           +...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~-----------~~~~  156 (256)
T d1ulua_          88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-----------VVPK  156 (256)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------BCTT
T ss_pred             eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC-----------CCCC
Confidence            999999986311                        111222221    2345799999876531           1111


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|..++.+.+       ..|++++.+.||.+..+..... ..........+.-++..         +...+|+|
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R---------~~~pedvA  227 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR---------NITQEEVG  227 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSS---------CCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCC---------CcCHHHHH
Confidence            2234 88988887753       5789999999999877642211 11223333333223322         33489999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                      +++++++....  ..|+.+.+.+|..+
T Consensus       228 ~~v~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         228 NLGLFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhCCccCCeEEECcCEeC
Confidence            99999886533  46889999887654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.53  E-value=2e-13  Score=106.35  Aligned_cols=197  Identities=16%  Similarity=0.113  Sum_probs=127.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|+..+..+.+.    ..+......+.++++|+++++++.+.++.     .++|+
T Consensus        24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVV----AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHH----HHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            8999999999999999999999999988655322211    12223345789999999999888877653     27899


Q ss_pred             EEEcCCCCccc------------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCccccc-c
Q 024575           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (265)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~  130 (265)
                      ++|+++.....                        .+.++..+....+.+.++|.....          .+......| .
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~~~~~~~~Y~a  169 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------KAVPKHAVYSG  169 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------SSCSSCHHHHH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc----------ccccchhhHHH
Confidence            99999874221                        333444556445777777654210          111222334 8


Q ss_pred             chhhHHHHHh-------hcCCceeEeecceeeCCCC----------CCchhHH-HHH-HHHcCCcccCCCCCCceeeeee
Q 024575          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----------YNPVEEW-FFH-RLKAGRPIPIPGSGIQVTQLGH  191 (265)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~----------~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~i~  191 (265)
                      +|..++.+.+       ..|++++.|.||.+-.+..          ....... ... ...+..++         .-+..
T Consensus       170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~  240 (272)
T d1g0oa_         170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---------RRVGL  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---------CSCBC
T ss_pred             HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---------CCCcC
Confidence            8988887763       4789999999998865410          0000000 000 01111111         12456


Q ss_pred             HHHHHHHHHHHhcCcc--ccCceEEecCCCc
Q 024575          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      .+|+|.+++.++....  ..|+.+.+.||..
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence            8999999999986543  4688999988753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.53  E-value=2.1e-14  Score=109.74  Aligned_cols=172  Identities=14%  Similarity=0.158  Sum_probs=117.1

Q ss_pred             CCccccchHHHHHHHHHcCCe-------EEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   70 (265)
                      |||++.||+++++.|+++|++       |++.+|+.+...+ +.    .++......+.++.+|++|++++.++++.   
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~-~~----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEK-IS----LECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHH-HH----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHH-HH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999987       8888887655211 11    11222235688899999999988776653   


Q ss_pred             --cCccEEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCC
Q 024575           71 --KGFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                        ..+|++||+||....                    +    ++.++..++  +..++|++||...+.           +
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~  150 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK-----------A  150 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------C
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC-----------C
Confidence              269999999997422                    1    333444554  567899999987531           1


Q ss_pred             CCccccc-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHH
Q 024575          123 VDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (265)
                      ......| .+|..++.+.       +..|++++.+.||.+-.+....               +   . ......+...+|
T Consensus       151 ~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------------~---~-~~~~~~~~~Ped  211 (240)
T d2bd0a1         151 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------------V---D-DEMQALMMMPED  211 (240)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------------C---C-STTGGGSBCHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------------c---C-HhhHhcCCCHHH
Confidence            1112234 8898877765       3468999999999987663100               0   0 011123456899


Q ss_pred             HHHHHHHHhcCcc
Q 024575          195 LARAFVQVLGNEK  207 (265)
Q Consensus       195 ~a~~~~~~~~~~~  207 (265)
                      +|++++.++.++.
T Consensus       212 vA~~v~~l~s~~~  224 (240)
T d2bd0a1         212 IAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHTSCT
T ss_pred             HHHHHHHHHcCCc
Confidence            9999999987754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.51  E-value=1.3e-14  Score=113.21  Aligned_cols=197  Identities=16%  Similarity=0.133  Sum_probs=124.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh---hccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+ ..    .++...   ..++..+.+|++++++++++++.     ..
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~~----~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_          10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEE-TK----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998655211 11    111111   24678999999999988777654     26


Q ss_pred             ccEEEEcCCCCcc----------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        73 ~d~vi~~a~~~~~----------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      +|++||+||....                      +    .+.++..+.  +..+++++||.....           +..
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-----------~~~  153 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----------AHS  153 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------CCT
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------cCC
Confidence            9999999986311                      0    222333333  456777777755321           111


Q ss_pred             ccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCC----CchhH-HHHHHHHcC-CcccCCCCCCceeeee
Q 024575          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----NPVEE-WFFHRLKAG-RPIPIPGSGIQVTQLG  190 (265)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~----~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~i  190 (265)
                      ....| .+|..++.+.+       ..|++++.|.||.+..|...    ..... ......... ..+++       .-+.
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-------gR~g  226 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-------GHCG  226 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCB
T ss_pred             CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-------CCCc
Confidence            12335 88988887753       47899999999998765310    00001 111111111 11111       1234


Q ss_pred             eHHHHHHHHHHHhcCc---cccCceEEecCCCc
Q 024575          191 HVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~  220 (265)
                      ..+|+|+++++++..+   ...|+.+.+.||..
T Consensus       227 ~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         227 KPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            5899999999988532   24788999998864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.50  E-value=1.5e-14  Score=112.74  Aligned_cols=198  Identities=15%  Similarity=0.143  Sum_probs=122.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh---hccceEEEecCCChHHHHHHhhc-----cC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~   72 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+..     ..+...   ..++..+.+|++|+++++++++.     .+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_          11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999875521110     011110   24688999999999988777754     27


Q ss_pred             ccEEEEcCCCCcc------------------------c----hHHHHHhCC-CCCcEEEE-ecceeeecCCCCCCCCCCC
Q 024575           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYC-SSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~l~~~~~-~~~~~v~~-Ss~~~~~~~~~~~~~e~~~  122 (265)
                      +|++||+||....                        +    ++.++..++ +...+|.+ |+....           .+
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~-----------~~  154 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP-----------QA  154 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------SC
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc-----------cC
Confidence            9999999986321                        0    122333333 22344544 444321           11


Q ss_pred             CCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCC----C-chhHHHHHHHHc-CCcccCCCCCCceee
Q 024575          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKA-GRPIPIPGSGIQVTQ  188 (265)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~----~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~  188 (265)
                      ......| .+|...+.+.+       ..+++++.|.||.+-.+...    . ............ ...+++       .-
T Consensus       155 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------gR  227 (272)
T d1xkqa_         155 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-------GA  227 (272)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SS
T ss_pred             CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-------CC
Confidence            1112334 88988887753       46899999999998765310    0 001111111111 111111       12


Q ss_pred             eeeHHHHHHHHHHHhcCc---cccCceEEecCCCcc
Q 024575          189 LGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (265)
                      +...+|+|++++.++..+   ...|+.+.+.||..+
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            445899999999988532   246889999988654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.50  E-value=5.3e-14  Score=111.02  Aligned_cols=197  Identities=16%  Similarity=0.156  Sum_probs=124.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||+|.||++++++|++.|++|++++|+..+..+...    .........+..+.+|+++++++.+++..     .++|+
T Consensus        31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~----~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            7999999999999999999999999998765322111    01111235678999999999988766543     37999


Q ss_pred             EEEcCCCCccc--------------------hHHHHH----hC--C-CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           76 VYDINGREADE--------------------VEPILD----AL--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        76 vi~~a~~~~~~--------------------~~~l~~----~~--~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++|+++.....                    ...+..    .+  . ....++.+|+......          ......|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~----------~~~~~~Y  176 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----------SGFVVPS  176 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------CTTCHHH
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc----------ccccchH
Confidence            99999874221                    011111    11  1 4455667776553211          1112224


Q ss_pred             ccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCc--hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      ..+|...+.+.+       ..|++++.|.||.+..+.....  ..........+.-++.         -+...+|+|+++
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v  247 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANLA  247 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHHH
Confidence            488998888763       4689999999999977642111  1112233333332322         234589999999


Q ss_pred             HHHhcCcc--ccCceEEecCCCc
Q 024575          200 VQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      ..++.+..  ..|+.+.+.||..
T Consensus       248 ~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         248 AFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHhCchhcCCCCcEEEECCChh
Confidence            99986533  4788999998854

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.45  E-value=1.2e-13  Score=107.82  Aligned_cols=193  Identities=19%  Similarity=0.163  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||+++++.|+++|++|++.+|++++..+        ...+...++..+.+|++++++++++++.     ..+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_          11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE--------LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            7999999999999999999999999998654211        1122246789999999999888776653     27999


Q ss_pred             EEEcCCCCcc-------------------------c----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           76 VYDINGREAD-------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        76 vi~~a~~~~~-------------------------~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      +||+||....                         +    ++.++..++ +..++|+++|...+-.          ....
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~----------~~~~  152 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP----------NGGG  152 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST----------TSSC
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC----------CCCC
Confidence            9999985311                         0    222333443 3357888887654210          1111


Q ss_pred             cccccchhhHHHHHh------hcCCceeEeecceeeCCCCCCchh---------HHHHHHHHcCCcccCCCCCCceeeee
Q 024575          126 KSRHKGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (265)
Q Consensus       126 ~~~~~~k~~~E~~~~------~~~~~~~i~r~~~i~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (265)
                      ..|..+|..++.+.+      ..+++++.|.||.+-.+.......         ..+.......-++..         +.
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g  223 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR---------MP  223 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSS---------CC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCC---------Cc
Confidence            223388988887753      135999999999987653211110         011122222222222         33


Q ss_pred             eHHHHHHHHHHHhcC---ccccCceEEecCCCc
Q 024575          191 HVKDLARAFVQVLGN---EKASRQVFNISGEKY  220 (265)
Q Consensus       191 ~~~D~a~~~~~~~~~---~~~~~~~~~i~~~~~  220 (265)
                      ..+|+|.+++.++..   ....|+.+++.||-.
T Consensus       224 ~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         224 EVEEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             CGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             CHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence            479999999888743   234688999988743

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.44  E-value=4e-13  Score=103.92  Aligned_cols=182  Identities=16%  Similarity=0.141  Sum_probs=117.2

Q ss_pred             CCccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~   75 (265)
                      |||+|.||.+++++|+++|+ .|++++|+..... ... ....++......+.++.+|++|.+++.++++.    ..+|.
T Consensus        15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~-~~~-~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~   92 (259)
T d2fr1a1          15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDAD-GAG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA   92 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGST-THH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHH-HHH-HHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence            79999999999999999998 5788888643311 110 01122222335689999999999998887764    25899


Q ss_pred             EEEcCCCCcc--------------------chHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchh
Q 024575           76 VYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (265)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~  133 (265)
                      |+|+++....                    +..++.+++.  ...++|++||....-...          ....|..+|.
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~----------~~~~YaAaka  162 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP----------GLGGYAPGNA  162 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT----------TCTTTHHHHH
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc----------ccHHHHHHHH
Confidence            9999987422                    2334555554  567899999877542111          1122348888


Q ss_pred             hHHHHH---hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCccc
Q 024575          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       134 ~~E~~~---~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      .++.+.   +..|++++.|.||.+.+++.....    .    . ..+..     .-...+..+++++++..++..+..
T Consensus       163 ~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~----~----~-~~~~~-----~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         163 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP----V----A-DRFRR-----HGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCBC---------------------CTT-----TTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             hHHHHHHHHHhCCCCEEECCCCcccCCccccch----H----H-HHHHh-----cCCCCCCHHHHHHHHHHHHhCCCc
Confidence            887765   457899999999988766421110    0    0 11111     113457789999999999987654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=4.5e-13  Score=105.56  Aligned_cols=208  Identities=12%  Similarity=0.093  Sum_probs=133.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCC-CChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||+++++.|+++|++|++.+|+.+........ .......++......+.+|+.|.++.+++++.     .++|
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD   92 (302)
T d1gz6a_          13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   92 (302)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence            89999999999999999999999999876642211111 11122233334566778888887666554432     2699


Q ss_pred             EEEEcCCCCccc------------------------hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      ++||+||.....                        .+.++..++  +..++|++||...+-..          +....|
T Consensus        93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~----------~~~~~Y  162 (302)
T d1gz6a_          93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN----------FGQANY  162 (302)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------TTCHHH
T ss_pred             EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC----------CCcHHH
Confidence            999999974221                        333444454  55799999997754111          111233


Q ss_pred             ccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHH
Q 024575          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (265)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (265)
                      ..+|..++.+.       ...|++++.|.||.+-.+.  ......                  ....++..+|+|.++++
T Consensus       163 ~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~--~~~~~~------------------~~~~~~~PedvA~~v~f  222 (302)
T d1gz6a_         163 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT--ETVMPE------------------DLVEALKPEYVAPLVLW  222 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT--GGGSCH------------------HHHHHSCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch--hhcCcH------------------hhHhcCCHHHHHHHHHH
Confidence            48898888775       3578999999998753321  000000                  11123346999999999


Q ss_pred             HhcCc-cccCceEEecCC-------------------CccCHHHHHHHHHHHhCCCc
Q 024575          202 VLGNE-KASRQVFNISGE-------------------KYVTFDGLARACAKVTGLLD  238 (265)
Q Consensus       202 ~~~~~-~~~~~~~~i~~~-------------------~~~s~~el~~~i~~~~g~~~  238 (265)
                      ++... ...|+.+.+.+|                   .+.|..++++.+.+......
T Consensus       223 L~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~  279 (302)
T d1gz6a_         223 LCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSN  279 (302)
T ss_dssp             HTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTT
T ss_pred             HcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCccc
Confidence            87532 235666655443                   45688899999888877554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.3e-13  Score=106.35  Aligned_cols=183  Identities=17%  Similarity=0.184  Sum_probs=113.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||++.||.++++.|+++|++|++.+|++.+..+..     .++...  ..++.++++|++++++++++++.     .++
T Consensus        16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865522111     111111  24688899999999988776653     279


Q ss_pred             cEEEEcCCCCccc------------------------hHHHHHhCC----CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~l~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |++||+|+.....                        .+.++..+.    ...++|++||...+.         ..+...
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------~~p~~~  161 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR---------VLPLSV  161 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS---------CCSCGG
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC---------CCCCcc
Confidence            9999999874221                        222333322    346899999877421         011111


Q ss_pred             cccc-cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHH
Q 024575          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (265)
                      ...| .+|..++.+.+         ..+++++.+.||.+-.+.     .    ........-.. ........+...+|+
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~-----~----~~~~~~~~~~~-~~~~~~~r~~~pedv  231 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF-----A----FKLHDKDPEKA-AATYEQMKCLKPEDV  231 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH-----H----HHHTTTCHHHH-HHHHC---CBCHHHH
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh-----h----hhcChhhHHHH-HhcCCCCCCcCHHHH
Confidence            2224 88888776642         357999999998775442     1    11100000000 000011235679999


Q ss_pred             HHHHHHHhcCcc
Q 024575          196 ARAFVQVLGNEK  207 (265)
Q Consensus       196 a~~~~~~~~~~~  207 (265)
                      |++++.++.++.
T Consensus       232 A~~v~fL~s~~a  243 (257)
T d1xg5a_         232 AEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhCChh
Confidence            999999987653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.43  E-value=2e-13  Score=105.07  Aligned_cols=195  Identities=16%  Similarity=0.091  Sum_probs=122.7

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC-ChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||.+++++|+++|++|+++.|+.++.. .+.   .........++.++.+|++ +.++++++++.     .++|
T Consensus        11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~-~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1          11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALA---ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-HHH---HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHH-HHH---HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999876521 111   0011111347889999998 55556554432     2799


Q ss_pred             EEEEcCCCCccc----------------hHHHHHhCC-----CCCcEEEEecceeeecCCCCCCCCCCCCCccccccchh
Q 024575           75 VVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (265)
Q Consensus        75 ~vi~~a~~~~~~----------------~~~l~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~~~k~  133 (265)
                      ++||+||.....                ++.++..+.     ...++|++||...+..          .+....|..+|.
T Consensus        87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~----------~~~~~~Y~asKa  156 (254)
T d1sbya1          87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----------IHQVPVYSASKA  156 (254)
T ss_dssp             EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------CTTSHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----------CCCCHHHHHHHH
Confidence            999999974221                333444443     2467999998775311          111123348898


Q ss_pred             hHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCccc-CCCCCCceeeeeeHHHHHHHHHHHhcC
Q 024575          134 NTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGN  205 (265)
Q Consensus       134 ~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (265)
                      ....+.       ...+++++.|.||.+..+.         ........... ........+.....+++|++++.+++.
T Consensus       157 al~~~t~~la~el~~~gIrVn~I~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~  227 (254)
T d1sbya1         157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPL---------VHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHSEEEEEEEECSEESHH---------HHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccccCeEEEEEEeCCCcCcc---------ccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC
Confidence            887765       3568999999999997751         11100000000 000000112345789999999988876


Q ss_pred             ccccCceEEecCCC
Q 024575          206 EKASRQVFNISGEK  219 (265)
Q Consensus       206 ~~~~~~~~~i~~~~  219 (265)
                      .. .|+.+.+.+|.
T Consensus       228 ~~-tG~vi~vdgG~  240 (254)
T d1sbya1         228 NK-NGAIWKLDLGT  240 (254)
T ss_dssp             CC-TTCEEEEETTE
T ss_pred             CC-CCCEEEECCCE
Confidence            54 58889888874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=7.8e-14  Score=106.60  Aligned_cols=171  Identities=15%  Similarity=0.148  Sum_probs=114.9

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||++++++|+++|++|++.+|+.++..+ +.    .++.....++..+.+|++|++++.++++.     ..+|+
T Consensus        13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~-~~----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_          13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE-TA----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            7999999999999999999999999998765221 11    12223345789999999999888776653     26999


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCccccc
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~  129 (265)
                      +||++|....                    +    ++.++..+.  +..++|++||...+-           +......|
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~-----------~~~~~~~Y  156 (244)
T d1yb1a_          88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVPFLLAY  156 (244)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHHHHHHH
T ss_pred             eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC-----------CCCCcHHH
Confidence            9999997422                    1    223344444  556899999987531           11112234


Q ss_pred             -cchhhHHHHHh-------h---cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          130 -KGKLNTESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       130 -~~k~~~E~~~~-------~---~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                       .+|...+.+.+       .   .|++++.+.||.+-.+....             ...       ....++..+|+++.
T Consensus       157 ~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-------------~~~-------~~~~~~~pe~va~~  216 (244)
T d1yb1a_         157 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------PST-------SLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------THH-------HHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-------------cCc-------cccCCCCHHHHHHH
Confidence             88988777652       1   47999999999765442110             000       11233457999999


Q ss_pred             HHHHhcCcc
Q 024575          199 FVQVLGNEK  207 (265)
Q Consensus       199 ~~~~~~~~~  207 (265)
                      +...+..+.
T Consensus       217 i~~~~~~~~  225 (244)
T d1yb1a_         217 LMHGILTEQ  225 (244)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            988776654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.38  E-value=5.9e-12  Score=96.14  Aligned_cols=184  Identities=16%  Similarity=0.175  Sum_probs=117.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc----cCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (265)
                      |||++.||+++++.|+++|++|++.+|+++.                 .+.....+|+.+......+...    ...+.+
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            7999999999999999999999999998765                 4556788999887655544332    245555


Q ss_pred             EEcCCCCcc------------------------c----hHHHHHh------CC--CCCcEEEEecceeeecCCCCCCCCC
Q 024575           77 YDINGREAD------------------------E----VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (265)
Q Consensus        77 i~~a~~~~~------------------------~----~~~l~~~------~~--~~~~~v~~Ss~~~~~~~~~~~~~e~  120 (265)
                      ++.++....                        .    .+.++..      +.  +..++|++||...+-.         
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~---------  140 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------  140 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC---------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC---------
Confidence            555443110                        0    1112222      11  3458999999876421         


Q ss_pred             CCCCccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHH
Q 024575          121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (265)
Q Consensus       121 ~~~~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (265)
                       .+....|..+|..++.+.+       ..|++++.|.||.+..+..... ............+  ..+      -+...+
T Consensus       141 -~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~--~~~------R~g~pe  210 (241)
T d1uaya_         141 -QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PEKAKASLAAQVP--FPP------RLGRPE  210 (241)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CHHHHHHHHTTCC--SSC------SCCCHH
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh-hhhHHHHHHhcCC--CCC------CCcCHH
Confidence             1111234488998888753       5689999999999866531111 1111222222211  111      134589


Q ss_pred             HHHHHHHHHhcCccccCceEEecCCCc
Q 024575          194 DLARAFVQVLGNEKASRQVFNISGEKY  220 (265)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (265)
                      |+|++++.++++....|+.+.+.||-.
T Consensus       211 dvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         211 EYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhCCCCCCCEEEECCccc
Confidence            999999999887656789999988754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=7e-12  Score=96.76  Aligned_cols=196  Identities=14%  Similarity=0.097  Sum_probs=125.3

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|  .||+++++.|+++|++|++..|++... ...     .+..........+..|..+..+..+.+..     ..+
T Consensus        11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_          11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH-HHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence            79998  788999999999999999999985431 111     12222245678889999987776655532     268


Q ss_pred             cEEEEcCCCCccc-------------------------hHHHHHhC----CCCCcEEEEecceeeecCCCCCCCCCCCCC
Q 024575           74 DVVYDINGREADE-------------------------VEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (265)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~l~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~  124 (265)
                      |+++|+++.....                         ...+.+++    ++...++++||......          .+.
T Consensus        85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~----------~~~  154 (258)
T d1qsga_          85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------IPN  154 (258)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------CTT
T ss_pred             ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC----------CCC
Confidence            9999998764211                         11222222    23456888888664210          111


Q ss_pred             ccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch-hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...|..+|...+.+.+       ..+++++.|+||.+..+...... ............++..         +...+|+|
T Consensus       155 ~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~~peeia  225 (258)
T d1qsga_         155 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR---------TVTIEDVG  225 (258)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS---------CCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCC---------CcCHHHHH
Confidence            1223489999988764       46899999999999877532211 1222223322222221         34489999


Q ss_pred             HHHHHHhcCc--cccCceEEecCCCcc
Q 024575          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                      +++..++.+.  ...|+.+.+.+|..+
T Consensus       226 ~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         226 NSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhcCccCceEEECcCHHH
Confidence            9999998653  347889999988654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=6.5e-13  Score=103.94  Aligned_cols=188  Identities=15%  Similarity=0.121  Sum_probs=114.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEE---cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc---cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFT---RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d   74 (265)
                      |||++.||+++++.|+++|.+|+.+.   |+.... ..+.+ ....+.....++..+.+|++|.+++.++++.   ..+|
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~-~~l~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id   85 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ-GRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD   85 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT-HHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhh-HHHHH-HHHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence            89999999999999999998765554   433221 11000 0001111135789999999999998877754   3699


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCC--CCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      +++|+++....                    +    ++.++..++  +..++|++||....-           +......
T Consensus        86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~-----------~~~~~~~  154 (285)
T d1jtva_          86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GLPFNDV  154 (285)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CCTTCHH
T ss_pred             hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC-----------CCCCchH
Confidence            99999987422                    1    233444444  567999999987531           1112233


Q ss_pred             c-cchhhHHHHH-------hhcCCceeEeecceeeCCCCCCch--------------hHHHHHHHHcCCcccCCCCCCce
Q 024575          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV--------------EEWFFHRLKAGRPIPIPGSGIQV  186 (265)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~  186 (265)
                      | .+|..++.+.       +..|++++.+.||.+-.+......              ...+.......+.+.       .
T Consensus       155 Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  227 (285)
T d1jtva_         155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-------R  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-------H
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh-------c
Confidence            5 8899888775       357899999999998665311100              000111110111110       0


Q ss_pred             eeeeeHHHHHHHHHHHhcCccc
Q 024575          187 TQLGHVKDLARAFVQVLGNEKA  208 (265)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~~  208 (265)
                      ......+|+|++++.++..+.+
T Consensus       228 ~~~~~PeeVA~~v~~~~~~~~p  249 (285)
T d1jtva_         228 EAAQNPEEVAEVFLTALRAPKP  249 (285)
T ss_dssp             HHCBCHHHHHHHHHHHHHCSSC
T ss_pred             ccCCCHHHHHHHHHHHHhCCCC
Confidence            1244589999999999987654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2e-11  Score=93.53  Aligned_cols=187  Identities=16%  Similarity=0.196  Sum_probs=115.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      |||++.||.+++++|+++|++|++++|+.++...        ...++........+|+.+.+...+....     ...|.
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1          11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--------QAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHHhCCCcccccccccccccccccccccccccccccc
Confidence            7999999999999999999999999998776321        2233346778888999887655543332     26788


Q ss_pred             EEEcCCCCcc--------------------------c----hHHHHHhCC--------CCCcEEEEecceeeecCCCCCC
Q 024575           76 VYDINGREAD--------------------------E----VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPH  117 (265)
Q Consensus        76 vi~~a~~~~~--------------------------~----~~~l~~~~~--------~~~~~v~~Ss~~~~~~~~~~~~  117 (265)
                      ++++++.+..                          +    ++.++..+.        +..++|++||...+-       
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-------  155 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-------  155 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-------
Confidence            8877654211                          1    112222211        234799999987642       


Q ss_pred             CCCCCCCccccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeee
Q 024575          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (265)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (265)
                          +......| .+|...+.+.+       ..+++++.|.||.+..+... .+.........+.  +++.+      -+
T Consensus       156 ----~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~--~pl~~------R~  222 (248)
T d2o23a1         156 ----GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT-SLPEKVCNFLASQ--VPFPS------RL  222 (248)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHT--CSSSC------SC
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh-cCCHHHHHHHHhc--CCCCC------CC
Confidence                11112334 89999888763       46899999999998766321 1111111111111  11111      14


Q ss_pred             eeHHHHHHHHHHHhcCccccCceEEe
Q 024575          190 GHVKDLARAFVQVLGNEKASRQVFNI  215 (265)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i  215 (265)
                      ...+|+|++++.+++++...|+..+|
T Consensus       223 g~peevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         223 GDPAEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             cCHHHHHHHHHHHHhCCCCCceEeEC
Confidence            46899999999998765555666553

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=1.4e-12  Score=100.84  Aligned_cols=190  Identities=16%  Similarity=0.121  Sum_probs=116.9

Q ss_pred             CCccccchHHHHHHHHH---cCCeEEEEEcCCCccccCCCCCChhHHhhh--hccceEEEecCCChHHHHHHhhc-----
Q 024575            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-----   70 (265)
                      |||++.||.+++++|++   +|++|++++|++++.. .+.    .++...  ..++.++.+|+++++++.++++.     
T Consensus        12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~-~~~----~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_          12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR-QLK----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH-HHH----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHH-HHH----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            89999999999999986   6999999999876521 111    111111  23688899999999888777632     


Q ss_pred             ----cCccEEEEcCCCCcc-----------------------c----hHHHHHhCC--C--CCcEEEEecceeeecCCCC
Q 024575           71 ----KGFDVVYDINGREAD-----------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLL  115 (265)
Q Consensus        71 ----~~~d~vi~~a~~~~~-----------------------~----~~~l~~~~~--~--~~~~v~~Ss~~~~~~~~~~  115 (265)
                          ..+|+++|++|....                       +    ++.++..++  +  ..++|++||...+.     
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-----  161 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-----  161 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-----
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC-----
Confidence                256889999875210                       1    233444555  2  35899999876531     


Q ss_pred             CCCCCCCCCccccc-cchhhHHHHHh-----hcCCceeEeecceeeCCCCCCc----hhHHHHHHHHcCCcccCCCCCCc
Q 024575          116 PHCETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRPIPIPGSGIQ  185 (265)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~E~~~~-----~~~~~~~i~r~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  185 (265)
                            +......| .+|..++.+.+     ..+++++.+.||.+..+.....    .............+.        
T Consensus       162 ------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--------  227 (259)
T d1oaaa_         162 ------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD--------  227 (259)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT--------
T ss_pred             ------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC--------
Confidence                  11122334 88988887753     4689999999998866520000    000011111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCcc-ccCceEEe
Q 024575          186 VTQLGHVKDLARAFVQVLGNEK-ASRQVFNI  215 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i  215 (265)
                       ..+...+|+|++++.++.+.. ..|+.+++
T Consensus       228 -~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         228 -GALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             -TCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             -CCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence             123458999999998886432 34555554

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.28  E-value=5.1e-11  Score=92.16  Aligned_cols=196  Identities=15%  Similarity=0.144  Sum_probs=116.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCC----hHHHHHHhhc-----
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD----YDFVKSSLSA-----   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~----~~~~~~~~~~-----   70 (265)
                      |||++.||+++++.|+++|++|++++|+.++..+.+.    .++... ......++.|..+    .+.+.++++.     
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH----HHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999765322211    111111 2455666666654    2333333321     


Q ss_pred             cCccEEEEcCCCCccc-----------------------------------hHHHHHhCC-------CCCcEEEEeccee
Q 024575           71 KGFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGV  108 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~~-----------------------------------~~~l~~~~~-------~~~~~v~~Ss~~~  108 (265)
                      ..+|++||+||.....                                   .......+.       ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            2799999999863210                                   000111111       1234445554433


Q ss_pred             eecCCCCCCCCCCCCCccccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCC
Q 024575          109 YLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG  181 (265)
Q Consensus       109 ~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  181 (265)
                      ..          ..+....|..+|..++.+.+       ..|++++.|.||.+..+....   ........+.-++   +
T Consensus       163 ~~----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~~~~~~~pl---~  226 (266)
T d1mxha_         163 DL----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QETQEEYRRKVPL---G  226 (266)
T ss_dssp             GS----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HHHHHHHHTTCTT---T
T ss_pred             cc----------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HHHHHHHHhcCCC---C
Confidence            10          11111223378998888753       468999999999987664222   2233333332222   1


Q ss_pred             CCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCcc
Q 024575          182 SGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (265)
Q Consensus       182 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (265)
                           +-+...+|+|.++++++.+..  ..|+.+.+.||..+
T Consensus       227 -----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         227 -----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             -----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence                 123458999999999996543  47889999988654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.27  E-value=1.8e-11  Score=93.01  Aligned_cols=172  Identities=13%  Similarity=0.075  Sum_probs=109.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHH-------HHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-------SSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-------~~~~~~~~   73 (265)
                      |||+|.||+++++.|+++|++|++++++..+..               .....+.+|..+.+...       +.+...++
T Consensus         8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999998765521               22233445554443332       22232368


Q ss_pred             cEEEEcCCCCcc-------------------------chHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           74 DVVYDINGREAD-------------------------EVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |++||+||....                         ..+.++..+++..++|++||......          .+....|
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----------~~~~~~Y  142 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG----------TPGMIGY  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------CTTBHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC----------ccCCccc
Confidence            999999985211                         02223333454468999999875311          1111233


Q ss_pred             ccchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHH
Q 024575          129 HKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (265)
Q Consensus       129 ~~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (265)
                      ..+|..++.+.+         ..+++++.+.||.+..|         +........         ..-.++..+|+++.+
T Consensus       143 ~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~pe~va~~~  204 (236)
T d1dhra_         143 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DFSSWTPLEFLVETF  204 (236)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CGGGSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC---------cchhhCccc---------hhhcCCCHHHHHHHH
Confidence            389999988863         24799999999998765         122221111         112467789999999


Q ss_pred             HHHhcCcc--ccCceEEe
Q 024575          200 VQVLGNEK--ASRQVFNI  215 (265)
Q Consensus       200 ~~~~~~~~--~~~~~~~i  215 (265)
                      ..++....  ..|..+.+
T Consensus       205 ~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         205 HDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHTTTTCCCTTCEEEE
T ss_pred             HHHhCCCccCCCCCeEEE
Confidence            99886532  35666655

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.27  E-value=1.8e-11  Score=93.00  Aligned_cols=172  Identities=14%  Similarity=0.130  Sum_probs=107.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH-------HHHHhhccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-------VKSSLSAKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~~~~~~~~   73 (265)
                      |||+|.||++++++|+++|++|++++|++....               .....+.+|..+.+.       +...++..++
T Consensus         8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            799999999999999999999999999876521               122234455544332       2223332468


Q ss_pred             cEEEEcCCCCccc-------------------------hHHHHHhCCCCCcEEEEecceeeecCCCCCCCCCCCCCcccc
Q 024575           74 DVVYDINGREADE-------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (265)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~l~~~~~~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~  128 (265)
                      |++||+||.....                         .+.++..++...++|++||...+.           +......
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~~~~  141 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PTPSMIG  141 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTTBHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC-----------Ccccccc
Confidence            9999999853110                         122333344446899999876531           1112233


Q ss_pred             c-cchhhHHHHHhh---------cCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          129 H-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       129 ~-~~k~~~E~~~~~---------~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      | .+|..++.+.+.         .+++++.+.||.+..+         +.+......         ....++..+|+++.
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~~---------~~~~~~~~~~va~~  203 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPNA---------DHSSWTPLSFISEH  203 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcCC---------ccccCCCHHHHHHH
Confidence            5 999999888631         3678888999987543         222221111         12245678999999


Q ss_pred             HHHHhcCcc---ccCceEEec
Q 024575          199 FVQVLGNEK---ASRQVFNIS  216 (265)
Q Consensus       199 ~~~~~~~~~---~~~~~~~i~  216 (265)
                      ++..+..+.   ..|..+.+.
T Consensus       204 ~~~~l~~~~~~~~tG~~i~v~  224 (235)
T d1ooea_         204 LLKWTTETSSRPSSGALLKIT  224 (235)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEE
T ss_pred             HHHHhcCccccCCCceEEEEE
Confidence            887665432   346666664

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.26  E-value=2.8e-11  Score=94.66  Aligned_cols=196  Identities=11%  Similarity=0.055  Sum_probs=116.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hc-----------------cceEEEecCCChH
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SS-----------------KILHLKGDRKDYD   62 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~D~~~~~   62 (265)
                      |||++.||+++++.|+++|++|++..|+..+..+.+.+    .+... ..                 .+....+|+++.+
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA----TLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHH----HHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            89999999999999999999999998876542221111    00000 11                 2333456688888


Q ss_pred             HHHHHhhc-----cCccEEEEcCCCCccc-----------------------hHHHH-----------Hh----------
Q 024575           63 FVKSSLSA-----KGFDVVYDINGREADE-----------------------VEPIL-----------DA----------   93 (265)
Q Consensus        63 ~~~~~~~~-----~~~d~vi~~a~~~~~~-----------------------~~~l~-----------~~----------   93 (265)
                      +++++++.     .++|++||+||.....                       ..+++           ++          
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            77776643     2799999999874210                       00011           11          


Q ss_pred             CC--CCCcEEEEecceeeecCCCCCCCCCCCCCc-cccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCch
Q 024575           94 LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV  163 (265)
Q Consensus        94 ~~--~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~  163 (265)
                      .+  +..+++.+++....           .+... ..|..+|..++.+.+       ..|++++.|.||..-..   ...
T Consensus       164 ~~~~~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~---~~~  229 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV---DDM  229 (284)
T ss_dssp             GGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG---GGS
T ss_pred             HhcCCCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc---ccC
Confidence            11  23456666665431           11111 223488988887753       56899999999964221   122


Q ss_pred             hHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHHHHhcCcc--ccCceEEecCCCccC
Q 024575          164 EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (265)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (265)
                      ............++  .+      -+...+|+|+++++++....  ..|+.+.+.||..++
T Consensus       230 ~~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         230 PPAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             CHHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            23334343333221  11      13458999999999886543  468899999987654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.25  E-value=6.5e-11  Score=92.00  Aligned_cols=194  Identities=12%  Similarity=0.072  Sum_probs=120.6

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCc
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~   73 (265)
                      |||+|  .||.++++.|+++|++|++.+|++... +..     .++........+..+|++++++..+++..     ..+
T Consensus        11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~-~~~-----~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1          11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH-HHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHH-----HHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            68877  799999999999999999999985431 111     12222245678899999998877666532     279


Q ss_pred             cEEEEcCCCCccc------------------------hHHHHHh-CC---CCCcEEEEecceeeecCCCCCCCCCCCCCc
Q 024575           74 DVVYDINGREADE------------------------VEPILDA-LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (265)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~l~~~-~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~  125 (265)
                      |+++|+++.....                        ....... ..   ....++.+|+.....           ....
T Consensus        85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-----------~~~~  153 (274)
T d2pd4a1          85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------YMAH  153 (274)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------BCTT
T ss_pred             CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-----------cccc
Confidence            9999999864211                        1111111 11   223355555544321           1112


Q ss_pred             cccc-cchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchh-HHHHHHHHcCCcccCCCCCCceeeeeeHHHHH
Q 024575          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (265)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (265)
                      ...| .+|..++.+.+       ..|++++.+.||.+..+....... ...........++.         -+...+|+|
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~---------r~~~pedIA  224 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR---------KNVSLEEVG  224 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhcc---------CCcCHHHHH
Confidence            2234 78888887753       468999999999987764221111 11222222222221         234589999


Q ss_pred             HHHHHHhcCcc--ccCceEEecCCCc
Q 024575          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (265)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (265)
                      .+++.++.+..  ..|+.+.+.+|..
T Consensus       225 ~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         225 NAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCceEEECCChh
Confidence            99999886543  4788999999864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.21  E-value=9.7e-11  Score=89.72  Aligned_cols=183  Identities=16%  Similarity=0.130  Sum_probs=107.9

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-------c
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~   71 (265)
                      |||++.||.+++++|+++|+  .|++.+|+.++.. .+.+       ....++.++.+|+++.++++++++.       .
T Consensus         9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~-~l~~-------~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKS-------IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHT-------CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHH-HHHH-------hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999985  7888888876532 1111       1135789999999999887765542       2


Q ss_pred             CccEEEEcCCCCcc---------------------ch----HHHHHhCC-------------CCCcEEEEecceeeecCC
Q 024575           72 GFDVVYDINGREAD---------------------EV----EPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (265)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~~----~~l~~~~~-------------~~~~~v~~Ss~~~~~~~~  113 (265)
                      ++|++||+||....                     +.    +.++..++             ...+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            49999999996311                     11    11222221             124566666554321111


Q ss_pred             CCCCCCCCCCCcc-ccccchhhHHHHH-------hhcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCc
Q 024575          114 LLPHCETDTVDPK-SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (265)
Q Consensus       114 ~~~~~e~~~~~~~-~~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (265)
                      .    ......+. .|..+|..+..+.       +..+++++.+.||.+-.+.         .     ++          
T Consensus       161 ~----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m---------~-----~~----------  212 (250)
T d1yo6a1         161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL---------G-----GK----------  212 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC---------C-----CC----------
Confidence            0    00111222 2348898887765       3578999999999875431         0     00          


Q ss_pred             eeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCCcc
Q 024575          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (265)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (265)
                       ...+..++.++.++..+...  ...|+.|+. .+.++
T Consensus       213 -~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~  248 (250)
T d1yo6a1         213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPY  248 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEET-TEEEC
T ss_pred             -CCCCCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeC
Confidence             11244688888888888653  335655544 33444

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.16  E-value=1.6e-10  Score=88.34  Aligned_cols=142  Identities=18%  Similarity=0.223  Sum_probs=95.7

Q ss_pred             CCccccchHHHHHHHHH---cCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-------
Q 024575            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   70 (265)
                      |||++.||.+++++|++   +|++|++.+|++++.. .+     ..+.....++.++.+|++|+++++++++.       
T Consensus         8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-EL-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HH-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHH-HH-----HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            89999999999999975   6899999999977632 11     12222246899999999999887765542       


Q ss_pred             cCccEEEEcCCCCcc---------------------c----hHHHHHhCC-------------CCCcEEEEecceeeecC
Q 024575           71 KGFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKS  112 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~---------------------~----~~~l~~~~~-------------~~~~~v~~Ss~~~~~~~  112 (265)
                      .++|++||+||....                     +    ++.++..++             +..++|.+||....  .
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence            369999999986311                     0    112222221             24678999886532  0


Q ss_pred             CCCCCCCCCCCCc-c-ccccchhhHHHHH-------hhcCCceeEeecceeeCC
Q 024575          113 DLLPHCETDTVDP-K-SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (265)
Q Consensus       113 ~~~~~~e~~~~~~-~-~~~~~k~~~E~~~-------~~~~~~~~i~r~~~i~g~  157 (265)
                      .       ....+ . .|..+|.....+.       +..+++++.+.||.+-.+
T Consensus       160 ~-------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 Q-------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             T-------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             C-------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            0       11111 2 2338898877764       356899999999988655

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.9e-10  Score=88.98  Aligned_cols=174  Identities=14%  Similarity=0.097  Sum_probs=110.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCccE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (265)
                      ||||+.||+++++.|+++|++|++++|+.++..+...    .........+..+.+|.++.+........     ..+|+
T Consensus        20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            8999999999999999999999999998765321110    01111134677888999887766554432     26899


Q ss_pred             EEEcCCCCcc--------------------c----hHHHHHhCC-CCCcEEEEecceeeecCCCCCCCCCCCCCccccc-
Q 024575           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (265)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-  129 (265)
                      ++++++....                    +    ++.++..++ +..++|.+||...+-           +......| 
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~-----------~~p~~~~Y~  164 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV-----------AYPMVAAYS  164 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-----------CCTTCHHHH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC-----------CCCCchHHH
Confidence            9999886321                    1    223333444 456889999877531           11112234 


Q ss_pred             cchhhHHHHHh---------hcCCceeEeecceeeCCCCCCchhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHHHH
Q 024575          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (265)
Q Consensus       130 ~~k~~~E~~~~---------~~~~~~~i~r~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (265)
                      .+|..++.+.+         ..+++++.+.||.+-.+         +......+.         ........+++++.++
T Consensus       165 asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~~e~~a~~i~  226 (269)
T d1xu9a_         165 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGI---------VHMQAAPKEECALEII  226 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGG---------GGGGCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCC---------ccccCCCHHHHHHHHH
Confidence            89988887652         24688899999987543         222221111         1123345789999888


Q ss_pred             HHhcCcc
Q 024575          201 QVLGNEK  207 (265)
Q Consensus       201 ~~~~~~~  207 (265)
                      ..+...+
T Consensus       227 ~~~~~~~  233 (269)
T d1xu9a_         227 KGGALRQ  233 (269)
T ss_dssp             HHHHTTC
T ss_pred             HHhhcCC
Confidence            7765543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.10  E-value=2.8e-10  Score=88.08  Aligned_cols=197  Identities=15%  Similarity=0.085  Sum_probs=114.4

Q ss_pred             CCccc--cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc--------
Q 024575            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (265)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------   70 (265)
                      |||+|  .||.++++.|+++|++|++..|+..+..+.+.+       ....+...+.+|++++++...+++.        
T Consensus        12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~-------~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1          12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH-------HcCCceeeEeeecccccccccccchhhhccccC
Confidence            78654  599999999999999999999987653221111       1135678899999998765544332        


Q ss_pred             cCccEEEEcCCCCccc-------------------------hHHHHHhCC---CCCcEEEEecceeeecCCCCCCCCCCC
Q 024575           71 KGFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~~-------------------------~~~l~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~e~~~  122 (265)
                      ..+|+++|+++.....                         ......+..   .....+.+++.....          ..
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~----------~~  154 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR----------AM  154 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS----------CC
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc----------cC
Confidence            2579999999863110                         011111111   222333343333210          11


Q ss_pred             CCccccccchhhHHHHHh-------hcCCceeEeecceeeCCC-------CCCchh----HHHHHHHHcCCcccCCCCCC
Q 024575          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-------NYNPVE----EWFFHRLKAGRPIPIPGSGI  184 (265)
Q Consensus       123 ~~~~~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~-------~~~~~~----~~~~~~~~~~~~~~~~~~~~  184 (265)
                      +....|..+|...+.+.+       ..++++..|.||.+-.+.       ......    ..+........++.      
T Consensus       155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------  228 (268)
T d2h7ma1         155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG------  228 (268)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC------
T ss_pred             cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC------
Confidence            112223388988888763       468999999999876531       001111    11111111111111      


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCc--cccCceEEecCCCccC
Q 024575          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (265)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (265)
                        +.+...+|+|+++..++.+.  ...|+.+.+.+|...+
T Consensus       229 --rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         229 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence              12334799999999998543  3468899999886543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=5.7e-11  Score=92.36  Aligned_cols=103  Identities=18%  Similarity=0.171  Sum_probs=73.8

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhc-----cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   74 (265)
                      |||++.||.+++++|++. |++|++..|+.++..+..     .++.....++.++.+|++|.++++++++.     ..+|
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            899999999999999986 899999999977632211     12222245789999999999888766543     2799


Q ss_pred             EEEEcCCCCcc--------------------c----hHHHHHhCCCCCcEEEEeccee
Q 024575           75 VVYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGV  108 (265)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~~~~~~~~~v~~Ss~~~  108 (265)
                      ++||+||....                    +    ++.++..++...++|.+||...
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~  141 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS  141 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence            99999997421                    1    2223333444468999998654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.95  E-value=4.3e-09  Score=80.68  Aligned_cols=187  Identities=17%  Similarity=0.167  Sum_probs=99.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHh----hc--cCcc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA--KGFD   74 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----~~--~~~d   74 (265)
                      |||++.||++++++|+++|++|++++|++.+.                      .+|+.+.+......    .+  ..+|
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999986652                      33555544433222    11  2589


Q ss_pred             EEEEcCCCCccc-------------hHHHH----HhCC--CCCcEEEEecceeeecC-CCCCCC---------------C
Q 024575           75 VVYDINGREADE-------------VEPIL----DALP--NLEQFIYCSSAGVYLKS-DLLPHC---------------E  119 (265)
Q Consensus        75 ~vi~~a~~~~~~-------------~~~l~----~~~~--~~~~~v~~Ss~~~~~~~-~~~~~~---------------e  119 (265)
                      +++++++.....             ...+.    +...  .......+++....... ...+..               .
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            999999864321             11111    1111  22233333332211000 000000               0


Q ss_pred             CCCCC-cc-ccccchhhHHHHHh-------hcCCceeEeecceeeCCCCCCchhH-HHHHHHHcC-CcccCCCCCCceee
Q 024575          120 TDTVD-PK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAG-RPIPIPGSGIQVTQ  188 (265)
Q Consensus       120 ~~~~~-~~-~~~~~k~~~E~~~~-------~~~~~~~i~r~~~i~g~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~  188 (265)
                      ..... +. .|..+|...+.+.+       ..|++++.|.||.+-.|.....+.. .......+. .++         .-
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl---------gR  215 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM---------GR  215 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST---------TS
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC---------CC
Confidence            00001 11 23388988888753       4689999999999876632111110 001111110 011         12


Q ss_pred             eeeHHHHHHHHHHHhcCc--cccCceEEecCC
Q 024575          189 LGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (265)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (265)
                      +...+|+|++++.++...  ...|+.+.+.||
T Consensus       216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            445899999999988543  347889999887

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.91  E-value=9.9e-09  Score=81.48  Aligned_cols=146  Identities=7%  Similarity=-0.047  Sum_probs=80.4

Q ss_pred             CC--ccccchHHHHHHHHHcCCeEEEEEcCCCccc-------cCCCCCChhHHhhhhccceEE-----------------
Q 024575            1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-------QQLPGESDQEFAEFSSKILHL-----------------   54 (265)
Q Consensus         1 tG--atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-----------------   54 (265)
                      ||  ++..||.++++.|+++|.+|++..+......       ..+..................                 
T Consensus         8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (329)
T d1uh5a_           8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK   87 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHH
T ss_pred             eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhh
Confidence            67  5569999999999999999999887643210       000000000000000111122                 


Q ss_pred             ---EecCCChHHHHHHhhc-----cCccEEEEcCCCCcc----------------------chHHHHHh----CCCCCcE
Q 024575           55 ---KGDRKDYDFVKSSLSA-----KGFDVVYDINGREAD----------------------EVEPILDA----LPNLEQF  100 (265)
Q Consensus        55 ---~~D~~~~~~~~~~~~~-----~~~d~vi~~a~~~~~----------------------~~~~l~~~----~~~~~~~  100 (265)
                         .+|+.+.+.+..+++.     .++|++||++|....                      +...+.++    ++...++
T Consensus        88 ~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsI  167 (329)
T d1uh5a_          88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI  167 (329)
T ss_dssp             TSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccc
Confidence               2244444433333321     279999999885321                      01122233    3334578


Q ss_pred             EEEecceeeecCCCCCCCCCCCCCccccc-cchhhHHHHHh--------hcCCceeEeecceeeC
Q 024575          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYG  156 (265)
Q Consensus       101 v~~Ss~~~~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~--------~~~~~~~i~r~~~i~g  156 (265)
                      |.+||.....          ..+....+| .+|..++.+.+        +.|++++.|.||.+-.
T Consensus       168 v~iss~~~~~----------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         168 ISLTYHASQK----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEECGGGTS----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccceeehhcc----------cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            8888766421          011123345 78988887753        3589999999997743

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.85  E-value=5.5e-08  Score=75.93  Aligned_cols=84  Identities=7%  Similarity=-0.012  Sum_probs=54.5

Q ss_pred             cccchhhHHHHH--------hhcCCceeEeecceeeCCCCCCc-hhHHHHHHHHcCCcccCCCCCCceeeeeeHHHHHHH
Q 024575          128 RHKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (265)
Q Consensus       128 ~~~~k~~~E~~~--------~~~~~~~~i~r~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (265)
                      |..+|...+.+.        .+.+++++.|.||.+..+..... ....+.....+.-++.         -+...+|+|.+
T Consensus       192 y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~  262 (297)
T d1d7oa_         192 MSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNA  262 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHH
T ss_pred             eecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHH
Confidence            447777766654        24689999999999988754322 2223333333333332         23458999999


Q ss_pred             HHHHhcCc--cccCceEEecCCCc
Q 024575          199 FVQVLGNE--KASRQVFNISGEKY  220 (265)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~  220 (265)
                      ++.++...  ...|+.+.+.||..
T Consensus       263 v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         263 AAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCceEEECcCHh
Confidence            99998643  34688999988753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.71  E-value=1.2e-09  Score=79.94  Aligned_cols=75  Identities=19%  Similarity=0.183  Sum_probs=60.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |||+|.+|+.+++.|+++|++|+++.|+.++......     .+. ...++....+|+.+.+++.+.+.  ++|++||++
T Consensus        29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A  100 (191)
T d1luaa1          29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD-----SVN-KRFKVNVTAAETADDASRAEAVK--GAHFVFTAG  100 (191)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHH-HHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHH-----HHH-hccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence            7999999999999999999999999999766321110     111 12466788999999999999998  999999999


Q ss_pred             CCC
Q 024575           81 GRE   83 (265)
Q Consensus        81 ~~~   83 (265)
                      |..
T Consensus       101 g~g  103 (191)
T d1luaa1         101 AIG  103 (191)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            864

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.74  E-value=2e-05  Score=53.35  Aligned_cols=68  Identities=16%  Similarity=0.174  Sum_probs=54.9

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH-hhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+.+++.|.+.|++|+++..++.... .+.          ..+...+.+|.++++.+.++ +.  ++|.||-+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~-~~~----------~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVN-AYA----------SYATHAVIANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHH-HTT----------TTCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHH-HHH----------HhCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence            4599999999999999999999999887732 232          25677889999999998877 55  8898887766


Q ss_pred             CC
Q 024575           82 RE   83 (265)
Q Consensus        82 ~~   83 (265)
                      .+
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            54

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.49  E-value=3.5e-05  Score=51.93  Aligned_cols=69  Identities=19%  Similarity=0.309  Sum_probs=53.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|.+.|++|+++.++++... .+.        + ..+..++.+|.++++.+.++-- .+.|.++-+...
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~-~~~--------~-~~~~~vi~Gd~~~~~~l~~~~i-~~a~~vv~~t~~   75 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICK-KAS--------A-EIDALVINGDCTKIKTLEDAGI-EDADMYIAVTGK   75 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH--------H-HCSSEEEESCTTSHHHHHHTTT-TTCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhh-hhh--------h-hhhhhhccCcccchhhhhhcCh-hhhhhhcccCCc
Confidence            4499999999999999999999999876521 111        1 2378899999999999988743 288998887654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.27  E-value=0.00021  Score=50.85  Aligned_cols=95  Identities=16%  Similarity=0.254  Sum_probs=63.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.....|.+|+++++++++. +.+.          ..+...+ .|..+   .+.+.+.....++|+||
T Consensus        36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~~~~----------~~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLK----------QIGFDAA-FNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH----------HTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             EeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-HHHH----------hhhhhhh-cccccccHHHHHHHHhhcCCCceeE
Confidence            58999999999999999999999999987652 1111          1233322 23333   34445555556899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEecceee
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSSAGVY  109 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~~~  109 (265)
                      ++.|.  ......++.++...+++.++....|
T Consensus       104 D~vG~--~~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         104 DNVGG--EFLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             ESSCH--HHHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             EecCc--hhhhhhhhhccCCCeEEeecceeec
Confidence            99873  4566667777744577776655443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.00042  Score=44.76  Aligned_cols=64  Identities=13%  Similarity=-0.006  Sum_probs=51.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      |+|.+|+-++....+.|+++++++.+++.....+             .-.++.+|+.|.+.+.++....++|+|-.-
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~E   81 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPE   81 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence            4699999999999999999999999887743322             235788999999999998865578998643

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00029  Score=47.93  Aligned_cols=75  Identities=20%  Similarity=0.255  Sum_probs=43.3

Q ss_pred             CCccccchHHHHHHHHHcC----CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.+++.|+++.    .+++++.++..... ...          ...-.....+..+.+.    +.  ++|++
T Consensus         7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~-~~~----------~~~~~~~~~~~~~~~~----~~--~~Div   69 (146)
T d1t4ba1           7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQA-APS----------FGGTTGTLQDAFDLEA----LK--ALDII   69 (146)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB-CCG----------GGTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccc-ccc----------ccCCceeeecccchhh----hh--cCcEE
Confidence            5999999999999888763    36777766544411 111          0111112222333333    34  99999


Q ss_pred             EEcCCCCccchHHHHHhC
Q 024575           77 YDINGREADEVEPILDAL   94 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~   94 (265)
                      |.+++.  .....+...+
T Consensus        70 F~a~~~--~~s~~~~~~~   85 (146)
T d1t4ba1          70 VTCQGG--DYTNEIYPKL   85 (146)
T ss_dssp             EECSCH--HHHHHHHHHH
T ss_pred             EEecCc--hHHHHhhHHH
Confidence            999863  3344455444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.16  E-value=0.00024  Score=50.15  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=49.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|.+|+.+++.|.++||+|++..|+.++......+         .........+..+.......+.  ..|.++.+..
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~---------~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc---------ccccccccccccchhhhHhhhh--ccceeEeecc
Confidence            459999999999999999999999998874222111         2344445556666677777787  7888887654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.01  E-value=0.00024  Score=49.98  Aligned_cols=87  Identities=15%  Similarity=0.164  Sum_probs=56.0

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|...++.+...|.+|+++++++++. +...          .-+++.+ .|..+...  +.-...++|+||++.
T Consensus        34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-~~~~----------~lGa~~~-i~~~~~~~--~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPL----------ALGAEEA-ATYAEVPE--RAKAWGGLDLVLEVR   99 (171)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHH----------HTTCSEE-EEGGGHHH--HHHHTTSEEEEEECS
T ss_pred             Eeccccchhhhhhhhccccccccccccccccc-cccc----------cccccee-eehhhhhh--hhhcccccccccccc
Confidence            58999999999999888999999999886552 1111          1233322 24444332  222334899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEe
Q 024575           81 GREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      |.   .....++.++...+++.++
T Consensus       100 G~---~~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         100 GK---EVEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             CT---THHHHHTTEEEEEEEEEC-
T ss_pred             ch---hHHHHHHHHhcCCcEEEEe
Confidence            73   3455666666445777665

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.96  E-value=0.0013  Score=46.21  Aligned_cols=93  Identities=18%  Similarity=0.138  Sum_probs=60.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (265)
                      +||+|.+|+..++.+...|.+|+++++++++.. ...          ..+...+ .|..+. ++........++|+||++
T Consensus        38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~-~~~----------~lGa~~v-i~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLR----------VLGAKEV-LAREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHH----------HTTCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             EeccchHHHHHHHHHHHcCCceEEecCchHHHH-HHH----------hccccee-eecchhHHHHHHHhhccCcCEEEEc
Confidence            589999999999999899999999999888731 111          1232222 133221 223334445589999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      .+.  ......++.++...|++.++...
T Consensus       106 vgg--~~~~~~l~~l~~~Griv~~G~~~  131 (176)
T d1xa0a2         106 VGG--RTLATVLSRMRYGGAVAVSGLTG  131 (176)
T ss_dssp             STT--TTHHHHHHTEEEEEEEEECSCCS
T ss_pred             CCc--hhHHHHHHHhCCCceEEEeeccc
Confidence            874  45777788888556888777543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.86  E-value=0.00021  Score=48.63  Aligned_cols=87  Identities=17%  Similarity=0.146  Sum_probs=47.2

Q ss_pred             CCccccchHHHHHHHHHcC---CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||||++|+.+++.|.+++   .++..++.+... .+.+..          ..-.....++.+     ..+.  ++|++|
T Consensus         8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-Gk~i~~----------~~~~~~~~~~~~-----~~~~--~~d~vf   69 (144)
T d2hjsa1           8 VGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMGF----------AESSLRVGDVDS-----FDFS--SVGLAF   69 (144)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEEE----------TTEEEECEEGGG-----CCGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-Ccceee----------ccccchhccchh-----hhhc--cceEEE
Confidence            4999999999999998654   477766554433 111110          011111111111     1234  889999


Q ss_pred             EcCCCCccchHHHHHhCC-CCCcEEEEecce
Q 024575           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss~~  107 (265)
                      .+++.  .........+. ...++|-.|+..
T Consensus        70 ~a~p~--~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          70 FAAAA--EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ecCCc--chhhhhccccccCCceEEeechhh
Confidence            88753  33333443333 556677666643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.80  E-value=0.0018  Score=44.21  Aligned_cols=85  Identities=12%  Similarity=0.187  Sum_probs=49.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH-HHHHHhhcc-CccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAK-GFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~-~~d~vi~   78 (265)
                      +||.|.+|+.+++.|.+.||+|.+.+|+..........         ...+.+...+..... -+.+..... .=.++++
T Consensus        15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA---------NADVVIVSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT---------TCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh---------hccccccccchhhheeeeecccccccCCceEEE
Confidence            36799999999999999999999999987663221110         122222333332222 222333221 2357778


Q ss_pred             cCCCCccchHHHHHhC
Q 024575           79 INGREADEVEPILDAL   94 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~   94 (265)
                      +++....-...+.+.+
T Consensus        86 ~~Svk~~~~~~~~~~~  101 (152)
T d2pv7a2          86 LTSVKREPLAKMLEVH  101 (152)
T ss_dssp             CCSCCHHHHHHHHHHC
T ss_pred             ecccCHHHHHHHHHHc
Confidence            8776555454444443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.80  E-value=0.00016  Score=51.91  Aligned_cols=31  Identities=29%  Similarity=0.418  Sum_probs=28.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +||+|.+|+++++.|++.||+|++.+|++++
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4889999999999999999999999998765

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.80  E-value=0.0016  Score=44.04  Aligned_cols=70  Identities=26%  Similarity=0.229  Sum_probs=44.3

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhcc-ceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|++++..|...+  .++++++.++.+. .        ...-.+.. ...... .....+..+.++  +.|+|+
T Consensus         6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~-~--------a~Dl~~~~~~~~~~~-~~~~~~~~~~~~--~aDivV   73 (144)
T d1mlda1           6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-V--------AADLSHIETRATVKG-YLGPEQLPDCLK--GCDVVV   73 (144)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-H--------HHHHTTSSSSCEEEE-EESGGGHHHHHT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCccceEEEEeccccch-h--------hHHHhhhhhhcCCCe-EEcCCChHHHhC--CCCEEE
Confidence            4889999999999999887  4788888764331 0        00000111 111121 223455566777  999999


Q ss_pred             EcCCC
Q 024575           78 DINGR   82 (265)
Q Consensus        78 ~~a~~   82 (265)
                      .++|.
T Consensus        74 itag~   78 (144)
T d1mlda1          74 IPAGV   78 (144)
T ss_dssp             ECCSC
T ss_pred             ECCCc
Confidence            99986

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.73  E-value=0.0014  Score=46.33  Aligned_cols=91  Identities=16%  Similarity=0.154  Sum_probs=61.6

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++++++++. +.+.          ..++..+ .|..+++   .+.+.....++|+||
T Consensus        32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~----------~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLS----------RLGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHH----------TTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCCcccccchhhccccccceeeecccccc-cccc----------ccccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            58999999999999888899999999876552 2221          1333322 3445543   344444445899999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++.+.  ......++.++...++|.++.
T Consensus       100 d~~g~--~~~~~~~~~l~~~G~~v~~G~  125 (183)
T d1pqwa_         100 NSLAG--EAIQRGVQILAPGGRFIELGK  125 (183)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSC
T ss_pred             ecccc--hHHHHHHHHhcCCCEEEEEcc
Confidence            99983  455667777774467887653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.72  E-value=0.00059  Score=48.11  Aligned_cols=93  Identities=15%  Similarity=0.100  Sum_probs=58.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|..+++.|+++||+|++.+|++++..+....         ........ -....+++.+.+.  .+|.++-+...
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~---------~~~~~~~~-~a~~~~~~~~~~~--~~~~ii~~~~~   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN---------EAKGTKVL-GAHSLEEMVSKLK--KPRRIILLVKA   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT---------TTTTSSCE-ECSSHHHHHHHBC--SSCEEEECSCT
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh---------cccccccc-chhhhhhhhhhhc--ccceEEEecCc
Confidence            569999999999999999999999998763211110         00000011 1235566777777  88888887644


Q ss_pred             Ccc---chHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD---EVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~---~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      ...   ....++..++..+.+|-+||..
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcch
Confidence            311   2234555566556677777644

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0019  Score=45.18  Aligned_cols=90  Identities=11%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|...++.+...|.+|+++++++++. +...          .-+...+ .|.++.+.   +.+.....++|+||
T Consensus        35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~----------~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVL----------QNGAHEV-FNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH----------HTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             EeccccccccccccccccCccccccccccccc-cccc----------ccCcccc-cccccccHHHHhhhhhccCCceEEe
Confidence            48899999999999988999999999876542 1111          1233222 35555443   33444445799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      ++.+.  ......++.++...+++.++
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLAN--VNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ecccH--HHHHHHHhccCCCCEEEEEe
Confidence            99873  45666677777556788765

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.39  E-value=0.0027  Score=43.86  Aligned_cols=99  Identities=10%  Similarity=0.047  Sum_probs=57.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCC--CCChhHHhhhhccceEEEecCCChHHHHHHhhc-------c-C
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K-G   72 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~-~   72 (265)
                      |.|.+|+.+++.|+++||+|.+.+|++.+......  ........+......++..-+.+.+....++..       . .
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~   87 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   87 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence            67999999999999999999999998665211110  000011111223344444444555544444321       1 2


Q ss_pred             ccEEEEcCCCCccchHHHHHhCC-CCCcEE
Q 024575           73 FDVVYDINGREADEVEPILDALP-NLEQFI  101 (265)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~~~~-~~~~~v  101 (265)
                      =++|+++....+.....+.+.++ ..-+|+
T Consensus        88 g~iiid~st~~p~~~~~~~~~~~~~gi~~~  117 (162)
T d3cuma2          88 GTLVLECSTIAPTSARKIHAAARERGLAML  117 (162)
T ss_dssp             TCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHCCCcEE
Confidence            25777777777777777776665 333444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.00097  Score=45.73  Aligned_cols=73  Identities=15%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |-|-+|+.+++.|.+.|++|+++..+++.......       .....++.++.+|.++++.++++-- .+++.||-+...
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~   81 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN   81 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence            55899999999999999999999988754211111       0012579999999999998876544 278999988764


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      .
T Consensus        82 d   82 (153)
T d1id1a_          82 D   82 (153)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.30  E-value=0.0019  Score=44.60  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.+++.|+++||+|++.+|++.+
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~   35 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEA   35 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence            57999999999999999999999998765

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.26  E-value=0.0047  Score=41.70  Aligned_cols=88  Identities=23%  Similarity=0.269  Sum_probs=47.4

Q ss_pred             CCccccchHHHHHHHHHcC----CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +||||++|+.+++.|+++.    .+++.++.+...  ......         .+-.....+..+.+    .+.  ++|+|
T Consensus         6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~--gk~~~~---------~~~~~~~~~~~~~~----~~~--~~Dvv   68 (147)
T d1mb4a1           6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPNF---------GKDAGMLHDAFDIE----SLK--QLDAV   68 (147)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS--SBCCCS---------SSCCCBCEETTCHH----HHT--TCSEE
T ss_pred             ECCccHHHHHHHHHHHhcCCCCceEEEEecccccc--cccccc---------CCcceeeecccchh----hhc--cccEE
Confidence            4999999999999988752    356655544332  111110         11111111222332    345  89999


Q ss_pred             EEcCCCCccchHHHHHhCC--CCC-cEEEEecce
Q 024575           77 YDINGREADEVEPILDALP--NLE-QFIYCSSAG  107 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~--~~~-~~v~~Ss~~  107 (265)
                      |.+.+.  .....+...+.  +.+ .+|=.|+..
T Consensus        69 F~alp~--~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          69 ITCQGG--SYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             EEecCc--hHHHHHhHHHHHcCCceEEEeCCccc
Confidence            999764  33444554433  333 366666644

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.0081  Score=43.71  Aligned_cols=62  Identities=11%  Similarity=0.066  Sum_probs=45.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH----HHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF----VKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~~~~~d~vi~   78 (265)
                      +||.+|.+|++.+..+|++|+++........              ..++..+...  ..++    +.+.+.  +.|++|+
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~--t~~~m~~~~~~~~~--~~D~~i~   91 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVM--TALEMEAAVNASVQ--QQNIFIG   91 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECC--SHHHHHHHHHHHGG--GCSEEEE
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceeh--hhHHHHHHHHhhhc--cceeEee
Confidence            6899999999999999999999987665411              1355555443  3333    334445  8999999


Q ss_pred             cCCC
Q 024575           79 INGR   82 (265)
Q Consensus        79 ~a~~   82 (265)
                      +|+.
T Consensus        92 aAAv   95 (223)
T d1u7za_          92 CAAV   95 (223)
T ss_dssp             CCBC
T ss_pred             eech
Confidence            9886

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0081  Score=41.95  Aligned_cols=91  Identities=19%  Similarity=0.169  Sum_probs=60.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChH---HHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (265)
                      +||+|.+|..+++.+...|.+|+++++++++. +...          ..+...+ .|.++++   .+.++-...++|+|+
T Consensus        35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~----------~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSAL----------KAGAWQV-INYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHH----------HHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EccccccchHHHHHHHHhCCeEeecccchHHH-HHHH----------hcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEE
Confidence            58999999999999988999999999998772 1111          1233322 3555543   344443445799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ++.+.  ......++.++...+++..+.
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~~v~~g~  128 (179)
T d1qora2         103 DSVGR--DTWERSLDCLQRRGLMVSFGN  128 (179)
T ss_dssp             ECSCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred             eCccH--HHHHHHHHHHhcCCeeeeccc
Confidence            99874  455666777763346665543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.97  E-value=0.0015  Score=46.12  Aligned_cols=86  Identities=12%  Similarity=0.050  Sum_probs=50.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|..++..|.++||+|.+++|++.... .+....  ......+.............++.+.++  ++|+||-+.. 
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~-   81 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIK-EIQDRG--AIIAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP-   81 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHT--SEEEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC--CCchhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence            4599999999999999999999999865421 110000  000000111112221111234567777  9999999754 


Q ss_pred             CccchHHHHHhCC
Q 024575           83 EADEVEPILDALP   95 (265)
Q Consensus        83 ~~~~~~~l~~~~~   95 (265)
                       ......+++.++
T Consensus        82 -~~~~~~~~~~i~   93 (184)
T d1bg6a2          82 -AIHHASIAANIA   93 (184)
T ss_dssp             -GGGHHHHHHHHG
T ss_pred             -hhHHHHHHHHhh
Confidence             445666666644

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.00069  Score=48.45  Aligned_cols=102  Identities=15%  Similarity=0.199  Sum_probs=58.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhc-cc-----------eEEEecCCChHHHHHHhhc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KI-----------LHLKGDRKDYDFVKSSLSA   70 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~D~~~~~~~~~~~~~   70 (265)
                      |+|.+|+.++..++..|++|++.+++++....... ...+.+..... +.           .-....+.-..++.+++. 
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~-~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~~a~~-   88 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK-GIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVH-   88 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTT-
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh-hHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhHhhhc-
Confidence            45999999999999999999999998765211110 00000000000 00           000000111123445666 


Q ss_pred             cCccEEEEcCCCCccchHHHHHhCC--CCCcEEEEecce
Q 024575           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~l~~~~~--~~~~~v~~Ss~~  107 (265)
                       ++|.|+-+...+...=+.++..+.  -...-|+.|+.+
T Consensus        89 -~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          89 -STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             -SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             -ccceehhhcccchhHHHHHHHHHhhhcccCceeeccCc
Confidence             899999999888777777777766  233445555443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.72  E-value=0.017  Score=37.91  Aligned_cols=80  Identities=10%  Similarity=0.139  Sum_probs=48.5

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhh---ccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~~~d~vi   77 (265)
                      .|++|.+|+.+++.+.++++++++..-....  ..+            .+.. +-.|++.++.+.+.++   +.+.-.|+
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--~~~------------~~~D-VvIDFS~p~~~~~~l~~~~~~~~p~Vi   70 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EEL------------DSPD-VVIDFSSPEALPKTVDLCKKYRAGLVL   70 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EEC------------SCCS-EEEECSCGGGHHHHHHHHHHHTCEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--HHh------------ccCC-EEEEecCHHHHHHHHHHHHhcCCCEEE
Confidence            4899999999999888889988765422211  111            1111 4557777665544332   24666777


Q ss_pred             EcCCCCccchHHHHHhCC
Q 024575           78 DINGREADEVEPILDALP   95 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~   95 (265)
                      =+.|.+.+....+-++++
T Consensus        71 GTTG~~~~~~~~i~~~ak   88 (128)
T d1vm6a3          71 GTTALKEEHLQMLRELSK   88 (128)
T ss_dssp             CCCSCCHHHHHHHHHHTT
T ss_pred             EcCCCCHHHHHHHHHHHh
Confidence            777766555555555544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.65  E-value=0.0019  Score=44.93  Aligned_cols=92  Identities=18%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh-HHHHHHhhccCccEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (265)
                      +||+|.+|...++.....|.+|+++++++++.. .+        .  ..+...+ .|..+. ..........++|+||++
T Consensus        30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~-~~--------~--~lGad~v-i~~~~~~~~~~~~~~~~gvd~vid~   97 (167)
T d1tt7a2          30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-YL--------K--QLGASEV-ISREDVYDGTLKALSKQQWQGAVDP   97 (167)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-HH--------H--HHTCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             eCCcchHHHHHHHHHHHcCCceEEEecCHHHHH-HH--------H--hhcccce-EeccchhchhhhcccCCCceEEEec
Confidence            489999999999888888999999999987731 11        1  1233322 122110 001111222479999999


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEecc
Q 024575           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      .+-  ......++.++...+++.++..
T Consensus        98 vgg--~~~~~~~~~l~~~G~iv~~G~~  122 (167)
T d1tt7a2          98 VGG--KQLASLLSKIQYGGSVAVSGLT  122 (167)
T ss_dssp             CCT--HHHHHHHTTEEEEEEEEECCCS
T ss_pred             CcH--HHHHHHHHHhccCceEEEeecc
Confidence            763  3445566666644577766543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.63  E-value=0.0032  Score=43.57  Aligned_cols=29  Identities=28%  Similarity=0.405  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|+.+++.|.+.||+|++.+|+++.
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~   35 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQST   35 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            56999999999999999999999998654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.58  E-value=0.0094  Score=42.04  Aligned_cols=95  Identities=15%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             CCccccchHHHHHHHHHcCCeEEE-EEcCCCccccCCCCCChhHHhhhhccceEEEecCCCh---HHHHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~d~v   76 (265)
                      +||+|.+|+..++.+...|.++++ .++++++... +        .. ..+.. ...|..++   +.+++. ...++|+|
T Consensus        37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~-l--------~~-~~gad-~vi~~~~~~~~~~~~~~-~~~GvDvv  104 (187)
T d1vj1a2          37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF-L--------TS-ELGFD-AAVNYKTGNVAEQLREA-CPGGVDVY  104 (187)
T ss_dssp             SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHH-H--------HH-HSCCS-EEEETTSSCHHHHHHHH-CTTCEEEE
T ss_pred             ECCCchhhHHHHHHHHHcCCcceecccchHHHHhh-h--------hh-cccce-EEeeccchhHHHHHHHH-hccCceEE
Confidence            589999999999998888975544 4554433111 1        00 12222 22344432   223333 33589999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEecceee
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCSSAGVY  109 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~~~  109 (265)
                      |++.|.  ......++.++...+++.++..+.|
T Consensus       105 ~D~vGg--~~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         105 FDNVGG--DISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEEC------
T ss_pred             EecCCc--hhHHHHhhhccccccEEEecccccc
Confidence            999873  3455566666655678877765543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.54  E-value=0.0051  Score=36.45  Aligned_cols=31  Identities=26%  Similarity=0.251  Sum_probs=28.3

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      +||+|.+|...++.+...|++|+++++++++
T Consensus        38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          38 TGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            5999999999999888889999999998766

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.54  E-value=0.023  Score=39.76  Aligned_cols=79  Identities=16%  Similarity=0.093  Sum_probs=55.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|++.+|.+.....                        .-.+++.+++.  .+|+|+.+...
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------------------------~~~~~l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGPW------------------------RFTNSLEEALR--EARAAVCALPL  102 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSSS------------------------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccccccccceeeeeccccccccccccccccce------------------------eeeechhhhhh--ccchhhccccc
Confidence            56899999999999999999999887654210                        01124567888  99999987766


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEecce
Q 024575           83 EADE----VEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~~----~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +...    ....++.++....||.+|-..
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~  131 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGRAE  131 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             ccccccccccceeeeccccceEEeccccc
Confidence            4321    245666677656777777443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.46  E-value=0.0018  Score=43.82  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=26.1

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCC
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA   30 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~   30 (265)
                      +||+|.+|+.++..|+.++  .+++++++++.
T Consensus         6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            4889999999999999988  59999998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.46  E-value=0.0023  Score=43.66  Aligned_cols=82  Identities=11%  Similarity=0.026  Sum_probs=50.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|+++|++|++..+++.......           ..++.+.       ++..++++  ++|+||-+...
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-----------~~~~~~~-------~~~~e~~~--~~diIi~~v~~   66 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-----------ARTVGVT-------ETSEEDVY--SCPVVISAVTP   66 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-----------HHHHTCE-------ECCHHHHH--TSSEEEECSCG
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-----------hhccccc-------ccHHHHHh--hcCeEEEEecC
Confidence            5799999999999999999998887766532111           1122211       12335666  89999988754


Q ss_pred             CccchHHHHHh-CC-CCCcEEEEecc
Q 024575           83 EADEVEPILDA-LP-NLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~~~~~l~~~-~~-~~~~~v~~Ss~  106 (265)
                        .....++.. .. ..+.+|-+||.
T Consensus        67 --~~~~~~~~~~~~~~~~~~id~st~   90 (152)
T d1i36a2          67 --GVALGAARRAGRHVRGIYVDINNI   90 (152)
T ss_dssp             --GGHHHHHHHHHTTCCSEEEECSCC
T ss_pred             --chHHHHHHhhcccCCceeeccCcC
Confidence              233333333 22 33455556654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.46  E-value=0.046  Score=37.51  Aligned_cols=91  Identities=12%  Similarity=0.057  Sum_probs=57.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC--ChHHHHHHhh---ccCccEEE
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLS---AKGFDVVY   77 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~---~~~~d~vi   77 (265)
                      |+|.+|...++.+...|.+|+++++++.+.. ..        .++ ..-..+..|-.  +.+...+.+.   ..++|+||
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~-~a--------~~~-ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLE-VA--------KNC-GADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------HHT-TCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHH-HH--------HHc-CCcEEEeccccccccchhhhhhhcccccCCceee
Confidence            4689999999988888999999999877621 11        010 11122333322  3334444433   23799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +++|. .......++.++...++++++
T Consensus       104 d~~g~-~~~~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2         104 DCSGN-EKCITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             ecCCC-hHHHHHHHHHHhcCCceEEEe
Confidence            99874 234556678888666888776

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.45  E-value=0.0017  Score=44.56  Aligned_cols=20  Identities=20%  Similarity=0.370  Sum_probs=17.9

Q ss_pred             CCccccchHHHHHHHHHcCC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH   20 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~   20 (265)
                      +||||++|..|++.|.++.+
T Consensus         7 vGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           7 VGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             ETTTSHHHHHHHHHHHTCCS
T ss_pred             ECCCcHHHHHHHHHHHcCCC
Confidence            49999999999999988864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.43  E-value=0.013  Score=40.25  Aligned_cols=30  Identities=30%  Similarity=0.451  Sum_probs=27.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |.|.+|+.++..|.+.|++|.++.|++...
T Consensus         7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           7 GCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            349999999999999999999999998763

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.41  E-value=0.0037  Score=44.34  Aligned_cols=96  Identities=13%  Similarity=0.179  Sum_probs=58.8

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEe---cCCCh-HHHHHHhh--ccCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKG---DRKDY-DFVKSSLS--AKGF   73 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---D~~~~-~~~~~~~~--~~~~   73 (265)
                      +||+|.+|...++.....|.+|++++|++++..+..     ..+.+  .+. .++.-   |..+. +.+.+...  ..++
T Consensus        36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~-----~~~~~--lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKE--LGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHH--HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHH-----hhhhh--ccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            489999999999988888999999998876632111     00111  222 22322   22121 12333322  2369


Q ss_pred             cEEEEcCCCCccchHHHHHhCCCCCcEEEEec
Q 024575           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      |+||++.|  .......++.++...++|.++.
T Consensus       109 dvv~D~vg--~~~~~~~~~~l~~~G~~v~~G~  138 (189)
T d1gu7a2         109 KLALNCVG--GKSSTGIARKLNNNGLMLTYGG  138 (189)
T ss_dssp             EEEEESSC--HHHHHHHHHTSCTTCEEEECCC
T ss_pred             eEEEECCC--cchhhhhhhhhcCCcEEEEECC
Confidence            99999977  3445677888886668886653

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.38  E-value=0.003  Score=44.61  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=22.5

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTR   27 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r   27 (265)
                      +||||++|+.|++.|.++. .++..+..
T Consensus        11 lGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1          11 LGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             ESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            4999999999999999985 57766653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.0099  Score=41.55  Aligned_cols=91  Identities=19%  Similarity=0.161  Sum_probs=59.2

Q ss_pred             CCccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a   80 (265)
                      +||+|.+|...++.+...|.+|++++|++++.. .+.          ..+...+ .|..+.+. .+.+.....|.++++.
T Consensus        38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~-~~~----------~lGad~v-i~~~~~~~-~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHE-YLK----------SLGASRV-LPRDEFAE-SRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHH----------HHTEEEE-EEGGGSSS-CCSSCCCCEEEEEESS
T ss_pred             EEccccchHHHHHHHHHcCCCeEEEecchhHHH-HHH----------hhccccc-cccccHHH-HHHHHhhcCCeeEEEc
Confidence            589999999999999999999999999887721 111          1233322 23333222 2334444689999987


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEecc
Q 024575           81 GREADEVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +.  ......++.++...++|.++..
T Consensus       105 gg--~~~~~~l~~l~~~Griv~~G~~  128 (177)
T d1o89a2         105 GD--KVLAKVLAQMNYGGCVAACGLA  128 (177)
T ss_dssp             CH--HHHHHHHHTEEEEEEEEECCCT
T ss_pred             ch--HHHHHHHHHhccccceEeeccc
Confidence            64  3355666666644577777644

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.31  E-value=0.0037  Score=42.63  Aligned_cols=78  Identities=14%  Similarity=0.071  Sum_probs=51.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|.+|+++++.|.+.|+++++..|++++.. .+        .+ ..++..       ..+..++++  +.|+||-+.- 
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~-~l--------~~-~~g~~~-------~~~~~~~~~--~~dvIilavk-   66 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSK-EI--------AE-QLALPY-------AMSHQDLID--QVDLVILGIK-   66 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHH-HH--------HH-HHTCCB-------CSSHHHHHH--TCSEEEECSC-
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHH-hh--------cc-ccceee-------echhhhhhh--ccceeeeecc-
Confidence            6799999999999999999999988866521 11        00 112221       123455666  8999998753 


Q ss_pred             CccchHHHHHhCCCCCcEE
Q 024575           83 EADEVEPILDALPNLEQFI  101 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v  101 (265)
                       ++....+++.++..+.+|
T Consensus        67 -p~~~~~vl~~l~~~~~ii   84 (152)
T d2ahra2          67 -PQLFETVLKPLHFKQPII   84 (152)
T ss_dssp             -GGGHHHHHTTSCCCSCEE
T ss_pred             -hHhHHHHhhhcccceeEe
Confidence             566677777766444444

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.27  E-value=0.0023  Score=39.29  Aligned_cols=65  Identities=15%  Similarity=0.062  Sum_probs=43.5

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      ||+|..|  |++.|.++|+.|.+.++.+....+.+.          ..++.+..+  .+.+.    +.  ++|.||...+
T Consensus        10 gG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~g--h~~~~----i~--~~d~vV~SsA   69 (89)
T d1j6ua1          10 GGIGMSA--VALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVP--HSADN----WY--DPDLVIKTPA   69 (89)
T ss_dssp             TSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESS--CCTTS----CC--CCSEEEECTT
T ss_pred             CHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEee--ecccc----cC--CCCEEEEecC
Confidence            5556555  788899999999999988665433332          356776554  23332    23  7899999988


Q ss_pred             CCccc
Q 024575           82 READE   86 (265)
Q Consensus        82 ~~~~~   86 (265)
                      ...+.
T Consensus        70 I~~~n   74 (89)
T d1j6ua1          70 VRDDN   74 (89)
T ss_dssp             CCTTC
T ss_pred             cCCCC
Confidence            75443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.18  E-value=0.025  Score=39.53  Aligned_cols=95  Identities=16%  Similarity=0.148  Sum_probs=56.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc-ccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|..|.+++..|.++|++|.+.+|..+.. .+.+......  .  ..+......++.-.+++.++++  +.|+|+.+..
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~--~--~~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~avp   80 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREH--P--RLGVKLNGVEIFWPEQLEKCLE--NAEVVLLGVS   80 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCB--T--TTTBCCCSEEEECGGGHHHHHT--TCSEEEECSC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhh--h--hhcchhccccccccccHHHHHh--ccchhhcccc
Confidence            569999999999999999999999854331 1111000000  0  0011111122333566778888  9999998764


Q ss_pred             CCccchHHHHHhCC---CCCcEEEEec
Q 024575           82 READEVEPILDALP---NLEQFIYCSS  105 (265)
Q Consensus        82 ~~~~~~~~l~~~~~---~~~~~v~~Ss  105 (265)
                        ....+.+++.+.   ..+.++.++.
T Consensus        81 --s~~~~~~~~~l~~~l~~~~ii~~tk  105 (180)
T d1txga2          81 --TDGVLPVMSRILPYLKDQYIVLISK  105 (180)
T ss_dssp             --GGGHHHHHHHHTTTCCSCEEEECCC
T ss_pred             --hhhhHHHHHhhccccccceeccccc
Confidence              567777777655   3344554443

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.076  Score=36.44  Aligned_cols=90  Identities=12%  Similarity=0.101  Sum_probs=58.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccce-EEEecCCChHHHHHHhh---ccCccEEE
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLS---AKGFDVVY   77 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~---~~~~d~vi   77 (265)
                      |.|.+|...+..+...|. +|++.++++.+.. .         .. .-+++ ++..+-.+.....+.+.   ..++|+||
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~---------a~-~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS-K---------AK-EIGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-H---------HH-HTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHH-H---------HH-HhCCcccccccccccccccccccccCCCCceEEE
Confidence            459999999999888897 7999888866621 1         10 12333 33333344444444332   24799999


Q ss_pred             EcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           78 DINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      .+.|. .......++.++...++++++
T Consensus       103 d~~G~-~~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         103 ECTGA-EASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             eccCC-chhHHHHHHHhcCCCEEEEEe
Confidence            99885 234556677788666888776

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.02  E-value=0.024  Score=39.66  Aligned_cols=75  Identities=16%  Similarity=0.123  Sum_probs=52.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|..|++++..|.+.|. ++++..|+++...+... . ..++. ..-.......++.+.+.+.+.+.  .+|+|||+..
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~-l-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp   99 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA-F-AQRVN-ENTDCVVTVTDLADQQAFAEALA--SADILTNGTK   99 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH-H-HHHHH-HHSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH-H-HHHHH-hhcCcceEeeecccccchhhhhc--ccceeccccC
Confidence            568899999999999985 78888888765321110 0 00111 11234456788889998888888  9999999976


Q ss_pred             C
Q 024575           82 R   82 (265)
Q Consensus        82 ~   82 (265)
                      .
T Consensus       100 ~  100 (182)
T d1vi2a1         100 V  100 (182)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.89  E-value=0.0089  Score=41.68  Aligned_cols=90  Identities=18%  Similarity=0.170  Sum_probs=49.1

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +||||++|+.+++.|.++. .++..+..+... .+.+        ....+.. .-......+.+   ...+  ++|+||.
T Consensus         7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~a-G~~i--------~~~~p~~~~~~~~~~~~~~---~~~~--~~dvvf~   72 (176)
T d1vkna1           7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKL--------EEIFPSTLENSILSEFDPE---KVSK--NCDVLFT   72 (176)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBH--------HHHCGGGCCCCBCBCCCHH---HHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCceEEEeeccccC-CCcc--------cccCchhhccccccccCHh---Hhcc--ccceEEE
Confidence            4999999999999999875 577776544332 1111        1111111 00011112333   3444  8999998


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEecce
Q 024575           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +.+...  ...++... ...++|=.|+..
T Consensus        73 a~p~~~--s~~~~~~~-~~~~VIDlSadf   98 (176)
T d1vkna1          73 ALPAGA--SYDLVREL-KGVKIIDLGADF   98 (176)
T ss_dssp             CCSTTH--HHHHHTTC-CSCEEEESSSTT
T ss_pred             ccccHH--HHHHHHhh-ccceEEecCccc
Confidence            876533  23333333 334677777654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.76  E-value=0.019  Score=35.51  Aligned_cols=65  Identities=20%  Similarity=0.274  Sum_probs=43.3

Q ss_pred             CccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      ||+|.  ++|++.|.++|++|.+.++......+.+.          ..++.+..++-  ++.    +.  ++|.||...+
T Consensus        17 gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~L~----------~~Gi~v~~g~~--~~~----i~--~~d~vV~S~A   76 (96)
T d1p3da1          17 GGAGM--SGIAEILLNEGYQISGSDIADGVVTQRLA----------QAGAKIYIGHA--EEH----IE--GASVVVVSSA   76 (96)
T ss_dssp             TSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHHHH----------HTTCEEEESCC--GGG----GT--TCSEEEECTT
T ss_pred             CHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhHHH----------HCCCeEEECCc--ccc----CC--CCCEEEECCC
Confidence            45555  56799999999999999988655332222          25777665543  222    33  8899999888


Q ss_pred             CCccc
Q 024575           82 READE   86 (265)
Q Consensus        82 ~~~~~   86 (265)
                      ...+.
T Consensus        77 I~~~n   81 (96)
T d1p3da1          77 IKDDN   81 (96)
T ss_dssp             SCTTC
T ss_pred             cCCCC
Confidence            75443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.71  E-value=0.018  Score=40.20  Aligned_cols=27  Identities=19%  Similarity=0.322  Sum_probs=22.4

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEc
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR   27 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r   27 (265)
                      +||||++|+.|++.|.++ .+++..+..
T Consensus         7 iGATGyvG~eLlrlL~~HP~~ei~~l~~   34 (179)
T d2g17a1           7 VGASGYAGAELVSYVNRHPHMTITALTV   34 (179)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence            499999999999999998 467766543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=94.63  E-value=0.038  Score=38.51  Aligned_cols=89  Identities=11%  Similarity=0.125  Sum_probs=55.8

Q ss_pred             CccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC--hH----HHHHHhhccCcc
Q 024575            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YD----FVKSSLSAKGFD   74 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~----~~~~~~~~~~~d   74 (265)
                      |+ |.+|...++.+...|. +|+++++++.+. +...          .-+...+ .|..+  ..    .+.+.....++|
T Consensus        36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~----------~lGa~~v-i~~~~~~~~~~~~~i~~~~~~~g~D  102 (182)
T d1vj0a2          36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAE----------EIGADLT-LNRRETSVEERRKAIMDITHGRGAD  102 (182)
T ss_dssp             CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHH----------HTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CC-Cccchhheecccccccccccccccccccc-cccc----------cccceEE-EeccccchHHHHHHHHHhhCCCCce
Confidence            54 8999999999988896 799999987662 1111          1233221 23332  22    233333344799


Q ss_pred             EEEEcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +||.+.|.. ......++.++...+++.++
T Consensus       103 vvid~vG~~-~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         103 FILEATGDS-RALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             EEEECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             EEeecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence            999998762 34566677777446777765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.57  E-value=0.0062  Score=42.20  Aligned_cols=87  Identities=13%  Similarity=0.066  Sum_probs=53.3

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC-hHHHHHHhhccCccEEEEcCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      +|.+|...++.+...|.+|+++++++++.. ..        .  .-+...+. |..+ .+..+....  ++|.++.+.+.
T Consensus        36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a--------~--~lGa~~~i-~~~~~~~~~~~~~~--~~d~vi~~~~~  101 (168)
T d1piwa2          36 LGGIGSMGTLISKAMGAETYVISRSSRKRE-DA--------M--KMGADHYI-ATLEEGDWGEKYFD--TFDLIVVCASS  101 (168)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HH--------H--HHTCSEEE-EGGGTSCHHHHSCS--CEEEEEECCSC
T ss_pred             CCCcchhHHHHhhhccccccccccchhHHH-Hh--------h--ccCCcEEe-eccchHHHHHhhhc--ccceEEEEecC
Confidence            489999998888778999999999877621 11        1  12333222 3333 333344444  89999999775


Q ss_pred             Cccc-hHHHHHhCCCCCcEEEEe
Q 024575           83 EADE-VEPILDALPNLEQFIYCS  104 (265)
Q Consensus        83 ~~~~-~~~l~~~~~~~~~~v~~S  104 (265)
                      .... ....++.++...+++.++
T Consensus       102 ~~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         102 LTDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             STTCCTTTGGGGEEEEEEEEECC
T ss_pred             CccchHHHHHHHhhccceEEEec
Confidence            4332 334455566445677665

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=94.46  E-value=0.056  Score=37.04  Aligned_cols=86  Identities=14%  Similarity=0.136  Sum_probs=57.4

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (265)
                      .|.+|...++.+...|.+++++++++++. +...          .-+... ..|..+.+......+  ++|++|.+.+..
T Consensus        39 aG~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~----------~lGad~-~i~~~~~~~~~~~~~--~~D~vid~~g~~  104 (168)
T d1uufa2          39 IGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAK----------ALGADE-VVNSRNADEMAAHLK--SFDFILNTVAAP  104 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH----------HHTCSE-EEETTCHHHHHTTTT--CEEEEEECCSSC
T ss_pred             cchHHHHHHHHhhcccccchhhccchhHH-HHHh----------ccCCcE-EEECchhhHHHHhcC--CCceeeeeeecc
Confidence            48899999988888899999999877652 1111          123332 246666665555555  899999998753


Q ss_pred             ccchHHHHHhCCCCCcEEEEe
Q 024575           84 ADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        84 ~~~~~~l~~~~~~~~~~v~~S  104 (265)
                       ......++.++...+++.++
T Consensus       105 -~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         105 -HNLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             -CCHHHHHTTEEEEEEEEECC
T ss_pred             -hhHHHHHHHHhcCCEEEEec
Confidence             34555566666445777665

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=94.35  E-value=0.0035  Score=43.13  Aligned_cols=63  Identities=19%  Similarity=0.163  Sum_probs=43.2

Q ss_pred             cccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      +|-+|+.+++.|.+.|. ++.+..|+..+.. .+.        . .-+..     ..+.+++.+.+.  ++|+||.+.+.
T Consensus        32 aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~-~l~--------~-~~~~~-----~~~~~~~~~~l~--~~Divi~atss   94 (159)
T d1gpja2          32 AGEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELA--------R-DLGGE-----AVRFDELVDHLA--RSDVVVSATAA   94 (159)
T ss_dssp             CCHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHH--------H-HHTCE-----ECCGGGHHHHHH--TCSEEEECCSS
T ss_pred             CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHH-HHH--------H-hhhcc-----cccchhHHHHhc--cCCEEEEecCC
Confidence            49999999999999997 6888888755521 111        0 01222     224466777888  99999999775


Q ss_pred             C
Q 024575           83 E   83 (265)
Q Consensus        83 ~   83 (265)
                      .
T Consensus        95 ~   95 (159)
T d1gpja2          95 P   95 (159)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.27  E-value=0.025  Score=40.12  Aligned_cols=80  Identities=14%  Similarity=0.076  Sum_probs=53.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|++.++.......                .     +....+++.+++.  ..|+|+.+...
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~----------------~-----~~~~~~~l~~~l~--~sDii~~~~pl  106 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFRNPELE----------------K-----KGYYVDSLDDLYK--QADVISLHVPD  106 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----------------H-----TTCBCSCHHHHHH--HCSEEEECSCC
T ss_pred             cccccchhHHHhHhhhcccccccCcccccccc----------------c-----ceeeecccccccc--ccccccccCCc
Confidence            57999999999998889999998876443110                0     0112345777888  88988877665


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEec
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +..    -....++.+++...||.+|=
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cccccccccHHHHhhhCCccEEEecCc
Confidence            432    12455666775566666664

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.083  Score=37.00  Aligned_cols=81  Identities=16%  Similarity=0.047  Sum_probs=55.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|..-|.+|+..++.......               ..       ...+++.++++  ..|+|+.+...
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---------------~~-------~~~~~l~ell~--~sDii~i~~pl  106 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---------------NA-------TQVQHLSDLLN--MSDVVSLHVPE  106 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---------------TC-------EECSCHHHHHH--HCSEEEECCCS
T ss_pred             ecccchhhhhhhcccccceEeeccccccchhh---------------hh-------hhhhhHHHHHh--hccceeecccC
Confidence            67999999999999889999999886544211               10       11135667888  88998877665


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEecce
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss~~  107 (265)
                      +..    -....++.++....||.+|-..
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~aRG~  135 (188)
T d1sc6a1         107 NPSTKNMMGAKEISLMKPGSLLINASRGT  135 (188)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCSS
T ss_pred             CcchhhhccHHHHhhCCCCCEEEEcCcHH
Confidence            432    2356777777656677766433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=94.16  E-value=0.0079  Score=40.36  Aligned_cols=28  Identities=11%  Similarity=0.125  Sum_probs=23.8

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcC
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRG   28 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~   28 (265)
                      +||+|.+|+.++..|..++.  ++++++.+
T Consensus         6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           6 VGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             ECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            48899999999999999873  78888764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.12  E-value=0.0056  Score=43.26  Aligned_cols=96  Identities=15%  Similarity=0.152  Sum_probs=54.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHH------------HHhhc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK------------SSLSA   70 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~------------~~~~~   70 (265)
                      |+|.+|+.++..++..|++|++++++++........ ....+......      .....+...            +.+. 
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~-i~~~l~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~-   82 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAE-AAKLLVGRVDK------GRMTPAKMAEVLNGIRPTLSYGDFG-   82 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-HHHHHHHHHTT------TSSCHHHHHHHHHHEEEESSSTTGG-
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhh-hhhhHHhhhcc------cccchhhhhhhhceeeccccccccc-
Confidence            459999999999999999999999987552111100 00000000000      000111111            1233 


Q ss_pred             cCccEEEEcCCCCccchHHHHHhCC--CCCcEEEEecce
Q 024575           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~l~~~~~--~~~~~v~~Ss~~  107 (265)
                       ++|.||.+...+...-+.++..+.  ..+..|+.|+.+
T Consensus        83 -~adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS  120 (186)
T d1wdka3          83 -NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTS  120 (186)
T ss_dssp             -GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred             -ccceeeeeecchHHHHHHHHHHHHhhcCCCeeEEeccc
Confidence             789999998888777677777655  223344444433

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.93  E-value=0.052  Score=37.57  Aligned_cols=89  Identities=12%  Similarity=0.034  Sum_probs=56.0

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCC---hHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|...++.+...|. +|+++++++.+. +..         . .-+... ..|..+   .+.+.+.....++|+||.
T Consensus        35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-~~a---------~-~lGa~~-~i~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICV-EAA---------K-FYGATD-ILNYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             CCSHHHHHHHHHHHTTTCSCEEEECCCHHHH-HHH---------H-HHTCSE-EECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             cCCcchhhhhhhhhcccccccccccchhhhH-HHH---------H-hhCccc-cccccchhHHHHHHHHhhccCcceEEE
Confidence            359999999988888886 788888876552 111         1 123221 234443   234455554457999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           79 INGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      ++|.. ......++.++...+++.++
T Consensus       103 ~~g~~-~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         103 AGGGS-ETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             CSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             ccCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            99853 33455677777556777765

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.012  Score=40.50  Aligned_cols=90  Identities=11%  Similarity=0.080  Sum_probs=50.2

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEEc-CCCcccc-CCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR-GKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (265)
                      .|++|.+|+.+++.+.+. +.++++..- ....... ...+...    ....++. +.      +++...+.  .+|+||
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~----~~~~~~~-~~------~~~~~~~~--~~DViI   76 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAG----AGKTGVT-VQ------SSLDAVKD--DFDVFI   76 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSS----SSCCSCC-EE------SCSTTTTT--SCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhc----cccCCce-ee------ccHHHHhc--ccceEE
Confidence            589999999999999886 567766553 3322111 1111000    0001111 11      22234555  899999


Q ss_pred             EcCCCCccchHHHHHhCC-CCCcEEEEec
Q 024575           78 DINGREADEVEPILDALP-NLEQFIYCSS  105 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~-~~~~~v~~Ss  105 (265)
                      .+..  +..+...++.|. ....+|.=+|
T Consensus        77 DFs~--p~~~~~~~~~a~~~~~~~ViGTT  103 (162)
T d1diha1          77 DFTR--PEGTLNHLAFCRQHGKGMVIGTT  103 (162)
T ss_dssp             ECSC--HHHHHHHHHHHHHTTCEEEECCC
T ss_pred             Eecc--HHHHHHHHHHHHhccceeEEecC
Confidence            9964  466667777765 4455554443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.90  E-value=0.085  Score=37.32  Aligned_cols=80  Identities=16%  Similarity=0.100  Sum_probs=54.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|++.++.......              ..+        +..++.+++.  .+|+|+.+...
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~~--------~~~~l~~l~~--~~D~v~~~~pl  107 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------------PDF--------DYVSLEDLFK--QSDVIDLHVPG  107 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------------TTC--------EECCHHHHHH--HCSEEEECCCC
T ss_pred             ecccccccccccccccceeeeccCCccchhhh--------------cch--------hHHHHHHHHH--hcccceeeecc
Confidence            67999999999999889999999886554210              111        1234667777  88998877665


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEecc
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +..    -....++.++....+|.+|=.
T Consensus       108 t~~T~~li~~~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         108 IEQNTHIINEAAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred             cccccccccHHHhhccCCceEEEecccH
Confidence            432    134566777765667766643

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.88  E-value=0.0046  Score=41.93  Aligned_cols=72  Identities=15%  Similarity=0.211  Sum_probs=42.5

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|+ |++|+.++..|+..+  .++++++++++....... ..............+...|.       +.++  +.|+|+.
T Consensus        12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~-Dl~~~~~~~~~~~~~~~~d~-------~~l~--daDvvvi   80 (148)
T d1ldna1          12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAM-DFNHGKVFAPKPVDIWHGDY-------DDCR--DADLVVI   80 (148)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-HHHHHTTSSSSCCEEEECCG-------GGTT--TCSEEEE
T ss_pred             ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhc-cHhhCccccCCCeEEEECCH-------HHhc--cceeEEE
Confidence            365 999999999999987  489999987654211000 00000000012333333433       3355  9999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      +++..
T Consensus        81 tag~~   85 (148)
T d1ldna1          81 CAGAN   85 (148)
T ss_dssp             CCSCC
T ss_pred             ecccc
Confidence            98874

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=93.65  E-value=0.053  Score=36.34  Aligned_cols=70  Identities=13%  Similarity=0.178  Sum_probs=42.5

Q ss_pred             CccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      | +|++|+.++..|+.+|  .+++++++++........ ..... ............|+   +    .+.  ++|+|+.+
T Consensus        12 G-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~-Dl~~a-~~~~~~~~~~~~d~---~----~~~--~adivvit   79 (146)
T d1ez4a1          12 G-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL-DLEDA-QAFTAPKKIYSGEY---S----DCK--DADLVVIT   79 (146)
T ss_dssp             C-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-HHHGG-GGGSCCCEEEECCG---G----GGT--TCSEEEEC
T ss_pred             C-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHH-HHhcc-ccccCCceEeeccH---H----Hhc--cccEEEEe
Confidence            6 5999999999999987  699999987644210000 00000 01123344444543   2    244  99999999


Q ss_pred             CCCC
Q 024575           80 NGRE   83 (265)
Q Consensus        80 a~~~   83 (265)
                      +|..
T Consensus        80 ag~~   83 (146)
T d1ez4a1          80 AGAP   83 (146)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            8863

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.31  E-value=0.019  Score=39.82  Aligned_cols=89  Identities=13%  Similarity=0.127  Sum_probs=50.7

Q ss_pred             CccccchHHHHHHHHHcCCeEE-EEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHH--hhccCccEEEE
Q 024575            2 GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYD   78 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~-~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~~~d~vi~   78 (265)
                      |+ |.+|...++.+...|.+++ +.++++.+ .+...        + ..-.+++  |..+++..+++  +...++|+||.
T Consensus        36 G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k-~~~a~--------~-~Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid  102 (174)
T d1f8fa2          36 GA-GAVGLSALLAAKVCGASIIIAVDIVESR-LELAK--------Q-LGATHVI--NSKTQDPVAAIKEITDGGVNFALE  102 (174)
T ss_dssp             SC-SHHHHHHHHHHHHHTCSEEEEEESCHHH-HHHHH--------H-HTCSEEE--ETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred             CC-CHHHhhhhhcccccccceeeeeccHHHH-HHHHH--------H-cCCeEEE--eCCCcCHHHHHHHHcCCCCcEEEE
Confidence            54 9999999988888887555 45555443 11111        1 1222333  44443322222  23347999999


Q ss_pred             cCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           79 INGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +.|.. ......++.++...++++++
T Consensus       103 ~~G~~-~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         103 STGSP-EILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             CSCCH-HHHHHHHHTEEEEEEEEECC
T ss_pred             cCCcH-HHHHHHHhcccCceEEEEEe
Confidence            98752 33445566667555777665

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.26  E-value=0.035  Score=39.22  Aligned_cols=83  Identities=10%  Similarity=-0.003  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|.+.++.......              ..     .++...+++.+++.  ..|+|+.+...
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~-----~~~~~~~~l~~ll~--~sD~i~~~~pl  114 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--------------RA-----LGLQRVSTLQDLLF--HSDCVTLHCGL  114 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--------------HH-----HTCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccccccccceeeeeccccceeeccCcccccch--------------hh-----hccccccchhhccc--cCCEEEEeecc
Confidence            56999999999999889999999886554110              00     01122345667787  88888876655


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEecc
Q 024575           83 EADE----VEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~~----~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +...    ....+..++....||.+|-.
T Consensus       115 t~~T~~li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         115 NEHNHHLINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             CTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             cccchhhhhHHHHhccCCCCeEEecCCc
Confidence            4221    23456667655566666643

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.03  E-value=0.098  Score=35.76  Aligned_cols=91  Identities=13%  Similarity=0.158  Sum_probs=53.2

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~v   76 (265)
                      +|++|.+|...+..+...| .+|++.++++.+. +..        .  .-++.. ..|..+.+.   +.+.....++|+|
T Consensus        34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-~~~--------~--~~Ga~~-~i~~~~~~~~~~~~~~~~~~~~d~v  101 (170)
T d1jvba2          34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAA--------K--RAGADY-VINASMQDPLAEIRRITESKGVDAV  101 (170)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHH--------H--HHTCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             EeccccceeeeeecccccccccccccccchhhH-HHH--------H--HcCCce-eeccCCcCHHHHHHHHhhcccchhh
Confidence            4788999999999988888 5888888876552 111        1  123321 223344333   3333333469999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      |++++.. ......++.++...+++.++
T Consensus       102 id~~g~~-~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         102 IDLNNSE-KTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred             hcccccc-hHHHhhhhhcccCCEEEEec
Confidence            9998742 22233345555445677665

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.037  Score=37.07  Aligned_cols=29  Identities=28%  Similarity=0.410  Sum_probs=22.9

Q ss_pred             CCccccchHHHHHHHHH-c--CCeEEEEEcCC
Q 024575            1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGK   29 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~-~--g~~V~~l~r~~   29 (265)
                      +|++|.+|++++..|.. .  ..++++++..+
T Consensus         6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            58899999999988764 3  47888888653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=92.81  E-value=0.21  Score=30.20  Aligned_cols=65  Identities=11%  Similarity=0.126  Sum_probs=43.2

Q ss_pred             cccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCCC
Q 024575            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (265)
                      -|-.|.++++.|.+.|++|++.+.++........          .....+..... +.+    .+.  ++|.||-.-|..
T Consensus        13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~----------~~~~~~~~~~~-~~~----~~~--~~d~vi~SPGi~   75 (93)
T d2jfga1          13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL----------PEAVERHTGSL-NDE----WLM--AADLIVASPGIA   75 (93)
T ss_dssp             CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS----------CTTSCEEESBC-CHH----HHH--HCSEEEECTTSC
T ss_pred             ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH----------hhccceeeccc-chh----hhc--cCCEEEECCCCC
Confidence            4778999999999999999999987654322111          13444444432 222    344  889999988875


Q ss_pred             cc
Q 024575           84 AD   85 (265)
Q Consensus        84 ~~   85 (265)
                      .+
T Consensus        76 ~~   77 (93)
T d2jfga1          76 LA   77 (93)
T ss_dssp             TT
T ss_pred             CC
Confidence            44

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.67  E-value=0.018  Score=40.08  Aligned_cols=29  Identities=24%  Similarity=0.449  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|+++||+|++.+|++++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~   36 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSK   36 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998766

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=92.59  E-value=0.013  Score=39.45  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=24.5

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +| .|++|+.++..|+.+|  .+++++++++..
T Consensus         7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            36 5999999999999886  588888877654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.54  E-value=0.028  Score=38.99  Aligned_cols=18  Identities=22%  Similarity=0.169  Sum_probs=16.4

Q ss_pred             CCccccchHHHHHHHHHc
Q 024575            1 MGGTRFIGVFLSRLLVKE   18 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~   18 (265)
                      |||+|.+|++++..|++.
T Consensus        30 ~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          30 SGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             ETTTSHHHHHHHHHHHHT
T ss_pred             ECCCcHHHHHHHHHHHcC
Confidence            699999999999999874

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.51  E-value=0.24  Score=34.94  Aligned_cols=91  Identities=14%  Similarity=0.098  Sum_probs=49.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |++..|..+++.|.+.|++|.++.-.+++.........-..+.. ..++.++..+-.+.+.+.+.+.+.++|+++.+...
T Consensus         7 ~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~~~~~i~~~~~Dlii~~g~~   85 (203)
T d2blna2           7 AYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYR   85 (203)
T ss_dssp             ECHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHHHHHHHHHTCCSEEEEESCC
T ss_pred             ecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchhhhhhhhhhcccceeeeecc
Confidence            34567999999999999999877654443211111111112221 24666665433334445555666789998877643


Q ss_pred             CccchHHHHHhCC
Q 024575           83 EADEVEPILDALP   95 (265)
Q Consensus        83 ~~~~~~~l~~~~~   95 (265)
                      . ---..+++..+
T Consensus        86 ~-ii~~~il~~~~   97 (203)
T d2blna2          86 H-LIYDEILQLAP   97 (203)
T ss_dssp             S-CCCHHHHTTCT
T ss_pred             c-chhcccchhhH
Confidence            2 22234555444

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.25  E-value=0.04  Score=35.97  Aligned_cols=66  Identities=15%  Similarity=0.054  Sum_probs=48.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |-|-+|+.+++.|.  +++|+++..++.... .+.          ..++.++.+|.++++.+.++-- .+.+.++-+...
T Consensus         7 G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~-~~~----------~~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi~~~~~   72 (129)
T d2fy8a1           7 GWSESTLECLRELR--GSEVFVLAEDENVRK-KVL----------RSGANFVHGDPTRVSDLEKANV-RGARAVIVNLES   72 (129)
T ss_dssp             SCCHHHHHHHHTSC--GGGEEEEESCTTHHH-HHH----------HTTCEEEESCTTSHHHHHHTTC-TTCSEEEECCSS
T ss_pred             CCCHHHHHHHHHHc--CCCCEEEEcchHHHH-HHH----------hcCccccccccCCHHHHHHhhh-hcCcEEEEeccc
Confidence            45889999999984  677888887766521 111          3689999999999998887543 278888877654

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.24  E-value=0.2  Score=32.29  Aligned_cols=64  Identities=17%  Similarity=0.168  Sum_probs=49.6

Q ss_pred             cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      +.+.+.++.|.+.|++++.+..+++......            .-..-++..-...+.+.++++.+++|.|+-..|
T Consensus        28 y~~~~a~~alke~g~~~iliN~NP~TVstd~------------d~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          28 YSGAQACKALREEGYRVINVNSNPATIMTDP------------EMADATYIEPIHWEVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSCTTCGGGCG------------GGSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHHcCCeEEEecCchHhhhcCh------------hhcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence            5678899999999999999999998843322            223345666667899999999899999996654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.11  E-value=0.18  Score=33.80  Aligned_cols=94  Identities=18%  Similarity=0.197  Sum_probs=55.3

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEec--------------------C
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD--------------------R   58 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D--------------------~   58 (265)
                      +|+||-||+...+-+.+.  .++|++++-+....  .+.    ....++.+..-.+ .|                    +
T Consensus         7 lGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~--~L~----~q~~~f~pk~v~i-~d~~~~~~l~~~l~~~~~~~~~~   79 (151)
T d1q0qa2           7 LGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVT--RMV----EQCLEFSPRYAVM-DDEASAKLLKTMLQQQGSRTEVL   79 (151)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHH--HHH----HHHHHHCCSEEEE-SSHHHHHHHHHHHHHTTCCCEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHH--HHH----HHHHHHhhccccc-ccHHHHHHHHHHhhhhccccccc
Confidence            599999999999988886  48999998665441  110    1111111111111 11                    1


Q ss_pred             CChHHHHHHhhccCccEEEEcCCCCccchHHHHHhCCCCCcEEE
Q 024575           59 KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIY  102 (265)
Q Consensus        59 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~  102 (265)
                      ...+.+.++....++|+|++...- ..+....+.+++..+++..
T Consensus        80 ~g~~~l~~~~~~~~~D~vi~AI~G-~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          80 SGQQAACDMAALEDVDQVMAAIVG-AAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             ESHHHHHHHHTCTTCCEEEECCSS-GGGHHHHHHHHHTTCEEEE
T ss_pred             cChHHHHHHhcCCCCCEEEEecCc-ccHHHHHHHHHhcCCeEEE
Confidence            134556666665578888887532 5667777777774455443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.09  E-value=0.11  Score=35.08  Aligned_cols=19  Identities=21%  Similarity=0.135  Sum_probs=17.2

Q ss_pred             CCccccchHHHHHHHHHcC
Q 024575            1 MGGTRFIGVFLSRLLVKEG   19 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g   19 (265)
                      +||+|++|++++..|...+
T Consensus        10 iGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1          10 TGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             SSTTSHHHHHHHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHhcc
Confidence            6999999999999999864

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.05  E-value=0.31  Score=31.87  Aligned_cols=26  Identities=12%  Similarity=0.197  Sum_probs=21.0

Q ss_pred             CCccccchHHHHHHHHHc-CCeEEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT   26 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~   26 (265)
                      .|++|.+|+.+++.+.+. ++++.+..
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            489999999999998775 57776654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.95  E-value=0.37  Score=30.67  Aligned_cols=64  Identities=13%  Similarity=0.044  Sum_probs=48.5

Q ss_pred             cchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      +.+.+.++.|.+.|++++.+..+|+......            .-..-++..-...+.+.++++.+++|.|+-..|
T Consensus        25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~------------d~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          25 YCCVHASLALREDGYETIMVNCNPETVSTDY------------DTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCCTTSSTTST------------TSSSEEECCCCSHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHhcCCeEEEEecChhhhhcCh------------hhcCceEEccCCHHHHHHHHHHhCCCEEEeehh
Confidence            5678899999999999999999998854332            223335555567788999998889999986544

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.68  E-value=0.053  Score=38.17  Aligned_cols=84  Identities=14%  Similarity=0.062  Sum_probs=54.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|...++.........             .     ......+++.+++.  ..|+|+.+...
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-------------~-----~~~~~~~~l~~ll~--~sD~v~l~~pl  113 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-------------S-----YQATFHDSLDSLLS--VSQFFSLNAPS  113 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-------------H-----HTCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ecccchHHHHHHHHhhccccccccccccccchhh-------------c-----ccccccCCHHHHHh--hCCeEEecCCC
Confidence            5699999999999988999999887655421000             0     00112345677888  88999876655


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEecc
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSSA  106 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss~  106 (265)
                      +..    -....++.+++...||.+|=.
T Consensus       114 t~~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         114 TPETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             CchHhheecHHHhhCcCCccEEEecCCc
Confidence            432    134566667765667766643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.60  E-value=0.18  Score=32.07  Aligned_cols=74  Identities=14%  Similarity=0.164  Sum_probs=44.0

Q ss_pred             Ccc---ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |+|   +..|..+.+.|++.||+|+.+..+....                .+..       ...++.++-.  .+|.++-
T Consensus         8 GaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i----------------~G~~-------~y~sl~~lp~--~~D~vvi   62 (116)
T d1y81a1           8 GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLK-------CYRSVRELPK--DVDVIVF   62 (116)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-------CBSSGGGSCT--TCCEEEE
T ss_pred             cccCCCCCcHHHHHHHHHHCCCEEEEEccccccc----------------cCcc-------ccccchhccc--cceEEEE
Confidence            555   6789999999999999988875432221                1111       2222333334  7898886


Q ss_pred             cCCCCccchHHHHHhCC--CCCcEEE
Q 024575           79 INGREADEVEPILDALP--NLEQFIY  102 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~--~~~~~v~  102 (265)
                      +..  ......+++.+.  +.+.+++
T Consensus        63 ~vp--~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          63 VVP--PKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             CSC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred             EeC--HHHHHHHHHHHHhcCCceEEe
Confidence            643  445555555543  6655443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.60  E-value=0.019  Score=38.46  Aligned_cols=30  Identities=17%  Similarity=0.261  Sum_probs=23.7

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +|+ |.+|+.++..|+.++  .++++++++++.
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            365 999999999999987  489999988765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.19  E-value=0.17  Score=32.49  Aligned_cols=29  Identities=24%  Similarity=0.268  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|.++.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            67999999999999999999999998754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.07  E-value=0.072  Score=37.32  Aligned_cols=83  Identities=12%  Similarity=-0.009  Sum_probs=51.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.||+.+++.|..-|.+|...+|.........           ..+       +....++.++++  .+|+|+.+...
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-----------~~~-------~~~~~~l~~~l~--~sD~v~~~~pl  110 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------LTWHATREDMYP--VCDVVTLNCPL  110 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------CEECSSHHHHGG--GCSEEEECSCC
T ss_pred             cccccchhhhhhhhccCceEEEEeeccccccccc-----------ccc-------ccccCCHHHHHH--hccchhhcccc
Confidence            6799999999999988999999998754411000           001       122345567777  88888766554


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEec
Q 024575           83 EAD----EVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~----~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +..    -....++.+++...||.+|-
T Consensus       111 t~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         111 HPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cccchhhhHHHHHHhCCCCCEEEecCc
Confidence            332    12345555654445665554

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.07  E-value=0.22  Score=32.78  Aligned_cols=76  Identities=11%  Similarity=0.005  Sum_probs=46.2

Q ss_pred             Ccc---ccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      |+|   +..|..+++.|.+.||+|+.+..+....                .+..       ...++.++-.  .+|.|+-
T Consensus        26 GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i----------------~G~~-------~~~sl~dlp~--~iD~v~i   80 (139)
T d2d59a1          26 GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------------LGRK-------CYPSVLDIPD--KIEVVDL   80 (139)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-------CBSSGGGCSS--CCSEEEE
T ss_pred             eecCCCCCchHHHHHHHHHCCCEEEEECCccccc----------------CCCc-------ccccccccCc--cceEEEE
Confidence            665   6789999999999999988876543321                1111       1122233333  7888887


Q ss_pred             cCCCCccchHHHHHhCC--CCCcEEEEe
Q 024575           79 INGREADEVEPILDALP--NLEQFIYCS  104 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~--~~~~~v~~S  104 (265)
                      +..  ......+++.+.  +++.+++.+
T Consensus        81 ~vp--~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          81 FVK--PKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             CSC--HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             EeC--HHHHHHHHHHHHHhCCCEEEEec
Confidence            754  455566666644  666554433

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=90.98  E-value=0.91  Score=30.88  Aligned_cols=90  Identities=16%  Similarity=0.131  Sum_probs=55.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccc-eEEEecCCC--hHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~--~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|...+..+...|. +|++.++++.+. +.         .. .-+. ..+...-.+  .....+.....++|++|.
T Consensus        36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~---------a~-~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie  104 (174)
T d1e3ia2          36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKF-PK---------AK-ALGATDCLNPRELDKPVQDVITELTAGGVDYSLD  104 (174)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HH---------HH-HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCChHHHHHHHHHHHhCCceeeeeccchHHH-HH---------HH-HhCCCcccCCccchhhhhhhHhhhhcCCCcEEEE
Confidence            359999999999999996 677777776652 11         11 1233 333222222  233444445568999999


Q ss_pred             cCCCCccchHHHHHhCC-CCCcEEEEe
Q 024575           79 INGREADEVEPILDALP-NLEQFIYCS  104 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~-~~~~~v~~S  104 (265)
                      ++|.. ......++.++ +..+++.++
T Consensus       105 ~~G~~-~~~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2         105 CAGTA-QTLKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             SSCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred             ecccc-hHHHHHHHHhhcCCeEEEecC
Confidence            99852 33455566666 346888776

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.98  E-value=0.16  Score=32.10  Aligned_cols=85  Identities=14%  Similarity=0.093  Sum_probs=54.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|..-++.|++.|.+|++.+.........+.+         ..++.+...++.+.+     +.  +.+.|+.+.+.
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~d-----l~--~~~lv~~at~d   82 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---------EGMLTLVEGPFDETL-----LD--SCWLAIAATDD   82 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---------TTSCEEEESSCCGGG-----GT--TCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---------cCCceeeccCCCHHH-----hC--CCcEEeecCCC
Confidence            569999999999999999999998766553222111         356777777665432     44  78888866543


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 024575           83 EADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        83 ~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                       ..-...+.+.++....+|.+.
T Consensus        83 -~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          83 -DTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             -HHHHHHHHHHHHHTTCEEEET
T ss_pred             -HHHHHHHHHHHHHcCCEEEeC
Confidence             222335555565334455544

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=90.96  E-value=0.22  Score=34.03  Aligned_cols=91  Identities=15%  Similarity=0.129  Sum_probs=52.4

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|.+|...++.+...|. .|++.++++.+. +...         .....+++..+-.+.+...+.....++|+||.+++
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~-~~~~---------~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAE---------RLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHH---------HTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHH-HHHh---------hcccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            469999999998887774 667777766541 1111         11233443322222333444444457999999988


Q ss_pred             CCccchHHHHHhCCCCCcEEEEe
Q 024575           82 READEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        82 ~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      .. ......++.++...+++.++
T Consensus       110 ~~-~~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         110 SQ-ATVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             CH-HHHHHGGGGEEEEEEEEECC
T ss_pred             cc-hHHHHHHHHHhCCCEEEEEe
Confidence            53 22344455566445777665

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=90.95  E-value=0.052  Score=36.15  Aligned_cols=30  Identities=13%  Similarity=0.190  Sum_probs=25.8

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +|| |.+|+.++..|+..+  .+++++++++..
T Consensus         6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~   37 (142)
T d1guza1           6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGI   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSH
T ss_pred             ECc-CHHHHHHHHHHHhCCCCceEEEecccccc
Confidence            475 999999999999987  599999988765

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.91  E-value=0.46  Score=32.51  Aligned_cols=91  Identities=12%  Similarity=0.104  Sum_probs=55.4

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccce-EEE-ecCCC-hHHHHHHhhccCccEEEE
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLK-GDRKD-YDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~D~~~-~~~~~~~~~~~~~d~vi~   78 (265)
                      |.|.+|...++.+...| .+|+++++++++..          +.. .-+.. ++. -|-.+ .+.+.+.....++|++|.
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~----------~Ak-~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFE----------KAM-AVGATECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH----------HHH-HHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHH----------HHH-hcCCcEEECccccchHHHHHHHHhccccceEEEE
Confidence            46999999999999998 58999999887731          111 12333 222 12111 233445555568999999


Q ss_pred             cCCCCccchHHHHHhCC-CCCcEEEEec
Q 024575           79 INGREADEVEPILDALP-NLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~~~~l~~~~~-~~~~~v~~Ss  105 (265)
                      +.+.. ......+..+. +..+++.++.
T Consensus       106 ~~g~~-~~~~~a~~~~~~~~G~~v~vG~  132 (176)
T d1d1ta2         106 VIGHL-ETMIDALASCHMNYGTSVVVGV  132 (176)
T ss_dssp             CSCCH-HHHHHHHTTSCTTTCEEEECSC
T ss_pred             eCCch-HHHHHHHHHhhcCCeEEEEEEc
Confidence            98753 22233344444 5467887763

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.67  E-value=0.082  Score=36.90  Aligned_cols=81  Identities=12%  Similarity=0.059  Sum_probs=51.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|..-|.+|++.++........            ...++        ..++.+++.  .+|+|+.+...
T Consensus        51 G~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~------------~~~~~--------~~~l~ell~--~sDiv~~~~Pl  108 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA------------QLGIE--------LLSLDDLLA--RADFISVHLPK  108 (184)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH------------HHTCE--------ECCHHHHHH--HCSEEEECCCC
T ss_pred             cccchhHHHHHHhhhccceEEeecCCCChhHHh------------hcCce--------eccHHHHHh--hCCEEEEcCCC
Confidence            679999999999988899999988775541100            01111        234567787  89998877665


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEec
Q 024575           83 EADE----VEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~----~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +...    -...+..++....||.+|=
T Consensus       109 t~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         109 TPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CchhhhhhhHHHHhhhCCCceEEEecc
Confidence            4321    2345555665556666663

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=90.43  E-value=0.063  Score=35.73  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=24.4

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (265)
                      +|+ |.+|+.++..|..++ .++++++.+++.
T Consensus         7 IGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           7 IGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            364 999999999998877 488888877655

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.42  E-value=0.11  Score=36.81  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|..++..|+++|++|++++.++..
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            67999999999999999999999987654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.29  E-value=0.0047  Score=42.05  Aligned_cols=81  Identities=16%  Similarity=0.128  Sum_probs=43.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|.+|+++++.|.+.++.+.+..|++++.. .+.        + ..+..  ..+      ..++.+  ..|+||-+...
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~-~l~--------~-~~~~~--~~~------~~~~~~--~~DiVil~v~d   65 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRAR-NLA--------E-VYGGK--AAT------LEKHPE--LNGVVFVIVPD   65 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHH-HHH--------H-HTCCC--CCS------SCCCCC-----CEEECSCT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhc-chh--------h-ccccc--ccc------hhhhhc--cCcEEEEeccc
Confidence            6899999999988664444457777766521 111        1 01111  111      123445  78999988653


Q ss_pred             CccchHHHHHhCC-CCCcEEEEec
Q 024575           83 EADEVEPILDALP-NLEQFIYCSS  105 (265)
Q Consensus        83 ~~~~~~~l~~~~~-~~~~~v~~Ss  105 (265)
                        .....+++.+. +.+-++++|+
T Consensus        66 --~~i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          66 --RYIKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             --TTHHHHHTTTCCSSCCEEECCS
T ss_pred             --hhhhHHHhhhcccceeeeeccc
Confidence              45666777776 5556677665

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=90.07  E-value=1  Score=30.53  Aligned_cols=89  Identities=13%  Similarity=0.017  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccce-EEEecCCC--hHHHHHHhhccCccEEEEc
Q 024575            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~--~~~~~~~~~~~~~d~vi~~   79 (265)
                      .|.+|...++.+...|. +|++.++++.+.. .         .. .-+.. ++...-.|  .+.........++|++|.+
T Consensus        36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~-~---------a~-~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFP-K---------AI-ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHH-H---------HH-HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCchhHHHHHHHHHcCCceeeccCChHHHHH-H---------HH-HcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            58999999999998885 7888888776621 1         11 12333 33221122  2334444444589999999


Q ss_pred             CCCCccchHHHHHhCC-CCCcEEEEe
Q 024575           80 NGREADEVEPILDALP-NLEQFIYCS  104 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~-~~~~~v~~S  104 (265)
                      .+. .......+..++ +..+++.+.
T Consensus       105 ~g~-~~~~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2         105 AGR-IETMMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             SCC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred             CCC-chHHHHHHHHHHHhcCceEEEE
Confidence            875 233445555665 446777666

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.05  E-value=0.25  Score=33.74  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=46.7

Q ss_pred             ccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |.|++|+..++.|.+. +.+++++.....+...               ......     ..+......  ++|+|+.+.+
T Consensus        10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------------~~~~~~-----~~~~~~~~~--~~D~Vvi~tp   67 (170)
T d1f06a1          10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------------KTPVFD-----VADVDKHAD--DVDVLFLCMG   67 (170)
T ss_dssp             CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------------SSCEEE-----GGGGGGTTT--TCSEEEECSC
T ss_pred             CChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------------cccccc-----chhhhhhcc--ccceEEEeCC
Confidence            5799999999999876 6788877655443211               111111     112223344  8999998776


Q ss_pred             CCccchHHHHHhCCCCCcEE
Q 024575           82 READEVEPILDALPNLEQFI  101 (265)
Q Consensus        82 ~~~~~~~~l~~~~~~~~~~v  101 (265)
                      .. .+......+++..+++|
T Consensus        68 ~~-~h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          68 SA-TDIPEQAPKFAQFACTV   86 (170)
T ss_dssp             TT-THHHHHHHHHTTTSEEE
T ss_pred             Cc-ccHHHHHHHHHCCCcEE
Confidence            54 35556666677556655

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=89.96  E-value=0.32  Score=32.46  Aligned_cols=31  Identities=26%  Similarity=0.273  Sum_probs=25.9

Q ss_pred             CCccccchHHHHHHHHHc--CCeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~   31 (265)
                      +|+||-||+...+-+.+.  .++|++++-+...
T Consensus         8 lGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~   40 (150)
T d1r0ka2           8 LGATGSIGHSTLDLIERNLDRYQVIALTANRNV   40 (150)
T ss_dssp             ETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCH
T ss_pred             ECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCH
Confidence            599999999999998875  4899999876543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.40  E-value=0.16  Score=29.73  Aligned_cols=30  Identities=20%  Similarity=0.136  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCcc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (265)
                      |+|.+|+-++....+-|+++++++-+++..
T Consensus         8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             BCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             cCCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            679999999999999999999999877663

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=89.38  E-value=0.051  Score=36.27  Aligned_cols=30  Identities=20%  Similarity=0.299  Sum_probs=25.2

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +|+ |.+|++++..|..++  .+++++++++..
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~   38 (143)
T d1llda1           7 IGA-GAVGSTLAFAAAQRGIAREIVLEDIAKER   38 (143)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence            365 999999999999987  489999987654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.92  E-value=0.056  Score=35.91  Aligned_cols=71  Identities=23%  Similarity=0.263  Sum_probs=41.8

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      +|+ |.+|+.++..|+.++  .+++++++++........ .. ...............|   .    +.++  +.|+|+-
T Consensus         6 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~-Dl-~~~~~~~~~~~~~~~~---~----~~~~--~adivvi   73 (140)
T d1a5za1           6 VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDAL-DL-IHGTPFTRRANIYAGD---Y----ADLK--GSDVVIV   73 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-HH-HHHGGGSCCCEEEECC---G----GGGT--TCSEEEE
T ss_pred             ECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhc-cc-cccccccccccccCCc---H----HHhc--CCCEEEE
Confidence            365 999999999998886  589999887654211000 00 0000112233333333   2    2345  9999999


Q ss_pred             cCCCC
Q 024575           79 INGRE   83 (265)
Q Consensus        79 ~a~~~   83 (265)
                      ++|..
T Consensus        74 tag~~   78 (140)
T d1a5za1          74 AAGVP   78 (140)
T ss_dssp             CCCCC
T ss_pred             ecccc
Confidence            99873

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.92  E-value=0.2  Score=33.64  Aligned_cols=18  Identities=17%  Similarity=0.032  Sum_probs=16.2

Q ss_pred             CCccccchHHHHHHHHHc
Q 024575            1 MGGTRFIGVFLSRLLVKE   18 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~   18 (265)
                      +||+|.+|++++..|++.
T Consensus         9 iGA~G~VG~~la~~l~~~   26 (154)
T d5mdha1           9 TGAAGQIAYSLLYSIGNG   26 (154)
T ss_dssp             SSTTSHHHHTTHHHHHTT
T ss_pred             ECCCCHHHHHHHHHHHHH
Confidence            699999999999999864

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=88.85  E-value=0.57  Score=32.18  Aligned_cols=89  Identities=12%  Similarity=0.051  Sum_probs=48.0

Q ss_pred             ccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecC-----------CChHHHHHHhhc
Q 024575            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-----------KDYDFVKSSLSA   70 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~~~~~~   70 (265)
                      |.|.||+.+++.|.++ +.+|+++....+......       +.  ..... +.+..           .....+..++. 
T Consensus         8 GfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~-------~~--~~~~~-~~~~~~~~~~~~~~~i~v~g~~~~~~~-   76 (178)
T d1b7go1           8 GYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFI-------AH--RRGIR-IYVPQQSIKKFEESGIPVAGTVEDLIK-   76 (178)
T ss_dssp             CCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHH-------HH--HTTCC-EECCGGGHHHHHTTTCCCCCCHHHHHH-
T ss_pred             CCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHH-------hc--ccCcc-eeccCccceeccccceecCCchhhhhh-
Confidence            5799999999999987 478888765433211000       00  00000 11111           11112344455 


Q ss_pred             cCccEEEEcCCCCccchHHHHHhCCCCCcEEEEe
Q 024575           71 KGFDVVYDINGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                       ++|+|+.|.|... ...++-..++..+++|+.+
T Consensus        77 -~vDiViecTG~f~-~~e~a~~hl~~G~KvIi~~  108 (178)
T d1b7go1          77 -TSDIVVDTTPNGV-GAQYKPIYLQLQRNAIFQG  108 (178)
T ss_dssp             -HCSEEEECCSTTH-HHHHHHHHHHTTCEEEECT
T ss_pred             -cCCEEEECCCCcC-CHHHHHHHHHcCCEEEEEC
Confidence             8999999998642 2333333345446777654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=88.74  E-value=0.044  Score=37.35  Aligned_cols=30  Identities=10%  Similarity=0.121  Sum_probs=25.0

Q ss_pred             CCccccchHHHHHHHHHcCC--eEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (265)
                      +|+ |.+|+.++..|..+|.  ++++++++++.
T Consensus        26 IGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          26 VGV-GQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            364 9999999999999984  89999887544

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=88.43  E-value=0.072  Score=35.83  Aligned_cols=71  Identities=17%  Similarity=0.183  Sum_probs=44.3

Q ss_pred             ccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |.|.+|+++++.|++.| ++|++.+|++++. +.+.+         ..++... .|   .+    .+.  +.|+||-+.-
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~-~~l~~---------~~~~~~~-~~---~~----~v~--~~Div~lavk   66 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKR-ERLEK---------ELGVETS-AT---LP----ELH--SDDVLILAVK   66 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHHH-HHHHH---------HTCCEEE-SS---CC----CCC--TTSEEEECSC
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhHH-HHhhh---------hcccccc-cc---cc----ccc--ccceEEEecC
Confidence            56999999999999887 9999999987652 11110         1233322 11   12    134  7899997743


Q ss_pred             CCccchHHHHHhCC
Q 024575           82 READEVEPILDALP   95 (265)
Q Consensus        82 ~~~~~~~~l~~~~~   95 (265)
                        +.....+++.++
T Consensus        67 --P~~~~~v~~~l~   78 (152)
T d1yqga2          67 --PQDMEAACKNIR   78 (152)
T ss_dssp             --HHHHHHHHTTCC
T ss_pred             --HHHHHHhHHHHh
Confidence              445555655555

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=88.39  E-value=0.075  Score=36.28  Aligned_cols=89  Identities=10%  Similarity=0.127  Sum_probs=62.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhh-hccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |.|-.|..-++.+...|.+|++++.+.+.. +.        +... ...++.   -..+.+.+.+.+.  +.|+||.++-
T Consensus        39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l-~~--------l~~~~~~~~~~---~~~~~~~l~~~~~--~aDivI~aal  104 (168)
T d1pjca1          39 GGGVVGTEAAKMAVGLGAQVQIFDINVERL-SY--------LETLFGSRVEL---LYSNSAEIETAVA--EADLLIGAVL  104 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HH--------HHHHHGGGSEE---EECCHHHHHHHHH--TCSEEEECCC
T ss_pred             CCChHHHHHHHHHhhCCCEEEEEeCcHHHH-HH--------HHHhhccccee---ehhhhhhHHHhhc--cCcEEEEeee
Confidence            458889999999999999999999987662 11        1111 123333   2456778889998  9999999876


Q ss_pred             CCc-----cchHHHHHhCCCCCcEEEEec
Q 024575           82 REA-----DEVEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        82 ~~~-----~~~~~l~~~~~~~~~~v~~Ss  105 (265)
                      ...     .-++.+++.++...-+|=++.
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            532     236778888885556666664

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.18  E-value=0.16  Score=34.44  Aligned_cols=73  Identities=10%  Similarity=-0.021  Sum_probs=52.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |.|.+|+.+++.|...|.+|.+...+|....+..           ..+....        .+.+++.  ..|+++-+.|.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-----------~dG~~v~--------~~~~a~~--~adivvtaTGn   89 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINALQAA-----------MEGYEVT--------TMDEACQ--EGNIFVTTTGC   89 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhHHhh-----------cCceEee--------ehhhhhh--hccEEEecCCC
Confidence            6799999999999999999999999875532111           1233322        3456676  88999998886


Q ss_pred             CccchHHHHHhCCC
Q 024575           83 EADEVEPILDALPN   96 (265)
Q Consensus        83 ~~~~~~~l~~~~~~   96 (265)
                      ...-...-++.++.
T Consensus        90 ~~vI~~eh~~~MKd  103 (163)
T d1li4a1          90 IDIILGRHFEQMKD  103 (163)
T ss_dssp             SCSBCHHHHTTCCT
T ss_pred             ccchhHHHHHhccC
Confidence            55556667777774

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.09  E-value=0.039  Score=37.56  Aligned_cols=30  Identities=13%  Similarity=0.273  Sum_probs=24.7

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +| .|.+|+.++..|...|  .+++++++++..
T Consensus        25 IG-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          25 VG-VGDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             EC-CSHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             EC-CCHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            36 4999999999999987  489999887644

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.91  E-value=0.24  Score=31.38  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|..++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            56999999999999999999999988654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=87.77  E-value=0.25  Score=33.64  Aligned_cols=29  Identities=10%  Similarity=0.263  Sum_probs=25.1

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~   31 (265)
                      |+|..|++++..|.+.|. +|+++.|+.++
T Consensus        24 GaGGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          24 GSGGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             CSSTTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            569999999999999995 78888888665

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.52  E-value=0.081  Score=35.19  Aligned_cols=30  Identities=10%  Similarity=0.078  Sum_probs=24.7

Q ss_pred             CCccccchHHHHHHHHHcC--CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (265)
                      +|+ |.+|+.++..|+.++  .++++++++++.
T Consensus         6 IGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   37 (142)
T d1ojua1           6 VGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred             ECc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence            365 999999999999887  589999887655

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.34  E-value=0.14  Score=34.51  Aligned_cols=28  Identities=14%  Similarity=0.186  Sum_probs=22.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|.+|..+++.|++.|+.+ ...|..++
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            57999999999999988865 45666554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=86.99  E-value=0.084  Score=36.25  Aligned_cols=29  Identities=17%  Similarity=-0.004  Sum_probs=25.7

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|..+++++..|.+.|.+|+++.|+.++
T Consensus        25 GaGGaarai~~al~~~g~~i~I~nRt~~k   53 (170)
T d1nyta1          25 GAGGASRGVLLPLLSLDCAVTITNRTVSR   53 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCcHHHHHHHHHhcccceEEEeccchHHH
Confidence            56889999999999999999999998766

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.97  E-value=0.31  Score=32.52  Aligned_cols=56  Identities=20%  Similarity=0.164  Sum_probs=39.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (265)
                      +.||+|..+++.|.+.|.+|.++.+.+.-..                     ..|-.....+.+.+.+.++++..+.
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~---------------------~~~~~~~~~~~~~l~~~GV~i~~~~  103 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANY---------------------MHFTLEYPNMMRRLHELHVEELGDH  103 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCTTTH---------------------HHHTTCHHHHHHHHHHTTCEEEETE
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCcccc---------------------ccchhHHHHHHHHHhhccceEEecc
Confidence            5699999999999999999999999754311                     1133444556666665566666543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.92  E-value=0.16  Score=34.02  Aligned_cols=30  Identities=30%  Similarity=0.483  Sum_probs=23.9

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (265)
                      +| +|.+|+.++..|...+ .+++++++++..
T Consensus         9 IG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           9 VG-SGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             EC-CCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            36 4999999998887776 588888887655

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.84  E-value=0.53  Score=31.66  Aligned_cols=87  Identities=9%  Similarity=0.009  Sum_probs=50.8

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHH---HHHHhhccCccEEEEc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVYDI   79 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vi~~   79 (265)
                      |.|.+|...++.+...|.+|+++++++.+.. ...          .-+...+ .|..+.+.   +.+...  +.+.++.+
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~-~a~----------~~Ga~~~-i~~~~~~~~~~~~~~~~--g~~~~i~~  100 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLE-LAR----------KLGASLT-VNARQEDPVEAIQRDIG--GAHGVLVT  100 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH----------HTTCSEE-EETTTSCHHHHHHHHHS--SEEEEEEC
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhHHH-hhh----------ccCcccc-ccccchhHHHHHHHhhc--CCcccccc
Confidence            4599999999888888999999998876621 110          1233221 24444333   333333  56666666


Q ss_pred             CCCCccchHHHHHhCCCCCcEEEEe
Q 024575           80 NGREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        80 a~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      ++.. ......++.++...+++.++
T Consensus       101 ~~~~-~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         101 AVSN-SAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             CSCH-HHHHHHHTTEEEEEEEEECC
T ss_pred             cccc-hHHHHHHHHhcCCcEEEEEE
Confidence            5542 33445555566445677665

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.72  E-value=0.26  Score=31.54  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|.++.|.+.-
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            56999999999999999999999997654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.37  E-value=0.33  Score=31.09  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|..++..|.+.|.+|+++.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            57999999999999999999999987644

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.32  E-value=0.26  Score=31.52  Aligned_cols=28  Identities=39%  Similarity=0.600  Sum_probs=25.4

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (265)
                      |.|++|-.++..|.+.|.+|.++.|.+.
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcHHHHHHHHHhhcccceEEEEecccc
Confidence            6799999999999999999999988754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=86.26  E-value=0.18  Score=32.66  Aligned_cols=84  Identities=8%  Similarity=0.039  Sum_probs=52.4

Q ss_pred             ccccchHHHHHHHHHc-CCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCC
Q 024575            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (265)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~   81 (265)
                      |+|..|+++++.+..+ +|+++++.-+.++.....           -.++.++     ..+.+.+... ..+++++-+..
T Consensus        10 GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~-----------I~Gi~V~-----~~~~l~~~~~-~~i~iai~~i~   72 (126)
T d2dt5a2          10 GMGRLGSALADYPGFGESFELRGFFDVDPEKVGRP-----------VRGGVIE-----HVDLLPQRVP-GRIEIALLTVP   72 (126)
T ss_dssp             CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE-----------ETTEEEE-----EGGGHHHHST-TTCCEEEECSC
T ss_pred             cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE-----------ECCEEEe-----cHHHHHHHHh-hcccEEEEeCC
Confidence            5799999999987543 789988887655522211           2455544     2344566555 36777666544


Q ss_pred             CCccchHHHHHhCC--CCCcEEEEec
Q 024575           82 READEVEPILDALP--NLEQFIYCSS  105 (265)
Q Consensus        82 ~~~~~~~~l~~~~~--~~~~~v~~Ss  105 (265)
                        ....+.+++.|.  +++.+.-++.
T Consensus        73 --~~~~~~I~d~l~~~gIk~I~~f~~   96 (126)
T d2dt5a2          73 --REAAQKAADLLVAAGIKGILNFAP   96 (126)
T ss_dssp             --HHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             --HHHHHHHHHHHHHcCCCEEeecCc
Confidence              455566777765  7766665543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.20  E-value=0.34  Score=30.79  Aligned_cols=29  Identities=24%  Similarity=0.339  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|++|-.++..|.+.|.+|.++.|.+.-
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            56999999999999999999999988654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=85.89  E-value=3.3  Score=27.71  Aligned_cols=89  Identities=17%  Similarity=0.139  Sum_probs=52.2

Q ss_pred             CccccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEE--ecCCC-hHHHHHHhhccCccEEE
Q 024575            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--GDRKD-YDFVKSSLSAKGFDVVY   77 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~D~~~-~~~~~~~~~~~~~d~vi   77 (265)
                      |+ |.+|...+.++...| .+|++.++++.+.. ...          ..+.....  .+..+ .+...+.....++|++|
T Consensus        36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~-~a~----------~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAK----------EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHH----------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHH-HHH----------HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            55 668999999999887 58888888877631 111          12333222  12222 23344444445899999


Q ss_pred             EcCCCCccchHHHHHhCC-CCCcEEEE
Q 024575           78 DINGREADEVEPILDALP-NLEQFIYC  103 (265)
Q Consensus        78 ~~a~~~~~~~~~l~~~~~-~~~~~v~~  103 (265)
                      .+.|.. ......+..++ +...++..
T Consensus       104 d~~G~~-~~~~~a~~~~~~~~g~~~~~  129 (176)
T d2jhfa2         104 EVIGRL-DTMVTALSCCQEAYGVSVIV  129 (176)
T ss_dssp             ECSCCH-HHHHHHHHHBCTTTCEEEEC
T ss_pred             ecCCch-hHHHHHHHHHhcCCcceEEe
Confidence            998863 33344556666 43444433

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.25  E-value=0.36  Score=30.87  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=24.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (265)
                      |.|++|-.++..|.+.|.+|.++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            56999999999999999999999875

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.21  E-value=0.32  Score=36.37  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (265)
                      .||..|.++++.|+.+|++|+.+.+..+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            5899999999999999999999987754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.96  E-value=0.36  Score=30.47  Aligned_cols=29  Identities=34%  Similarity=0.516  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|..++..|.+.|.+|.++.|.+.-
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            56999999999999999999999998654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=84.89  E-value=0.13  Score=34.70  Aligned_cols=91  Identities=14%  Similarity=0.075  Sum_probs=47.8

Q ss_pred             CccccchHHHH-HHHHHc-CCeEEEEE-cCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEE
Q 024575            2 GGTRFIGVFLS-RLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (265)
Q Consensus         2 GatG~iG~~l~-~~L~~~-g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (265)
                      | +|.+|+.+. +.|.+. ..+++++. |++......+.        . ..++.+...   ..+++.+..+..++|+||.
T Consensus        11 G-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a--------~-~~~i~~~~~---~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1          11 G-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARA--------Q-RMGVTTTYA---GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             C-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHH--------H-HTTCCEESS---HHHHHHHSGGGGGEEEEEE
T ss_pred             c-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhh--------h-hcCCccccc---ceeeeeecccccccCEEEE
Confidence            5 899998754 444444 35777775 55443111110        0 123333222   2344444443347999998


Q ss_pred             cCCCCccc-hHHHHHhCCCCCcEEEEec
Q 024575           79 INGREADE-VEPILDALPNLEQFIYCSS  105 (265)
Q Consensus        79 ~a~~~~~~-~~~l~~~~~~~~~~v~~Ss  105 (265)
                      +....... -....++++..+++|-.|+
T Consensus        78 ATpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             cCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            75432221 2234566776667777776

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=84.87  E-value=0.31  Score=30.72  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            67999999999999999999999887654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.77  E-value=0.54  Score=31.61  Aligned_cols=88  Identities=11%  Similarity=0.089  Sum_probs=53.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC-C-hHHHHHHhhccCccEEEEcC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-D-YDFVKSSLSAKGFDVVYDIN   80 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~-~~~~~~~~~~~~~d~vi~~a   80 (265)
                      |+|.+|...++.+...|.+|+++++++++.. ...          .-++..+...-. + .+.+.+...  +.+.++.++
T Consensus        35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-~~k----------~~Ga~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~  101 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAK----------ELGADLVVNPLKEDAAKFMKEKVG--GVHAAVVTA  101 (168)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHH----------HTTCSEEECTTTSCHHHHHHHHHS--SEEEEEESS
T ss_pred             ecccchhhhhHHHhcCCCeEeccCCCHHHhh-hhh----------hcCcceecccccchhhhhcccccC--CCceEEeec
Confidence            5699999999888888999999988776621 111          134443332221 2 223444444  667777666


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEe
Q 024575           81 GREADEVEPILDALPNLEQFIYCS  104 (265)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~~~v~~S  104 (265)
                      +. .......++.++...+++.++
T Consensus       102 ~~-~~~~~~a~~~l~~~G~i~~~g  124 (168)
T d1rjwa2         102 VS-KPAFQSAYNSIRRGGACVLVG  124 (168)
T ss_dssp             CC-HHHHHHHHHHEEEEEEEEECC
T ss_pred             CC-HHHHHHHHHHhccCCceEecc
Confidence            53 445666777777445666654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=84.56  E-value=0.34  Score=32.46  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=24.0

Q ss_pred             CCccccchHHHHHHHHHcC-CeEEEEEcCCCc
Q 024575            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (265)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (265)
                      +|+ |.+|+.++..|...+ .++++++.++..
T Consensus        13 IGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1          13 IGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            365 999999999888877 488888877654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.42  E-value=0.34  Score=30.69  Aligned_cols=29  Identities=28%  Similarity=0.497  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhccc
Confidence            56999999999999999999999997644

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=84.29  E-value=0.12  Score=35.56  Aligned_cols=29  Identities=14%  Similarity=0.022  Sum_probs=25.6

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|..+++++..|.+.+.+|+++.|+.++
T Consensus        25 GaGGaarai~~aL~~~~~~i~I~nR~~~~   53 (171)
T d1p77a1          25 GAGGATKGVLLPLLQAQQNIVLANRTFSK   53 (171)
T ss_dssp             CCSHHHHTTHHHHHHTTCEEEEEESSHHH
T ss_pred             CCcHHHHHHHHHHcccCceeeeccchHHH
Confidence            67888999999999888899999998755

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.70  E-value=0.43  Score=30.98  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |+|++|-.++..|.+.|.+|.++.+.+.-
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            56999999999999999999999998765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.67  E-value=0.44  Score=30.53  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            56999999999999999999999997644

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=83.27  E-value=0.18  Score=35.23  Aligned_cols=84  Identities=11%  Similarity=0.152  Sum_probs=48.3

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEEEEcCCC
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~   82 (265)
                      |+|..|++++..|.+.|++|.+..|+++... .+.+...  -..+.+++.+ .-++.-..++.++++  +.|+||.+.. 
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~-~i~~~~~--n~~yl~~~~l-~~~i~~t~~l~~a~~--~ad~iiiavP-   86 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVR-LVNEKRE--NVLFLKGVQL-ASNITFTSDVEKAYN--GAEIILFVIP-   86 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHHHH-HHHHHTB--CTTTSTTCBC-CTTEEEESCHHHHHT--TCSCEEECSC-
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHHHH-HHhhccc--cccccccccc-ccccccchhhhhccC--CCCEEEEcCc-
Confidence            5799999999999999999999999765421 0000000  0000011111 112222345677787  8999988754 


Q ss_pred             CccchHHHHHhC
Q 024575           83 EADEVEPILDAL   94 (265)
Q Consensus        83 ~~~~~~~l~~~~   94 (265)
                       ....+.+++.+
T Consensus        87 -s~~~~~~~~~~   97 (189)
T d1n1ea2          87 -TQFLRGFFEKS   97 (189)
T ss_dssp             -HHHHHHHHHHH
T ss_pred             -HHHHHHHHHHH
Confidence             44555555543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.65  E-value=0.43  Score=30.47  Aligned_cols=29  Identities=21%  Similarity=0.360  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|.++.|.+.-
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            56999999999999999999999998765

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.45  E-value=0.34  Score=31.41  Aligned_cols=79  Identities=11%  Similarity=0.070  Sum_probs=50.0

Q ss_pred             CCcc---ccchHHHHHHHHHcC-CeEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCCChHHHHHHhhccCccEE
Q 024575            1 MGGT---RFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         1 tGat---G~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   76 (265)
                      +|+|   +..|..+.+.|.+.| ++|+.+..+....                .+.. ..-++.|      +-.  .+|.+
T Consensus        14 VGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i----------------~G~~-~y~sl~d------lp~--~vDlv   68 (129)
T d2csua1          14 IGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV----------------QGVK-AYKSVKD------IPD--EIDLA   68 (129)
T ss_dssp             ETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE----------------TTEE-CBSSTTS------CSS--CCSEE
T ss_pred             EccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc----------------CCeE-eecchhh------cCC--CCceE
Confidence            3777   788999999987765 6888886654331                1111 1112222      223  78999


Q ss_pred             EEcCCCCccchHHHHHhCC--CCCcEEEEecc
Q 024575           77 YDINGREADEVEPILDALP--NLEQFIYCSSA  106 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~--~~~~~v~~Ss~  106 (265)
                      +-+..  ...+..+++.|.  +++.++.+|+.
T Consensus        69 vi~vp--~~~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          69 IIVVP--KRFVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             EECSC--HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             EEecC--hHHhHHHHHHHHHcCCCEEEEeccc
Confidence            87754  455666666654  88888887764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=82.20  E-value=3.2  Score=29.65  Aligned_cols=104  Identities=13%  Similarity=0.106  Sum_probs=61.4

Q ss_pred             ccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCC----------C----CChhHHhhhhccceEEEecCC-ChHHHHH
Q 024575            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP----------G----ESDQEFAEFSSKILHLKGDRK-DYDFVKS   66 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~D~~-~~~~~~~   66 (265)
                      |.|.+|++++..|...|. ++++++.+.-+....-.          +    .....+....+.+.+...+.. +.+....
T Consensus        37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~~~~~~~  116 (247)
T d1jw9b_          37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAA  116 (247)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhhhccccc
Confidence            568899999999999995 77777755533211111          0    012334444566666665543 3455666


Q ss_pred             HhhccCccEEEEcCCCCccchHHHH-HhCC-CCCcEEEEecceeee
Q 024575           67 SLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (265)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~-~~~~-~~~~~v~~Ss~~~~~  110 (265)
                      .+.  ..|+++.+...  ...+.++ ++|. ....+|+.+..+.+|
T Consensus       117 ~~~--~~divid~~d~--~~~~~~in~~~~~~~ip~i~g~~~~~~g  158 (247)
T d1jw9b_         117 LIA--EHDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSGAAIRMEG  158 (247)
T ss_dssp             HHH--TSSEEEECCSS--HHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred             ccc--ccceeeeccch--hhhhhhHHHHHHHhCCCccccccccccc
Confidence            676  89999988643  2233333 3454 446777766544443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=81.69  E-value=2  Score=28.81  Aligned_cols=88  Identities=11%  Similarity=0.024  Sum_probs=47.2

Q ss_pred             CccccchHHHHHHHHHcCC-eEEEEEcCCCccccCCCCCChhHHhhhhccceEEEecCC----ChHHHHHHhhccCccEE
Q 024575            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----DYDFVKSSLSAKGFDVV   76 (265)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~d~v   76 (265)
                      |+ |.+|...++.+...|. .|++.++++.+. +...          .-+...+. |..    +.....+.....++|+|
T Consensus        36 Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak----------~lGa~~~i-~~~~~~~~~~~~~~~~~~~g~D~v  102 (176)
T d2fzwa2          36 GL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAK----------EFGATECI-NPQDFSKPIQEVLIEMTDGGVDYS  102 (176)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH----------HHTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             cc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHH----------HhCCcEEE-eCCchhhHHHHHHHHHcCCCCcEe
Confidence            44 6789999988888885 566666655541 1111          12332221 222    12233333344589999


Q ss_pred             EEcCCCCccchHHHHHhCCCCCcEEEE
Q 024575           77 YDINGREADEVEPILDALPNLEQFIYC  103 (265)
Q Consensus        77 i~~a~~~~~~~~~l~~~~~~~~~~v~~  103 (265)
                      |.+.|.. .........++...+++++
T Consensus       103 id~~G~~-~~~~~~~~~~~~g~~~~~v  128 (176)
T d2fzwa2         103 FECIGNV-KVMRAALEACHKGWGVSVV  128 (176)
T ss_dssp             EECSCCH-HHHHHHHHTBCTTTCEEEE
T ss_pred             eecCCCH-HHHHHHHHhhcCCceeEEE
Confidence            9998742 2334455555543444443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=80.93  E-value=0.55  Score=30.11  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHcCCeEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (265)
                      |.|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            56999999999999999999999997654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=80.86  E-value=0.56  Score=31.67  Aligned_cols=29  Identities=17%  Similarity=0.368  Sum_probs=24.1

Q ss_pred             ccccchHHHHHHHHHcCC--eEEEEEcCCCc
Q 024575            3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (265)
Q Consensus         3 atG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (265)
                      |.|.+|.++++.|.+.|+  +|++.+|+++.
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            469999999999999985  77888777554