Query 024578
Match_columns 265
No_of_seqs 138 out of 1546
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 05:43:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024578.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024578hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 1.7E-30 3.8E-35 201.9 18.8 221 10-247 13-235 (244)
2 PRK13288 pyrophosphatase PpaX; 100.0 5.8E-29 1.3E-33 202.7 15.5 199 10-241 1-212 (214)
3 PRK13226 phosphoglycolate phos 100.0 3.3E-28 7.1E-33 200.2 17.5 198 9-239 9-224 (229)
4 TIGR01993 Pyr-5-nucltdase pyri 100.0 1.2E-27 2.7E-32 190.4 20.1 183 14-216 2-184 (184)
5 COG0546 Gph Predicted phosphat 100.0 3.4E-28 7.3E-33 198.8 17.0 201 9-241 1-219 (220)
6 PLN02770 haloacid dehalogenase 100.0 1.1E-27 2.4E-32 199.2 17.6 194 9-235 19-231 (248)
7 PRK10563 6-phosphogluconate ph 100.0 1.8E-27 3.8E-32 194.9 16.5 198 10-239 2-212 (221)
8 PRK13478 phosphonoacetaldehyde 100.0 6.4E-27 1.4E-31 196.9 19.7 203 9-245 1-260 (267)
9 TIGR03351 PhnX-like phosphonat 100.0 1.1E-26 2.3E-31 190.1 20.1 196 12-239 1-219 (220)
10 TIGR02253 CTE7 HAD superfamily 100.0 1.1E-26 2.3E-31 190.2 18.7 200 11-235 1-220 (221)
11 PRK10826 2-deoxyglucose-6-phos 100.0 5.4E-27 1.2E-31 192.1 16.9 196 9-237 4-217 (222)
12 TIGR01449 PGP_bact 2-phosphogl 100.0 8.5E-27 1.8E-31 189.7 17.9 191 15-238 1-212 (213)
13 TIGR01422 phosphonatase phosph 99.9 1.9E-26 4.1E-31 192.6 19.2 194 12-239 2-252 (253)
14 PRK11587 putative phosphatase; 99.9 1.5E-26 3.3E-31 188.9 17.5 192 10-236 1-204 (218)
15 PRK14988 GMP/IMP nucleotidase; 99.9 6.6E-26 1.4E-30 185.6 20.5 204 9-243 7-222 (224)
16 PLN03243 haloacid dehalogenase 99.9 2.1E-26 4.6E-31 192.0 17.7 203 11-245 23-240 (260)
17 TIGR01454 AHBA_synth_RP 3-amin 99.9 2.8E-26 6.1E-31 185.6 17.3 193 15-240 1-204 (205)
18 PRK13222 phosphoglycolate phos 99.9 7.1E-26 1.5E-30 185.9 19.0 201 9-242 3-224 (226)
19 PLN02575 haloacid dehalogenase 99.9 7.5E-26 1.6E-30 195.4 19.1 202 11-245 130-348 (381)
20 PRK13225 phosphoglycolate phos 99.9 1.1E-25 2.3E-30 189.0 19.0 198 11-243 61-271 (273)
21 TIGR02254 YjjG/YfnB HAD superf 99.9 1.8E-25 3.8E-30 183.2 19.9 199 12-239 1-224 (224)
22 PRK09449 dUMP phosphatase; Pro 99.9 1.1E-25 2.4E-30 184.6 18.6 123 95-240 93-223 (224)
23 PRK13223 phosphoglycolate phos 99.9 5.9E-26 1.3E-30 191.1 17.3 201 10-242 11-232 (272)
24 PLN02940 riboflavin kinase 99.9 2.1E-25 4.5E-30 195.7 17.1 196 9-237 8-218 (382)
25 PRK10725 fructose-1-P/6-phosph 99.9 2.9E-25 6.2E-30 177.3 14.7 174 10-217 3-186 (188)
26 COG1011 Predicted hydrolase (H 99.9 2.2E-24 4.7E-29 177.4 19.1 124 95-241 97-228 (229)
27 COG0637 Predicted phosphatase/ 99.9 8.6E-25 1.9E-29 178.5 15.5 196 11-239 1-216 (221)
28 PRK10748 flavin mononucleotide 99.9 4.3E-24 9.4E-29 176.6 18.8 201 9-239 7-238 (238)
29 PRK06698 bifunctional 5'-methy 99.9 2.6E-24 5.6E-29 193.9 17.1 203 9-242 238-456 (459)
30 TIGR01428 HAD_type_II 2-haloal 99.9 4.7E-24 1E-28 171.7 16.2 104 94-220 89-195 (198)
31 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 6E-24 1.3E-28 169.1 14.1 170 12-216 1-185 (185)
32 PLN02779 haloacid dehalogenase 99.9 1.6E-23 3.5E-28 177.3 16.3 196 11-237 39-270 (286)
33 TIGR01990 bPGM beta-phosphoglu 99.9 9.9E-24 2.2E-28 167.9 13.4 169 14-217 1-185 (185)
34 TIGR02252 DREG-2 REG-2-like, H 99.9 6.3E-23 1.4E-27 165.8 17.5 173 13-215 1-203 (203)
35 PF13419 HAD_2: Haloacid dehal 99.9 1.3E-23 2.7E-28 165.0 9.7 168 15-216 1-176 (176)
36 PHA02597 30.2 hypothetical pro 99.9 9.6E-23 2.1E-27 163.9 13.7 183 11-237 1-196 (197)
37 TIGR02247 HAD-1A3-hyp Epoxide 99.9 7.8E-22 1.7E-26 160.3 16.0 102 95-219 92-198 (211)
38 PLN02919 haloacid dehalogenase 99.9 7E-22 1.5E-26 192.2 16.9 195 9-236 72-286 (1057)
39 TIGR00338 serB phosphoserine p 99.9 9.4E-22 2E-26 160.7 15.0 198 9-238 11-218 (219)
40 PRK09456 ?-D-glucose-1-phospha 99.9 3.2E-21 6.9E-26 155.3 17.3 121 73-220 64-188 (199)
41 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 1.4E-22 3E-27 160.8 9.2 97 96-216 84-183 (183)
42 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 1.2E-21 2.5E-26 154.6 10.7 161 14-209 1-175 (175)
43 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1E-20 2.2E-25 152.1 15.4 88 98-209 107-197 (197)
44 PLN02954 phosphoserine phospha 99.8 1E-19 2.3E-24 149.2 17.7 202 9-239 9-223 (224)
45 PLN02811 hydrolase 99.8 2.1E-20 4.6E-25 152.9 12.9 184 19-236 1-207 (220)
46 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 5.9E-20 1.3E-24 141.9 14.5 151 14-210 1-154 (154)
47 PRK08942 D,D-heptose 1,7-bisph 99.8 4E-20 8.6E-25 146.7 13.8 120 96-240 28-177 (181)
48 KOG3085 Predicted hydrolase (H 99.8 7.8E-20 1.7E-24 147.5 13.7 185 8-221 3-217 (237)
49 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 1.5E-19 3.3E-24 145.5 13.7 112 94-220 77-193 (201)
50 PRK06769 hypothetical protein; 99.8 1.5E-19 3.2E-24 142.2 12.6 121 96-239 27-171 (173)
51 PRK11133 serB phosphoserine ph 99.8 5.9E-19 1.3E-23 151.0 15.5 130 94-237 178-310 (322)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.6E-19 5.5E-24 141.4 11.8 128 95-236 24-175 (176)
53 PRK13582 thrH phosphoserine ph 99.8 7.3E-19 1.6E-23 142.1 13.2 195 12-245 1-201 (205)
54 TIGR01656 Histidinol-ppas hist 99.8 7.3E-19 1.6E-23 134.7 9.2 101 96-219 26-147 (147)
55 PRK09552 mtnX 2-hydroxy-3-keto 99.8 1.7E-18 3.8E-23 141.4 11.7 124 94-244 71-217 (219)
56 KOG2914 Predicted haloacid-hal 99.8 1.1E-17 2.3E-22 134.6 14.9 194 9-235 7-218 (222)
57 TIGR01691 enolase-ppase 2,3-di 99.8 5.2E-17 1.1E-21 131.8 17.4 103 94-221 92-200 (220)
58 TIGR01261 hisB_Nterm histidino 99.8 3.5E-18 7.6E-23 132.4 9.4 101 95-220 27-150 (161)
59 TIGR02137 HSK-PSP phosphoserin 99.8 2.6E-17 5.6E-22 132.4 14.1 192 13-242 2-198 (203)
60 TIGR01685 MDP-1 magnesium-depe 99.7 2.6E-18 5.7E-23 134.0 7.4 104 94-220 42-160 (174)
61 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 2.8E-17 6.1E-22 123.6 11.8 94 97-217 25-131 (132)
62 TIGR01672 AphA HAD superfamily 99.7 6.9E-17 1.5E-21 132.2 14.4 98 94-221 111-215 (237)
63 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 6.6E-16 1.4E-20 123.0 15.1 122 78-212 59-184 (188)
64 COG0560 SerB Phosphoserine pho 99.7 2.5E-16 5.4E-21 127.3 12.6 183 10-220 3-190 (212)
65 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 8.6E-17 1.9E-21 134.3 9.9 121 99-239 122-254 (257)
66 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 7.7E-17 1.7E-21 125.6 8.7 93 98-215 43-160 (166)
67 TIGR01670 YrbI-phosphatas 3-de 99.7 1.3E-16 2.8E-21 123.0 9.5 111 102-245 36-151 (154)
68 cd01427 HAD_like Haloacid deha 99.7 2.2E-16 4.8E-21 118.5 10.0 116 94-216 21-139 (139)
69 PRK09484 3-deoxy-D-manno-octul 99.7 2.4E-16 5.2E-21 125.1 9.2 116 104-252 58-181 (183)
70 TIGR02726 phenyl_P_delta pheny 99.7 1.5E-16 3.2E-21 123.9 6.6 96 103-230 43-139 (169)
71 TIGR03333 salvage_mtnX 2-hydro 99.6 1.3E-15 2.8E-20 124.1 10.8 128 95-244 68-213 (214)
72 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.6 3.5E-15 7.7E-20 124.1 12.5 70 166-235 171-249 (249)
73 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 9.4E-15 2E-19 117.8 14.4 109 96-217 86-198 (202)
74 TIGR01488 HAD-SF-IB Haloacid D 99.6 2.6E-15 5.6E-20 118.5 10.8 105 94-209 70-177 (177)
75 PLN02645 phosphoglycolate phos 99.6 1E-15 2.2E-20 131.3 8.1 72 170-241 227-309 (311)
76 PRK05446 imidazole glycerol-ph 99.6 1.1E-14 2.4E-19 125.6 13.6 113 94-240 27-162 (354)
77 TIGR01668 YqeG_hyp_ppase HAD s 99.6 1E-14 2.2E-19 114.3 12.0 93 97-221 43-140 (170)
78 TIGR01452 PGP_euk phosphoglyco 99.6 1.8E-15 4E-20 128.0 7.8 117 99-235 145-279 (279)
79 PRK11009 aphA acid phosphatase 99.6 3.7E-14 8E-19 116.0 13.9 109 80-221 98-215 (237)
80 PF06888 Put_Phosphatase: Puta 99.6 1.6E-13 3.6E-18 111.6 16.8 132 78-218 58-197 (234)
81 COG0647 NagD Predicted sugar p 99.6 2.2E-14 4.8E-19 118.8 11.6 219 8-242 4-268 (269)
82 PRK10444 UMP phosphatase; Prov 99.6 2.5E-14 5.4E-19 118.6 11.9 68 168-235 169-245 (248)
83 PRK01158 phosphoglycolate phos 99.6 4.8E-15 1E-19 121.9 7.2 72 172-243 155-229 (230)
84 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 2E-14 4.2E-19 107.4 9.0 85 97-208 29-126 (128)
85 PHA02530 pseT polynucleotide k 99.5 5.3E-14 1.1E-18 120.4 11.7 110 95-220 185-299 (300)
86 PRK10530 pyridoxal phosphate ( 99.5 2E-14 4.4E-19 121.1 8.4 71 172-243 197-271 (272)
87 COG2179 Predicted hydrolase of 99.5 7.7E-14 1.7E-18 105.0 10.4 80 107-218 59-139 (175)
88 smart00577 CPDc catalytic doma 99.5 4.5E-15 9.7E-20 113.8 3.4 93 95-213 43-138 (148)
89 PF00702 Hydrolase: haloacid d 99.5 2.3E-14 4.9E-19 116.4 7.6 88 95-210 125-215 (215)
90 TIGR01482 SPP-subfamily Sucros 99.5 2.4E-14 5.3E-19 117.3 5.6 63 172-234 147-210 (225)
91 COG0241 HisB Histidinol phosph 99.5 1.7E-12 3.7E-17 101.0 13.7 122 96-237 30-174 (181)
92 PF13242 Hydrolase_like: HAD-h 99.5 2.7E-13 5.8E-18 91.5 7.6 65 171-235 2-75 (75)
93 PRK11590 hypothetical protein; 99.4 1.6E-12 3.5E-17 105.6 12.7 105 96-217 94-202 (211)
94 KOG1615 Phosphoserine phosphat 99.4 9.5E-13 2.1E-17 101.3 9.4 128 94-235 85-221 (227)
95 COG0561 Cof Predicted hydrolas 99.4 1.5E-12 3.2E-17 109.4 10.4 73 172-244 187-262 (264)
96 TIGR01456 CECR5 HAD-superfamil 99.4 1.5E-11 3.2E-16 106.1 16.3 71 169-239 229-320 (321)
97 KOG3120 Predicted haloacid deh 99.4 4.1E-12 9E-17 99.7 11.5 155 79-246 72-250 (256)
98 PRK15126 thiamin pyrimidine py 99.4 6.7E-13 1.5E-17 112.0 7.1 75 172-246 186-265 (272)
99 TIGR01487 SPP-like sucrose-pho 99.4 3.8E-13 8.2E-18 109.6 4.9 61 172-232 145-206 (215)
100 PRK10513 sugar phosphate phosp 99.4 2.2E-12 4.8E-17 108.7 9.3 72 172-243 194-268 (270)
101 PRK10976 putative hydrolase; P 99.4 2.3E-12 4.9E-17 108.4 9.2 72 172-243 188-264 (266)
102 PRK00192 mannosyl-3-phosphogly 99.4 1.9E-11 4.1E-16 103.2 14.5 73 172-245 189-272 (273)
103 PLN02887 hydrolase family prot 99.4 1.9E-11 4.1E-16 112.0 14.5 71 172-242 505-578 (580)
104 TIGR01686 FkbH FkbH-like domai 99.3 5.3E-12 1.1E-16 108.9 9.9 87 98-212 32-125 (320)
105 TIGR01544 HAD-SF-IE haloacid d 99.3 9.5E-11 2.1E-15 97.6 15.0 121 76-209 104-230 (277)
106 COG1778 Low specificity phosph 99.3 1.9E-12 4.2E-17 96.3 4.2 97 102-230 43-140 (170)
107 PRK08238 hypothetical protein; 99.3 1.2E-10 2.6E-15 104.9 16.0 97 94-220 69-168 (479)
108 PRK03669 mannosyl-3-phosphogly 99.3 2.5E-11 5.5E-16 102.3 11.1 73 172-244 185-269 (271)
109 TIGR01663 PNK-3'Pase polynucle 99.3 1.2E-11 2.6E-16 111.9 8.4 89 98-211 198-305 (526)
110 COG4359 Uncharacterized conser 99.3 9.5E-11 2.1E-15 89.5 11.9 204 14-246 5-218 (220)
111 COG4229 Predicted enolase-phos 99.3 2.3E-10 5E-15 87.3 13.8 197 10-233 2-224 (229)
112 TIGR01460 HAD-SF-IIA Haloacid 99.3 1E-10 2.3E-15 96.5 12.8 50 170-219 185-236 (236)
113 KOG3040 Predicted sugar phosph 99.3 1.5E-11 3.2E-16 95.8 7.0 76 166-241 174-258 (262)
114 TIGR01545 YfhB_g-proteo haloac 99.3 1.2E-10 2.6E-15 94.3 12.6 105 96-217 93-201 (210)
115 TIGR02463 MPGP_rel mannosyl-3- 99.2 4.9E-11 1.1E-15 97.5 9.6 43 172-214 177-219 (221)
116 KOG2882 p-Nitrophenyl phosphat 99.2 3.2E-10 6.8E-15 93.6 11.9 79 161-239 212-303 (306)
117 PF12689 Acid_PPase: Acid Phos 99.2 4.2E-11 9E-16 92.8 5.4 98 94-219 42-153 (169)
118 PTZ00445 p36-lilke protein; Pr 99.1 5.1E-10 1.1E-14 88.4 9.7 52 169-220 153-208 (219)
119 TIGR02244 HAD-IG-Ncltidse HAD 99.1 5.2E-09 1.1E-13 90.0 15.7 124 95-218 182-324 (343)
120 TIGR01485 SPP_plant-cyano sucr 99.1 1.5E-09 3.1E-14 90.5 11.2 49 172-220 165-213 (249)
121 PF12710 HAD: haloacid dehalog 99.1 2.6E-10 5.6E-15 90.9 6.3 95 100-207 92-192 (192)
122 TIGR00099 Cof-subfamily Cof su 99.1 1.9E-10 4.1E-15 96.2 5.6 62 172-233 186-248 (256)
123 TIGR02471 sucr_syn_bact_C sucr 99.0 1.5E-09 3.3E-14 89.6 9.5 69 172-241 157-233 (236)
124 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 3.1E-09 6.6E-14 88.2 11.1 87 97-211 24-116 (242)
125 TIGR01533 lipo_e_P4 5'-nucleot 99.0 5.4E-09 1.2E-13 87.0 12.1 83 94-206 115-204 (266)
126 TIGR01486 HAD-SF-IIB-MPGP mann 98.9 4.4E-09 9.4E-14 88.0 9.3 71 172-242 174-255 (256)
127 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 1.2E-09 2.6E-14 90.6 4.6 95 99-217 140-241 (242)
128 PF08282 Hydrolase_3: haloacid 98.9 2E-09 4.3E-14 89.1 5.9 62 172-234 184-247 (254)
129 PF09419 PGP_phosphatase: Mito 98.9 1.9E-08 4.2E-13 77.7 10.8 76 112-220 79-167 (168)
130 PRK10187 trehalose-6-phosphate 98.8 2.6E-08 5.6E-13 83.7 10.4 72 172-246 172-247 (266)
131 PF06941 NT5C: 5' nucleotidase 98.8 9E-09 2E-13 82.2 6.8 119 81-241 57-187 (191)
132 PF08645 PNK3P: Polynucleotide 98.8 5E-09 1.1E-13 81.0 4.2 89 100-213 32-152 (159)
133 TIGR01512 ATPase-IB2_Cd heavy 98.8 2.5E-08 5.5E-13 91.9 8.4 112 95-240 360-479 (536)
134 TIGR01525 ATPase-IB_hvy heavy 98.7 3.8E-08 8.2E-13 91.2 8.4 110 95-239 382-499 (556)
135 TIGR01684 viral_ppase viral ph 98.7 5E-08 1.1E-12 81.3 8.0 104 100-203 149-264 (301)
136 PRK14502 bifunctional mannosyl 98.6 1.7E-07 3.7E-12 86.6 9.3 45 172-216 611-657 (694)
137 PHA03398 viral phosphatase sup 98.6 3.4E-07 7.3E-12 76.5 10.1 104 100-203 151-266 (303)
138 TIGR02251 HIF-SF_euk Dullard-l 98.6 2.8E-08 6.1E-13 77.1 3.1 96 96-217 41-139 (162)
139 TIGR02461 osmo_MPG_phos mannos 98.6 1.9E-07 4.1E-12 76.5 7.6 43 172-214 179-223 (225)
140 PRK12702 mannosyl-3-phosphogly 98.6 1.8E-06 3.9E-11 72.3 13.4 46 173-219 207-254 (302)
141 COG4087 Soluble P-type ATPase 98.6 5.6E-07 1.2E-11 65.3 8.9 115 96-242 29-149 (152)
142 TIGR01511 ATPase-IB1_Cu copper 98.6 3.1E-07 6.7E-12 85.2 9.5 108 96-239 404-518 (562)
143 PLN02382 probable sucrose-phos 98.5 1.1E-06 2.4E-11 78.3 11.7 74 172-245 173-262 (413)
144 TIGR01522 ATPase-IIA2_Ca golgi 98.5 4.9E-07 1.1E-11 88.1 9.7 137 97-240 528-671 (884)
145 PLN02423 phosphomannomutase 98.4 4.7E-06 1E-10 69.2 11.5 54 172-243 187-244 (245)
146 PF05116 S6PP: Sucrose-6F-phos 98.4 2.5E-07 5.3E-12 76.9 3.6 48 172-220 163-210 (247)
147 TIGR00685 T6PP trehalose-phosp 98.4 1.5E-06 3.2E-11 72.2 8.2 71 173-243 166-243 (244)
148 PLN02177 glycerol-3-phosphate 98.3 1.6E-05 3.5E-10 72.2 14.6 100 98-213 111-211 (497)
149 PRK10671 copA copper exporting 98.3 2.2E-06 4.7E-11 83.3 9.5 110 96-240 649-765 (834)
150 PTZ00174 phosphomannomutase; P 98.3 3.4E-07 7.4E-12 76.2 3.3 44 171-218 185-232 (247)
151 TIGR01675 plant-AP plant acid 98.3 8.7E-06 1.9E-10 66.2 10.4 98 94-219 117-224 (229)
152 COG4996 Predicted phosphatase 98.1 7.5E-06 1.6E-10 59.5 6.0 86 94-206 38-132 (164)
153 PF03767 Acid_phosphat_B: HAD 98.1 3.1E-06 6.6E-11 69.5 4.6 99 97-219 115-224 (229)
154 TIGR01116 ATPase-IIA1_Ca sarco 98.1 1.9E-05 4.1E-10 77.4 10.3 136 97-240 537-683 (917)
155 PF11019 DUF2608: Protein of u 98.1 0.00044 9.6E-09 57.5 16.1 116 100-221 87-213 (252)
156 PRK11033 zntA zinc/cadmium/mer 98.0 3.1E-05 6.7E-10 74.2 9.2 106 97-239 568-680 (741)
157 smart00775 LNS2 LNS2 domain. T 98.0 0.00015 3.2E-09 56.0 10.9 100 99-212 29-141 (157)
158 COG2503 Predicted secreted aci 97.9 9E-05 2E-09 59.8 8.9 94 78-205 107-208 (274)
159 PF05761 5_nucleotid: 5' nucle 97.9 4.4E-05 9.5E-10 68.4 7.8 122 96-217 182-324 (448)
160 COG5663 Uncharacterized conser 97.9 9.2E-05 2E-09 56.2 8.0 113 99-246 74-193 (194)
161 PF13344 Hydrolase_6: Haloacid 97.8 0.00018 3.9E-09 51.2 8.3 48 97-144 14-67 (101)
162 TIGR01680 Veg_Stor_Prot vegeta 97.8 0.0004 8.7E-09 57.7 11.4 104 94-219 142-251 (275)
163 TIGR01484 HAD-SF-IIB HAD-super 97.8 2.5E-05 5.5E-10 62.8 4.0 43 172-214 161-203 (204)
164 PRK14010 potassium-transportin 97.8 0.00017 3.7E-09 67.9 9.7 108 97-239 441-555 (673)
165 PF03031 NIF: NLI interacting 97.7 8.7E-06 1.9E-10 62.9 0.7 84 95-204 34-120 (159)
166 COG3700 AphA Acid phosphatase 97.7 0.00012 2.6E-09 56.2 5.9 78 108-217 128-211 (237)
167 TIGR01497 kdpB K+-transporting 97.6 0.00032 7E-09 66.0 9.3 109 97-240 446-561 (675)
168 TIGR01517 ATPase-IIB_Ca plasma 97.6 0.00019 4E-09 70.8 7.6 136 97-239 579-721 (941)
169 PRK01122 potassium-transportin 97.6 0.00056 1.2E-08 64.5 10.3 110 97-241 445-561 (679)
170 TIGR01524 ATPase-IIIB_Mg magne 97.5 0.00027 5.9E-09 69.0 7.9 133 97-239 515-654 (867)
171 TIGR01523 ATPase-IID_K-Na pota 97.5 0.00026 5.7E-09 70.3 7.7 136 97-239 646-798 (1053)
172 PRK10517 magnesium-transportin 97.5 0.00029 6.4E-09 68.9 7.4 133 97-239 550-689 (902)
173 COG2217 ZntA Cation transport 97.5 0.00046 9.9E-09 65.3 8.4 109 97-239 537-651 (713)
174 PRK15122 magnesium-transportin 97.5 0.00072 1.6E-08 66.3 9.8 134 97-240 550-690 (903)
175 COG4030 Uncharacterized protei 97.4 0.0043 9.3E-08 49.8 12.0 149 95-245 81-267 (315)
176 KOG2630 Enolase-phosphatase E- 97.4 0.0011 2.4E-08 53.2 8.2 111 97-236 123-249 (254)
177 TIGR01647 ATPase-IIIA_H plasma 97.4 0.00053 1.1E-08 66.0 7.4 138 97-239 442-586 (755)
178 TIGR02250 FCP1_euk FCP1-like p 97.3 0.00067 1.4E-08 52.2 6.4 80 95-202 56-139 (156)
179 COG0474 MgtA Cation transport 97.3 0.0006 1.3E-08 66.9 7.5 127 97-230 547-680 (917)
180 PRK14501 putative bifunctional 97.3 0.00067 1.4E-08 65.2 7.3 70 172-243 655-724 (726)
181 PLN02580 trehalose-phosphatase 97.3 0.0013 2.7E-08 57.8 7.9 71 172-243 299-377 (384)
182 KOG0202 Ca2+ transporting ATPa 97.3 0.00076 1.6E-08 63.5 6.8 134 97-241 584-729 (972)
183 TIGR01106 ATPase-IIC_X-K sodiu 97.2 0.0019 4.1E-08 64.1 9.9 136 97-239 568-736 (997)
184 TIGR01689 EcbF-BcbF capsule bi 97.1 0.0021 4.5E-08 47.5 6.9 45 98-144 25-87 (126)
185 COG3882 FkbH Predicted enzyme 97.0 0.0099 2.1E-07 52.9 10.9 82 106-211 267-348 (574)
186 TIGR02245 HAD_IIID1 HAD-superf 97.0 0.0034 7.4E-08 50.0 7.2 38 97-134 45-84 (195)
187 PF05152 DUF705: Protein of un 97.0 0.011 2.4E-07 49.2 10.2 99 105-203 153-260 (297)
188 PLN02645 phosphoglycolate phos 96.8 0.0064 1.4E-07 52.4 8.5 87 97-215 44-136 (311)
189 COG3769 Predicted hydrolase (H 96.7 0.024 5.2E-07 45.5 9.9 42 175-217 192-235 (274)
190 KOG0207 Cation transport ATPas 96.7 0.01 2.3E-07 56.6 9.0 99 97-229 723-825 (951)
191 TIGR01657 P-ATPase-V P-type AT 96.6 0.02 4.4E-07 57.4 11.4 144 97-241 656-853 (1054)
192 PLN02205 alpha,alpha-trehalose 96.6 0.0055 1.2E-07 59.6 7.2 74 172-245 760-847 (854)
193 TIGR01652 ATPase-Plipid phosph 96.4 0.011 2.4E-07 59.2 7.7 49 190-239 768-819 (1057)
194 COG5610 Predicted hydrolase (H 96.3 0.011 2.4E-07 52.2 6.0 114 80-216 80-201 (635)
195 TIGR01494 ATPase_P-type ATPase 96.1 0.032 7E-07 51.3 8.8 94 97-231 347-443 (499)
196 PLN02499 glycerol-3-phosphate 96.1 0.07 1.5E-06 48.3 10.3 97 99-216 98-196 (498)
197 PLN03190 aminophospholipid tra 96.0 0.019 4.2E-07 57.8 7.2 49 191-240 872-923 (1178)
198 TIGR01658 EYA-cons_domain eyes 96.0 0.05 1.1E-06 44.4 8.1 79 114-219 179-259 (274)
199 PF05822 UMPH-1: Pyrimidine 5' 95.8 0.031 6.7E-07 46.0 6.5 116 79-209 76-198 (246)
200 PLN03017 trehalose-phosphatase 95.2 0.12 2.6E-06 45.2 8.4 72 173-244 282-360 (366)
201 PLN02151 trehalose-phosphatase 95.1 0.091 2E-06 45.8 7.4 71 173-244 268-346 (354)
202 COG4502 5'(3')-deoxyribonucleo 94.7 0.061 1.3E-06 40.0 4.4 104 93-241 64-176 (180)
203 COG1877 OtsB Trehalose-6-phosp 94.7 0.093 2E-06 43.9 6.0 68 173-242 181-251 (266)
204 PF08235 LNS2: LNS2 (Lipin/Ned 94.4 0.39 8.6E-06 36.8 8.4 35 177-211 105-140 (157)
205 KOG0204 Calcium transporting A 94.3 0.1 2.2E-06 49.9 5.9 137 97-242 647-791 (1034)
206 PF06437 ISN1: IMP-specific 5' 94.0 1.6 3.5E-05 38.2 12.2 45 174-220 349-402 (408)
207 COG0647 NagD Predicted sugar p 93.7 0.65 1.4E-05 39.0 9.1 51 94-144 21-78 (269)
208 TIGR01484 HAD-SF-IIB HAD-super 93.7 0.058 1.3E-06 43.2 2.8 27 14-40 1-28 (204)
209 KOG0210 P-type ATPase [Inorgan 93.5 0.22 4.7E-06 46.7 6.4 128 98-254 712-847 (1051)
210 KOG2469 IMP-GMP specific 5'-nu 93.4 2.2 4.8E-05 37.6 12.0 117 102-218 206-334 (424)
211 COG2216 KdpB High-affinity K+ 93.1 0.28 6E-06 44.5 6.2 85 98-216 448-535 (681)
212 KOG3128 Uncharacterized conser 92.9 0.28 6E-06 40.3 5.4 119 79-209 124-247 (298)
213 TIGR01452 PGP_euk phosphoglyco 91.9 0.92 2E-05 38.3 7.8 84 98-214 19-108 (279)
214 PLN02580 trehalose-phosphatase 91.7 0.44 9.6E-06 42.1 5.9 35 96-130 140-176 (384)
215 KOG2470 Similar to IMP-GMP spe 90.1 0.76 1.6E-05 39.7 5.5 117 100-216 243-374 (510)
216 PF06189 5-nucleotidase: 5'-nu 89.3 4.3 9.4E-05 33.7 9.1 73 110-220 186-261 (264)
217 KOG0209 P-type ATPase [Inorgan 88.9 0.21 4.6E-06 47.7 1.5 30 191-220 807-836 (1160)
218 KOG2961 Predicted hydrolase (H 88.7 0.54 1.2E-05 35.6 3.3 34 188-221 137-171 (190)
219 KOG3107 Predicted haloacid deh 87.8 2.6 5.5E-05 36.9 7.1 78 114-219 374-453 (468)
220 PLN03064 alpha,alpha-trehalose 86.9 0.84 1.8E-05 45.1 4.3 35 97-131 622-660 (934)
221 PLN03063 alpha,alpha-trehalose 84.5 1.9 4.1E-05 42.2 5.4 79 172-250 676-791 (797)
222 KOG0206 P-type ATPase [General 83.9 1.1 2.5E-05 44.9 3.7 48 189-237 793-843 (1151)
223 TIGR02468 sucrsPsyn_pln sucros 83.5 8.8 0.00019 38.6 9.4 42 172-214 954-997 (1050)
224 PLN03017 trehalose-phosphatase 83.2 1.1 2.3E-05 39.5 2.8 28 13-40 112-144 (366)
225 TIGR00685 T6PP trehalose-phosp 82.9 0.68 1.5E-05 38.3 1.5 29 12-40 3-36 (244)
226 KOG3189 Phosphomannomutase [Li 82.2 1.6 3.5E-05 34.7 3.2 28 13-40 12-39 (252)
227 KOG1618 Predicted phosphatase 81.8 0.87 1.9E-05 38.8 1.7 20 13-32 36-55 (389)
228 PF02358 Trehalose_PPase: Treh 80.9 1.8 3.9E-05 35.5 3.3 59 173-231 164-233 (235)
229 PF06014 DUF910: Bacterial pro 80.5 0.86 1.9E-05 28.9 1.0 25 179-207 7-31 (62)
230 PRK14501 putative bifunctional 79.7 1.9 4E-05 41.8 3.5 30 11-40 491-525 (726)
231 PRK10444 UMP phosphatase; Prov 78.5 12 0.00025 31.1 7.4 47 97-143 17-69 (248)
232 PLN02205 alpha,alpha-trehalose 77.8 2.5 5.3E-05 41.7 3.6 30 11-40 595-627 (854)
233 PLN02151 trehalose-phosphatase 77.6 2.1 4.5E-05 37.5 2.8 28 13-40 99-131 (354)
234 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.5 3.7 8.1E-05 34.0 4.2 47 98-144 18-70 (249)
235 PLN03063 alpha,alpha-trehalose 75.9 13 0.00027 36.6 7.9 35 97-131 532-570 (797)
236 TIGR01458 HAD-SF-IIA-hyp3 HAD- 75.0 3.4 7.5E-05 34.4 3.4 47 98-144 22-74 (257)
237 TIGR02251 HIF-SF_euk Dullard-l 73.9 2.3 4.9E-05 32.8 1.9 15 13-27 2-16 (162)
238 KOG0203 Na+/K+ ATPase, alpha s 71.8 14 0.00031 36.0 6.8 128 100-229 596-746 (1019)
239 COG5083 SMP2 Uncharacterized p 69.1 2.9 6.2E-05 37.3 1.6 29 183-211 486-515 (580)
240 TIGR02250 FCP1_euk FCP1-like p 68.1 3.9 8.5E-05 31.3 2.1 17 12-28 6-22 (156)
241 KOG1618 Predicted phosphatase 67.8 7.1 0.00015 33.5 3.6 51 169-219 267-342 (389)
242 PLN02588 glycerol-3-phosphate 67.5 16 0.00035 33.6 6.0 33 98-131 134-166 (525)
243 COG4483 Uncharacterized protei 66.5 6.3 0.00014 25.1 2.3 27 178-208 6-32 (68)
244 TIGR01460 HAD-SF-IIA Haloacid 66.2 44 0.00095 27.3 8.1 48 97-144 14-68 (236)
245 PF02358 Trehalose_PPase: Treh 63.4 8.9 0.00019 31.4 3.5 25 16-40 1-30 (235)
246 KOG3040 Predicted sugar phosph 62.9 19 0.00041 29.1 4.9 85 98-216 24-115 (262)
247 PF06925 MGDG_synth: Monogalac 62.4 66 0.0014 24.7 8.0 86 101-197 80-166 (169)
248 COG4850 Uncharacterized conser 58.6 43 0.00093 29.0 6.6 80 96-204 195-292 (373)
249 KOG2456 Aldehyde dehydrogenase 57.4 82 0.0018 28.3 8.2 120 97-250 141-279 (477)
250 KOG2134 Polynucleotide kinase 56.4 6.9 0.00015 34.5 1.6 18 11-28 74-91 (422)
251 PRK00192 mannosyl-3-phosphogly 55.0 19 0.00041 30.1 4.1 32 105-136 32-63 (273)
252 PRK10513 sugar phosphate phosp 51.8 32 0.00069 28.5 5.0 37 106-142 32-68 (270)
253 COG0731 Fe-S oxidoreductases [ 51.2 1.4E+02 0.0029 25.7 8.5 128 95-244 90-242 (296)
254 PF10113 Fibrillarin_2: Fibril 50.5 40 0.00086 30.2 5.3 44 176-219 208-255 (505)
255 TIGR00715 precor6x_red precorr 48.1 39 0.00084 28.2 4.8 61 179-243 189-255 (256)
256 cd01766 Ufm1 Urm1-like ubiquit 47.3 30 0.00065 22.7 3.1 39 173-211 26-64 (82)
257 TIGR02461 osmo_MPG_phos mannos 46.7 34 0.00074 27.8 4.3 35 101-135 19-56 (225)
258 KOG0323 TFIIF-interacting CTD 46.4 24 0.00053 33.4 3.6 51 95-145 199-253 (635)
259 PF14336 DUF4392: Domain of un 45.4 1.5E+02 0.0032 25.3 8.0 31 174-208 163-193 (291)
260 TIGR01487 SPP-like sucrose-pho 45.4 40 0.00088 26.9 4.5 38 97-134 18-58 (215)
261 PRK08057 cobalt-precorrin-6x r 44.4 54 0.0012 27.3 5.1 62 178-243 181-247 (248)
262 KOG1605 TFIIF-interacting CTD 44.2 14 0.00031 30.9 1.6 90 97-212 131-223 (262)
263 TIGR02463 MPGP_rel mannosyl-3- 42.2 46 0.001 26.6 4.4 31 104-134 26-56 (221)
264 PF02571 CbiJ: Precorrin-6x re 42.2 46 0.00099 27.7 4.3 60 177-240 184-248 (249)
265 PRK01158 phosphoglycolate phos 42.0 46 0.001 26.7 4.4 36 100-135 23-61 (230)
266 PRK11840 bifunctional sulfur c 41.5 2.4E+02 0.0052 24.6 10.3 96 96-221 177-282 (326)
267 PF06506 PrpR_N: Propionate ca 41.5 1.1E+02 0.0023 23.8 6.2 37 178-219 113-152 (176)
268 PRK02228 V-type ATP synthase s 40.6 85 0.0018 22.0 4.9 23 192-215 2-24 (100)
269 PF10307 DUF2410: Hypothetical 40.4 1.9E+02 0.0042 23.1 7.9 77 111-209 72-152 (197)
270 PRK00994 F420-dependent methyl 39.5 2.2E+02 0.0048 23.6 8.9 44 173-219 73-118 (277)
271 TIGR00099 Cof-subfamily Cof su 37.8 55 0.0012 26.9 4.3 28 107-134 29-56 (256)
272 PF08282 Hydrolase_3: haloacid 37.7 51 0.0011 26.4 4.0 37 98-134 16-55 (254)
273 PRK15126 thiamin pyrimidine py 37.1 52 0.0011 27.4 4.0 29 106-134 31-59 (272)
274 PF01071 GARS_A: Phosphoribosy 36.0 2.3E+02 0.0049 22.7 7.3 83 177-261 4-87 (194)
275 COG0078 ArgF Ornithine carbamo 35.2 85 0.0018 26.9 4.9 40 177-217 139-184 (310)
276 CHL00162 thiG thiamin biosynth 35.2 2.7E+02 0.0059 23.4 8.6 114 96-245 117-240 (267)
277 COG0561 Cof Predicted hydrolas 35.0 71 0.0015 26.4 4.5 38 98-135 21-61 (264)
278 PRK10976 putative hydrolase; P 34.8 59 0.0013 26.9 4.0 29 106-134 31-59 (266)
279 PRK10530 pyridoxal phosphate ( 34.7 69 0.0015 26.4 4.4 35 100-134 23-60 (272)
280 KOG2882 p-Nitrophenyl phosphat 34.4 51 0.0011 28.2 3.4 38 97-134 38-81 (306)
281 KOG2116 Protein involved in pl 34.0 21 0.00046 33.7 1.2 68 176-243 635-708 (738)
282 PRK12702 mannosyl-3-phosphogly 33.7 78 0.0017 27.2 4.4 32 104-135 28-59 (302)
283 PF13911 AhpC-TSA_2: AhpC/TSA 33.2 1.7E+02 0.0037 20.5 5.8 37 103-142 6-42 (115)
284 PRK05406 LamB/YcsF family prot 32.6 1.9E+02 0.0041 24.1 6.4 88 173-260 110-219 (246)
285 PF01990 ATP-synt_F: ATP synth 32.1 1.1E+02 0.0024 21.0 4.4 38 193-243 1-38 (95)
286 PF11071 DUF2872: Protein of u 31.5 94 0.002 23.1 4.0 69 176-244 58-141 (141)
287 COG4018 Uncharacterized protei 31.3 1.2E+02 0.0026 26.5 5.1 43 177-219 209-255 (505)
288 PF04413 Glycos_transf_N: 3-De 31.3 36 0.00077 26.9 2.0 77 95-203 103-184 (186)
289 TIGR01486 HAD-SF-IIB-MPGP mann 30.0 93 0.002 25.6 4.4 31 104-134 26-56 (256)
290 TIGR02329 propionate_PrpR prop 29.9 3.3E+02 0.0072 25.5 8.3 33 183-220 141-173 (526)
291 TIGR01482 SPP-subfamily Sucros 29.7 1E+02 0.0022 24.6 4.5 27 107-133 28-54 (225)
292 PF09269 DUF1967: Domain of un 29.4 44 0.00096 21.6 1.9 24 177-200 43-66 (69)
293 PF03332 PMM: Eukaryotic phosp 29.3 55 0.0012 26.6 2.8 39 103-141 2-42 (220)
294 PF02593 dTMP_synthase: Thymid 29.3 62 0.0013 26.3 3.0 92 97-216 59-160 (217)
295 PF03332 PMM: Eukaryotic phosp 29.2 1E+02 0.0022 25.1 4.3 41 190-243 175-219 (220)
296 COG0019 LysA Diaminopimelate d 29.1 4.2E+02 0.0092 23.7 9.0 34 185-218 91-126 (394)
297 PF01993 MTD: methylene-5,6,7, 29.0 1.7E+02 0.0037 24.3 5.4 44 173-219 72-117 (276)
298 PRK06524 biotin carboxylase-li 28.5 4.8E+02 0.011 24.2 9.2 120 96-244 90-215 (493)
299 KOG0205 Plasma membrane H+-tra 28.3 2.6E+02 0.0056 27.1 7.1 124 100-230 495-625 (942)
300 COG0381 WecB UDP-N-acetylgluco 28.3 4.1E+02 0.0089 23.7 8.1 83 112-221 34-127 (383)
301 cd00886 MogA_MoaB MogA_MoaB fa 27.9 1.7E+02 0.0038 22.0 5.2 62 174-235 20-86 (152)
302 PRK13717 conjugal transfer pro 27.5 1.9E+02 0.0041 21.3 4.9 14 10-23 43-56 (128)
303 PF02350 Epimerase_2: UDP-N-ac 27.4 1.2E+02 0.0026 26.5 4.8 83 113-219 12-100 (346)
304 PF06901 FrpC: RTX iron-regula 27.3 33 0.00072 27.2 1.1 15 13-27 59-73 (271)
305 TIGR00236 wecB UDP-N-acetylglu 27.3 2.5E+02 0.0055 24.3 6.9 85 113-220 32-120 (365)
306 PRK03957 V-type ATP synthase s 27.2 1.8E+02 0.004 20.2 4.9 22 192-214 2-23 (100)
307 KOG2832 TFIIF-interacting CTD 27.2 1.2E+02 0.0026 26.7 4.6 78 98-201 215-294 (393)
308 PF05690 ThiG: Thiazole biosyn 27.0 3.7E+02 0.008 22.3 8.6 95 95-219 102-206 (247)
309 COG0052 RpsB Ribosomal protein 27.0 3.1E+02 0.0067 22.9 6.6 54 192-245 158-215 (252)
310 TIGR03595 Obg_CgtA_exten Obg f 26.9 70 0.0015 20.7 2.4 24 177-200 43-66 (69)
311 PF03671 Ufm1: Ubiquitin fold 25.8 24 0.00053 23.0 0.1 31 173-203 26-56 (76)
312 PRK03669 mannosyl-3-phosphogly 25.4 1.3E+02 0.0027 25.1 4.5 29 106-134 36-64 (271)
313 PRK14021 bifunctional shikimat 25.0 5.8E+02 0.013 23.9 9.3 34 185-218 264-303 (542)
314 PRK06425 histidinol-phosphate 24.9 4.4E+02 0.0095 22.5 8.5 90 113-239 59-148 (332)
315 TIGR01456 CECR5 HAD-superfamil 24.9 3.9E+02 0.0085 22.9 7.5 84 96-215 15-109 (321)
316 TIGR02667 moaB_proteo molybden 24.6 3.2E+02 0.007 20.9 7.5 61 175-235 23-88 (163)
317 PF13756 Stimulus_sens_1: Stim 23.6 50 0.0011 23.7 1.5 18 11-28 18-36 (112)
318 TIGR03674 fen_arch flap struct 23.2 23 0.00051 30.9 -0.4 43 98-144 131-173 (338)
319 PRK06856 DNA polymerase III su 23.1 1.6E+02 0.0036 21.7 4.1 55 178-235 52-110 (128)
320 KOG3157 Proline synthetase co- 22.9 89 0.0019 25.3 2.8 42 177-218 190-231 (244)
321 PF03603 DNA_III_psi: DNA poly 22.7 2.2E+02 0.0048 21.0 4.7 57 178-236 53-112 (128)
322 PF08620 RPAP1_C: RPAP1-like, 22.4 33 0.00071 22.6 0.3 9 16-24 4-12 (73)
323 cd04728 ThiG Thiazole synthase 22.3 4.6E+02 0.01 21.8 9.6 96 96-221 103-208 (248)
324 COG3453 Uncharacterized protei 22.2 3.3E+02 0.0071 20.1 6.0 48 172-219 43-97 (130)
325 PRK15424 propionate catabolism 21.9 6.8E+02 0.015 23.6 10.1 32 183-219 151-182 (538)
326 TIGR01485 SPP_plant-cyano sucr 21.8 2E+02 0.0043 23.5 4.9 25 110-134 37-61 (249)
327 cd06539 CIDE_N_A CIDE_N domain 21.5 58 0.0013 21.8 1.3 15 12-26 40-54 (78)
328 COG0378 HypB Ni2+-binding GTPa 21.4 1.9E+02 0.0042 23.2 4.4 66 172-237 23-92 (202)
329 cd06537 CIDE_N_B CIDE_N domain 21.3 58 0.0013 21.9 1.3 14 13-26 40-53 (81)
330 smart00266 CAD Domains present 20.9 60 0.0013 21.5 1.3 15 12-26 38-52 (74)
331 COG2241 CobL Precorrin-6B meth 20.8 4.6E+02 0.0099 21.2 10.5 47 173-219 100-149 (210)
332 cd00885 cinA Competence-damage 20.7 2.3E+02 0.0051 21.9 4.8 47 174-220 19-68 (170)
333 PF13382 Adenine_deam_C: Adeni 20.6 2.1E+02 0.0046 22.3 4.5 60 186-245 61-130 (171)
334 PRK05294 carB carbamoyl phosph 20.3 9.6E+02 0.021 24.8 10.3 69 176-244 670-738 (1066)
335 COG2089 SpsE Sialic acid synth 20.2 5.9E+02 0.013 22.3 9.2 116 100-242 137-263 (347)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.97 E-value=1.7e-30 Score=201.88 Aligned_cols=221 Identities=59% Similarity=1.010 Sum_probs=205.7
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhc
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG 89 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (265)
+++++++||+|.||++....+...+.+.+.+|+.+++|++......+...+++.||...+++...+...+.++++++.++
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~ 92 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG 92 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHhcCCCc-EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 90 KLPYEKLKPDPVLRNLLLSMPQR-KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 90 ~~~~~~~~~~p~~~~~l~~l~~~-~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
.++++.++|.|.++++|-.++.+ .++.||+...++...|+.+|+.++|+.|++.+...+. +-
T Consensus 93 ~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~-----------------~~ 155 (244)
T KOG3109|consen 93 RLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI-----------------EK 155 (244)
T ss_pred cCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-----------------CC
Confidence 99999999999999999999866 9999999999999999999999999999998755421 12
Q ss_pred ccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHhcCCh
Q 024578 169 RILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 247 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~~~ 247 (265)
..++||.+++++.+.+..|++ |++++||+||.++|..|++.||+++++........+++++.+.....+.+.++++.+.
T Consensus 156 ~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 156 TVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred ceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 356799999999999999997 9999999999999999999999999999988889999999999999999999987653
No 2
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.96 E-value=5.8e-29 Score=202.68 Aligned_cols=199 Identities=17% Similarity=0.211 Sum_probs=148.4
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCChHHHHHHHh
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFDNDEFHAFVH 88 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (265)
|++|+|+||+||||+|+...+..++.+ ..+.++....... .+....|...... .... ....+.+...+.
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~-----~~~~~~~~~~~~~----~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~ 70 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLH-----TLKTYYPNQYKRE----DVLPFIGPSLHDTFSKID-ESKVEEMITTYR 70 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHH-----HHHHhCCCCCCHH----HHHHHhCcCHHHHHHhcC-HHHHHHHHHHHH
Confidence 368999999999999988877777776 3444443221111 1222334433322 1111 111222222221
Q ss_pred cc---ccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 89 GK---LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 89 ~~---~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
.. .......++||+.++|+.+ +.+++|+||+....+...++.+|+..+|+.++++++....
T Consensus 71 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~------------- 137 (214)
T PRK13288 71 EFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHA------------- 137 (214)
T ss_pred HHHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCC-------------
Confidence 11 1123467899999999887 4789999999999999999999999999999998887764
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIK 236 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~ 236 (265)
||+++.+++++++++++|+++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.++.
T Consensus 138 ----------Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~ 207 (214)
T PRK13288 138 ----------KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLL 207 (214)
T ss_pred ----------CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHH
Confidence 9999999999999999999999999999999999999999999988743 346899999999999
Q ss_pred HHHHH
Q 024578 237 EAIPE 241 (265)
Q Consensus 237 ~~l~~ 241 (265)
+++..
T Consensus 208 ~~i~~ 212 (214)
T PRK13288 208 AIVGD 212 (214)
T ss_pred HHHhh
Confidence 87754
No 3
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=3.3e-28 Score=200.15 Aligned_cols=198 Identities=20% Similarity=0.148 Sum_probs=147.3
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCC---h----
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD---N---- 80 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~---- 80 (265)
..|+|+|+||+||||+|+...+..++.. .++.+|.+......... ..|...... ........ .
T Consensus 9 ~~~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 79 (229)
T PRK13226 9 VRFPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLRP----VVSKGARAMLAVAFPELDAAARDALI 79 (229)
T ss_pred cccCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhhhHHHHHHHHHhccCChHHHHHHH
Confidence 3467999999999999988877777765 66777765433222211 122222111 11111111 1
Q ss_pred HHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 81 DEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
..+...+.+.+ .....++||+.++|+.| +.+++|+||+........++.+++..+|+.++++++.+..
T Consensus 80 ~~~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-------- 150 (229)
T PRK13226 80 PEFLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER-------- 150 (229)
T ss_pred HHHHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC--------
Confidence 22233332222 13468899999999887 4789999999999999999999999999999888876654
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-------CCCCCceec
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-------VPPADHALN 230 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-------~~~a~~~v~ 230 (265)
||+|+++.++++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++
T Consensus 151 ---------------KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~ 215 (229)
T PRK13226 151 ---------------KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE 215 (229)
T ss_pred ---------------CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC
Confidence 9999999999999999999999999999999999999999999987753 246999999
Q ss_pred CHhHHHHHH
Q 024578 231 SIHNIKEAI 239 (265)
Q Consensus 231 ~~~el~~~l 239 (265)
++.+|.+.+
T Consensus 216 ~~~el~~~~ 224 (229)
T PRK13226 216 QPQLLWNPA 224 (229)
T ss_pred CHHHHHHHh
Confidence 999998865
No 4
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.96 E-value=1.2e-27 Score=190.37 Aligned_cols=183 Identities=58% Similarity=0.961 Sum_probs=149.0
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhccccC
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY 93 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (265)
+|+||+||||+|+...+..++.+++.++....+|++..........++..+|.....+... .....+.+...+.+....
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLPY 80 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCCH
Confidence 6999999999999999999998888877778889877665554444455556544443322 234556677777664444
Q ss_pred CCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 94 EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
..+.++||+.++|+.++.+++|+||++...+...++.+|+..+|+.++++++.+.. ...+|
T Consensus 81 ~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~-------------------~~~~K 141 (184)
T TIGR01993 81 EKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD-------------------YLLPK 141 (184)
T ss_pred HhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc-------------------cCCCC
Confidence 56789999999999999899999999999999999999999999999999877641 00139
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
|+|++|+.+++++|++|+++++|||+..|+.+|+++|+.++++
T Consensus 142 P~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 142 PSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 9999999999999999999999999999999999999999875
No 5
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.96 E-value=3.4e-28 Score=198.80 Aligned_cols=201 Identities=22% Similarity=0.256 Sum_probs=152.4
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHH--cCCC------CCh
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA--VGYE------FDN 80 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~ 80 (265)
+|+++.|+||+||||+|+...+..++.. ..+.++.+....... ....|........ .+.. ...
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEI----RQLIGLGLDELIERLLGEADEEAAAELV 71 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhcCCHHHHHHHHhccccchhHHHHH
Confidence 3678999999999999999888888775 677788775333221 2222332221111 1110 011
Q ss_pred HHHHHHHhccccCC-CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 81 DEFHAFVHGKLPYE-KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
+.+...+.+.+... ...++||+.++|+.+ +++++|+||.+...++..++.+|+..+|+.++++++...+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~------- 144 (220)
T COG0546 72 ERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP------- 144 (220)
T ss_pred HHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC-------
Confidence 22222222222111 257899999999888 5899999999999999999999999999999996666554
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceec
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALN 230 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~ 230 (265)
||+|..+..+++++|++|++++||||+.+|+.+|++||+.++++.+|.. ...+++++.
T Consensus 145 ----------------KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~ 208 (220)
T COG0546 145 ----------------KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID 208 (220)
T ss_pred ----------------CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC
Confidence 9999999999999999988999999999999999999999999988752 567999999
Q ss_pred CHhHHHHHHHH
Q 024578 231 SIHNIKEAIPE 241 (265)
Q Consensus 231 ~~~el~~~l~~ 241 (265)
++.||...+..
T Consensus 209 ~~~el~~~l~~ 219 (220)
T COG0546 209 SLAELLALLAE 219 (220)
T ss_pred CHHHHHHHHhc
Confidence 99999987753
No 6
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=1.1e-27 Score=199.21 Aligned_cols=194 Identities=23% Similarity=0.274 Sum_probs=142.8
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCC----ChhhHHHHHHHHHHHhcccHHHH-HHcCC-CCC---
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHI----DESEVPRMCLELYREHGTTMAGL-KAVGY-EFD--- 79 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~--- 79 (265)
..++|+|+||+||||+|+...+..++.+. .+.+|. +... .... ....|...... ..... ...
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~-----~~~~g~~~g~~~~~-~~~~---~~~~G~~~~~~~~~~~~~~~~~~~ 89 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREM-----LQEINFNGGVPITE-EFFV---ENIAGKHNEDIALGLFPDDLERGL 89 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHH-----HHHhccccCCCCCH-HHHH---HHcCCCCHHHHHHHHcCcchhhHH
Confidence 44689999999999999988888788764 344432 2211 1111 11123222211 11100 000
Q ss_pred --hHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 80 --NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
...+...+.+.. .....++||+.++|+.| +++++|+||+....++..++++++..+|+.++++++....
T Consensus 90 ~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~----- 163 (248)
T PLN02770 90 KFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHA----- 163 (248)
T ss_pred HHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCC-----
Confidence 011122222211 14578899999999887 5899999999999999999999999999999999988764
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCcee
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHAL 229 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v 229 (265)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++
T Consensus 164 ------------------KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi 225 (248)
T PLN02770 164 ------------------KPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI 225 (248)
T ss_pred ------------------CCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe
Confidence 9999999999999999999999999999999999999999999987643 45799999
Q ss_pred cCHhHH
Q 024578 230 NSIHNI 235 (265)
Q Consensus 230 ~~~~el 235 (265)
+++.++
T Consensus 226 ~~~~e~ 231 (248)
T PLN02770 226 KDYEDP 231 (248)
T ss_pred ccchhh
Confidence 999993
No 7
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=1.8e-27 Score=194.88 Aligned_cols=198 Identities=20% Similarity=0.206 Sum_probs=144.4
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHHHHcCCCCChHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGLKAVGYEFDNDEFH 84 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 84 (265)
+.+|+|+||+||||+|+...+..++.+ ..+.+|++..... .... ..+... ......+.....+.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLEE-VFKR---FKGVKLYEIIDIISKEHGVTLAKAELE 72 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHHH-HHHH---hcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 458999999999999987777777665 5566776543211 1111 112211 1223345554445554
Q ss_pred HHHhccc---cCCCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccc-eeeecCCCCCCCCCCCCCCCcc
Q 024578 85 AFVHGKL---PYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 85 ~~~~~~~---~~~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd-~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
..+.+.+ ......++||+.++|+.++.+++|+||+....+...++++++..+|+ .++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~----------- 141 (221)
T PRK10563 73 PVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRW----------- 141 (221)
T ss_pred HHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCC-----------
Confidence 4333211 12457889999999999999999999999999999999999999996 67777777764
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIK 236 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~ 236 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++..+.. ...++.++.++.||.
T Consensus 142 ------------KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (221)
T PRK10563 142 ------------KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLP 209 (221)
T ss_pred ------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998864322 223445566666666
Q ss_pred HHH
Q 024578 237 EAI 239 (265)
Q Consensus 237 ~~l 239 (265)
+.+
T Consensus 210 ~~~ 212 (221)
T PRK10563 210 ELW 212 (221)
T ss_pred HHH
Confidence 543
No 8
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.95 E-value=6.4e-27 Score=196.86 Aligned_cols=203 Identities=13% Similarity=0.067 Sum_probs=146.4
Q ss_pred cCCccEEEEecCCCccCCcccH-HHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH---------------HHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGF-NLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLK 72 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 72 (265)
||++|+|+||+||||+|+.... ..++.+ +++.+|.+... ... ....|.... ...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-EEA----RGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-HHH----HHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 4568999999999999975433 455554 44556664322 111 111221110 011
Q ss_pred HcCCCCChHHHH-------HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-ceee
Q 024578 73 AVGYEFDNDEFH-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGII 141 (265)
Q Consensus 73 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~ 141 (265)
..+.......+. ..+.+.+ .....++||+.++|+.| +++++|+||.....+...++.+++..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 223322222221 1111111 24568899999999888 4899999999999999999998887774 8899
Q ss_pred ecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 142 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
++++.... ||+|+.+..+++++|+. |++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 150 ~~~~~~~~-----------------------KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 206 (267)
T PRK13478 150 TTDDVPAG-----------------------RPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSG 206 (267)
T ss_pred cCCcCCCC-----------------------CCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCc
Confidence 88887664 99999999999999996 6999999999999999999999999998764
Q ss_pred C-----------------------------CCCCCceecCHhHHHHHHHHHhcC
Q 024578 221 P-----------------------------VPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 221 ~-----------------------------~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
. ..+++++++++.+|.+++..+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~ 260 (267)
T PRK13478 207 NELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEAR 260 (267)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHH
Confidence 3 457999999999999988766443
No 9
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.95 E-value=1.1e-26 Score=190.09 Aligned_cols=196 Identities=15% Similarity=0.171 Sum_probs=144.9
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-H----HcCCCC-ChHHH--
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-K----AVGYEF-DNDEF-- 83 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~-~~~~~-- 83 (265)
+|+|+||+||||+|+.+.+..++.+ +.+.+|.+....... .. ..|.....+ . ..+... ..+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEVQ-SA---WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHHH-Hh---hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 5899999999999988888777776 445567654332111 10 123322221 1 112211 11112
Q ss_pred --HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc--cccceeeecCCCCCCCCCCCCC
Q 024578 84 --HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 84 --~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~--~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.+.+.+.+......++||+.++|+.+ +++++|+||+....+...++.+++. .+|+.++++++....
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~------- 144 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAG------- 144 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCC-------
Confidence 22222222223468999999999988 4889999999999999999999998 999999999987663
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceE-EEECCCCC------CCCCCce
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP------VPPADHA 228 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~------~~~a~~~ 228 (265)
||+|+++..+++++|+. |++|++|||+.+|+.+|+++|+.+ +++.++.. ...++++
T Consensus 145 ----------------KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~ 208 (220)
T TIGR03351 145 ----------------RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHV 208 (220)
T ss_pred ----------------CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCcee
Confidence 99999999999999997 799999999999999999999999 88877643 3568899
Q ss_pred ecCHhHHHHHH
Q 024578 229 LNSIHNIKEAI 239 (265)
Q Consensus 229 v~~~~el~~~l 239 (265)
+.++.+|.+++
T Consensus 209 i~~~~~l~~~~ 219 (220)
T TIGR03351 209 LDSVADLPALL 219 (220)
T ss_pred ecCHHHHHHhh
Confidence 99999987754
No 10
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.95 E-value=1.1e-26 Score=190.24 Aligned_cols=200 Identities=27% Similarity=0.363 Sum_probs=139.7
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChh--hHHHHHHHHHHHhccc-----HHHHHHcCCCCChHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES--EVPRMCLELYREHGTT-----MAGLKAVGYEFDNDEF 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 83 (265)
|+++|+||+||||+|+.+.+..++...... ...+|.+.. .............+.. .......+........
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLV 78 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHH
Confidence 378999999999999888777665543222 334444422 2211111111222111 1111112211111111
Q ss_pred HHHHhc--cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 84 HAFVHG--KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 84 ~~~~~~--~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
...... ......+.++||+.++|+.| +.+++|+||+....+...++.+|+..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--------- 149 (221)
T TIGR02253 79 AAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVE--------- 149 (221)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCC---------
Confidence 111111 01123468899999999987 4789999999999999999999999999999999988774
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC-------CCCCCceec
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADHALN 230 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~-------~~~a~~~v~ 230 (265)
||+++.|+.+++++|++|+++++|||+. +|+.+|+++|+.++++.++.. ...+++++.
T Consensus 150 --------------KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~ 215 (221)
T TIGR02253 150 --------------KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEIS 215 (221)
T ss_pred --------------CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeC
Confidence 9999999999999999999999999998 899999999999999987643 235788888
Q ss_pred CHhHH
Q 024578 231 SIHNI 235 (265)
Q Consensus 231 ~~~el 235 (265)
++.+|
T Consensus 216 ~~~el 220 (221)
T TIGR02253 216 SLREL 220 (221)
T ss_pred cHHhh
Confidence 88776
No 11
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.95 E-value=5.4e-27 Score=192.14 Aligned_cols=196 Identities=19% Similarity=0.183 Sum_probs=145.9
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-----HHcCC-CCChHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGY-EFDNDE 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~ 82 (265)
.+++|+|+||+||||+|+.+.+..++.+ +.+.+|.+....... ....|...... ...+. ......
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 74 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREEL----PDTLGLRIDQVVDLWYARQPWNGPSRQE 74 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHH----HHhhCCCHHHHHHHHHHhcCCCCCCHHH
Confidence 4468999999999999988777777765 566677654332221 12222222111 11111 112222
Q ss_pred HHH----HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 83 FHA----FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 83 ~~~----~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
+.. .+.+. ......++||+.++|+.+ +.+++|+||+....++..++.+++..+|+.++++++.+..
T Consensus 75 ~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------ 147 (222)
T PRK10826 75 VVQRIIARVISL-IEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYS------ 147 (222)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCC------
Confidence 222 22111 124578999999999887 4899999999999999999999999999999999887664
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceec
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALN 230 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~ 230 (265)
||+++.++.+++++|++|++|++|||+.+|+.+|+++|+.++++..+.. ...++.++.
T Consensus 148 -----------------Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (222)
T PRK10826 148 -----------------KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE 210 (222)
T ss_pred -----------------CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc
Confidence 9999999999999999999999999999999999999999999987653 236888999
Q ss_pred CHhHHHH
Q 024578 231 SIHNIKE 237 (265)
Q Consensus 231 ~~~el~~ 237 (265)
++.||..
T Consensus 211 ~~~dl~~ 217 (222)
T PRK10826 211 SLTELTA 217 (222)
T ss_pred CHHHHhh
Confidence 9999864
No 12
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.95 E-value=8.5e-27 Score=189.69 Aligned_cols=191 Identities=24% Similarity=0.279 Sum_probs=142.3
Q ss_pred EEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChH---HH---
Q 024578 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDND---EF--- 83 (265)
Q Consensus 15 iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~--- 83 (265)
|+||+||||+|+...+..++.. ..+.+|.+....... ....|.... .+...+...+.. .+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARV----IGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999988777776654 556677653332221 122233221 112222222221 22
Q ss_pred -HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 84 -HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 84 -~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
...+.+.. .....++||+.++|+.+ +.+++|+||+....++..++++++..+|+.++++++....
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------- 140 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQR---------- 140 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCC----------
Confidence 22222211 13468899999999887 4789999999999999999999999999999998877664
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHh
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 233 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~ 233 (265)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.
T Consensus 141 -------------Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 141 -------------KPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred -------------CCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHH
Confidence 9999999999999999999999999999999999999999999977643 356899999999
Q ss_pred HHHHH
Q 024578 234 NIKEA 238 (265)
Q Consensus 234 el~~~ 238 (265)
+|..+
T Consensus 208 ~l~~~ 212 (213)
T TIGR01449 208 ELPPL 212 (213)
T ss_pred HHHhh
Confidence 98764
No 13
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.95 E-value=1.9e-26 Score=192.56 Aligned_cols=194 Identities=13% Similarity=0.057 Sum_probs=141.2
Q ss_pred ccEEEEecCCCccCCccc-HHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH---------------HHHHcC
Q 024578 12 YECLLFDLDDTLYPLSTG-FNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLKAVG 75 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 75 (265)
+|+|+||+||||+|+... +..++.+ ..+.+|.+... ... ....|.... .....+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVE-----AFAEFGVQITL-EEA----RGPMGLGKWDHIRALLKMPAVAERWRAKFG 71 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHH-----HHHHcCCCccH-HHH----HHhcCccHHHHHHHHhcCHHHHHHHHHHhC
Confidence 689999999999997553 3455554 34556654321 111 111121110 112223
Q ss_pred CCCChHHHH---HHHh----ccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-ceeeecC
Q 024578 76 YEFDNDEFH---AFVH----GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFE 144 (265)
Q Consensus 76 ~~~~~~~~~---~~~~----~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~~~~ 144 (265)
.....+.+. ..+. +.+ .....++||+.++|+.| +++++|+||.....++..++.+++..+| +.+++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~ 150 (253)
T TIGR01422 72 RLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTD 150 (253)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccc
Confidence 322222221 1221 111 24578999999999888 4889999999999999999999999885 8999998
Q ss_pred CCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCCC--
Q 024578 145 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-- 221 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-- 221 (265)
+.... ||+|+.+..+++++|+. |++|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 151 ~~~~~-----------------------KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~ 207 (253)
T TIGR01422 151 DVPAG-----------------------RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNEL 207 (253)
T ss_pred cCCCC-----------------------CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCccc
Confidence 87764 99999999999999995 99999999999999999999999999987653
Q ss_pred ---------------------------CCCCCceecCHhHHHHHH
Q 024578 222 ---------------------------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 222 ---------------------------~~~a~~~v~~~~el~~~l 239 (265)
..+++++++++.+|.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 208 GLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred CCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 356899999999987754
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.95 E-value=1.5e-26 Score=188.92 Aligned_cols=192 Identities=21% Similarity=0.218 Sum_probs=140.1
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCCCChHHHHHHHh
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYEFDNDEFHAFVH 88 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (265)
|++|+|+||+||||+|+...+..++.+ .++.+|++.... ... ..|.... .+.........+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~---~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEV---LNF---IHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHH---HHH---HcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 357999999999999988888787776 566777754211 111 1132222 1122211112222222111
Q ss_pred c-----cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 89 G-----KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 89 ~-----~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
. ........++||+.++|+.| +++++|+||+........++..++ .+|+.++++++....
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~----------- 137 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRG----------- 137 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCC-----------
Confidence 1 11124678899999999887 489999999998888888888887 457888888776654
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 236 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~ 236 (265)
||+|+.+..+++++|++|++|++|||+..|+.+|+++|+.++++.++.. ...++++++++.+|.
T Consensus 138 ------------KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 138 ------------KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ------------CCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999999999999999999999987643 346889999988874
No 15
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.95 E-value=6.6e-26 Score=185.64 Aligned_cols=204 Identities=17% Similarity=0.217 Sum_probs=143.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhccc-----HHH-HHHcCCCCChHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-----MAG-LKAVGYEFDNDE 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~ 82 (265)
.+.+|+|+||+||||+|+... ...+.+...+.+.+..|.+...............+.. ... ....+.. ...
T Consensus 7 ~~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 83 (224)
T PRK14988 7 WQDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICA 83 (224)
T ss_pred cccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHH
Confidence 456899999999999995311 2233333334455777876543322211111111110 011 1111111 111
Q ss_pred HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 83 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+... ......++||+.++|+.+ +.+++|+||+....+...++++|+..+|+.++++++.+..
T Consensus 84 ~~~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~---------- 148 (224)
T PRK14988 84 MTTE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYP---------- 148 (224)
T ss_pred HHHH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCC----------
Confidence 1111 124578899999999888 4789999999999999999999999999999999988764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCC--CCCCCceecCHhHHH
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP--VPPADHALNSIHNIK 236 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~--~~~a~~~v~~~~el~ 236 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+++ +++.++.. ...+.....+++++.
T Consensus 149 -------------KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 215 (224)
T PRK14988 149 -------------KEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYR 215 (224)
T ss_pred -------------CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHH
Confidence 99999999999999999999999999999999999999975 66766554 345666778888888
Q ss_pred HHHHHHh
Q 024578 237 EAIPEIW 243 (265)
Q Consensus 237 ~~l~~~~ 243 (265)
+++..++
T Consensus 216 ~~~~~l~ 222 (224)
T PRK14988 216 RLIPSLM 222 (224)
T ss_pred HHhhhhc
Confidence 8877764
No 16
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.95 E-value=2.1e-26 Score=192.05 Aligned_cols=203 Identities=13% Similarity=0.167 Sum_probs=147.5
Q ss_pred CccEEEEecCCCccCCcccHH-HHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHc-CCCCChH---HHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFN-LACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-GYEFDND---EFH 84 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~---~~~ 84 (265)
.+|+|+|||||||+||...++ .++.+ +.+.+|++...... .....|...... ... ....... .+.
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~ 93 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRLA 93 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHHH
Confidence 589999999999999865544 45554 66677776433211 112234332221 111 1111111 111
Q ss_pred HHHhc---cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 85 AFVHG---KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 85 ~~~~~---~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
..+.. ........++||+.++|+.| +++++|+||.....++..++++++..+|+.++++++....
T Consensus 94 ~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~--------- 164 (260)
T PLN03243 94 IRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRG--------- 164 (260)
T ss_pred HHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCC---------
Confidence 11111 11113467899999999888 4899999999999999999999999999999999988764
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHH
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNI 235 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el 235 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+... ...+++++.++.+|
T Consensus 165 --------------KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el 230 (260)
T PLN03243 165 --------------KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDL 230 (260)
T ss_pred --------------CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHH
Confidence 9999999999999999999999999999999999999999999963221 34589999999998
Q ss_pred HHHHHHHhcC
Q 024578 236 KEAIPEIWEG 245 (265)
Q Consensus 236 ~~~l~~~~~~ 245 (265)
......-++-
T Consensus 231 ~~~~~~~~~~ 240 (260)
T PLN03243 231 SVVDLKNLSD 240 (260)
T ss_pred HHHHHhhhhc
Confidence 8766555443
No 17
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.95 E-value=2.8e-26 Score=185.64 Aligned_cols=193 Identities=20% Similarity=0.256 Sum_probs=143.6
Q ss_pred EEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHH-HHHcCCCCC-hHHHHHHHhcccc
Q 024578 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFD-NDEFHAFVHGKLP 92 (265)
Q Consensus 15 iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ 92 (265)
|+||+||||+|+...+..++.+.+. +..+.+...... .....|..... +...+.... ...+.....+ .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYR----EVVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHH----HhcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 6899999999988888888876322 223543222221 12222333222 222332211 1112111211 1
Q ss_pred CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 93 YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 93 ~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++++||+.++|+.+ +.+++|+||+....+...++++++..+|+.++++++....
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-------------------- 130 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRP-------------------- 130 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCC--------------------
Confidence 24678999999999987 5889999999999999999999999999999998877654
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~~~l~ 240 (265)
||+++.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.+|.. ...++++++++.+|..++.
T Consensus 131 ---KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 131 ---KPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred ---CCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988753 4568999999999987654
No 18
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=7.1e-26 Score=185.88 Aligned_cols=201 Identities=20% Similarity=0.238 Sum_probs=148.6
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHH-----HHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 83 (265)
.+++++|+||+||||+|+...+..++.+ ..+.++.+......... ..+..... +...+...+.+..
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVRT----WVGNGADVLVERALTWAGREPDEELL 73 (226)
T ss_pred CCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhCccHHHHHHHHHhhccCCccHHHH
Confidence 4668999999999999987776666654 45566765433222211 12222111 1111122222222
Q ss_pred H-------HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCC
Q 024578 84 H-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 153 (265)
Q Consensus 84 ~-------~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~ 153 (265)
. ..+.... .....++||+.++++.+ +.+++|+||+.....+..++.+++..+|+.++++++....
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---- 148 (226)
T PRK13222 74 EKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK---- 148 (226)
T ss_pred HHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC----
Confidence 2 2222111 13567899999999887 4789999999999999999999999999999988876653
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCc
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 227 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~ 227 (265)
||++++++.++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++
T Consensus 149 -------------------kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~ 209 (226)
T PRK13222 149 -------------------KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDV 209 (226)
T ss_pred -------------------CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCE
Confidence 9999999999999999999999999999999999999999999987653 346889
Q ss_pred eecCHhHHHHHHHHH
Q 024578 228 ALNSIHNIKEAIPEI 242 (265)
Q Consensus 228 ~v~~~~el~~~l~~~ 242 (265)
++.++.+|..++.+-
T Consensus 210 ~i~~~~~l~~~l~~~ 224 (226)
T PRK13222 210 VIDHFAELLPLLGLA 224 (226)
T ss_pred EECCHHHHHHHHHHh
Confidence 999999999987653
No 19
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.94 E-value=7.5e-26 Score=195.43 Aligned_cols=202 Identities=15% Similarity=0.205 Sum_probs=148.2
Q ss_pred CccEEEEecCCCccCCcccHHH-HHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHc-CCCCCh---HHH-
Q 024578 11 NYECLLFDLDDTLYPLSTGFNL-ACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-GYEFDN---DEF- 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~---~~~- 83 (265)
..++||||+||||+|+...+.. ++.+ +.+.+|.+...... .....|...... ... ...... +.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~ 200 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELRRMA 200 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHHHHH
Confidence 5799999999999998775554 4443 55667775433211 122334433322 111 111111 112
Q ss_pred ---HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 84 ---HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 84 ---~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
.+.+.+.. .....++||+.++|+.| +++++|+||.....++..++.+|+..+|+.++++++....
T Consensus 201 ~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~-------- 271 (381)
T PLN02575 201 TRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRG-------- 271 (381)
T ss_pred HHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCC--------
Confidence 22222211 13467899999999888 5899999999999999999999999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhH
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHN 234 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~e 234 (265)
||+|++|..+++++|++|++|++|||+..|+.+|+++|+.++++.++.. ...++++++++.|
T Consensus 272 ---------------KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~E 336 (381)
T PLN02575 272 ---------------KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDE 336 (381)
T ss_pred ---------------CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHH
Confidence 9999999999999999999999999999999999999999999987543 3358899999999
Q ss_pred H-HHHHHHHhcC
Q 024578 235 I-KEAIPEIWEG 245 (265)
Q Consensus 235 l-~~~l~~~~~~ 245 (265)
| ...++.++..
T Consensus 337 L~~~~l~~l~~~ 348 (381)
T PLN02575 337 LSIVDLKNLADI 348 (381)
T ss_pred HHHHHHhhhhhc
Confidence 8 4445555443
No 20
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=1.1e-25 Score=188.99 Aligned_cols=198 Identities=16% Similarity=0.208 Sum_probs=147.2
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCCC-ChHHHHHHHh
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYEF-DNDEFHAFVH 88 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 88 (265)
++|+++||+||||+||.+.+..++.+ +.+.+|.+....... ....+.... .+...+... ..+.+...+.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~~----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERDY----AQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 58999999999999988887777765 567777753322211 111222222 122223211 1112222111
Q ss_pred ccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 89 GKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 89 ~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
+.+ ....++++||+.++|+.| +++++|+||+....+...++.+|+..+|+.+++++..
T Consensus 132 ~~~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~----------------- 194 (273)
T PRK13225 132 RQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI----------------- 194 (273)
T ss_pred HHHHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC-----------------
Confidence 110 134678899999999988 4899999999999999999999999999998776543
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKE 237 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~~ 237 (265)
+++++.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.+
T Consensus 195 ---------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 195 ---------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred ---------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 4557899999999999999999999999999999999999999988754 3479999999999999
Q ss_pred HHHHHh
Q 024578 238 AIPEIW 243 (265)
Q Consensus 238 ~l~~~~ 243 (265)
++.+++
T Consensus 266 ~~~~~~ 271 (273)
T PRK13225 266 AVTQLM 271 (273)
T ss_pred HHHHHh
Confidence 888775
No 21
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.94 E-value=1.8e-25 Score=183.23 Aligned_cols=199 Identities=25% Similarity=0.268 Sum_probs=144.1
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHH--HH---HHHHHHHh--c-ccHH---------HHHHc
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RM---CLELYREH--G-TTMA---------GLKAV 74 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~--~-~~~~---------~~~~~ 74 (265)
+|+|+||+||||+|+...+..++.+ +.+.+|++..... .. ...++..+ + .... .....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999988877766655 4455665432211 10 01111111 1 0000 12223
Q ss_pred CCCCChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
+.....+.+...+.+.. ....+++||+.++|+.++ .+++|+||+....+...++.+++..+||.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~--- 151 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQ--- 151 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCC---
Confidence 33222222333332221 134678999999998884 789999999999999999999999999999999988765
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----CCCCC
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPAD 226 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l-g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~~~a~ 226 (265)
||++.+++.+++++ |++|+++++|||+. +|+.+|+++|++++++.++.. ...++
T Consensus 152 --------------------KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~ 211 (224)
T TIGR02254 152 --------------------KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPT 211 (224)
T ss_pred --------------------CCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCc
Confidence 99999999999999 99999999999998 799999999999999987532 34678
Q ss_pred ceecCHhHHHHHH
Q 024578 227 HALNSIHNIKEAI 239 (265)
Q Consensus 227 ~~v~~~~el~~~l 239 (265)
+++.++.||.++|
T Consensus 212 ~~~~~~~el~~~~ 224 (224)
T TIGR02254 212 YEIRSLEELYEIL 224 (224)
T ss_pred eEECCHHHHHhhC
Confidence 8999999998754
No 22
>PRK09449 dUMP phosphatase; Provisional
Probab=99.94 E-value=1.1e-25 Score=184.60 Aligned_cols=123 Identities=19% Similarity=0.241 Sum_probs=108.8
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
...++||+.++|+.| +.+++|+||+....++..++.+|+..+||.++++++.+..
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~----------------------- 149 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVA----------------------- 149 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCC-----------------------
Confidence 467899999999988 4889999999999999999999999999999999988775
Q ss_pred CCCHHHHHHHHHHcCCC-CCcEEEEcCCh-hcHHHHHHcCceEEEECCC-CC---CCCCCceecCHhHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVD-PKKTIFFDDSA-RNIASAKAAGLHTVIVGSS-VP---VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~-~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~-~~---~~~a~~~v~~~~el~~~l~ 240 (265)
||++++|..+++++|+. +++|++|||+. +|+.+|+++|+.++++.++ .. ...+++++.++.+|.+++.
T Consensus 150 KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 99999999999999985 58999999998 6999999999999999743 22 3458899999999988764
No 23
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=5.9e-26 Score=191.08 Aligned_cols=201 Identities=20% Similarity=0.251 Sum_probs=148.6
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHc-C-----CCCC---
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-G-----YEFD--- 79 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~--- 79 (265)
.++|+|+||+||||+|+...+..++.. +.+.+|.+....... ....+.....+ ... . ...+
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 81 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDEL 81 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHH
Confidence 468999999999999988887777765 667777764332221 11222221111 110 0 0111
Q ss_pred hHHHHHHHhcccc--CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 80 NDEFHAFVHGKLP--YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
.+.+.+.+.+.+. .....++||+.++|+.+ +.+++|+||.+...++..++.+++..+|+.++++++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~----- 156 (272)
T PRK13223 82 AEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQK----- 156 (272)
T ss_pred HHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCC-----
Confidence 1222222222111 13457899999999887 4789999999999999999999999999999998877654
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCce
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHA 228 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~ 228 (265)
||++++++.+++++|++|++|++|||+.+|+.+|+++|+.++++.+|.. ...++++
T Consensus 157 ------------------Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~v 218 (272)
T PRK13223 157 ------------------KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALV 218 (272)
T ss_pred ------------------CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEE
Confidence 9999999999999999999999999999999999999999999988643 3479999
Q ss_pred ecCHhHHHHHHHHH
Q 024578 229 LNSIHNIKEAIPEI 242 (265)
Q Consensus 229 v~~~~el~~~l~~~ 242 (265)
++++.+|.+++...
T Consensus 219 i~~l~el~~~~~~~ 232 (272)
T PRK13223 219 IDDLRALLPGCADP 232 (272)
T ss_pred ECCHHHHHHHHhcc
Confidence 99999998765543
No 24
>PLN02940 riboflavin kinase
Probab=99.94 E-value=2.1e-25 Score=195.74 Aligned_cols=196 Identities=19% Similarity=0.246 Sum_probs=148.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 83 (265)
...+|+|+||+||||+|+...+..++.. +++.+|.+..... .....|.... .+...+.....+++
T Consensus 8 ~~~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 77 (382)
T PLN02940 8 KKLVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEF 77 (382)
T ss_pred cccCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 3458999999999999988777777765 5566776543211 1222232211 22333444444443
Q ss_pred HHHHhccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHh-HhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 84 HAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 84 ~~~~~~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~-~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
...+.+.+ ......++||+.++|+.| +.+++|+||.....+...++ .+++..+|+.++++++....
T Consensus 78 ~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~-------- 149 (382)
T PLN02940 78 NSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKG-------- 149 (382)
T ss_pred HHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCC--------
Confidence 33222211 124578899999999888 48899999999999988887 78999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHh
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIH 233 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~ 233 (265)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.
T Consensus 150 ---------------KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~ 214 (382)
T PLN02940 150 ---------------KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLL 214 (382)
T ss_pred ---------------CCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHh
Confidence 9999999999999999999999999999999999999999999987642 456889999999
Q ss_pred HHHH
Q 024578 234 NIKE 237 (265)
Q Consensus 234 el~~ 237 (265)
++..
T Consensus 215 el~~ 218 (382)
T PLN02940 215 DLQP 218 (382)
T ss_pred HcCH
Confidence 9764
No 25
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.93 E-value=2.9e-25 Score=177.26 Aligned_cols=174 Identities=19% Similarity=0.327 Sum_probs=128.2
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFH 84 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 84 (265)
.++|+|+||+||||+||...+..++.+ +.+.+|.+... .. .....|.... .....+.....+.+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-QA----MVALNGSPTWRIAQAIIELNQADLDPHALA 72 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-HH----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 458999999999999988877777765 45556665322 11 1112222211 112223333333333
Q ss_pred HHHh---ccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 85 AFVH---GKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 85 ~~~~---~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
.... .........++|+ .++|+.++ .+++|+||+....++..++++++..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~---------- 141 (188)
T PRK10725 73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHH---------- 141 (188)
T ss_pred HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCC----------
Confidence 2211 1111245677886 57888774 789999999999999999999999999999999988764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.
T Consensus 142 -------------KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 142 -------------KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -------------CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999999999999999999875
No 26
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.93 E-value=2.2e-24 Score=177.35 Aligned_cols=124 Identities=26% Similarity=0.374 Sum_probs=112.9
Q ss_pred CCCCChhHHHHHhcCCCc--EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSMPQR--KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~~~--~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.++++|++.+.|+.++.+ ++|+||+....+...++.+|+.++||.++++++.+..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~----------------------- 153 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA----------------------- 153 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC-----------------------
Confidence 478999999999999755 9999999999999999999999999999999999875
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCCC-----CCCCceecCHhHHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV-----PPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~~-----~~a~~~v~~~~el~~~l~~ 241 (265)
||.+++|+.+++++|++|++++||||+. ||+.+|+++||+++|+..+... ..+++.+.++.++.+.+..
T Consensus 154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 9999999999999999999999999999 6889999999999999876532 4688899999999988764
No 27
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.93 E-value=8.6e-25 Score=178.50 Aligned_cols=196 Identities=26% Similarity=0.314 Sum_probs=143.9
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcc----cHHHHHH-cCCC--CChHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT----TMAGLKA-VGYE--FDNDEF 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~--~~~~~~ 83 (265)
++|++||||||||+||...+.++|.+ +.+.+|+....... ....|. ....+.. .+.. ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 47899999999999998888888876 67778876544221 111221 1111111 1111 122222
Q ss_pred HHHHhc--cccCCCCCCChhHHHHHhcCC---CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 84 HAFVHG--KLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 84 ~~~~~~--~~~~~~~~~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
.....+ ....+...+.||+.++|+.|+ .+++++|+.....++..++.+|+.++|+.++++++....
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~--------- 141 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG--------- 141 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC---------
Confidence 222221 122356889999999999995 889999999999999999999999999999999988774
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--------CCCCCceec
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALN 230 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~ 230 (265)
||+|++|..+++++|++|++|+.|+|+.+.+.+++++||.++++.++.. ...++....
T Consensus 142 --------------KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T COG0637 142 --------------KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLL 207 (221)
T ss_pred --------------CCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhc
Confidence 9999999999999999999999999999999999999999999987433 223444555
Q ss_pred CHhHHHHHH
Q 024578 231 SIHNIKEAI 239 (265)
Q Consensus 231 ~~~el~~~l 239 (265)
++.++...+
T Consensus 208 ~~~~l~~~~ 216 (221)
T COG0637 208 DLAELPALL 216 (221)
T ss_pred cHHHHHHHH
Confidence 555554433
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.93 E-value=4.3e-24 Score=176.64 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=136.2
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCCh---hhHHHHHHHHHHH--------h---ccc-HHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE---SEVPRMCLELYRE--------H---GTT-MAGLKA 73 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~---~~~-~~~~~~ 73 (265)
+.++|+|+||+||||+|+.+.+..++.+.+...-........ .........+... . +.. ...+..
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD 86 (238)
T ss_pred CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence 446899999999999998887777776644332111111111 1111111100000 0 000 112233
Q ss_pred cCCCCChH-----HHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCC
Q 024578 74 VGYEFDND-----EFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI 146 (265)
Q Consensus 74 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~ 146 (265)
.|...... .....+.. ....+.++||+.++|+.|+ .+++|+||++.. ++.+|+..+|+.++++++.
T Consensus 87 ~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~ 159 (238)
T PRK10748 87 AGLSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH 159 (238)
T ss_pred cCCCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccC
Confidence 44432211 11111211 1134688999999999984 789999998765 4778999999999999888
Q ss_pred CCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----
Q 024578 147 NPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP---- 221 (265)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~---- 221 (265)
+.. ||++++|..+++++|++|++|++|||+. .|+.+|+++|+.++++..+..
T Consensus 160 ~~~-----------------------KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~ 216 (238)
T PRK10748 160 GRS-----------------------KPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQ 216 (238)
T ss_pred CcC-----------------------CCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccc
Confidence 764 9999999999999999999999999995 999999999999999976432
Q ss_pred ----CCCCCceecCHhHHHHHH
Q 024578 222 ----VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 222 ----~~~a~~~v~~~~el~~~l 239 (265)
...++..+.++.||.++|
T Consensus 217 ~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 217 TWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred cccccCCCCEEECCHHHHHhhC
Confidence 135888999999998764
No 29
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.92 E-value=2.6e-24 Score=193.89 Aligned_cols=203 Identities=14% Similarity=0.216 Sum_probs=144.4
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHh-CCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCC---hHH-
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD---NDE- 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~- 82 (265)
.+|+++|+||+||||+|+...+..++.+.+.++.... .+... ... .+....|...... ....-... .+.
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~-~~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~ 312 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT-PID----KYREIMGVPLPKVWEALLPDHSLEIREQT 312 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC-CHH----HHHHHcCCChHHHHHHHhhhcchhHHHHH
Confidence 4568999999999999999999998888665532111 11111 111 1122233322211 11110000 112
Q ss_pred ---HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 83 ---FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
+.+.+.+.+.....+++||+.++|+.+ +++++|+||+....+...++.+++..+|+.++++++...
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~-------- 384 (459)
T PRK06698 313 DAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS-------- 384 (459)
T ss_pred HHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC--------
Confidence 222222222123568899999999887 489999999999999999999999999999999987642
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCH
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSI 232 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~ 232 (265)
||||+.+..++++++ |++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++
T Consensus 385 ----------------~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l 446 (459)
T PRK06698 385 ----------------LNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDL 446 (459)
T ss_pred ----------------CCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCH
Confidence 677889999998874 68999999999999999999999999987643 34689999999
Q ss_pred hHHHHHHHHH
Q 024578 233 HNIKEAIPEI 242 (265)
Q Consensus 233 ~el~~~l~~~ 242 (265)
.++.+++..+
T Consensus 447 ~el~~~l~~~ 456 (459)
T PRK06698 447 LELKGILSTV 456 (459)
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 30
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.92 E-value=4.7e-24 Score=171.68 Aligned_cols=104 Identities=21% Similarity=0.375 Sum_probs=96.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..+.++||+.++|+.+ +++++|+||++...+...++++|+..+|+.++++++++..
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~--------------------- 147 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAY--------------------- 147 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCC---------------------
Confidence 4567899999999888 4889999999999999999999999999999999988875
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
||++++|+.+++++|++|+++++|||+.+|+.+|+++|+.++++.++.
T Consensus 148 --KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 148 --KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred --CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999999999998754
No 31
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.91 E-value=6e-24 Score=169.14 Aligned_cols=170 Identities=22% Similarity=0.334 Sum_probs=122.5
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHH-
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA- 85 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 85 (265)
+|+|+||+||||+|+...+..++.+ +.+.+|.+... ... ....|.... .+...+...+.+.+..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--QYN---TSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--HHH---HHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5799999999999988766666665 45566665321 111 111222211 1122222233332221
Q ss_pred ------HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 86 ------FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 86 ------~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.+.+........++||+.++|+.+ +.+++++|++ ..++..++.+++..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~------- 141 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEG------- 141 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCC-------
Confidence 221111123478999999999887 5889999998 6678899999999999999999877664
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
||++++++.++++++++|+++++|||+.+|+.+|+++|+.++++
T Consensus 142 ----------------kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 142 ----------------KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ----------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999999999999999998875
No 32
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=1.6e-23 Score=177.35 Aligned_cols=196 Identities=19% Similarity=0.284 Sum_probs=133.0
Q ss_pred CccEEEEecCCCccCCc-ccHHHHHHHHHHHHHHHhCCCCh-h-hHHHHHHHHHHHhcccHHH----HHHcCCC------
Q 024578 11 NYECLLFDLDDTLYPLS-TGFNLACRRNIEEFMSQHLHIDE-S-EVPRMCLELYREHGTTMAG----LKAVGYE------ 77 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~-~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~~~------ 77 (265)
.+++|+||+||||+|+. ..+..++.+ +++.+|++. . .... ...+.. .+..... +...+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 111 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVEL-YDELLN-IGGGKERMTWYFNENGWPTSTIEK 111 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHH-HHHHHc-cCCChHHHHHHHHHcCCCcccccc
Confidence 47999999999999988 666777776 556667732 1 1111 111111 2211111 1111111
Q ss_pred --CCh---H----HHH----HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc---cc
Q 024578 78 --FDN---D----EFH----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC---FE 138 (265)
Q Consensus 78 --~~~---~----~~~----~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~---fd 138 (265)
... + .+. ..+.+......+.++||+.++|+.+ +++++|+||.....+...++.++...+ |+
T Consensus 112 ~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 112 APKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE
Confidence 011 1 111 1121111112358899999999877 589999999999999988887743333 34
Q ss_pred eeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 139 GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
.+ ++++.+.. ||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus 192 ~v-~~~~~~~~-----------------------KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 247 (286)
T PLN02779 192 VF-AGDDVPKK-----------------------KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKS 247 (286)
T ss_pred EE-eccccCCC-----------------------CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEcc
Confidence 44 66666553 9999999999999999999999999999999999999999999987
Q ss_pred CCC----CCCCCceecCHhHHHH
Q 024578 219 SVP----VPPADHALNSIHNIKE 237 (265)
Q Consensus 219 ~~~----~~~a~~~v~~~~el~~ 237 (265)
+.. ...++++++++.++..
T Consensus 248 g~~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 248 SYTADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred CCccccccCCCcEEECChhhcch
Confidence 643 2468999999998764
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.91 E-value=9.9e-24 Score=167.85 Aligned_cols=169 Identities=26% Similarity=0.314 Sum_probs=121.7
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHHHHcCCCCChHHHHH---
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGLKAVGYEFDNDEFHA--- 85 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--- 85 (265)
+|+||+||||+|+...+..++.+ +.+.+|++.... . ... ..+... ..+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~-~-~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEE-F-NES---LKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHH-H-HHH---hcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 58999999999988877777765 556667653321 1 111 112111 11223344333332221
Q ss_pred ----HHhcccc-CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 86 ----FVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 86 ----~~~~~~~-~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
.+.+.+. .....++||+.++|+.+ +++++|+||+.. ....++.+++..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~-------- 140 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKG-------- 140 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCC--------
Confidence 1221111 12357899999999888 488999998643 46789999999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
||+|+.|+.++++++++|++|++|||+.+|+.+|+++|+.+++++
T Consensus 141 ---------------kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 141 ---------------KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ---------------CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999999999999999999999999874
No 34
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.91 E-value=6.3e-23 Score=165.76 Aligned_cols=173 Identities=19% Similarity=0.271 Sum_probs=121.9
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHH--HHHHHHHHH-------h----cccH---------HH
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RMCLELYRE-------H----GTTM---------AG 70 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~----~~~~---------~~ 70 (265)
|+|+||+||||+|+...+..++.+ +.+.+|++..... ......+.. + |... ..
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999988888888876 5566777543211 111111110 1 2221 11
Q ss_pred HHHcCCCCChHHHH---HHHhccc-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeec
Q 024578 71 LKAVGYEFDNDEFH---AFVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 143 (265)
Q Consensus 71 ~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~ 143 (265)
+...+. .....+. ..+.+.+ ......++||+.++|+.+ +.+++|+||+... ....++.+++..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 122221 1111222 2111111 113457899999999887 4789999998765 47789999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEE
Q 024578 144 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI 215 (265)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~ 215 (265)
++.+.. ||+++++..+++++|++|+++++|||+. +|+.+|+++|+.+++
T Consensus 154 ~~~~~~-----------------------KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 154 YEVGAE-----------------------KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cccCCC-----------------------CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 988774 9999999999999999999999999998 899999999999875
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.90 E-value=1.3e-23 Score=165.05 Aligned_cols=168 Identities=29% Similarity=0.462 Sum_probs=122.4
Q ss_pred EEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHHHHhc
Q 024578 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHAFVHG 89 (265)
Q Consensus 15 iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 89 (265)
|+||+||||+++...+...+.+ .+.+.++.+.. ... +....+.... .+...+.. ...+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-AEE----LRELFGKSYEEALERLLERFGID--PEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-HHH----HHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-HHH----HHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhh
Confidence 7999999999966644444443 34555555421 111 1111111111 11111111 2233333333
Q ss_pred cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 90 KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 90 ~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
.......+++||+.++|+.+ +.+++++||++...+...++.+|+..+|+.++++++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------- 132 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------- 132 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS-----------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh-----------------
Confidence 22225678999999999888 4999999999999999999999999999999999988875
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
||+++.|+.+++++|++|+++++|||+..|+.+|+++|+.++++
T Consensus 133 ------Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 133 ------KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp ------TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ------hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999999999999999999999986
No 36
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.89 E-value=9.6e-23 Score=163.93 Aligned_cols=183 Identities=15% Similarity=0.169 Sum_probs=122.7
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChH---HHHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDND---EFHAFV 87 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 87 (265)
|+|+|+||+||||+|+...+ . .+.+.+|++.... ............. ...+ .+.. ++.+.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~~~---~~~~g~~~~~~~~--~~~~--~~~~~~~~~~~~~ 64 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTDHI---LKMIQDERFRDPG--ELFG--CDQELAKKLIEKY 64 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHHHH---HHHHhHhhhcCHH--HHhc--ccHHHHHHHhhhh
Confidence 47999999999999954332 2 2456677754221 1111111111111 1111 1111 122222
Q ss_pred hccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCcc----ccceeeecCCCCCCCCCCCCCCCccc
Q 024578 88 HGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED----CFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~----~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
.+........++||+.++|+.|+ .+++++||.........++.+++.. +|+.+++++.
T Consensus 65 ~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~---------------- 128 (197)
T PHA02597 65 NNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH---------------- 128 (197)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc----------------
Confidence 21112245678999999999984 5678889887776666777776654 4566666654
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc--CceEEEECCCCC--CCCCCceecCHhHHHH
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVP--VPPADHALNSIHNIKE 237 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a--G~~~i~~~~~~~--~~~a~~~v~~~~el~~ 237 (265)
.|||++.+..+++++| |++++||||+.+|+.+|+++ |+.++++.++.. .+.+++++.++.|+..
T Consensus 129 ----------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 129 ----------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred ----------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 2778999999999999 89999999999999999999 999999988864 3467789999998864
No 37
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.89 E-value=7.8e-22 Score=160.32 Aligned_cols=102 Identities=22% Similarity=0.268 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhH--HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKH--AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~--~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++||+.++|+.| +++++|+||+.... ....+...++..+||.++++++.+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~-------------------- 151 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR-------------------- 151 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC--------------------
Confidence 467899999999887 48899999986543 33344456777899999999887764
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||+|.+|..+++++|++|++|++|||+..|+.+|+++|+.++++.++
T Consensus 152 ---KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 152 ---KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred ---CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999999999998764
No 38
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.88 E-value=7e-22 Score=192.23 Aligned_cols=195 Identities=19% Similarity=0.247 Sum_probs=145.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-----HHcCC-CCChHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGY-EFDNDE 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~ 82 (265)
.+.+|+|+|||||||+|+...+..++.+ +.+++|++..... +....+.....+ ...+. ....+.
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~ 141 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDA 141 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHH
Confidence 4568999999999999988777777765 5566777543211 122223322211 11122 122222
Q ss_pred ----HHHHHhcccc-CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc-cccceeeecCCCCCCCCCC
Q 024578 83 ----FHAFVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPA 153 (265)
Q Consensus 83 ----~~~~~~~~~~-~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~-~~fd~i~~~~~~~~~~~~~ 153 (265)
+.+.+.+.+. .....++||+.++|+.| +++++|+||.....++..++++++. .+|+.++++++....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~---- 217 (1057)
T PLN02919 142 AKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENL---- 217 (1057)
T ss_pred HHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccC----
Confidence 2222222211 11234799999999888 4899999999999999999999996 789999999988764
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCce
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHA 228 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~ 228 (265)
||+|++|..+++++|++|++|++|||+..|+.+|+++||+++++.++.. ..+++++
T Consensus 218 -------------------KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~v 278 (1057)
T PLN02919 218 -------------------KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLI 278 (1057)
T ss_pred -------------------CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEE
Confidence 9999999999999999999999999999999999999999999988754 4678999
Q ss_pred ecCHhHHH
Q 024578 229 LNSIHNIK 236 (265)
Q Consensus 229 v~~~~el~ 236 (265)
+.++.++.
T Consensus 279 i~~l~el~ 286 (1057)
T PLN02919 279 RKDIGNIS 286 (1057)
T ss_pred ECChHHCC
Confidence 99999974
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.88 E-value=9.4e-22 Score=160.74 Aligned_cols=198 Identities=16% Similarity=0.209 Sum_probs=123.7
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 83 (265)
++++|+++||+||||+++. .+.+ +.+.+|.+.... ......... ..... .+..+ .....+.+
T Consensus 11 ~~~~k~iiFD~DGTL~~~~-----~~~~-----l~~~~g~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~-~~~~~~~~ 77 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE-----TIDE-----IAKIAGVEEEVS-EITERAMRG-ELDFKASLRERVALL-KGLPVELL 77 (219)
T ss_pred hccCCEEEEeCcccCCCch-----HHHH-----HHHHhCCHHHHH-HHHHHHHcC-CCCHHHHHHHHHHHh-CCCCHHHH
Confidence 5678999999999999953 1221 344555532211 111111110 00111 11111 12223333
Q ss_pred HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 84 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
.... ....++||+.++++.+ +.+++|+||+....+..+++.+++..+|+..+..++.. +.+
T Consensus 78 ~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~--------~~~-- 141 (219)
T TIGR00338 78 KEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK--------LTG-- 141 (219)
T ss_pred HHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE--------EEE--
Confidence 3333 3467899999998887 58899999999999999999999888776543322100 000
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceec--CHhHHHHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKEA 238 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~--~~~el~~~ 238 (265)
........++||+..++.++++++++|++|++|||+.+|+.+|+.+|+.+++.+...-...|++++. ++.+++.+
T Consensus 142 ---~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 142 ---LVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ---EecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 0000011247899999999999999999999999999999999999998654332222457888877 44555543
No 40
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.88 E-value=3.2e-21 Score=155.33 Aligned_cols=121 Identities=17% Similarity=0.314 Sum_probs=98.5
Q ss_pred HcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCC
Q 024578 73 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINP 148 (265)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~ 148 (265)
..+...+.+.+...+.+.+ ..++||+.++|+.+ +.+++|+||++.......+.. .++..+|+.++++++++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~ 139 (199)
T PRK09456 64 EMALSLSYEQFAHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM 139 (199)
T ss_pred HhCCCCCHHHHHHHHHHHH----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC
Confidence 3444444455554443321 35789999999888 489999999988877665554 367788999999999887
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
. ||+|++|+.+++++|++|++|++|||+..|+.+|+++|+.++++.++.
T Consensus 140 ~-----------------------KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 140 R-----------------------KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred C-----------------------CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 5 999999999999999999999999999999999999999999998753
No 41
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.88 E-value=1.4e-22 Score=160.77 Aligned_cols=97 Identities=34% Similarity=0.556 Sum_probs=88.2
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.+++||+.++|+.+ +.+++|+||+.... ...+.++|+..+|+.++++++.+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~----------------------- 139 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRG----------------------- 139 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCC-----------------------
Confidence 68899999999887 57899999999888 6666669999999999999887764
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
||+++.|+.+++++|++|++|++|||+..|+.+|+++|+.++++
T Consensus 140 KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 140 KPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999999999999875
No 42
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.87 E-value=1.2e-21 Score=154.65 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=111.7
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCCh--hhHHHHHHHHHH-Hhc-----------ccHHHHHHcCCCCC
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE--SEVPRMCLELYR-EHG-----------TTMAGLKAVGYEFD 79 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~ 79 (265)
+|+||+||||+|+...+..++.. +....+... .........+.. ..+ .........+....
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 75 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAA-----IAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE 75 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHH-----hhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC
Confidence 58999999999988777666654 222222110 000000111111 111 01112234455444
Q ss_pred hHHHHHHHhccccCCCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
.+... .+.+. +..+.++||+.++|+ +++|+||++...+...++++++..+|+.++++++.+..
T Consensus 76 ~~~~~-~~~~~--~~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~---------- 138 (175)
T TIGR01493 76 PKYGE-RLRDA--YKNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAY---------- 138 (175)
T ss_pred HHHHH-HHHHH--HhcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCC----------
Confidence 43222 22111 145679999999999 47899999999999999999999999999999987764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 139 -------------KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 139 -------------KPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred -------------CCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999999999999864
No 43
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.86 E-value=1e-20 Score=152.14 Aligned_cols=88 Identities=25% Similarity=0.326 Sum_probs=77.7
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 174 (265)
+.++..++|+.+ +++++|+||++...++..++.+|+..+|+.++++++... ||
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------KP 162 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP------------------------KP 162 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC------------------------Cc
Confidence 344446666655 689999999999999999999999999999999887653 99
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 175 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
+|+.+..+++++|++|++|++|||+.+|+.+|+++
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999999999864
No 44
>PLN02954 phosphoserine phosphatase
Probab=99.85 E-value=1e-19 Score=149.15 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=124.2
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHH-cC-CCCChHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKA-VG-YEFDNDEFHA 85 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~ 85 (265)
.+++|+|+|||||||+++.. +. .+.+.+|.+...... ...+.. ...... .+.. ++ .....+.+..
T Consensus 9 ~~~~k~viFDfDGTL~~~~~-----~~-----~~~~~~g~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVDEG-----ID-----ELAEFCGAGEAVAEW-TAKAMG-GSVPFEEALAARLSLFKPSLSQVEE 76 (224)
T ss_pred HccCCEEEEeCCCcccchHH-----HH-----HHHHHcCChHHHHHH-HHHHHC-CCCCHHHHHHHHHHHcCCCHHHHHH
Confidence 35689999999999999522 21 256667664222111 111111 001111 1111 11 1122334444
Q ss_pred HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc--cccceeeecCCCCCCCCCCCCCCCcc
Q 024578 86 FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~--~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
.+.+ ....++||+.++++.+ +.+++|+|++....++..++.+|+. .+|+..+..+.-+. .
T Consensus 77 ~~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~-----------~ 141 (224)
T PLN02954 77 FLEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE-----------Y 141 (224)
T ss_pred HHHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc-----------E
Confidence 4432 1346889999998877 5889999999999999999999986 34543222111000 0
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCHhHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNI 235 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~~el 235 (265)
.+.......+.+++|++.++.++++++. +++++|||+.+|+.+++++|+.++...++.. ...++++++++.+|
T Consensus 142 ~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 142 AGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred ECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 0000111112357889999999999885 6899999999999999998887665433221 34589999999999
Q ss_pred HHHH
Q 024578 236 KEAI 239 (265)
Q Consensus 236 ~~~l 239 (265)
.+++
T Consensus 220 ~~~~ 223 (224)
T PLN02954 220 IEVL 223 (224)
T ss_pred HHhh
Confidence 8754
No 45
>PLN02811 hydrolase
Probab=99.84 E-value=2.1e-20 Score=152.87 Aligned_cols=184 Identities=18% Similarity=0.198 Sum_probs=129.3
Q ss_pred cCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH----H-HHHcCCC--CChHHHHHHH---h
Q 024578 19 LDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA----G-LKAVGYE--FDNDEFHAFV---H 88 (265)
Q Consensus 19 lDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~--~~~~~~~~~~---~ 88 (265)
+||||+||...+..++.+ +.+.+|++... . ......|.... . ....+.. ...+.+.... .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-S----LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999988877777775 55667765321 1 11222343321 1 1222332 1222222211 1
Q ss_pred ccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHH-HHhHhCCccccceeeecC--CCCCCCCCCCCCCCcccC
Q 024578 89 GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFE--TINPRLQPADNTDGIENN 162 (265)
Q Consensus 89 ~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~-~l~~~~~~~~fd~i~~~~--~~~~~~~~~~~~~~~~~~ 162 (265)
... .....++||+.++|+.| +++++|+||........ .++..++..+|+.+++++ +.+.
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~-------------- 135 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ-------------- 135 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------
Confidence 111 23567899999999887 58999999998765443 444456778999999998 6665
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC---CCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 235 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg---~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el 235 (265)
+||+|++|..++++++ ++|++|++|||+..|+.+|+++|+.++++.++.. ...+++++.++.++
T Consensus 136 ---------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 136 ---------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred ---------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 4999999999999997 9999999999999999999999999999987642 33678888888875
Q ss_pred H
Q 024578 236 K 236 (265)
Q Consensus 236 ~ 236 (265)
.
T Consensus 207 ~ 207 (220)
T PLN02811 207 K 207 (220)
T ss_pred C
Confidence 4
No 46
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.84 E-value=5.9e-20 Score=141.87 Aligned_cols=151 Identities=21% Similarity=0.231 Sum_probs=108.9
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhccccC
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY 93 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (265)
+|+||+||||+|+...+..++.+. .+.++..... +....|.....+.... ...+++.. + .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~-----~-~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEET-----LEEFGEDFQA-------LKALRGLAEELLYRIA--TSFEELLG-----Y-D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHH-----HHHhcccHHH-------HHHHHccChHHHHHHH--HHHHHHhC-----c-c
Confidence 489999999999877777777763 3444432211 1111222211111110 01111111 1 1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.....+||+.++|+.+ +.+++|+||+....+...++.+ +..+|+.++++++.+ .
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~--------------------- 117 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A--------------------- 117 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C---------------------
Confidence 3445678999999887 4889999999999999999987 778899999988766 4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 210 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG 210 (265)
||+++.+..+++++|++| +|++|||+..|+.+|+++|
T Consensus 118 --Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 118 --KPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --CcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 999999999999999999 9999999999999999987
No 47
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.84 E-value=4e-20 Score=146.71 Aligned_cols=120 Identities=22% Similarity=0.245 Sum_probs=96.5
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeeecCC-----CCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFET-----INPRLQP 152 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~~~~-----~~~~~~~ 152 (265)
+.++||+.++|+.| +++++|+||... ..+...++.+++ .|+.++.+.. .+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~---- 101 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDC---- 101 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcC----
Confidence 46889999999888 589999999863 234445666666 3777775432 233
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCC--
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPA-- 225 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a-- 225 (265)
+||+++++..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...+
T Consensus 102 -------------------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~ 162 (181)
T PRK08942 102 -------------------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPG 162 (181)
T ss_pred -------------------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCC
Confidence 49999999999999999999999999999999999999999999987643 2345
Q ss_pred CceecCHhHHHHHHH
Q 024578 226 DHALNSIHNIKEAIP 240 (265)
Q Consensus 226 ~~~v~~~~el~~~l~ 240 (265)
++++.++.++.+++.
T Consensus 163 ~~ii~~l~el~~~l~ 177 (181)
T PRK08942 163 TWVLDSLADLPQALK 177 (181)
T ss_pred ceeecCHHHHHHHHH
Confidence 899999999988764
No 48
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.83 E-value=7.8e-20 Score=147.49 Aligned_cols=185 Identities=16% Similarity=0.267 Sum_probs=126.6
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhh--HHHHHHHHHHH-------hcc-----cHHH---
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESE--VPRMCLELYRE-------HGT-----TMAG--- 70 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~-----~~~~--- 70 (265)
..+.+|+|+||++|||+...+.....+.+ +.+.+|++... ........+.. ++. ....
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~ 77 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWP 77 (237)
T ss_pred cccceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHH
Confidence 45679999999999999866666665554 67788887332 11111111110 010 0000
Q ss_pred --H-HHc---CCCCChHHHHHHHhccccC---CCCCCChhHHHHHhcCC---CcEEEEeCCChhHHHHHHhHhCCccccc
Q 024578 71 --L-KAV---GYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE 138 (265)
Q Consensus 71 --~-~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~~l~~~~~~~~fd 138 (265)
+ ..+ +.+........+..+.+.. ......+++.++++.++ ..++++||.+...- ..+..+++..+||
T Consensus 78 ~lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD 156 (237)
T KOG3085|consen 78 KLVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFD 156 (237)
T ss_pred HHHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhh
Confidence 0 011 1111111111111111111 24566778889988884 56778888876654 8888999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEEC
Q 024578 139 GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVG 217 (265)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~ 217 (265)
.++.|.+.+.. ||+|.+|+.+++++++.|++|++|||+. ||+++|+++||+++.+.
T Consensus 157 ~vv~S~e~g~~-----------------------KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 157 FVVESCEVGLE-----------------------KPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred hhhhhhhhccC-----------------------CCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 99999999986 9999999999999999999999999999 89999999999999998
Q ss_pred CCCC
Q 024578 218 SSVP 221 (265)
Q Consensus 218 ~~~~ 221 (265)
++..
T Consensus 214 ~~~~ 217 (237)
T KOG3085|consen 214 NSIT 217 (237)
T ss_pred cccc
Confidence 7654
No 49
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.82 E-value=1.5e-19 Score=145.52 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=88.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc--
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ-- 168 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 168 (265)
....++||+.++|+.+ +.+++|+|++....++.+++.+|+..+|+..+..++.+.. .+..
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~---------------~p~~~~ 141 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI---------------QPDGIV 141 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE---------------ecceee
Confidence 3467899999999887 5899999999999999999999988878776665543321 0000
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
....++|++.++.+++++|++++++++|||+.+|+.+++.+|+.++..+.+.
T Consensus 142 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 142 RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred EEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 0012456688999999999999999999999999999999999877766543
No 50
>PRK06769 hypothetical protein; Validated
Probab=99.82 E-value=1.5e-19 Score=142.18 Aligned_cols=121 Identities=16% Similarity=0.138 Sum_probs=94.4
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChh--------HHHHHHhHhCCccccceee-ecCCCCCCCCCCCCCCCcccCc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQK--------HAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~--------~~~~~l~~~~~~~~fd~i~-~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
+.++||+.++|+.| +++++|+||.... .....++.+|+..+|.... ++++...
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------- 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------- 91 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence 45789999999888 5899999998642 2333466666554433222 2333344
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------------CCCCCceecC
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------VPPADHALNS 231 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------------~~~a~~~v~~ 231 (265)
.||+++++.+++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.+
T Consensus 92 --------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~ 163 (173)
T PRK06769 92 --------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAEN 163 (173)
T ss_pred --------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhC
Confidence 49999999999999999999999999999999999999999999987642 2458899999
Q ss_pred HhHHHHHH
Q 024578 232 IHNIKEAI 239 (265)
Q Consensus 232 ~~el~~~l 239 (265)
+.|+.+.|
T Consensus 164 ~~el~~~l 171 (173)
T PRK06769 164 FEDAVNWI 171 (173)
T ss_pred HHHHHHHH
Confidence 99998865
No 51
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.81 E-value=5.9e-19 Score=150.98 Aligned_cols=130 Identities=15% Similarity=0.117 Sum_probs=93.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++||+.++++.+ +.+++|+|++.....+.+++++++...+...+...+- .+ .+... ...+
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------~l----tg~v~-g~iv 244 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------KL----TGNVL-GDIV 244 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC--------EE----EeEec-CccC
Confidence 3467899999988777 5899999999999899999998876544321111000 00 00000 0112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKE 237 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~ 237 (265)
.+|||++.++.+++++|+++++|++|||+.||+.|++.+|+.+++.+.+.-+..|+++++ ..+|..
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~~ 310 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLMG 310 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHHH
Confidence 358999999999999999999999999999999999999998887333333678888886 334433
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.81 E-value=2.6e-19 Score=141.40 Aligned_cols=128 Identities=17% Similarity=0.155 Sum_probs=95.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.+.++||+.++|+.| +++++|+||.+. ......++.+++. |+.++.+.....
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~-------- 93 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPE-------- 93 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCc--------
Confidence 356889999998888 589999999884 2334556666655 777665432211
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCC-----CCCCCceec
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALN 230 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~-----~~~a~~~v~ 230 (265)
.....+.....+||++++|..+++++|++|++|+||||+.+|+.+|+++|+.+ +++.++.. ...++++++
T Consensus 94 ----~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 94 ----GVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred ----ccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 00001111223599999999999999999999999999999999999999998 78887753 246899999
Q ss_pred CHhHHH
Q 024578 231 SIHNIK 236 (265)
Q Consensus 231 ~~~el~ 236 (265)
++.+|.
T Consensus 170 ~~~el~ 175 (176)
T TIGR00213 170 SLADLP 175 (176)
T ss_pred cHHHhh
Confidence 999885
No 53
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.80 E-value=7.3e-19 Score=142.15 Aligned_cols=195 Identities=13% Similarity=0.089 Sum_probs=122.8
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHH-HHHHHHHhcccHHHHHHcCCCCChHHHHHHHhcc
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRM-CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 90 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (265)
+|+|+||+||||++ . .+. .+.+.+|.+....... ...+....+.....+... ..+.+.+....
T Consensus 1 ~~~v~FD~DGTL~~--~----~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP--E----IWI-----AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEH--GLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChh--h----HHH-----HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHc--CCCHHHHHHHH---
Confidence 47999999999983 1 222 1456666643210000 000111122222222222 23455555544
Q ss_pred ccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 91 LPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 91 ~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
...+++||+.++++.++ .+++|+|++....++..++++++..+|+..+..++-+.. ..
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i---------------~~-- 124 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI---------------TG-- 124 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE---------------EC--
Confidence 45678999999998884 789999999999999999999998888765544321100 00
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCc-eecCHhHHHHHHHHHhcC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~-~v~~~~el~~~l~~~~~~ 245 (265)
..++++.....++++++..++++++||||.+|+.+++++|+... +..++. ...+++ +++++.+|.+++.+..++
T Consensus 125 --~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 125 --YDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIAEFPQFPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred --ccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence 00222333455566666677999999999999999999998654 443322 224454 899999999998887643
No 54
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.78 E-value=7.3e-19 Score=134.71 Aligned_cols=101 Identities=22% Similarity=0.278 Sum_probs=79.1
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccc--cceee-ecCCCCCCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDC--FEGII-CFETINPRLQPAD 154 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~--fd~i~-~~~~~~~~~~~~~ 154 (265)
++++||+.++|+.| +++++|+||.+. ..+...++++++... |..+. +++..+.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------ 99 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC------
Confidence 35788888888877 589999999873 456667788887521 11111 1233333
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
.||++++++.++++++++|++|++|||+..|+++|+++|+.+++++.|
T Consensus 100 -----------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 -----------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred -----------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 399999999999999999999999999999999999999999999764
No 55
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.78 E-value=1.7e-18 Score=141.43 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=91.2
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeec------CCCCCCCCCCCCCCCcccCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF------ETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~------~~~~~~~~~~~~~~~~~~~~~ 164 (265)
.+..++||+.++++.+ +.+++|+|++....++.+++.+ +.. +.++++ +.+..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~---------------- 131 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITI---------------- 131 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEE----------------
Confidence 4467899999999877 5899999999999999999998 643 334332 22111
Q ss_pred CcCcccCCCCCHHH----------HHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC--C--CCCCCCCceec
Q 024578 165 SSNQRILCKPSLEA----------IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS--S--VPVPPADHALN 230 (265)
Q Consensus 165 ~~~~~~~~kp~~~~----------~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~--~--~~~~~a~~~v~ 230 (265)
.||.+.. ...++++++.++++|++||||.+|+.+|+++|+.++ -.. . .....+.+.+.
T Consensus 132 -------~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~ 203 (219)
T PRK09552 132 -------TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFE 203 (219)
T ss_pred -------eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccC
Confidence 2443322 236788899999999999999999999999999433 110 0 12445777899
Q ss_pred CHhHHHHHHHHHhc
Q 024578 231 SIHNIKEAIPEIWE 244 (265)
Q Consensus 231 ~~~el~~~l~~~~~ 244 (265)
++.|+.+.|+++++
T Consensus 204 ~f~ei~~~l~~~~~ 217 (219)
T PRK09552 204 TFHDVQTELKHLLE 217 (219)
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999988764
No 56
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.77 E-value=1.1e-17 Score=134.65 Aligned_cols=194 Identities=19% Similarity=0.190 Sum_probs=143.8
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HH----HHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GL----KAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~ 83 (265)
...+.+++||+||||+|+...+...+.. ++.++|........ ....|.... .. .......+.+++
T Consensus 7 ~~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~-----~~~mG~~~~eaa~~~~~~~~dp~s~ee~ 76 (222)
T KOG2914|consen 7 SLKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVK-----VKSMGKRTSEAARLFVKKLPDPVSREEF 76 (222)
T ss_pred ccceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHH-----HHHcCCCHHHHHHHHHhhcCCCCCHHHH
Confidence 4457899999999999988777777765 77778774433221 122233221 11 233456677777
Q ss_pred HHHHhccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhC-Cccccceeee--cCCCCCCCCCCCC
Q 024578 84 HAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLG-LEDCFEGIIC--FETINPRLQPADN 155 (265)
Q Consensus 84 ~~~~~~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~-~~~~fd~i~~--~~~~~~~~~~~~~ 155 (265)
.....+.. ......+.||+.++++.| ++++.++|+.+.......+++++ +-..|+.++. ++++..
T Consensus 77 ~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~------- 149 (222)
T KOG2914|consen 77 NKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN------- 149 (222)
T ss_pred HHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC-------
Confidence 65554422 235678899999999888 48999999999998888888887 5566888777 344544
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceec
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALN 230 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~ 230 (265)
+||+|++|..+++.+|.+| +.|++++|++..+++|+++||.+++++...- ...++.++.
T Consensus 150 ----------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~ 213 (222)
T KOG2914|consen 150 ----------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILE 213 (222)
T ss_pred ----------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecc
Confidence 5999999999999999998 9999999999999999999999999987332 455666666
Q ss_pred CHhHH
Q 024578 231 SIHNI 235 (265)
Q Consensus 231 ~~~el 235 (265)
++.+.
T Consensus 214 ~~~~~ 218 (222)
T KOG2914|consen 214 SLEDF 218 (222)
T ss_pred ccccc
Confidence 65543
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.76 E-value=5.2e-17 Score=131.82 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=87.9
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...+++||+.++|+.+ |++++|+||++...++..+++. ++..+|+.++.. ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g-------------------- 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG-------------------- 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence 3567899999999988 5889999999999888888875 566677776632 222
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
.||+++.|..+++++|++|++++||||+..|+.+|+++|+.++++.++.+
T Consensus 151 ----~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 151 ----LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ----cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 39999999999999999999999999999999999999999999977653
No 58
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.76 E-value=3.5e-18 Score=132.38 Aligned_cols=101 Identities=16% Similarity=0.323 Sum_probs=86.4
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeeec-----CCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ 151 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~~-----~~~~~~~~ 151 (265)
.++++||+.++|+.| +++++|+||.+ ...+...++.+|+. |+.++.+ ++...
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~--- 101 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC--- 101 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC---
Confidence 357889999999888 48999999963 45677889999986 8766543 44444
Q ss_pred CCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 152 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.||++.++..++++++++|++++||||+.+|+.+|+++|+.++++.+++
T Consensus 102 --------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 102 --------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred --------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 3999999999999999999999999999999999999999999998875
No 59
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.75 E-value=2.6e-17 Score=132.39 Aligned_cols=192 Identities=11% Similarity=0.063 Sum_probs=117.3
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhcccc
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP 92 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (265)
++++||+||||++. .|. .+....|+............+..+......+... ...+.+.+.+.+
T Consensus 2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~----- 64 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVI----- 64 (203)
T ss_pred eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHH-----
Confidence 57999999999973 122 2455666533221111111122222211222221 144455665555
Q ss_pred CCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 93 YEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 93 ~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++||+.++++.++ .+++|+|++....+..+++.+|+..+|......++.+.. .+...
T Consensus 65 -~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~-----------tG~~~----- 127 (203)
T TIGR02137 65 -ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-----------VGYQL----- 127 (203)
T ss_pred -HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee-----------ECeee-----
Confidence 34678999999998773 689999999999999999999988777642222110000 00000
Q ss_pred CCCC-CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCC-ceecCHhHHHHHHHHH
Q 024578 171 LCKP-SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPAD-HALNSIHNIKEAIPEI 242 (265)
Q Consensus 171 ~~kp-~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~-~~v~~~~el~~~l~~~ 242 (265)
..++ |...++.+ ++.+. ++++||||.||+.+++.+|...++.+.+.. ...++ -++.++.||.+.+.+.
T Consensus 128 ~~~~~K~~~l~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 RQKDPKRQSVIAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred cCcchHHHHHHHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 1133 44444444 56553 799999999999999999998777765543 22333 3778888888877654
No 60
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.75 E-value=2.6e-18 Score=134.00 Aligned_cols=104 Identities=17% Similarity=0.247 Sum_probs=90.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC-ChhHHHHHHhHhCCc---------cccceeeecCCCCCCCCCCCCCCCcc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLGLE---------DCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~-~~~~~~~~l~~~~~~---------~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
....++||+.++|+.| +.+++|+||. ....++..++.+++. .+|+.+++++....+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~----------- 110 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKA----------- 110 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchH-----------
Confidence 4567899999999888 4889999998 888889999999998 999999998865433
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHc--CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~l--g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
||.+.+++.+.+.+ |++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 111 ------------kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 111 ------------KQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred ------------HHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 67777887777777 8999999999999999999999999999998874
No 61
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.74 E-value=2.8e-17 Score=123.62 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=79.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCC--------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNAD--------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 165 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~--------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (265)
.++|++.++|+.| +++++|+||+. ...+...++++++. ++.++.+. ..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 5678888888776 58999999998 78888999999886 44444333 23
Q ss_pred cCcccCCCCCHHHHHHHHHHc-CCCCCcEEEEcC-ChhcHHHHHHcCceEEEEC
Q 024578 166 SNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDD-SARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~l-g~~~~~~i~vGD-~~~Di~~a~~aG~~~i~~~ 217 (265)
.||+++.++.+++++ +++|++++|||| +.+|+.+|+.+|+.+++++
T Consensus 84 ------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 ------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 499999999999999 599999999999 6899999999999999985
No 62
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.74 E-value=6.9e-17 Score=132.17 Aligned_cols=98 Identities=17% Similarity=0.144 Sum_probs=80.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC----ChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~----~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
....+.+++.++|+.+ |.+++++||. ....++.+++.+|+..+|+.+++++....+
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~----------------- 173 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY----------------- 173 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC-----------------
Confidence 3446677799998887 5889999998 666888899999999999998888766543
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||.+. .+++++++ ++||||+.+|+.+|+++|+.++.+.++..
T Consensus 174 ------Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 174 ------QYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ------CCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 67654 35667776 79999999999999999999999987754
No 63
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.70 E-value=6.6e-16 Score=122.96 Aligned_cols=122 Identities=13% Similarity=0.097 Sum_probs=86.4
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
...+.+...+ ...+++||+.++++.+ +.+++|+|++....++..++.+++..+|+.+++++..... .+
T Consensus 59 ~~~~~~~~~~------~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---~g 129 (188)
T TIGR01489 59 LKEDEILEVL------KSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN---DG 129 (188)
T ss_pred CCHHHHHHHH------HhCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC---CC
Confidence 3344555554 3367889999998877 5889999999999999999999999999999987653221 01
Q ss_pred CCCCcc-cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 155 NTDGIE-NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
...+.. .+..+ .....+.+|++.++++.++. +++++||||+.+|+.+|+++++-
T Consensus 130 ~~~~~~~~~~~~-~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 130 RHIVWPHHCHGC-CSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred cEEEecCCCCcc-CcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 111100 00000 11233456788998888765 79999999999999999999753
No 64
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.70 E-value=2.5e-16 Score=127.31 Aligned_cols=183 Identities=14% Similarity=0.106 Sum_probs=121.0
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHH--hcccHHHHHHcCCCCChHHHHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE--HGTTMAGLKAVGYEFDNDEFHAFV 87 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 87 (265)
++.++++|||||||++ ...+. .+....|....-........... +..............+.+.+.+..
T Consensus 3 ~~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~ 72 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVR 72 (212)
T ss_pred CccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4678999999999998 22221 24455555332211111111111 111111112223344455555555
Q ss_pred hccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 88 HGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
.+. .++.||+.++++.+ |.+++|+|++....++++.+.+|++..+...+..++ +. -++.
T Consensus 73 ~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~------------ltG~ 134 (212)
T COG0560 73 EEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GK------------LTGR 134 (212)
T ss_pred Hhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CE------------Eece
Confidence 321 67889999988776 699999999999999999999999888777666554 21 1122
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.-...+.++.|...++++++++|+++++++++|||.||+.|.+.+|...+..+.+.
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 22233445788999999999999999999999999999999999998766655543
No 65
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.70 E-value=8.6e-17 Score=134.35 Aligned_cols=121 Identities=14% Similarity=0.203 Sum_probs=91.3
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
++++.+.++.+ +.+++++||.+.......+..++...+|+.+.++..... ...+||+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~--------------------~~~gKP~ 181 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKA--------------------TVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCc--------------------eeecCCC
Confidence 45666655554 356677777776665555555666666666554432211 1236999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHHHHH
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l 239 (265)
+.+++.++++++++|++++||||+. +|+.+|+++|+.++++.+|.. ...++++++++.++.+++
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999996 899999999999999988741 346899999999998765
No 66
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.69 E-value=7.7e-17 Score=125.63 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=77.0
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChh------------HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQK------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~------------~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++||+.++|+.| +++++|+||++.. .++..++.+|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 678999998887 5899999998763 467788999985 355665554333
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCh--------hcHHHHHHcCceEEE
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSA--------RNIASAKAAGLHTVI 215 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg--~~~~~~i~vGD~~--------~Di~~a~~aG~~~i~ 215 (265)
.||++..++.+++++| +++++++||||+. +|+.+|+++|+.+++
T Consensus 107 ---------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 ---------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred ---------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 3999999999999999 9999999999996 699999999998764
No 67
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.69 E-value=1.3e-16 Score=123.04 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=92.3
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.|+.-+.+++|+||.....+...++.+|+..+|+. .+||++.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~--------------------------------~~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG--------------------------------QSNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec--------------------------------ccchHHHHHH
Confidence 45666677899999999999999999999998766542 1788999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH---HHHHHHHHhcC
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEG 245 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e---l~~~l~~~~~~ 245 (265)
+++++|+++++|+||||+.+|+.+++.+|+. +.+.+... +..+++++.+..+ +.++++++++.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~ 151 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLA 151 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999997 66655433 5668888887754 88888887754
No 68
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.68 E-value=2.2e-16 Score=118.48 Aligned_cols=116 Identities=27% Similarity=0.362 Sum_probs=93.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++|++.++++.+ +.+++|+|++....++..++.+++...++.++++...... ..............
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~ 93 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY-------YPKEGLFLGGGPFD 93 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh-------cccccccccccccc
Confidence 5568889999998887 4789999999999999999999988788888876644321 01111222334455
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
.+||++..++.++++++.+++++++|||+.+|+.+++.+|+.++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 6699999999999999999999999999999999999999988864
No 69
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.67 E-value=2.4e-16 Score=125.05 Aligned_cols=116 Identities=18% Similarity=0.263 Sum_probs=92.3
Q ss_pred HHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHH
Q 024578 104 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 183 (265)
Q Consensus 104 ~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~ 183 (265)
+.++..+++++|+|+.....+...++.+++..+|+. +++++..++.++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g--------------------------------~~~k~~~l~~~~ 105 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG--------------------------------QSNKLIAFSDLL 105 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCcHHHHHHHHH
Confidence 344556789999999999999999999998766541 277789999999
Q ss_pred HHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec------CHhHHHHHHHHHhcCChhhhhh
Q 024578 184 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN------SIHNIKEAIPEIWEGEGEQLEQ 252 (265)
Q Consensus 184 ~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~------~~~el~~~l~~~~~~~~~~~~~ 252 (265)
+++|++|++++||||+.+|+.+++++|+.++ +.+... ...+++++. .+.++.+++....+.+.....|
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~~~~~ 181 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDEAKGQ 181 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhhhcCC
Confidence 9999999999999999999999999999844 544332 456889886 6788888777666655544433
No 70
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.66 E-value=1.5e-16 Score=123.89 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=82.0
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 182 (265)
...|+..+++++|+|+.....++..++.+++..+|+. .||+|+.++.+
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------------------------------~kpkp~~~~~~ 90 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------------------------------IKKKTEPYAQM 90 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------CCCCHHHHHHH
Confidence 4567777899999999999999999999999877763 28889999999
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceec
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALN 230 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~ 230 (265)
++++++++++|++|||+.||+.+++.+|+..++-+.... +..+++++.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence 999999999999999999999999999997666654433 566777765
No 71
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.64 E-value=1.3e-15 Score=124.06 Aligned_cols=128 Identities=12% Similarity=0.111 Sum_probs=85.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
...++||+.++++.+ +.+++|+|++....++.+++.++.. +.+++++..-.. +.+ ..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~----~~~-------------~~ 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSN----EYI-------------HI 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeC----Cee-------------EE
Confidence 467899999998887 5899999999999999999987543 333332211000 000 00
Q ss_pred CCCCHHHH----------HHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-----CCCCCCCceecCHhHHH
Q 024578 172 CKPSLEAI----------ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-----VPVPPADHALNSIHNIK 236 (265)
Q Consensus 172 ~kp~~~~~----------~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-----~~~~~a~~~v~~~~el~ 236 (265)
.+|.+..+ ..++++++..+++++|||||.+|+.+|+.+|+ ++.... .....+...+.++.|+.
T Consensus 128 ~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~ 205 (214)
T TIGR03333 128 DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVR 205 (214)
T ss_pred eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHH
Confidence 13322221 24566666688999999999999999999997 333221 12344667789999999
Q ss_pred HHHHHHhc
Q 024578 237 EAIPEIWE 244 (265)
Q Consensus 237 ~~l~~~~~ 244 (265)
+.|++.++
T Consensus 206 ~~l~~~~~ 213 (214)
T TIGR03333 206 KELENVKE 213 (214)
T ss_pred HHHHHHhc
Confidence 98887653
No 72
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.63 E-value=3.5e-15 Score=124.09 Aligned_cols=70 Identities=20% Similarity=0.319 Sum_probs=60.4
Q ss_pred cCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC------C--CCCCceecCHhHH
Q 024578 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNI 235 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~------~--~~a~~~v~~~~el 235 (265)
.+....+||++.+++.+++.++++++++++|||+. +|+.+|+++|+.++++.+|.. . ..++++++++.++
T Consensus 171 ~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 171 VKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 34455689999999999999999999999999997 899999999999999988753 1 4688888887763
No 73
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.63 E-value=9.4e-15 Score=117.82 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=82.1
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccce-eeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++|++.++++.+ +.+++|+|++....++.+++.+|+..+|.. +...++ +. . .+......+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g~-----------~-~g~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-GI-----------Y-TGNIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-CE-----------E-eCCccCCCCC
Confidence 46789999998776 589999999999999999999998766554 222121 00 0 0111112234
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
+++|...+++++++.++++++++++|||.+|+.+++.+|..++..+
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 6888899999999999999999999999999999999997655443
No 74
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.63 E-value=2.6e-15 Score=118.47 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=78.3
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
+.+.+.||+.++++.+ +.+++|+|++....++..++.+|+...|...+..++-+. ..+...+..+.
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~-----------~~g~~~~~~~~ 138 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGL-----------LTGPIEGQVNP 138 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCE-----------EeCccCCcccC
Confidence 3456789999998877 588999999999999999999998766665544331111 00101111223
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
.+..|+..++.++++++++++++++||||.+|+.+++.+
T Consensus 139 ~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 139 EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 457788999999999999999999999999999999764
No 75
>PLN02645 phosphoglycolate phosphatase
Probab=99.62 E-value=1e-15 Score=131.32 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=64.1
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----------CCCCCceecCHhHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----------VPPADHALNSIHNIKEA 238 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----------~~~a~~~v~~~~el~~~ 238 (265)
.++||++.+++.+++++++++++++||||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|.++
T Consensus 227 ~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~ 306 (311)
T PLN02645 227 VVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTL 306 (311)
T ss_pred cCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHH
Confidence 4579999999999999999999999999998 899999999999999988753 15689999999999886
Q ss_pred HHH
Q 024578 239 IPE 241 (265)
Q Consensus 239 l~~ 241 (265)
++.
T Consensus 307 ~~~ 309 (311)
T PLN02645 307 KAA 309 (311)
T ss_pred hhc
Confidence 653
No 76
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.61 E-value=1.1e-14 Score=125.56 Aligned_cols=113 Identities=17% Similarity=0.302 Sum_probs=88.7
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC---------------ChhHHHHHHhHhCCccccceeeec-----CCCCCCC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRL 150 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~---------------~~~~~~~~l~~~~~~~~fd~i~~~-----~~~~~~~ 150 (265)
.+..++||+.++|+.| +.+++|+||. ....+..+++.+++. |+.++.+ ++...
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~-- 102 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC-- 102 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC--
Confidence 4467899999999888 4889999995 234566677788774 7766543 23233
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceec
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 230 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~ 230 (265)
+||++.++..++++++++|++++||||+.+|+.+|+++|+.+++++.. --
T Consensus 103 ---------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~---------~~ 152 (354)
T PRK05446 103 ---------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE---------TL 152 (354)
T ss_pred ---------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC---------CC
Confidence 499999999999999999999999999999999999999999999542 24
Q ss_pred CHhHHHHHHH
Q 024578 231 SIHNIKEAIP 240 (265)
Q Consensus 231 ~~~el~~~l~ 240 (265)
+++++.+.|.
T Consensus 153 ~~~~i~~~l~ 162 (354)
T PRK05446 153 NWDAIAEQLT 162 (354)
T ss_pred CHHHHHHHHh
Confidence 5666666644
No 77
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.61 E-value=1e-14 Score=114.32 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=76.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCC-hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~-~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.++|++.++|+.+ +.+++|+||++ ...+...++.+++..++ .. .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~-----------------------~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA-----------------------V 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC-----------------------C
Confidence 4567777777766 58899999998 56666666776654221 11 3
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||+++++..++++++++++++++|||+. .|+.+|+++|+.++++.++..
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999999999999999999999999998 799999999999999988754
No 78
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.60 E-value=1.8e-15 Score=127.99 Aligned_cols=117 Identities=21% Similarity=0.231 Sum_probs=79.9
Q ss_pred ChhHHHHHhcCC--CcEEEEeCCChhHHH-HHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 99 DPVLRNLLLSMP--QRKIIFTNADQKHAM-EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 99 ~p~~~~~l~~l~--~~~~i~s~~~~~~~~-~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
++++.++++.++ ..++|+||.+..... ..+...+...+|+.+..... ......+||+
T Consensus 145 y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g--------------------~~~~~~gKP~ 204 (279)
T TIGR01452 145 YAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASG--------------------RQPLVVGKPS 204 (279)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhC--------------------CceeccCCCC
Confidence 566666666663 235677776653321 11223333344444432211 1112347999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------------CCCCCceecCHhHH
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------------VPPADHALNSIHNI 235 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------------~~~a~~~v~~~~el 235 (265)
+.++..+++++|++|++++||||+. .||.+|+++|+.++++.+|.. ...++++++++.+|
T Consensus 205 p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 205 PYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999999999999999999999995 899999999999999988853 13588888887764
No 79
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.59 E-value=3.7e-14 Score=116.03 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=82.6
Q ss_pred hHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCC----hhHHHHHHhHhCC--ccccceeeecCCCCCCC
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNAD----QKHAMEVLGRLGL--EDCFEGIICFETINPRL 150 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~----~~~~~~~l~~~~~--~~~fd~i~~~~~~~~~~ 150 (265)
.+.+.+.+.+.. .....|+||+.++|+.+ +.+++++||.. ......+++.+|+ ..+|+.+++++.. .
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~- 173 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--G- 173 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--C-
Confidence 445555555442 24578899999999888 58899999964 4466777777999 7888888877643 1
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||.+.. .++++++ ++||||+.+|+.+|++||+.++.+.++..
T Consensus 174 ----------------------K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 174 ----------------------QYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred ----------------------CCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 555432 5556666 89999999999999999999999988754
No 80
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.58 E-value=1.6e-13 Score=111.60 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=93.9
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC-----CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM-----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l-----~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
...+++.+.+ ..+++.||+.++++.+ +..++|+|+++..+++.+|+++|+...|+.|+++...-..
T Consensus 58 vt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~--- 128 (234)
T PF06888_consen 58 VTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA--- 128 (234)
T ss_pred CCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC---
Confidence 5567777766 5678899999999888 3779999999999999999999999999999998632211
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc---CCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
.|-..+.---.+.+..+...--|...++++++.. |+..++++|||||.||+..+...+-.-+.+++
T Consensus 129 ~G~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 129 DGRLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred CceEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence 1111111000011112222235678888888774 77889999999999999999987765444443
No 81
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.58 E-value=2.2e-14 Score=118.82 Aligned_cols=219 Identities=17% Similarity=0.184 Sum_probs=131.7
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhh--------HHHHHHHHHHHhcccHHHHHH-cCCCC
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESE--------VPRMCLELYREHGTTMAGLKA-VGYEF 78 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (265)
.++.+++++||+||||++....+..+.. .+.. ++..|.+..- .....+. +.. .+.+.
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e-~l~~--L~~~g~~~iflTNn~~~s~~~~~~~-----------L~~~~~~~~ 69 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAE-ALKR--LKAAGKPVIFLTNNSTRSREVVAAR-----------LSSLGGVDV 69 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHH-HHHH--HHHcCCeEEEEeCCCCCCHHHHHHH-----------HHhhcCCCC
Confidence 3567899999999999997776665443 2332 3444443221 1111111 112 12222
Q ss_pred ChH-------HHHHHHhccccCCCCCC--ChhHHHHHhcCCCc-----------EEEEeCCChhHHHHHHhHh-CCcccc
Q 024578 79 DND-------EFHAFVHGKLPYEKLKP--DPVLRNLLLSMPQR-----------KIIFTNADQKHAMEVLGRL-GLEDCF 137 (265)
Q Consensus 79 ~~~-------~~~~~~~~~~~~~~~~~--~p~~~~~l~~l~~~-----------~~i~s~~~~~~~~~~l~~~-~~~~~f 137 (265)
.++ .-..++.+.....++.. -++..+.++.+++. .+++.-......+.+.+.+ .+..-.
T Consensus 70 ~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~ 149 (269)
T COG0647 70 TPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGA 149 (269)
T ss_pred CHHHeecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCC
Confidence 221 22233333222122222 36788888887622 2333332222222222211 112225
Q ss_pred ceeeecCCCCCCCCCCCCCCCcc-------cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHc
Q 024578 138 EGIICFETINPRLQPADNTDGIE-------NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA 209 (265)
Q Consensus 138 d~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~a 209 (265)
..|.++.+...+.+.+-.++-.+ .++..+ ...|||.+.+++.+++.++.+++++++|||++ +||.+|+++
T Consensus 150 ~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~--~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~ 227 (269)
T COG0647 150 PFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP--TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAA 227 (269)
T ss_pred cEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc--cccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHc
Confidence 56777777766644443333333 333332 57899999999999999999999999999999 699999999
Q ss_pred CceEEEECCCCC--------CCCCCceecCHhHHHHHHHHH
Q 024578 210 GLHTVIVGSSVP--------VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 210 G~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l~~~ 242 (265)
|+.+++|.+|.. ...+++++.++.++...+..+
T Consensus 228 G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~~ 268 (269)
T COG0647 228 GLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKEL 268 (269)
T ss_pred CCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhcc
Confidence 999999988864 467899999999988876653
No 82
>PRK10444 UMP phosphatase; Provisional
Probab=99.57 E-value=2.5e-14 Score=118.63 Aligned_cols=68 Identities=25% Similarity=0.280 Sum_probs=61.5
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
....+||++.+++.+++.+++++++|+||||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 445689999999999999999999999999997 899999999999999988854 35799999999887
No 83
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.57 E-value=4.8e-15 Score=121.92 Aligned_cols=72 Identities=15% Similarity=0.226 Sum_probs=58.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+.+|+.+++.+++.+|++++++++|||+.||++|++.+|+.+++-+.... +..+++++.+.++ +.+.|++++
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 57889999999999999999999999999999999999986555443332 5678888876555 777776653
No 84
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.56 E-value=2e-14 Score=107.40 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCC-ChhHHHHHHhHhC-------CccccceeeecCCCCCCCCCCCCCCCcccCcCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLG-------LEDCFEGIICFETINPRLQPADNTDGIENNSFS 165 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~-~~~~~~~~l~~~~-------~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (265)
+++||+.++|+.+ +.+++|+||. ........++.++ +..+|+.++++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~-------------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW-------------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--------------------
Confidence 4778899988887 5889999999 7888888889888 7788888887752
Q ss_pred cCcccCCCCCHHHHHHHHHHcC--CCCCcEEEEcCChhcHHHHHH
Q 024578 166 SNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKA 208 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~lg--~~~~~~i~vGD~~~Di~~a~~ 208 (265)
+|+++.+..+++++| ++|++|+||||+..|+...+.
T Consensus 89 -------~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 -------LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 788999999999999 999999999999999876653
No 85
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.54 E-value=5.3e-14 Score=120.41 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=91.0
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
...++|++.++++.+ +.+++++|+.+....+..++++++.. +|+.+++.+.... +-....
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~----------------~~~~~~ 248 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH----------------FQREQG 248 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh----------------hcccCC
Confidence 346789999998887 58899999999999999999999886 8999888773110 000000
Q ss_pred CCCCCHHHHHHHHHHcCC-CCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 171 LCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.+||++..+..++++++. ++++|++|||+.+|+.+|+++|+.++++.+|.
T Consensus 249 ~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 249 DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 149999999999999988 67999999999999999999999999998873
No 86
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.54 E-value=2e-14 Score=121.15 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+.++ +.++|++++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 35688999999999999999999999999999999999986544 34332 5678998877665 777776654
No 87
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.54 E-value=7.7e-14 Score=105.02 Aligned_cols=80 Identities=19% Similarity=0.338 Sum_probs=70.5
Q ss_pred hcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc
Q 024578 107 LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 186 (265)
Q Consensus 107 ~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l 186 (265)
+..+.+++|+||+....+....+.+|+. .++.+. ||.+..++++++++
T Consensus 59 k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A~----------------------------KP~~~~fr~Al~~m 106 (175)
T COG2179 59 KEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRAK----------------------------KPFGRAFRRALKEM 106 (175)
T ss_pred HhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeeccc----------------------------CccHHHHHHHHHHc
Confidence 3346889999999999999999999864 444433 99999999999999
Q ss_pred CCCCCcEEEEcCCh-hcHHHHHHcCceEEEECC
Q 024578 187 NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 187 g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~ 218 (265)
++++++|+||||.. +|+.++..+|+++|.|..
T Consensus 107 ~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 107 NLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred CCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 99999999999999 799999999999999954
No 88
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.53 E-value=4.5e-15 Score=113.75 Aligned_cols=93 Identities=16% Similarity=0.063 Sum_probs=81.8
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
.+.++||+.++|+.+ +++++|+|++....++..++++++.. +|+.++++++....
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~---------------------- 100 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV---------------------- 100 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccccc----------------------
Confidence 457789999999998 48899999999999999999999864 56999998887653
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 213 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~ 213 (265)
||+ |.++++++|.+|++|++|||+.+|+.+++++|+..
T Consensus 101 -KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 -KGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -CCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 886 88899999999999999999999999999998754
No 89
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.53 E-value=2.3e-14 Score=116.36 Aligned_cols=88 Identities=22% Similarity=0.311 Sum_probs=74.6
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++.|++.++++.| +++++++|+.+...+....+.+|+. +.++.+...
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~------------------------- 176 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI------------------------- 176 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE-------------------------
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc-------------------------
Confidence 346779999998887 5789999999999999999999983 333333311
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 210 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG 210 (265)
+||.+.++..+++.+++++++|+||||+.||+.++++||
T Consensus 177 ~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 299999999999999999999999999999999999987
No 90
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.50 E-value=2.4e-14 Score=117.32 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN 234 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e 234 (265)
+.+|+.+++++++++|++++++++|||+.||+.|++.+|+.+++-+.... +..|++++.+..+
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 57889999999999999999999999999999999999986555443332 6678888765544
No 91
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.47 E-value=1.7e-12 Score=100.98 Aligned_cols=122 Identities=18% Similarity=0.301 Sum_probs=93.7
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
+.+.|++.+.+..+ +++++++||.+ ...+...|+..|+. ||.++.+......
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~-------- 99 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYCPHHPED-------- 99 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCC--------
Confidence 45677888877666 69999999942 33455666677764 8888887765431
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCH
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSI 232 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~ 232 (265)
.|..+||++.++..+++++++++...++|||+..|++.|.++|+..+.+.++.. ....++++.++
T Consensus 100 ----------~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (181)
T COG0241 100 ----------NCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSL 169 (181)
T ss_pred ----------CCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccH
Confidence 134469999999999999999999999999999999999999999887765533 22456777777
Q ss_pred hHHHH
Q 024578 233 HNIKE 237 (265)
Q Consensus 233 ~el~~ 237 (265)
.++..
T Consensus 170 ~~~~~ 174 (181)
T COG0241 170 AEFAN 174 (181)
T ss_pred HHHHH
Confidence 77763
No 92
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.46 E-value=2.7e-13 Score=91.53 Aligned_cols=65 Identities=31% Similarity=0.467 Sum_probs=59.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
++||++.++..++++++++++++++|||+ .+|+.+|+++|+.++++.+|.. ...++++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 47999999999999999999999999999 7999999999999999988754 36899999999885
No 93
>PRK11590 hypothetical protein; Provisional
Probab=99.45 E-value=1.6e-12 Score=105.55 Aligned_cols=105 Identities=13% Similarity=0.041 Sum_probs=72.0
Q ss_pred CCCChhHHHHHh-cC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~-~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++||+.+.|+ .+ +.+++|+|+.....++..++.+++.. .+.+++++-... -++......|.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~------------~tg~~~g~~c~ 160 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRR------------YGGWVLTLRCL 160 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEE------------EccEECCccCC
Confidence 567999999994 33 57999999999999999999988532 455665542111 11222222334
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
|.-|...+++.+ +.+.+.+.+.|||.+|+.+...+|-. +.|+
T Consensus 161 g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vn 202 (211)
T PRK11590 161 GHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVT 202 (211)
T ss_pred ChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCC-EEEC
Confidence 455554444444 66778899999999999999999954 4443
No 94
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.43 E-value=9.5e-13 Score=101.30 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=93.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.+.++.||+.++...| +.+++++|++....+..+...+|+. +..++.+... ++.++.+.++....++.
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~--~~n~yAN~l~-------fd~~Gk~~gfd~~~pts 155 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP--KSNIYANELL-------FDKDGKYLGFDTNEPTS 155 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc--Hhhhhhheee-------eccCCcccccccCCccc
Confidence 4678889999998877 5889999999999999999999987 4445544321 34456666666666666
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 235 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el 235 (265)
-+-.|++.+..+.+ +.+-+.++||||+.+|+++...+. +++..+.+ +..+.+.++++..|
T Consensus 156 dsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~pa~---afi~~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 156 DSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPPAD---AFIGFGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred cCCccHHHHHHHHh--CCChheeEEecCCccccccCCchh---hhhccCCceEcHhhHhccHHHHHHHHHH
Confidence 67788999988877 778899999999999999887732 33333332 45566656555544
No 95
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.41 E-value=1.5e-12 Score=109.41 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHhc
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIWE 244 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~~ 244 (265)
+..|..+++.+++++|++++++++|||+.||++|.+.+|.++++-+..+. +..|+++..+.++ +.+.|++++.
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 67889999999999999999999999999999999999986665555333 5566665554443 7777777653
No 96
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.40 E-value=1.5e-11 Score=106.06 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=60.1
Q ss_pred ccCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC-------CCCCCc
Q 024578 169 RILCKPSLEAIETAIRIA--------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADH 227 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~l--------g~-----~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~-------~~~a~~ 227 (265)
..+|||++.+++.+++.+ +. ++++++||||+. +||.+|+++||.+++|.+|.. ...+++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 577999999999988887 43 457999999999 899999999999999987632 235889
Q ss_pred eecCHhHHHHHH
Q 024578 228 ALNSIHNIKEAI 239 (265)
Q Consensus 228 ~v~~~~el~~~l 239 (265)
+++++.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999988765
No 97
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.40 E-value=4.1e-12 Score=99.72 Aligned_cols=155 Identities=12% Similarity=0.138 Sum_probs=101.3
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
..+++.+.+ ..++..||+.++++.+ + +.++|+|..+..+++.+|+++++.++|..|++++..... .|
T Consensus 72 ~~~~ik~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da---~G 142 (256)
T KOG3120|consen 72 RIAEIKQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA---SG 142 (256)
T ss_pred CHHHHHHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC---CC
Confidence 355566555 5678999999998877 3 578999999999999999999999999999987632110 00
Q ss_pred CCCCc-----ccCcCCcCcccCCCCCHHHHHHHHHH---cCCCCCcEEEEcCChhcHHHHHHc-CceEEEECCCCC----
Q 024578 155 NTDGI-----ENNSFSSNQRILCKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAA-GLHTVIVGSSVP---- 221 (265)
Q Consensus 155 ~~~~~-----~~~~~~~~~~~~~kp~~~~~~~~~~~---lg~~~~~~i~vGD~~~Di~~a~~a-G~~~i~~~~~~~---- 221 (265)
---+. +++..|+...| |...+.++... -|+.-++++|||||.||+...... +..+++...++.
T Consensus 143 ~L~v~pyH~~hsC~~CPsNmC----Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~ 218 (256)
T KOG3120|consen 143 RLLVRPYHTQHSCNLCPSNMC----KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKL 218 (256)
T ss_pred cEEeecCCCCCccCcCchhhh----hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhh
Confidence 00000 12223333222 23444444433 378888999999999998776665 445555544554
Q ss_pred ------C-CCCCceecCHhHHHHHHHHHhcCC
Q 024578 222 ------V-PPADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 222 ------~-~~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
. ...-..-++-+|+.++|.+++..+
T Consensus 219 ~~~~p~~~kasV~~W~sg~d~~~~L~~lik~~ 250 (256)
T KOG3120|consen 219 ISANPMLLKASVLEWSSGEDLERILQQLIKTI 250 (256)
T ss_pred hhcCcceeeeeEEecccHHHHHHHHHHHHHHh
Confidence 1 112234567788888888886554
No 98
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.39 E-value=6.7e-13 Score=111.99 Aligned_cols=75 Identities=8% Similarity=0.048 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCc--eecCHhH--HHHHHHHHhcCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADH--ALNSIHN--IKEAIPEIWEGE 246 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~--~v~~~~e--l~~~l~~~~~~~ 246 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+.... +..|++ ++.+.++ +.+.|++++..|
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~~~ 265 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYP 265 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhcCC
Confidence 56889999999999999999999999999999999999986555443332 555665 5655444 888888887543
No 99
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.38 E-value=3.8e-13 Score=109.58 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 232 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~ 232 (265)
+..|..+++.+++.+|++++++++|||+.||++|++.+|+.+++-+.... +..|++++.+.
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNP 206 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCC
Confidence 47889999999999999999999999999999999999987655544332 56678877643
No 100
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.37 E-value=2.2e-12 Score=108.70 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|+.+++-+.... +..|++++.+.++ +.+.|++++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 57889999999999999999999999999999999999986555544333 6778998876544 777777664
No 101
>PRK10976 putative hydrolase; Provisional
Probab=99.37 E-value=2.3e-12 Score=108.39 Aligned_cols=72 Identities=13% Similarity=0.132 Sum_probs=57.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCC--ceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPAD--HALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~--~~v~~~~e--l~~~l~~~~ 243 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|+..++-+.... +..|+ +++.+.++ +.+.|++++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 57889999999999999999999999999999999999987655554433 55555 66666554 777777664
No 102
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.37 E-value=1.9e-11 Score=103.25 Aligned_cols=73 Identities=19% Similarity=0.186 Sum_probs=57.1
Q ss_pred CCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEEEECCCCC-C----CCC-Ccee--cC--HhHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP-V----PPA-DHAL--NS--IHNIKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~----~~a-~~~v--~~--~~el~~~l~ 240 (265)
+ .|...++++++.+|+++ +++++|||+.||++|++.+|+.+++-+.... + ..+ +.+. .+ -+.+.+.|+
T Consensus 189 ~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 189 G-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred C-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 5 77889999999999999 9999999999999999999987666665544 3 233 4555 33 346888888
Q ss_pred HHhcC
Q 024578 241 EIWEG 245 (265)
Q Consensus 241 ~~~~~ 245 (265)
+++.+
T Consensus 268 ~~~~~ 272 (273)
T PRK00192 268 KLLSK 272 (273)
T ss_pred HHHhh
Confidence 87653
No 103
>PLN02887 hydrolase family protein
Probab=99.35 E-value=1.9e-11 Score=112.05 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|+++++-+..+. +..|++|+.+.++ +.+.|+++
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 57889999999999999999999999999999999999986555554433 6778998876555 66666654
No 104
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.34 E-value=5.3e-12 Score=108.88 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=77.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhH----hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~----~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
++|++.++|+.+ |++++|+|+++...+...++. +++.++|+.+..+.
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~-------------------------- 85 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINW-------------------------- 85 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEec--------------------------
Confidence 477888888777 588999999999999999999 88888898876653
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
|||++.+..+++++|+++++++||||+..|+.++++++..
T Consensus 86 --~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 86 --GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999997754
No 105
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.31 E-value=9.5e-11 Score=97.58 Aligned_cols=121 Identities=16% Similarity=0.131 Sum_probs=84.6
Q ss_pred CCCChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 76 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
...+.+.+.....+ ..+.+.||+.++++.| +.+++|+|++....++.+++.+++.+.+..++++......
T Consensus 104 ~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~--- 176 (277)
T TIGR01544 104 QAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDE--- 176 (277)
T ss_pred CCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECC---
Confidence 34456677766643 4678999999999887 5899999999999999999999987777777665422110
Q ss_pred CCCCCCcccCcCCcCcccCCCCCH-HHHHHHHHHcC--CCCCcEEEEcCChhcHHHHHHc
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSL-EAIETAIRIAN--VDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~-~~~~~~~~~lg--~~~~~~i~vGD~~~Di~~a~~a 209 (265)
++...+ + +.+.+-.-.|. ..++...+.++ .++++|++||||.+|+.||..+
T Consensus 177 ----dGvltG-~-~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 177 ----DGVLKG-F-KGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ----CCeEeC-C-CCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 011111 1 11111112223 56667888898 8999999999999999998666
No 106
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.30 E-value=1.9e-12 Score=96.34 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=78.0
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
....+..++.++.|+|+.....++...+.+|+...|.. - +.|...++.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG----~----------------------------~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG----I----------------------------SDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec----h----------------------------HhHHHHHHH
Confidence 35678888999999999999999999999998644333 2 677899999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCceec
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALN 230 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v~ 230 (265)
+++++++.+++|.|+||..+|+.....+|..++..+... -...++++.+
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTS 140 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhh
Confidence 999999999999999999999999999998655443321 1444555444
No 107
>PRK08238 hypothetical protein; Validated
Probab=99.29 E-value=1.2e-10 Score=104.95 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=75.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++.+|++.+.++.+ |.+++|+|+.+...++..++++|+ ||.++++++...
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~---------------------- 123 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN---------------------- 123 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc----------------------
Confidence 3456779999999887 588999999999999999999987 899999886543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+||++.. +.+.+.++ .+++.++||+.+|+.+++.+| +.+.++.+.
T Consensus 124 -~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 124 -LKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred -cCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 2554432 23445555 356899999999999999999 677776553
No 108
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.29 E-value=2.5e-11 Score=102.33 Aligned_cols=73 Identities=11% Similarity=0.056 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHcCC---CCCcEEEEcCChhcHHHHHHcCceEEEECCC-C------CCCCCCceecCHh--HHHHHH
Q 024578 172 CKPSLEAIETAIRIANV---DPKKTIFFDDSARNIASAKAAGLHTVIVGSS-V------PVPPADHALNSIH--NIKEAI 239 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~---~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~------~~~~a~~~v~~~~--el~~~l 239 (265)
+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|+.+++-+.. . .+..++++..... .+.+.|
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 57889999999999999 9999999999999999999999876666433 1 1335777776655 688888
Q ss_pred HHHhc
Q 024578 240 PEIWE 244 (265)
Q Consensus 240 ~~~~~ 244 (265)
+.++.
T Consensus 265 ~~~~~ 269 (271)
T PRK03669 265 DHFFS 269 (271)
T ss_pred HHHHh
Confidence 87764
No 109
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.27 E-value=1.2e-11 Score=111.90 Aligned_cols=89 Identities=25% Similarity=0.273 Sum_probs=73.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCCh------------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~------------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++||+.+.|+.| +++++|+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 578888888887 699999999766 3577888888875 887776654444
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC----CCCCcEEEEcCChhcHHHHHHcCc
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg----~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
+||++.++..++++++ +++++++||||+..|+..++.+|-
T Consensus 262 ---------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 ---------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ---------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 4999999999999985 899999999999999988777764
No 110
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.27 E-value=9.5e-11 Score=89.55 Aligned_cols=204 Identities=12% Similarity=0.094 Sum_probs=120.8
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHc--CCCCChHHHHHHHhccc
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV--GYEFDNDEFHAFVHGKL 91 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (265)
.|+.|+|||+.-.. ... ++.+.+|.+... .+...+....-.....+..+ .+..+.++..+.+
T Consensus 5 vi~sDFDGTITl~D--s~~--------~itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~l---- 68 (220)
T COG4359 5 VIFSDFDGTITLND--SND--------YITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFL---- 68 (220)
T ss_pred EEEecCCCceEecc--hhH--------HHHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHH----
Confidence 45669999996311 111 256666665433 23333333222222222111 1223346666666
Q ss_pred cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccce--eeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 92 PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 92 ~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~--i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
..++.+.||..++++++ +.+.+|+|++....+..+++.+.-.+..+. +++.+..-. +-+.|.+.+...
T Consensus 69 -lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih---~dg~h~i~~~~d--- 141 (220)
T COG4359 69 -LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIH---IDGQHSIKYTDD--- 141 (220)
T ss_pred -HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEc---CCCceeeecCCc---
Confidence 25578899999999888 489999999999999999999864433222 222221111 123444444221
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE---EECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV---IVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i---~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
...+..|| . .++.+.-+++.++|+|||..|+++|+....-++ +++...++.....-+.++.|++..+++++
T Consensus 142 s~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl 215 (220)
T COG4359 142 SQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEFETFYEILKEIEKVL 215 (220)
T ss_pred cccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCcccccHHHHHHHHHHHH
Confidence 22222344 3 445555577889999999999999999875333 22333345556667788888888888877
Q ss_pred cCC
Q 024578 244 EGE 246 (265)
Q Consensus 244 ~~~ 246 (265)
+.+
T Consensus 216 ~~~ 218 (220)
T COG4359 216 EVQ 218 (220)
T ss_pred hhh
Confidence 543
No 111
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.27 E-value=2.3e-10 Score=87.32 Aligned_cols=197 Identities=18% Similarity=0.215 Sum_probs=120.0
Q ss_pred CCccEEEEecCCCccCCc---ccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH------HHHH---cCCC
Q 024578 10 ANYECLLFDLDDTLYPLS---TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA------GLKA---VGYE 77 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~ 77 (265)
.|.|+++.|+.||+..-. .....-..+.+.+++.+..+-+. ............|.... .+.+ .+..
T Consensus 2 ~m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~--v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K 79 (229)
T COG4229 2 VMVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSE--VKKIVDEVLSEFGIANSEEALVALLLEWIAEDSK 79 (229)
T ss_pred cchhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCCh--hhHHHHHHHHHhCccchHHHHHHHHHHHHhcccc
Confidence 345899999999997521 22233344456665555554332 11122233333333321 0101 1111
Q ss_pred CCh-HHHHH-HHhccccC--CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCC
Q 024578 78 FDN-DEFHA-FVHGKLPY--EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETIN 147 (265)
Q Consensus 78 ~~~-~~~~~-~~~~~~~~--~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~ 147 (265)
... ..+.- .|.+.+.- -+.+++|++.+.+++. +++++|.|+++....+-.+.+- ++..+|+..+-. .++
T Consensus 80 ~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG 158 (229)
T COG4229 80 DTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG 158 (229)
T ss_pred cchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc
Confidence 111 11111 12222211 1467899999999875 6999999999988877776643 233445444322 223
Q ss_pred CCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCC-
Q 024578 148 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD- 226 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~- 226 (265)
.|....-|.++++..|++|.+++|+.|.++.+.+|+.+|+.+..+.+..+.+.+|
T Consensus 159 ------------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~ 214 (229)
T COG4229 159 ------------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDG 214 (229)
T ss_pred ------------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCC
Confidence 2778889999999999999999999999999999999999999987755433333
Q ss_pred ---ceecCHh
Q 024578 227 ---HALNSIH 233 (265)
Q Consensus 227 ---~~v~~~~ 233 (265)
.++.+++
T Consensus 215 ~~~~~~~sf~ 224 (229)
T COG4229 215 QGFLVYKSFE 224 (229)
T ss_pred cCceeeechh
Confidence 3555554
No 112
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.26 E-value=1e-10 Score=96.53 Aligned_cols=50 Identities=26% Similarity=0.476 Sum_probs=46.3
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCh-hcHHHHHHcCceEEEECCC
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKT-IFFDDSA-RNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~-i~vGD~~-~Di~~a~~aG~~~i~~~~~ 219 (265)
..+||++.+++.++++++++++++ +||||+. +|+.+|+++|+.++++.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 467999999999999999998887 9999998 7999999999999999764
No 113
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.26 E-value=1.5e-11 Score=95.77 Aligned_cols=76 Identities=21% Similarity=0.390 Sum_probs=64.2
Q ss_pred cCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh-cHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHH
Q 024578 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK 236 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~ 236 (265)
.+...+|||.+..|+.+++.+|++|++++||||..+ |+-.|+.+||..+.|..|.- +..++..++++.|-.
T Consensus 174 ~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AV 253 (262)
T KOG3040|consen 174 CEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAV 253 (262)
T ss_pred ceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHH
Confidence 455678999999999999999999999999999996 89999999999999976531 456777888887777
Q ss_pred HHHHH
Q 024578 237 EAIPE 241 (265)
Q Consensus 237 ~~l~~ 241 (265)
++|-+
T Consensus 254 d~I~q 258 (262)
T KOG3040|consen 254 DLIIQ 258 (262)
T ss_pred HHHHh
Confidence 66544
No 114
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.25 E-value=1.2e-10 Score=94.30 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=71.2
Q ss_pred CCCChhHHHHHh-cC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~-~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++|++.+.|+ .+ |.+++|+|+.....++++.+..++.. .+.+++.+-... .++.....+|.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~------------~gg~~~g~~c~ 159 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERG------------NGGWVLPLRCL 159 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEe------------CCceEcCccCC
Confidence 467999999995 33 68999999999999999998865433 245555541111 11222333344
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
|.-|...+++.+ +.+.+.+.+.|||.+|+.|...+|-. +.|+
T Consensus 160 g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred ChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCc-EEEC
Confidence 555555555444 55667889999999999999999964 4443
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.24 E-value=4.9e-11 Score=97.52 Aligned_cols=43 Identities=16% Similarity=0.068 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
+-.|+.+++.+++++|++++++++|||+.||++|.+.+|..++
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 4567889999999999999999999999999999999998655
No 116
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.19 E-value=3.2e-10 Score=93.64 Aligned_cols=79 Identities=24% Similarity=0.282 Sum_probs=68.3
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh-cHHHHHHcCceEEEECCCCC------------CCCCCc
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP------------VPPADH 227 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-Di~~a~~aG~~~i~~~~~~~------------~~~a~~ 227 (265)
....-+++.++|||.+.+++.++++++++|++|+||||+.+ ||.-++++|++++++.+|.. +..+||
T Consensus 212 ~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDy 291 (306)
T KOG2882|consen 212 KFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDY 291 (306)
T ss_pred HHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCch
Confidence 56677788999999999999999999999999999999995 99999999999999977643 345888
Q ss_pred eecCHhHHHHHH
Q 024578 228 ALNSIHNIKEAI 239 (265)
Q Consensus 228 ~v~~~~el~~~l 239 (265)
.++++.++.+.+
T Consensus 292 y~~~l~d~~~~~ 303 (306)
T KOG2882|consen 292 YADSLGDLLPLL 303 (306)
T ss_pred HHhhHHHHhhhc
Confidence 888888877654
No 117
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.16 E-value=4.2e-11 Score=92.77 Aligned_cols=98 Identities=19% Similarity=0.340 Sum_probs=68.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC-ChhHHHHHHhHhCCc----------cccceeeecCCCCCCCCCCCCCCCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLGLE----------DCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~-~~~~~~~~l~~~~~~----------~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+.+.++|++.++|+.+ +.+++++|.. ....+++.|+.+++. ++|+..-...
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~--------------- 106 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP--------------- 106 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS---------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec---------------
Confidence 5678899999988887 5899999965 456899999999988 6666533222
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
-+|..-++.+.++.|++.++++||+|...++...+..|+.++.+.+|
T Consensus 107 -------------gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 107 -------------GSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp -------------S-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred -------------CchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 46789999999999999999999999999999999999999999987
No 118
>PTZ00445 p36-lilke protein; Provisional
Probab=99.12 E-value=5.1e-10 Score=88.40 Aligned_cols=52 Identities=23% Similarity=0.229 Sum_probs=47.6
Q ss_pred ccCCCCCHHH--H--HHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 169 RILCKPSLEA--I--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 169 ~~~~kp~~~~--~--~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.++.||.+++ | +++++++|+.|++|+||+|+..++.+|+++|++++.+..++
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 3556999999 8 99999999999999999999999999999999999997653
No 119
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.09 E-value=5.2e-09 Score=89.96 Aligned_cols=124 Identities=17% Similarity=0.172 Sum_probs=83.5
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C-------CccccceeeecCCCC---CCCCCCCCCCCcc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G-------LEDCFEGIICFETIN---PRLQPADNTDGIE 160 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~-------~~~~fd~i~~~~~~~---~~~~~~~~~~~~~ 160 (265)
.+.+.||+.++|+.+ +.+++|+||.+...+...++.+ + +.++||.|+++..=. ....+=+..+...
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 456789999999887 5889999999999999999996 6 779999998875311 1111111111111
Q ss_pred cCcCCcCcccCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHH-HcCceEEEECC
Q 024578 161 NNSFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 218 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~-~aG~~~i~~~~ 218 (265)
..-.......+.+.+ .--...+.+.+|+++++++||||+. .|+..++ .+||.++++-.
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 100111100000100 1234567788899999999999999 6999998 99999998853
No 120
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.07 E-value=1.5e-09 Score=90.50 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+.+|+.+++.+++.+|++++++++|||+.||+.|++.++..++.+.+..
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 5899999999999999999999999999999999999766677887664
No 121
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.07 E-value=2.6e-10 Score=90.94 Aligned_cols=95 Identities=19% Similarity=0.309 Sum_probs=62.5
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCH
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 176 (265)
|++.++++.+ +.+++|+|++....++.+++.+++.. +.++++.. ... + +....+...+... + .|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~-~~~----~--~~~~~~~~~~~~~--~-~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNEL-FDN----G--GGIFTGRITGSNC--G-GKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEE-ECT----T--CCEEEEEEEEEEE--S-HHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEee-eec----c--cceeeeeECCCCC--C-cHH
Confidence 5666888665 79999999999999999999988763 23444443 110 0 0000001111000 0 267
Q ss_pred HHHHHH---HHHcCCCCCcEEEEcCChhcHHHHH
Q 024578 177 EAIETA---IRIANVDPKKTIFFDDSARNIASAK 207 (265)
Q Consensus 177 ~~~~~~---~~~lg~~~~~~i~vGD~~~Di~~a~ 207 (265)
..++.+ ... +.+++.+++||||.+|+.+++
T Consensus 160 ~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 777777 445 888999999999999999985
No 122
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.06 E-value=1.9e-10 Score=96.17 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=50.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIH 233 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~ 233 (265)
+-.|..+++.+++.+|++++++++|||+.||+.|++.+|+.+++.+.... +..|++++.+.+
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNN 248 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCC
Confidence 57889999999999999999999999999999999999987666433222 556777776644
No 123
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.03 E-value=1.5e-09 Score=89.62 Aligned_cols=69 Identities=17% Similarity=0.064 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCC----ceecCH--hHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD----HALNSI--HNIKEAIPE 241 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~----~~v~~~--~el~~~l~~ 241 (265)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|...+ +.+... +..++ +++.+. +.+.+.|.+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia-v~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV-VGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE-EcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 5899999999999999999999999999999999999997654 554433 34455 555432 236665544
No 124
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.02 E-value=3.1e-09 Score=88.18 Aligned_cols=87 Identities=14% Similarity=0.090 Sum_probs=69.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHH--HHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAM--EVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~--~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.++||+.++|+.+ +.+++++||....... ..++.+|+.. +|+.|+++.+..
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~----------------------- 80 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA----------------------- 80 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-----------------------
Confidence 4677888887776 5889999998887665 7889999987 899999877432
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
...+..++++++.+++++++|||+..|+.....+|.
T Consensus 81 -----~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 81 -----VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 246667778889999999999999999887765553
No 125
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.01 E-value=5.4e-09 Score=87.04 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChh---HHHHHHhHhCCccc-cceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDC-FEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l~~~~~~~~-fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
....++||+.++++.+ |.+++++||.... .....|+.+|+... ++.++..++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~--------------------- 173 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD--------------------- 173 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC---------------------
Confidence 3457899999999866 6889999998744 45577888888753 466665542
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 206 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a 206 (265)
.++|+...+.+.+.+++ +++|||+.+|+..+
T Consensus 174 -----~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 174 -----KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred -----CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 25677888888887776 89999999999653
No 126
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.95 E-value=4.4e-09 Score=87.99 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCChhcHHHHHHcCceEEEECCCC---C-CCC--C-CceecCH--hHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSSV---P-VPP--A-DHALNSI--HNIKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~--~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~---~-~~~--a-~~~v~~~--~el~~~l~ 240 (265)
+-.|...++++++.+|++ ++++++|||+.||+.|.+.+|..+++-+... . +.. + +++..+. +.+.+.|+
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 478899999999999999 9999999999999999999998766655542 2 333 3 3666443 33666666
Q ss_pred HH
Q 024578 241 EI 242 (265)
Q Consensus 241 ~~ 242 (265)
++
T Consensus 254 ~~ 255 (256)
T TIGR01486 254 HL 255 (256)
T ss_pred Hh
Confidence 54
No 127
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.91 E-value=1.2e-09 Score=90.63 Aligned_cols=95 Identities=20% Similarity=0.176 Sum_probs=68.5
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccccee--eecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+|++.++++.+ +.++ |+||.+.......+..++...+|..+ .+.+.. ..+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~-----------------------~~gK 195 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVI-----------------------YSGK 195 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEe-----------------------cCCC
Confidence 56776666654 3444 77777766665555555555445443 222221 2379
Q ss_pred CCHHHHHHHHHHcCCC-CCcEEEEcCC-hhcHHHHHHcCceEEEEC
Q 024578 174 PSLEAIETAIRIANVD-PKKTIFFDDS-ARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~-~~~~i~vGD~-~~Di~~a~~aG~~~i~~~ 217 (265)
|++++++.++++++.. +++++||||+ .+|+.+|+++|+.++++.
T Consensus 196 P~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 196 PYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred CCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999999999999975 6789999999 599999999999999885
No 128
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.91 E-value=2e-09 Score=89.12 Aligned_cols=62 Identities=26% Similarity=0.338 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN 234 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e 234 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|.. +.+.++.. +..|++++++..+
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence 46789999999999999999999999999999999999976 55554433 5667787777665
No 129
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.91 E-value=1.9e-08 Score=77.67 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=56.2
Q ss_pred cEEEEeCCC-------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHH
Q 024578 112 RKIIFTNAD-------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184 (265)
Q Consensus 112 ~~~i~s~~~-------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 184 (265)
++.|+||+. ...++..-+.+|+. .+.... .|| ..++.+++
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~~---------------------------kKP--~~~~~i~~ 125 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHRA---------------------------KKP--GCFREILK 125 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeCC---------------------------CCC--ccHHHHHH
Confidence 689999983 55666677777743 222211 266 55566666
Q ss_pred HcCC-----CCCcEEEEcCCh-hcHHHHHHcCceEEEECCCC
Q 024578 185 IANV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 185 ~lg~-----~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~ 220 (265)
.++. +|+++++|||.. +|+.++...|+.++++..|.
T Consensus 126 ~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 126 YFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 6654 599999999999 79999999999999998763
No 130
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.84 E-value=2.6e-08 Score=83.71 Aligned_cols=72 Identities=19% Similarity=0.243 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc----CceEEEECCCCCCCCCCceecCHhHHHHHHHHHhcCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a----G~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
+..|..+++++++.+|++.+++++|||+.||..|.+.+ |. ++.+.++ ...|.+.+++.+++..+|..+....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~-~vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~~ 247 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGI-SVKVGTG--ATQASWRLAGVPDVWSWLEMITTAQ 247 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCe-EEEECCC--CCcCeEeCCCHHHHHHHHHHHHHhh
Confidence 46889999999999999999999999999999999988 54 5555544 4668899999999999999987543
No 131
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.83 E-value=9e-09 Score=82.24 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=70.7
Q ss_pred HHHHHHHhccccCCCCCCChhHHHHHhcCC---CcEEEEeCCChh-------HHHHHHhHh-CCccccceeeecCCCCCC
Q 024578 81 DEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQK-------HAMEVLGRL-GLEDCFEGIICFETINPR 149 (265)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~---~~~~i~s~~~~~-------~~~~~l~~~-~~~~~fd~i~~~~~~~~~ 149 (265)
+.+...+.+.-.+..++|+||+.+++++|. ..++++|+.... .....++++ +. ..++.++.+.+
T Consensus 57 ~~~~~~~~~~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---- 131 (191)
T PF06941_consen 57 EKLWRFYEEPGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---- 131 (191)
T ss_dssp HHHHHHHTSTTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS----
T ss_pred HHHHHHHhChhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC----
Confidence 344455555444678999999999999983 356666654432 344555554 32 12334333221
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCC-CCce
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-ADHA 228 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~-a~~~ 228 (265)
|. .++.+ ++|+|++..+..+...|+..+++..+.+... .-..
T Consensus 132 -----------------------K~----------~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~R 174 (191)
T PF06941_consen 132 -----------------------KT----------LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPR 174 (191)
T ss_dssp -----------------------GG----------GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEE
T ss_pred -----------------------CC----------eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCcc
Confidence 31 12222 8999999999999999999999987766333 4779
Q ss_pred ecCHhHHHHHHHH
Q 024578 229 LNSIHNIKEAIPE 241 (265)
Q Consensus 229 v~~~~el~~~l~~ 241 (265)
+.+++|+.+.+-.
T Consensus 175 v~~W~ei~~~i~~ 187 (191)
T PF06941_consen 175 VNNWEEIEDLILS 187 (191)
T ss_dssp E-STTSHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 9999999988743
No 132
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.80 E-value=5e-09 Score=80.99 Aligned_cols=89 Identities=20% Similarity=0.310 Sum_probs=57.4
Q ss_pred hhHHHHHhcC---CCcEEEEeCCC---h-----------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 100 PVLRNLLLSM---PQRKIIFTNAD---Q-----------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~---~-----------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
|++.+.|+.+ +++++|+||.. . ..+..+++.+++. + .++++.....
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d~-------------- 94 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKDP-------------- 94 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSST--------------
T ss_pred hhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCCC--------------
Confidence 4566666665 78999999852 1 2234455556554 2 3333332222
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC----CCCCcEEEEcCC-----------hhcHHHHHHcCceE
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDS-----------ARNIASAKAAGLHT 213 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg----~~~~~~i~vGD~-----------~~Di~~a~~aG~~~ 213 (265)
.+||++-+++.+++.++ ++.++++||||. -.|..-|.++|+.+
T Consensus 95 --------~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 95 --------CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp --------TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred --------CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 25999999999999987 499999999996 46899999999864
No 133
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.76 E-value=2.5e-08 Score=91.88 Aligned_cols=112 Identities=16% Similarity=0.251 Sum_probs=84.4
Q ss_pred CCCCChhHHHHHhcC---CC-cEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---PQ-RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~-~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.-.++||+.+.++.| |. +++++|+.+...++..++++|+..+|..+..
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p---------------------------- 411 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP---------------------------- 411 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc----------------------------
Confidence 346789999998888 57 8999999999999999999999776643211
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
.+|.. ++++++...++++||||+.||+.+++++|+...+-..+.. ...+|.++ +++.+|.+.+.
T Consensus 412 --~~K~~----~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 412 --EDKLE----IVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred --HHHHH----HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHH
Confidence 33444 4555555568999999999999999999974444322222 55789988 88998877553
No 134
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.72 E-value=3.8e-08 Score=91.21 Aligned_cols=110 Identities=14% Similarity=0.241 Sum_probs=82.3
Q ss_pred CCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
+..++||+.+.++.| + .+++++|+.+...++..++++|+.++|..+..
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p---------------------------- 433 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP---------------------------- 433 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH----------------------------
Confidence 357789999998887 6 78999999999999999999999766654311
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
++|.+. +++++..+++++||||+.||+.+++++|+...+- ++.. ...+|+++. ++..+.+++
T Consensus 434 --~~K~~~----v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 434 --EDKLAI----VKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred --HHHHHH----HHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 334444 4444446779999999999999999999654443 2222 457888887 677766654
No 135
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.72 E-value=5e-08 Score=81.31 Aligned_cols=104 Identities=18% Similarity=0.201 Sum_probs=69.8
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc-----cCcCCcCcc-c
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE-----NNSFSSNQR-I 170 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~ 170 (265)
||+.++|+.| |.+++|+|++....+...++.+|+..+|+.++++++.......+...|-.+ ..++..... .
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~ 228 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDG 228 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCC
Confidence 6666666666 688999999999999999999999999999999987765432222223333 222222221 1
Q ss_pred CCCCC-HHHHHHHHHHcCCCC-CcEEEEcCCh-hcH
Q 024578 171 LCKPS-LEAIETAIRIANVDP-KKTIFFDDSA-RNI 203 (265)
Q Consensus 171 ~~kp~-~~~~~~~~~~lg~~~-~~~i~vGD~~-~Di 203 (265)
-.-|| |..+...+++.|+.- +.+-.|+|=. ||+
T Consensus 229 ~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 229 KRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred CcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 12244 577778888999853 4556677766 554
No 136
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.62 E-value=1.7e-07 Score=86.56 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCChhcHHHHHHcCceEEEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFF--DDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~v--GD~~~Di~~a~~aG~~~i~~ 216 (265)
+-.|..+++.+++.++++.++++.| ||+.||+.|.+.+|+.+++-
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~ 657 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQ 657 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEc
Confidence 4688999999999999999999999 99999999999999866653
No 137
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.62 E-value=3.4e-07 Score=76.52 Aligned_cols=104 Identities=18% Similarity=0.213 Sum_probs=68.1
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc-----cCcCCcCcc-c
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE-----NNSFSSNQR-I 170 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~ 170 (265)
|++.++|+.| |.+++|+|++....+...++.+|+..+|+.++++++......-+...|-.+ ..++..... .
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~ 230 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDV 230 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcc
Confidence 4555555555 689999999999999999999999999999999987654321112222222 222222221 1
Q ss_pred CCCCC-HHHHHHHHHHcCCC-CCcEEEEcCCh-hcH
Q 024578 171 LCKPS-LEAIETAIRIANVD-PKKTIFFDDSA-RNI 203 (265)
Q Consensus 171 ~~kp~-~~~~~~~~~~lg~~-~~~~i~vGD~~-~Di 203 (265)
-.-|| |..+...+++.|+. .+.+-.|+|=. ||+
T Consensus 231 ~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 231 KNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 12344 57777889999985 34566677766 555
No 138
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.60 E-value=2.8e-08 Score=77.15 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=80.3
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
+...||+.++|+.+. +.++|.|++...+++.+++.++... +|+.+++.+.....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~----------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT----------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe-----------------------
Confidence 466799999999984 7899999999999999999999775 88999887754432
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
+|+ +.+.++.+|.+++++++|||+..|+.++.+.|+.+....
T Consensus 98 ~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 98 NGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred CCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 444 556788889999999999999999999999988766554
No 139
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.58 E-value=1.9e-07 Score=76.54 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~--~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
+-.|+.+++.+++.+++ +++++++|||+.||+.|.+.+|+..+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 46778899999999876 67799999999999999999998654
No 140
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.58 E-value=1.8e-06 Score=72.29 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHcCCC--CCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 173 KPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~--~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
-+|..+++.+.+.+.-. +-.++.+|||+||+.|...+.+.. .+.+.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~v-vi~~~ 254 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKV-VLPSP 254 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeE-EecCC
Confidence 57888999998887653 448999999999999999999754 44443
No 141
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.57 E-value=5.6e-07 Score=65.26 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=89.6
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
-.+++.+.+.++.|. ..++|.|+.....+.+.++..|+. .+.++..
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~------------------------------ 76 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFAG------------------------------ 76 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeecc------------------------------
Confidence 356677777777774 788999999999999999999876 4454442
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~~~l~~~ 242 (265)
.+++.-..+++.++-+-+.|+||||+.||+.+.+++....+-+..... -..||+++.+..|+.+++...
T Consensus 77 a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 235566788888887779999999999999999999887666654332 356999999999999887654
No 142
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.56 E-value=3.1e-07 Score=85.16 Aligned_cols=108 Identities=16% Similarity=0.216 Sum_probs=79.2
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.++.|++.++++.+ +++++++|+.+...++..++.+|++ ++ ++. . .
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~-~~~-~------------------------p 452 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VR-AEV-L------------------------P 452 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EE-ccC-C------------------------h
Confidence 46789998888777 5889999999999999999999984 22 111 0 1
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
++|.+.++.+. .++++|+||||+.||+.+++++|+...+- ++.. ...+|+++. ++.+|.+++
T Consensus 453 ~~K~~~v~~l~----~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 453 DDKAALIKELQ----EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred HHHHHHHHHHH----HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 44555554443 36789999999999999999999854433 3322 557888884 777777655
No 143
>PLN02382 probable sucrose-phosphatase
Probab=98.53 E-value=1.1e-06 Score=78.25 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=55.4
Q ss_pred CCCCHHHHHHHHHHc---CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CC--------CCCceec---CHhHH
Q 024578 172 CKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VP--------PADHALN---SIHNI 235 (265)
Q Consensus 172 ~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~--------~a~~~v~---~~~el 235 (265)
+-.|..+++.+++++ |++++++++|||+.||++|.+.+|...+.+.+... +. .++++.. .-+.+
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 467899999999999 99999999999999999999999954566655543 11 2233322 34568
Q ss_pred HHHHHHHhcC
Q 024578 236 KEAIPEIWEG 245 (265)
Q Consensus 236 ~~~l~~~~~~ 245 (265)
.+.|.++.-.
T Consensus 253 ~~al~~f~l~ 262 (413)
T PLN02382 253 IQAIGHFNLG 262 (413)
T ss_pred HHHHHHhCCC
Confidence 8888877644
No 144
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.51 E-value=4.9e-07 Score=88.08 Aligned_cols=137 Identities=16% Similarity=0.207 Sum_probs=98.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+....+.+|+...++.++++.+....+. ..-.-...+..+.+.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~-------~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDD-------QQLSQIVPKVAVFAR 600 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCH-------HHHHHHhhcCeEEEE
Confidence 6678999888877 689999999999999999999999877777766654432100 000001122234456
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
..|+--..+++.++-..+.+.|+||+.||..+++.|+++..+-..+.. +..+|+++ +++..+...+.
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 777777778887776778999999999999999999986554222322 56789999 56888877654
No 145
>PLN02423 phosphomannomutase
Probab=98.40 E-value=4.7e-06 Score=69.18 Aligned_cols=54 Identities=11% Similarity=0.089 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..+++.++ +++++++||| +.||++|.+.-|+.++- |++++|+.+.+.+++
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~-------------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHT-------------VTSPDDTREQCTALF 244 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEE-------------eCCHHHHHHHHHHhc
Confidence 567788888888 8999999999 79999999887876654 455677777777664
No 146
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.38 E-value=2.5e-07 Score=76.94 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+-.|..+++++++++++++++++++|||.||+.|. ..+...+.|.+..
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 35679999999999999999999999999999999 6667888887753
No 147
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.38 E-value=1.5e-06 Score=72.18 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc-------CceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a-------G~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
-.|+..++.++++++++++++++|||+.||+.|++.+ |..++.+..+..+..|++++++.+++.++|..+.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 4567999999999999999999999999999999999 6677778767777889999999999999987764
No 148
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.35 E-value=1.6e-05 Score=72.22 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=61.8
Q ss_pred CChhHHHHHhcCCCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCH
Q 024578 98 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176 (265)
Q Consensus 98 ~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 176 (265)
+.|...+.++..+.. +|+|......++..++. +| +|.+++.+.... .++-+.+......++.|.-|.
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LG----id~VIgTeLev~-------~~G~~TG~i~g~~~c~Ge~Kv 178 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLG----ADKVLGTELEVS-------KSGRATGFMKKPGVLVGDHKR 178 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCC----CCEEEecccEEC-------cCCEEeeeecCCCCCccHHHH
Confidence 667788888777654 99999999999999976 66 456666552110 011111111111122333344
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 213 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~ 213 (265)
..++ +.+|.+... ++.|||.+|..+...|+-..
T Consensus 179 ~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 179 DAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred HHHH---HHhCCCCce-EEEECCccHHHHHHhCCccE
Confidence 4443 556654444 89999999999999998543
No 149
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.34 E-value=2.2e-06 Score=83.26 Aligned_cols=110 Identities=13% Similarity=0.199 Sum_probs=80.6
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
-++.|++.+.++.+ +++++++|+.+....+..++.+|+..+|..+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-------------------------------- 696 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-------------------------------- 696 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------
Confidence 35678988888777 5889999999999999999999987544321
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCc--eecCHhHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH--ALNSIHNIKEAIP 240 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~--~v~~~~el~~~l~ 240 (265)
.| +.-..++++++..+++++||||+.||+.+++++|+..++- ++.. ...+|. ..+++.+|..++.
T Consensus 697 ~p--~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 697 LP--DGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred CH--HHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 11 1223466667777889999999999999999999955444 3322 334454 4467888877765
No 150
>PTZ00174 phosphomannomutase; Provisional
Probab=98.33 E-value=3.4e-07 Score=76.16 Aligned_cols=44 Identities=11% Similarity=-0.045 Sum_probs=37.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~ 218 (265)
.+-.|..+++.+++. ++++++||| +.||++|.+.++.....+.+
T Consensus 185 ~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 185 KGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred CCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 367889999999998 599999999 89999999988776566654
No 151
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.29 E-value=8.7e-06 Score=66.22 Aligned_cols=98 Identities=10% Similarity=0.061 Sum_probs=63.7
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
.+.++.|++.++++.+ |.+++++|+.+... +...|...|+..+ +.++....-..
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~------------------- 176 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS------------------- 176 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC-------------------
Confidence 4557899999998876 68999999998766 6677777786643 55555431111
Q ss_pred cccCCCC----CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKP----SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp----~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
+++ |.+..+++.+ -|. .=+..|||..+|+.+. .+|.+++-++++
T Consensus 177 ----~~~~~~yKs~~R~~l~~-~GY--rIv~~iGDq~sDl~G~-~~~~RtFKLPNP 224 (229)
T TIGR01675 177 ----NKTVVTYKSEVRKSLME-EGY--RIWGNIGDQWSDLLGS-PPGRRTFKLPNP 224 (229)
T ss_pred ----CchHhHHHHHHHHHHHh-CCc--eEEEEECCChHHhcCC-CccCceeeCCCC
Confidence 122 3344444443 233 2368899999999653 666666666554
No 152
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.13 E-value=7.5e-06 Score=59.48 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=60.8
Q ss_pred CCCCCChhHHHHHhcCCCc---EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSMPQR---KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~~~---~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++|.+.++++.++.. +..+|=+....+.+.|+.+++..+|+.++.-+.-
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePhP------------------------ 93 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPHP------------------------ 93 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCCC------------------------
Confidence 3467899999999998644 4455556677788899999999999998763311
Q ss_pred CCCCCHHHHHHHHHHc------CCCCCcEEEEcCChhcHHHH
Q 024578 171 LCKPSLEAIETAIRIA------NVDPKKTIFFDDSARNIASA 206 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~l------g~~~~~~i~vGD~~~Di~~a 206 (265)
-|..++-++++.. .+.|.+++|++|..--+.-.
T Consensus 94 ---~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~I 132 (164)
T COG4996 94 ---YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNI 132 (164)
T ss_pred ---hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHH
Confidence 1134555555443 46899999999998544333
No 153
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.13 E-value=3.1e-06 Score=69.46 Aligned_cols=99 Identities=11% Similarity=0.058 Sum_probs=59.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChh---HHHHHHhHhCCccccceeeecCCCC-CCCCCCCCCCCcccCcCCcCcc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFETIN-PRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l~~~~~~~~fd~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
.++|++.++++.+ |..++++|+.+.. ....-|...|...+ +.++....-. .. .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr~~~~~~~------------~------- 174 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILRPDKDPSK------------K------- 174 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEEEESSTSS--------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhcccccccccc------------c-------
Confidence 6788899888766 7999999997655 45556777786543 4544333211 10 0
Q ss_pred cCCCCCHHHHHHHHHH-cCCCCCcEEEEcCChhcHHHHHHc---CceEEEECCC
Q 024578 170 ILCKPSLEAIETAIRI-ANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGSS 219 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~a---G~~~i~~~~~ 219 (265)
....-|.+-.+.+.++ +.+ +++|||..+|+..++.. |-+.+.++++
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPNp 224 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTAGARAERWFKLPNP 224 (229)
T ss_dssp -----SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHHHHHHTTEEE-TTS
T ss_pred cccccchHHHHHHHHcCCcE----EEEeCCCHHHhhcccccccccceEEEcCCC
Confidence 0001245555555555 444 89999999999884433 3456666553
No 154
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.10 E-value=1.9e-05 Score=77.39 Aligned_cols=136 Identities=12% Similarity=0.136 Sum_probs=89.4
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc----cceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC----FEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~----fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
++.|++.+.++.+ +++++++|+.....+....+.+|+... ....+.+.+.... +.......+.+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~-------~~~~~~~~~~~~~ 609 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM-------GPAKQRAACRSAV 609 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC-------CHHHHHHhhhcCe
Confidence 4568888887776 699999999999999999999998531 1122332221110 0000001112222
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIP 240 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l~ 240 (265)
+.++..|+--.++++.++-..+.+.|+||+.||+.+.+.|+++..+- ++.. +..+|+++.+ +..+.+.+.
T Consensus 610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 33455565556777777766788899999999999999999965543 4432 5679999987 777777653
No 155
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.05 E-value=0.00044 Score=57.54 Aligned_cols=116 Identities=21% Similarity=0.182 Sum_probs=70.6
Q ss_pred hhHHHHHhcCCCcEEEEeCCChhHHHH---HHhHhCCccccceee-ecCCCC--CCCCCCCCCCCcccCc-CCcCcccCC
Q 024578 100 PVLRNLLLSMPQRKIIFTNADQKHAME---VLGRLGLEDCFEGII-CFETIN--PRLQPADNTDGIENNS-FSSNQRILC 172 (265)
Q Consensus 100 p~~~~~l~~l~~~~~i~s~~~~~~~~~---~l~~~~~~~~fd~i~-~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 172 (265)
|.+.+.++.-+.+++.+|......... .|+.+|++ |+... ..+..- ....+...-.+.+..| .+ +-+
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf----t~~ 160 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILF----TGG 160 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEE----eCC
Confidence 445555555578899999887665554 44455655 33321 111100 0000111222223222 22 225
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHH----cCceEEEECCCCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA----AGLHTVIVGSSVP 221 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG~~~i~~~~~~~ 221 (265)
-+|++++..++.+.|..|+.++||+|+..++....+ .|+.+.++.+...
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 788999999999999999999999999987665444 5888888876543
No 156
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.99 E-value=3.1e-05 Score=74.17 Aligned_cols=106 Identities=18% Similarity=0.268 Sum_probs=73.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.| +++++++|+.+...++.+.+.+|+..++. .. + .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~~--p-----------------------~ 616 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------LL--P-----------------------E 616 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------CC--H-----------------------H
Confidence 6678999988777 68999999999999999999999852221 00 0 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l 239 (265)
-|+..+ ++++ .++.++||||+.||..+++.+++..++- ++.. ...+|.++ +++..|.+.+
T Consensus 617 ~K~~~v----~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 617 DKVKAV----TELN-QHAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred HHHHHH----HHHh-cCCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 234444 4444 3468999999999999999999766554 3322 34566655 4565655443
No 157
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.96 E-value=0.00015 Score=55.97 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=57.8
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCChhHHH---HHHhHh---CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~~~~~---~~l~~~---~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
.|++.++++++ +.+++++|+.+..... ..+..+ +..-....++++...... ...+..
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~---------~~~~e~----- 94 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFA---------ALHREV----- 94 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchh---------hhhccc-----
Confidence 46777777665 5889999999877764 566662 211112345554421110 000000
Q ss_pred cCCCC---CHHHHHHHHHHcCCCCCcE-EEEcCChhcHHHHHHcCce
Q 024578 170 ILCKP---SLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 170 ~~~kp---~~~~~~~~~~~lg~~~~~~-i~vGD~~~Di~~a~~aG~~ 212 (265)
...+| |.+.++.+.+.+.-..-.. ..+||+.+|+.+=+++|+.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11234 5667777777664222233 4588889999999999983
No 158
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.90 E-value=9e-05 Score=59.76 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=61.7
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhH----HHHHHhHhCCcccc-ceeeecCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKH----AMEVLGRLGLEDCF-EGIICFETINPR 149 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~----~~~~l~~~~~~~~f-d~i~~~~~~~~~ 149 (265)
+.++.+...... ....+.||+.+++... |.+++.+||...+. ...-|++.|+.... ++++.-.+
T Consensus 107 f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~---- 178 (274)
T COG2503 107 FTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD---- 178 (274)
T ss_pred CCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC----
Confidence 334444444433 4568999999999987 58899999987665 44566667766433 33333221
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHH
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 205 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~ 205 (265)
.|+|..-.+.+-+.+ +-++.|||+..|+..
T Consensus 179 ----------------------~k~Ke~R~~~v~k~~----~iVm~vGDNl~DF~d 208 (274)
T COG2503 179 ----------------------KKSKEVRRQAVEKDY----KIVMLVGDNLDDFGD 208 (274)
T ss_pred ----------------------CCcHHHHHHHHhhcc----ceeeEecCchhhhcc
Confidence 267776666666544 458999999988643
No 159
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.89 E-value=4.4e-05 Score=68.36 Aligned_cols=122 Identities=19% Similarity=0.207 Sum_probs=65.6
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C--------CccccceeeecCC---CCCCCCCCCCCCCcc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G--------LEDCFEGIICFET---INPRLQPADNTDGIE 160 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~--------~~~~fd~i~~~~~---~~~~~~~~~~~~~~~ 160 (265)
+...|.+..+|+.+ |.+++++||.+...+...+..+ | ..++||.|++... .-....+-+.++...
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 44567888887776 5789999999999999888864 2 3478999988531 000000111111111
Q ss_pred cCcCCcC-cccCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHc-CceEEEEC
Q 024578 161 NNSFSSN-QRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA-GLHTVIVG 217 (265)
Q Consensus 161 ~~~~~~~-~~~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~a-G~~~i~~~ 217 (265)
....... ...+.+.+ .--...+.+.+|....+++||||+. .||...+.. ||+++++-
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 1111110 00111110 1234466777888889999999999 697766665 99999884
No 160
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.87 E-value=9.2e-05 Score=56.24 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=74.0
Q ss_pred ChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCc-cccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 99 DPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 99 ~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~-~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
..++...|..++ .+++.+|.......+..-..+... ..++++...+..+ |
T Consensus 74 ~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~h~-------------------------K-- 126 (194)
T COG5663 74 AQLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGLHH-------------------------K-- 126 (194)
T ss_pred HHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcccc-------------------------c--
Confidence 345666666663 677888877666555444444322 2355544333221 2
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCCCC---CCCceecCHhHHHHHHHHHhcCC
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVP---PADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~~~---~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
-.+++...++ +++.|+. |-.+.|+++|+..+.+++..+.. .+-..+.++.+-.+.+...++++
T Consensus 127 ----V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~kR~ 193 (194)
T COG5663 127 ----VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLKRS 193 (194)
T ss_pred ----chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhccC
Confidence 2467778886 6999999 56888888999999999877633 23345678888888888777654
No 161
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.80 E-value=0.00018 Score=51.18 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=30.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~ 144 (265)
.++||+.++++.+ +.+++++||++... ....|+.+|+.-..+.|+++.
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG 67 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence 4677888877766 68899999986443 445567788775556676654
No 162
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.80 E-value=0.0004 Score=57.68 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=60.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...++.|++.++.+.+ |.+++++|+.+... ...-|...|...+ +.++..+.-... ..
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~-----------~~----- 204 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNS-----------AE----- 204 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCc-----------cc-----
Confidence 4567889999988776 68999999997654 4455556676543 555554321110 00
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
...+-|....+++.+ -|. .=+..|||..+|+.+....+-+++-++++
T Consensus 205 --~av~yKs~~R~~li~-eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 205 --NAVEYKTAARAKLIQ-EGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred --hhHHHHHHHHHHHHH-cCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 000122333333332 333 23688999999996554223466666655
No 163
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.78 E-value=2.5e-05 Score=62.84 Aligned_cols=43 Identities=19% Similarity=0.198 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 5899999999999999999999999999999999999998765
No 164
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.75 E-value=0.00017 Score=67.86 Aligned_cols=108 Identities=11% Similarity=0.080 Sum_probs=77.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.+++| |++++++|+.+...+....+.+|+.++| + .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~----A------------------------------~ 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFV----A------------------------------E 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEE----c------------------------------C
Confidence 5668888888777 6899999999999999999999986432 1 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l 239 (265)
-.|+--.++++.++-.-+.+.|+||+.||..+.+.|.++.++- +|.. +..+|.+. +++..|.+.+
T Consensus 487 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 487 CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 1234444555555544567999999999999999999876655 4432 56677766 3455555544
No 165
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.73 E-value=8.7e-06 Score=62.92 Aligned_cols=84 Identities=23% Similarity=0.225 Sum_probs=57.9
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCC-ccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
.+...||+.++|+.+. +.++|.|.+....+..+++.+.. ..+|+.+++.+.....
T Consensus 34 ~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~---------------------- 91 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD---------------------- 91 (159)
T ss_dssp EEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE----------------------
T ss_pred eEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc----------------------
Confidence 3456799999999884 89999999999999999999987 4678888877644221
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 204 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~ 204 (265)
+. . . .+-++.+|-+++++++|+|++.-..
T Consensus 92 -~~-~-~-~KdL~~l~~~~~~vvivDD~~~~~~ 120 (159)
T PF03031_consen 92 -KG-S-Y-IKDLSKLGRDLDNVVIVDDSPRKWA 120 (159)
T ss_dssp -TT-E-E-E--GGGSSS-GGGEEEEES-GGGGT
T ss_pred -cc-c-c-ccchHHHhhccccEEEEeCCHHHee
Confidence 10 0 0 1345555778899999999997543
No 166
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.67 E-value=0.00012 Score=56.24 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=50.5
Q ss_pred cCCCcEEEEeCCChhHHHH----HHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHH--H
Q 024578 108 SMPQRKIIFTNADQKHAME----VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE--T 181 (265)
Q Consensus 108 ~l~~~~~i~s~~~~~~~~~----~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~--~ 181 (265)
+-|..++.+|+.....+.. +.+.+.+......++.++ ||++.-+. .
T Consensus 128 ~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd----------------------------k~k~~qy~Kt~ 179 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD----------------------------KPKPGQYTKTQ 179 (237)
T ss_pred hcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC----------------------------CCCcccccccH
Confidence 3468899999876554333 333444544444455555 44443332 3
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
.+..-++ -++.|||-+||.+|+++|++.+-+-
T Consensus 180 ~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 180 WIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred HHHhcCc----eEEecCCchhhhHHHhcCccceeEE
Confidence 4555555 4899999999999999999888663
No 167
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.62 E-value=0.00032 Score=66.01 Aligned_cols=109 Identities=11% Similarity=0.127 Sum_probs=75.4
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+....+.+|++++| +.- . ..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~~--~------------------------Pe 495 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AEA--T------------------------PE 495 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cCC--C------------------------HH
Confidence 5568888888777 6899999999999999999999986432 211 0 12
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l~ 240 (265)
.|.+.++.+.+ ..+.+.|+||+.||..+.+.+++..++- .+.. +..+|.+.- ++..+.+.++
T Consensus 496 dK~~~v~~lq~----~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 496 DKIALIRQEQA----EGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHHHHHHHHHH----cCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 33445544433 3357999999999999999999876654 4332 455666653 4555555443
No 168
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.58 E-value=0.00019 Score=70.79 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=87.0
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.....+..+.+.+|+...-..++.+.+.....++ .-.....+..+++.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~-------el~~~i~~~~Vfar 651 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYE-------EMDPILPKLRVLAR 651 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHH-------HHHHHhccCeEEEE
Confidence 4557888777766 6999999999999999999999986432345554433211000 00001111122234
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCceec--CHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v~--~~~el~~~l 239 (265)
-.|+--.++.+.+.-.-+.+.|+|||.||..+.++|.++.++-.++. .+..||+++. ++..+...+
T Consensus 652 ~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 652 SSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 44554455555554445679999999999999999998766542433 2667889887 666666655
No 169
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.58 E-value=0.00056 Score=64.53 Aligned_cols=110 Identities=11% Similarity=0.164 Sum_probs=78.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.| |++++++|+.+...+....+.+|++++ ++ .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A------------------------------~ 490 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LA------------------------------E 490 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----Ec------------------------------c
Confidence 4568888887777 689999999999999999999998642 22 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIPE 241 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l~~ 241 (265)
-.|+--.+++++++-.-+-+.|+||+.||..+.+.|.++.++- +|.. +..+|.+.- ++..|.+.++.
T Consensus 491 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~ 561 (679)
T PRK01122 491 ATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEI 561 (679)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHH
Confidence 1233333445555444466999999999999999999876665 4433 566777664 46666665543
No 170
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.54 E-value=0.00027 Score=68.97 Aligned_cols=133 Identities=11% Similarity=0.134 Sum_probs=84.0
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+....+.+|+.. +.++.+.+....+. ..-.....+..++..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~-------~el~~~~~~~~vfAr 585 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSD-------EELARELRKYHIFAR 585 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCH-------HHHHHHhhhCeEEEE
Confidence 4557888877776 68999999999999999999999852 23444433221100 000001111122234
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
-.|+--.++.+.+.-.-+.+.|+||+.||..+.+.|.++.++. ++.. +..+|.++- ++..+...+
T Consensus 586 ~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 586 LTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHH
Confidence 4455555555555545567999999999999999999976655 4432 667888774 455554444
No 171
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.53 E-value=0.00026 Score=70.27 Aligned_cols=136 Identities=11% Similarity=0.040 Sum_probs=85.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc----------ceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF----------EGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f----------d~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
++.|++.+.++.+ |++++++|+.....+..+.+.+|+.... ..++++.+...... ..-.-
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~-------~~l~~ 718 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD-------EEVDD 718 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCH-------HHHHH
Confidence 4567777777766 6999999999999999999999985321 13444433221100 00000
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCceecC--HhHHHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v~~--~~el~~~l 239 (265)
......+++.-.|+--..+.+.+.-..+.+.|+||+.||..+.+.|.++.++-.++. .+..+|+++.+ +..+...+
T Consensus 719 ~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 719 LKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred HhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 011112333445555555566555455679999999999999999998766532333 26678888865 66666654
No 172
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.49 E-value=0.00029 Score=68.90 Aligned_cols=133 Identities=16% Similarity=0.179 Sum_probs=86.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+|.|++.+.++.| |++++++|+.+...+..+.+.+|+.. +.++++.+....+ -..-.....+..++.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~-------~~el~~~~~~~~VfAr 620 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLS-------DDELANLAERTTLFAR 620 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCC-------HHHHHHHHhhCcEEEE
Confidence 4457888877766 68999999999999999999999852 3455554432110 0000001111122334
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
-.|+--.++.+.+.-..+.+.|+||+.||..+.+.|.++.++- ++.. +..+|.++- ++..+.+.+
T Consensus 621 ~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 621 LTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHH
Confidence 5565556666666555577999999999999999999876665 4432 677888874 455555444
No 173
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.49 E-value=0.00046 Score=65.30 Aligned_cols=109 Identities=17% Similarity=0.301 Sum_probs=74.8
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|+..+.++.| |++++++|+.+....+.+.+.+|+++++-.+.. .
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP------------------------------e 586 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP------------------------------E 586 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc------------------------------H
Confidence 5567777776666 688999999999999999999998655433221 2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-CCCCCCCceecC--HhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-VPVPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~~~~~a~~~v~~--~~el~~~l 239 (265)
-|.+.+ +++.-.-+.+.||||+.||-.+...+.++.++-... -....+|.++-+ +..+.+.+
T Consensus 587 dK~~~V----~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 587 DKAEIV----RELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHHHH----HHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 233444 444333367999999999999999998865555422 225567776543 55555433
No 174
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.46 E-value=0.00072 Score=66.28 Aligned_cols=134 Identities=12% Similarity=0.121 Sum_probs=87.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+.. +.++++.+....+ -..-.....+..++..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~-------~~el~~~v~~~~VfAr 620 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMD-------DAALAREVEERTVFAK 620 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCC-------HHHHHHHhhhCCEEEE
Confidence 4557888887776 68999999999999999999999852 2344444332110 0000001111123334
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
-.|+--.++.+.+.-.-+.+.|+||+.||..+.+.|.++.++- +|.. +..||.++ +++..+...+.
T Consensus 621 ~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 621 LTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred eCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHH
Confidence 5566666666666555577999999999999999999876554 4432 67788887 45665555443
No 175
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.43 E-value=0.0043 Score=49.83 Aligned_cols=149 Identities=13% Similarity=0.147 Sum_probs=82.4
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccc--cceeeecCCCCCCCCCC-----CCCCCcc-----
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPA-----DNTDGIE----- 160 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~--fd~i~~~~~~~~~~~~~-----~~~~~~~----- 160 (265)
..++.||+.+.++.++ .+-+|+|.....+++......|+... ...-..-+++..+ +.+ +.++...
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P-eeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP-EEEREELLSIIDVIASLSGE 159 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC-hHHHHHHHHhcCccccccHH
Confidence 3678999999999996 46789999989999999998886421 1111111112222 111 1222111
Q ss_pred -----------------cCcCCcCcccCCC-CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc-Cce--EEEE-CC
Q 024578 161 -----------------NNSFSSNQRILCK-PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-GLH--TVIV-GS 218 (265)
Q Consensus 161 -----------------~~~~~~~~~~~~k-p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a-G~~--~i~~-~~ 218 (265)
-+-++...-.+|- -|..+++..++.-+++. ..++||||.+|++|.+.+ |-+ .+.+ .+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~-sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDF-SAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCc-ceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1112222222222 33455555555555554 489999999999999886 222 2223 33
Q ss_pred CCCCCCCCcee--cCHhHHHHHHHHHhcC
Q 024578 219 SVPVPPADHAL--NSIHNIKEAIPEIWEG 245 (265)
Q Consensus 219 ~~~~~~a~~~v--~~~~el~~~l~~~~~~ 245 (265)
.+.-+.||..+ ++...+..+|.-+++.
T Consensus 239 eYal~eAdVAvisp~~~a~~pvielf~e~ 267 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIELFMER 267 (315)
T ss_pred cccccccceEEeccchhhhhHHHHHHHHH
Confidence 34445555544 4445555555555443
No 176
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.39 E-value=0.0011 Score=53.19 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=84.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCC-------ccccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGL-------EDCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~-------~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
+.++++..+++.. +++++|.|+++....+.++..-+- ..|||. .++.
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-----~iG~------------------ 179 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-----TIGL------------------ 179 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-----cccc------------------
Confidence 6678888888876 589999999998888777665432 233343 2222
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCC------CCceecCHhHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ADHALNSIHNIK 236 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~------a~~~v~~~~el~ 236 (265)
|-....|..+.+..|.++.+++|..|-+....+|+.+|+.+..+.++.+.+. .-.++.++..|.
T Consensus 180 ------K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~ 249 (254)
T KOG2630|consen 180 ------KVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE 249 (254)
T ss_pred ------eehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence 7778899999999999999999999999999999999999999877655211 234566666554
No 177
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.36 E-value=0.00053 Score=66.03 Aligned_cols=138 Identities=15% Similarity=0.090 Sum_probs=82.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+..+.+.+|+... ++++++.....+.+ ..+.+.-.....+..++.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRD-DLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchh-hCCHHHHHHHHHhCCEEEe
Confidence 5568888877766 689999999999999999999998642 22222221100000 0000000000111112234
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l 239 (265)
-.|+--..+.+.+.-.-+.+.|+||+.||..+.+.|.++.++- ++.. +..||.++-+ +..+...+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHH
Confidence 4455555666666555678999999999999999999876654 4432 5667776643 44444433
No 178
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.34 E-value=0.00067 Score=52.24 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=60.5
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCc-ccc-ceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~-~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.+.++||+.++|+.+. +.++|+|++....+..+++.++.. .+| +.+++.++....
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~--------------------- 114 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP--------------------- 114 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC---------------------
Confidence 4678899999999983 789999999999999999999988 478 556666543211
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARN 202 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~D 202 (265)
..| .+-..++.+.+.++.|+|++.-
T Consensus 115 ~~K-------dL~~i~~~d~~~vvivDd~~~~ 139 (156)
T TIGR02250 115 HTK-------SLLRLFPADESMVVIIDDREDV 139 (156)
T ss_pred ccc-------cHHHHcCCCcccEEEEeCCHHH
Confidence 012 1223457788999999999853
No 179
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.33 E-value=0.0006 Score=66.95 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=84.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
+|.|++.+.++.| |+++.++|+.....+....+.+|+...- +.++.+.+.....++ .---.+.+..++
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-------el~~~~~~~~Vf 619 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-------ELAELVEELSVF 619 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-------HHHHHhhhCcEE
Confidence 5667777777666 7999999999999999999999977544 336666554332000 000111122233
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN 230 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~ 230 (265)
++-.|+--.++.+.+.-.-+-+.|+|||.||..+.+.|.++..+...|.. +..+|.+..
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEee
Confidence 45556666666666655567899999999999999999998777765543 445655443
No 180
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.30 E-value=0.00067 Score=65.17 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=56.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..+++.+++ +++++.++++||+.||..|.+.++.....+..+..+..|++++++.+++.++|+.+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 4678999999998 778899999999999999999974323334334456789999999999999888775
No 181
>PLN02580 trehalose-phosphatase
Probab=97.25 E-value=0.0013 Score=57.84 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEcCChhcHHHHHH-----cCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKK---TIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~---~i~vGD~~~Di~~a~~-----aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..+++.+++.++++..+ .++|||..||..|.+. .|+ .|.+.++...-.|.+.+.+..++.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 357899999999999987663 3899999999999986 354 4566665556678999999999999998875
No 182
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.25 E-value=0.00076 Score=63.48 Aligned_cols=134 Identities=12% Similarity=0.121 Sum_probs=89.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccc----eeeecCCCCCCCCCCCCCCCcc---cCcCCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE----GIICFETINPRLQPADNTDGIE---NNSFSS 166 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd----~i~~~~~~~~~~~~~~~~~~~~---~~~~~~ 166 (265)
+|.|++.+.++.+ |+++..+|+.+...+....++.|+...-+ ..+++.+ ||-.. ..-.+.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~e----------fD~ls~~~~~~~~~ 653 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSE----------FDDLSDEELDDAVR 653 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhh----------hhcCCHHHHHHHhh
Confidence 6678888877766 79999999999999999999999654433 2333332 22222 112223
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhHHHHHHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~el~~~l~~ 241 (265)
...++.+-.|.--.++.+.|+-..+-+.|-||+.||-.+.+.|.++.++--+|.. +..+|.+..+ +++..++..
T Consensus 654 ~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~D-DnFstIvaA 729 (972)
T KOG0202|consen 654 RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLAD-DNFSTIVAA 729 (972)
T ss_pred cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEec-CcHHHHHHH
Confidence 3333334445555566666666667789999999999999999998777755543 6677877765 444444433
No 183
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.24 E-value=0.0019 Score=64.14 Aligned_cols=136 Identities=10% Similarity=0.078 Sum_probs=84.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc-cc-----------------------eeeecCCCCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC-FE-----------------------GIICFETINPR 149 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~-fd-----------------------~i~~~~~~~~~ 149 (265)
++.|++.+.++.+ |++++++|+.....+....+.+|+-.. .+ .++.+.+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 4457887777766 689999999999999999999987421 00 12222222110
Q ss_pred CCCCCCCCCcccCcCCc--CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCC
Q 024578 150 LQPADNTDGIENNSFSS--NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPA 225 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~--~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a 225 (265)
.++ .-..... ...++++-.|+--.++.+.+.-..+.+.++||+.||+.+.+.|.++.++-..|. .+..|
T Consensus 648 ~~~-------el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aA 720 (997)
T TIGR01106 648 TSE-------QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 720 (997)
T ss_pred CHH-------HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhh
Confidence 000 0000000 011344555655555666655455679999999999999999998766543333 26678
Q ss_pred CceecC--HhHHHHHH
Q 024578 226 DHALNS--IHNIKEAI 239 (265)
Q Consensus 226 ~~~v~~--~~el~~~l 239 (265)
|+++.+ +..+.+.+
T Consensus 721 DivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 721 DMILLDDNFASIVTGV 736 (997)
T ss_pred ceEEecCCHHHHHHHH
Confidence 888876 65555544
No 184
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.14 E-value=0.0021 Score=47.48 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=29.0
Q ss_pred CChhHHHHHhc---CCCcEEEEeCCChh---------------HHHHHHhHhCCccccceeeecC
Q 024578 98 PDPVLRNLLLS---MPQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 98 ~~p~~~~~l~~---l~~~~~i~s~~~~~---------------~~~~~l~~~~~~~~fd~i~~~~ 144 (265)
+.+++.+.++. .+..++++|+.+.. .+..+|.++++. +|.++.+-
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 44555666643 35778888877554 455677777766 67777654
No 185
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.01 E-value=0.0099 Score=52.94 Aligned_cols=82 Identities=20% Similarity=0.165 Sum_probs=61.3
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHH
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 185 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 185 (265)
|..-|.-++|+|-++...++.++..+. +.++.-+++... .+-.-||.+-++.++++
T Consensus 267 l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~-------------------~iNW~~K~eNirkIAkk 322 (574)
T COG3882 267 LKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVF-------------------QINWDPKAENIRKIAKK 322 (574)
T ss_pred HHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhh-------------------eecCCcchhhHHHHHHH
Confidence 344467788999999999999988874 233333322210 01137999999999999
Q ss_pred cCCCCCcEEEEcCChhcHHHHHHcCc
Q 024578 186 ANVDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 186 lg~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
+++..+.++|++|++..-+-.+.-+-
T Consensus 323 lNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 323 LNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred hCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999988888877764
No 186
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.97 E-value=0.0034 Score=50.00 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=33.0
Q ss_pred CCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 97 KPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 97 ~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
...|++.++|+.+ .+.++|.|.+...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 3568999999988 4889999999999999999988753
No 187
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.96 E-value=0.011 Score=49.19 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=62.5
Q ss_pred HHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc-----cCcCCcCc-ccCCCCC-HH
Q 024578 105 LLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE-----NNSFSSNQ-RILCKPS-LE 177 (265)
Q Consensus 105 ~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~kp~-~~ 177 (265)
-|+..+..+++=|-|+.+++...++.+++..+||.+++++............|-.+ ..++.... ...+-|| |.
T Consensus 153 ~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPr 232 (297)
T PF05152_consen 153 ELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPR 232 (297)
T ss_pred HHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCe
Confidence 34444567889999999999999999999999999999874433211111222222 22222222 1122344 67
Q ss_pred HHHHHHHHcCCCC-CcEEEEcCCh-hcH
Q 024578 178 AIETAIRIANVDP-KKTIFFDDSA-RNI 203 (265)
Q Consensus 178 ~~~~~~~~lg~~~-~~~i~vGD~~-~Di 203 (265)
.....+++.|+.. +.+-.|+|=. ||+
T Consensus 233 VVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 233 VVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 7778899999863 4556677766 555
No 188
>PLN02645 phosphoglycolate phosphatase
Probab=96.85 E-value=0.0064 Score=52.38 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=61.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHH---HHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHA---MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~---~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.++||+.++++.+ +.+++++||++.... ...++.+|+...++.|+++.
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-------------------------- 97 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-------------------------- 97 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH--------------------------
Confidence 3568888887766 688999999884443 34456778766666666543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEE
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 215 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~ 215 (265)
......++..+......++++++..+...++.+|+.++.
T Consensus 98 ------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 ------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred ------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 244456666666555568888888999999999997654
No 189
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.71 E-value=0.024 Score=45.49 Aligned_cols=42 Identities=12% Similarity=-0.001 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHcC-CCCC-cEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 175 SLEAIETAIRIAN-VDPK-KTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 175 ~~~~~~~~~~~lg-~~~~-~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
|..+.+.+++.+. ..+. -++.+|||+||+.+. +++...+.|.
T Consensus 192 Kg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~-ev~d~AfiV~ 235 (274)
T COG3769 192 KGQAANWLLETYRRLGGARTTLGLGDGPNDAPLL-EVMDYAFIVK 235 (274)
T ss_pred ccHHHHHHHHHHHhcCceeEEEecCCCCCcccHH-Hhhhhheeec
Confidence 3445555665542 2333 489999999999988 4555555554
No 190
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.68 E-value=0.01 Score=56.59 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=67.4
Q ss_pred CCChhHHHH---HhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNL---LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~---l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
.+.|++... |++++++++++|+.+...++...+..| ++.|++.- . ..
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev--~------------------------P~ 772 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV--L------------------------PE 772 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc--C------------------------ch
Confidence 344666555 455579999999999999999999998 55666532 0 12
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCcee
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHAL 229 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v 229 (265)
-|.+.++++.+. ...+.||||+.||-.+...+.++.++..... ....+|.+.
T Consensus 773 ~K~~~Ik~lq~~----~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVL 825 (951)
T KOG0207|consen 773 QKAEKIKEIQKN----GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVL 825 (951)
T ss_pred hhHHHHHHHHhc----CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEE
Confidence 234455555443 3669999999999988888877655554432 245566644
No 191
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.65 E-value=0.02 Score=57.37 Aligned_cols=144 Identities=15% Similarity=0.138 Sum_probs=83.7
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCC----------CCC---------C
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRL----------QPA---------D 154 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~----------~~~---------~ 154 (265)
++.|++.+.++.+ +++++++|+.+...+..+.+.+|+-..-+.++..+...... .+. -
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 4567777777666 69999999999999999999999853222222211000000 000 0
Q ss_pred CC---------------CCcccC---------------cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHH
Q 024578 155 NT---------------DGIENN---------------SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 204 (265)
Q Consensus 155 ~~---------------~~~~~~---------------~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~ 204 (265)
.. +..-.+ -.+.+..++.+-.|+--..+.+.+.-...-+.|+|||.||..
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 00 000000 011122344455555555666666555567999999999999
Q ss_pred HHHHcCceEEEECCCCCCCCCCcee--cCHhHHHHHHHH
Q 024578 205 SAKAAGLHTVIVGSSVPVPPADHAL--NSIHNIKEAIPE 241 (265)
Q Consensus 205 ~a~~aG~~~i~~~~~~~~~~a~~~v--~~~~el~~~l~~ 241 (265)
+.+.|.++.++... +....|+++. +++.-+..++.+
T Consensus 816 ALK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 816 ALKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred HHHhcCcceeeccc-cceeecccccCCCcHHHHHHHHHH
Confidence 99999887665433 3344566663 456656555543
No 192
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.64 E-value=0.0055 Score=59.61 Aligned_cols=74 Identities=8% Similarity=-0.020 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHH---cCCCCCcEEEEcCChhcHHHHHHcCce-----------EEEECCCCCCCCCCceecCHhHHHH
Q 024578 172 CKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAAGLH-----------TVIVGSSVPVPPADHALNSIHNIKE 237 (265)
Q Consensus 172 ~kp~~~~~~~~~~~---lg~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~~~~~~~~~~a~~~v~~~~el~~ 237 (265)
+-.|+.+++.+++. +|.+++.+++|||+.||..|.+.++-. .+.+.-|...-.|.+.+++.+|+.+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~ 839 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR 839 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence 46788999999754 689999999999999999999988621 1333334456678899999999999
Q ss_pred HHHHHhcC
Q 024578 238 AIPEIWEG 245 (265)
Q Consensus 238 ~l~~~~~~ 245 (265)
+|..+.+.
T Consensus 840 lL~~L~~~ 847 (854)
T PLN02205 840 LMQGLASV 847 (854)
T ss_pred HHHHHHhc
Confidence 99888753
No 193
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.37 E-value=0.011 Score=59.20 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=38.9
Q ss_pred CCcEEEEcCChhcHHHHHHcCceEEEECCCC---CCCCCCceecCHhHHHHHH
Q 024578 190 PKKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEAI 239 (265)
Q Consensus 190 ~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~---~~~~a~~~v~~~~el~~~l 239 (265)
...+.++|||.||+.|.++|.++. ++...+ ....+|+++.++..|.++|
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGI-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGV-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeee-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 467999999999999999998765 554433 2557999999988887766
No 194
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.26 E-value=0.011 Score=52.24 Aligned_cols=114 Identities=20% Similarity=0.204 Sum_probs=83.0
Q ss_pred hHHHHHHHhccccCCCCCCChh--HHHHHhcC---CCcEEEEeCC--ChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPV--LRNLLLSM---PQRKIIFTNA--DQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~--~~~~l~~l---~~~~~i~s~~--~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
+..+.+...-+...++..++|. ..++++.+ +.+++++|+. +...++..|..+|.+-+--.++.+.+....
T Consensus 80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~--- 156 (635)
T COG5610 80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLK--- 156 (635)
T ss_pred cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehh---
Confidence 4455554443333444445543 44566655 4788999996 455677888888876443346777766653
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEE
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIV 216 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~ 216 (265)
|.....+..+++.-+++|.+.+.|||+. .|+.+++..|+.+.+.
T Consensus 157 --------------------KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 157 --------------------KNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred --------------------cccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 8889999999999999999999999999 5999999999977654
No 195
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.11 E-value=0.032 Score=51.32 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=65.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ +.+++++|+..........+.+|+ + + .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~-----------------------------~ 389 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A-----------------------------R 389 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e-----------------------------c
Confidence 5567777776665 688999999999999999999885 1 1 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecC
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 231 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~ 231 (265)
-.|+.-..+++.+.-....+.++||+.||..+.+.+++...+. ....+|.++.+
T Consensus 390 ~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~~~adivl~~ 443 (499)
T TIGR01494 390 VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AKAAADIVLLD 443 (499)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hHHhCCeEEec
Confidence 1122222344443333367999999999999999998764443 34567887765
No 196
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=96.07 E-value=0.07 Score=48.32 Aligned_cols=97 Identities=9% Similarity=0.003 Sum_probs=55.6
Q ss_pred ChhHHHHHhcCCCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHH
Q 024578 99 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 177 (265)
Q Consensus 99 ~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 177 (265)
.|...+.....+ +.+|+|..+..+++..++. +| +|.|++.+..-. +...-.|... ++...+
T Consensus 98 ~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG----~D~VvGTEL~v~--------~~G~~TG~~~-----G~n~~e 159 (498)
T PLN02499 98 DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLR----ADEVIGSELVVN--------RFGFATGFIR-----GTDVDQ 159 (498)
T ss_pred CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcC----CceEEeeeEEEe--------eccEEEEEEe-----cCccHH
Confidence 355667777766 9999999999999999998 65 455554431100 0000111111 233333
Q ss_pred H-HHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 178 A-IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 178 ~-~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
. .+.+.+.+| +....+-+||+..|-.-..-+. -.++
T Consensus 160 k~~~rl~~~~g-~~~~~vg~~~~~~~~~f~~~ck--~~~~ 196 (498)
T PLN02499 160 SVANRVANLFV-DERPQLGLGRISASSSFLSLCK--EQIH 196 (498)
T ss_pred HHHHHHHHHhC-ccCceecccCCcccchhhhhCc--eEEe
Confidence 3 445555566 3345788888887755555443 4444
No 197
>PLN03190 aminophospholipid translocase; Provisional
Probab=96.00 E-value=0.019 Score=57.84 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=39.9
Q ss_pred CcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHHHHH
Q 024578 191 KKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 191 ~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~~l~ 240 (265)
.-+++||||.||+.|.++|.++. ++...+. ...+|+.+..+.-|.++|-
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 56899999999999999998754 6554442 5679999999999888764
No 198
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=95.98 E-value=0.05 Score=44.39 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=60.3
Q ss_pred EEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCC
Q 024578 114 IIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191 (265)
Q Consensus 114 ~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 191 (265)
++||++..--....+-.++++..| +.|+++.. ..|...++++.+++|-+.-
T Consensus 179 vLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~k---------------------------vGK~~cFe~I~~Rfg~p~~ 231 (274)
T TIGR01658 179 VLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIK---------------------------VGKLQCFKWIKERFGHPKV 231 (274)
T ss_pred EEEEcCccHHHHHHHHHhccCCccccccccchhh---------------------------cchHHHHHHHHHHhCCCCc
Confidence 577777655444444455666555 55666654 3458899999999999788
Q ss_pred cEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 192 KTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 192 ~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
..++|||+...=.+|+..+|.++-++..
T Consensus 232 ~f~~IGDG~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 232 RFCAIGDGWEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred eEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence 9999999999999999999999888654
No 199
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.83 E-value=0.031 Score=46.00 Aligned_cols=116 Identities=13% Similarity=0.066 Sum_probs=59.5
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
..+.+.+...+ ..+.+.+|+.++++.| ++|+.|+|.|-...++.++++.+....=-.|+++.-.
T Consensus 76 ~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~--------- 142 (246)
T PF05822_consen 76 TKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMD--------- 142 (246)
T ss_dssp BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EE---------
T ss_pred CHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEE---------
Confidence 35566666654 4567888888888777 5899999999999999999998644221223433211
Q ss_pred CCCcc--cCcCCcCcccCCCCCHHHHH--HHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 156 TDGIE--NNSFSSNQRILCKPSLEAIE--TAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 156 ~~~~~--~~~~~~~~~~~~kp~~~~~~--~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
||-.+ .++.-+-++...|... .+. ...+.+. ...+++..||+..|+.|+..+
T Consensus 143 Fd~~g~l~gF~~~lIH~~NKn~~-~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 143 FDEDGVLVGFKGPLIHTFNKNES-ALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp E-TTSBEEEE-SS---TT-HHHH-HHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred ECCcceEeecCCCceEEeeCCcc-cccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence 11100 1111111122233322 221 1122222 457899999999999998766
No 200
>PLN03017 trehalose-phosphatase
Probab=95.21 E-value=0.12 Score=45.25 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHcCCCC---CcEEEEcCChhcHHHHHHcC----ceEEEECCCCCCCCCCceecCHhHHHHHHHHHhc
Q 024578 173 KPSLEAIETAIRIANVDP---KKTIFFDDSARNIASAKAAG----LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~---~~~i~vGD~~~Di~~a~~aG----~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
-.|+.+++.+++.++... .-.+|+||..+|-.+++.+. -..|.|......-.|.+.+.+..++.++|..+..
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 577999999999998753 35899999999977777652 2345555333456789999999999999988864
No 201
>PLN02151 trehalose-phosphatase
Probab=95.14 E-value=0.091 Score=45.79 Aligned_cols=71 Identities=17% Similarity=0.158 Sum_probs=54.6
Q ss_pred CCCHHHHHHHHHHcCCCCC---cEEEEcCChhcHHHHHHc-----CceEEEECCCCCCCCCCceecCHhHHHHHHHHHhc
Q 024578 173 KPSLEAIETAIRIANVDPK---KTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~---~~i~vGD~~~Di~~a~~a-----G~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
-.|+.+++.+++.++.... -.+|+||..+|-.+++.+ |+ .+.|..+...-.|.+.+.+.+++.++|..+..
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4679999999999886532 379999999997777654 33 34555434455799999999999999988863
No 202
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=94.70 E-value=0.061 Score=39.97 Aligned_cols=104 Identities=17% Similarity=0.236 Sum_probs=61.5
Q ss_pred CCCCCCChhHHHHHhcC--CCcEEEEeCC--ChhHHHH----HHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 93 YEKLKPDPVLRNLLLSM--PQRKIIFTNA--DQKHAME----VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 93 ~~~~~~~p~~~~~l~~l--~~~~~i~s~~--~~~~~~~----~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
+.++...|++.++++.| .+.++|+|.. ....... +.+.+..-++=..|+|+.
T Consensus 64 FRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-------------------- 123 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-------------------- 123 (180)
T ss_pred hhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC--------------------
Confidence 35677889999999998 4788888876 2222222 333333323323344443
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC-CCCCCCCCceecCHhHHHHHHHH
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS-SVPVPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~-~~~~~~a~~~v~~~~el~~~l~~ 241 (265)
|. +. .-=++|+|++..++..+ |.. +++.. ......-...+.++.|+.+.+-+
T Consensus 124 --------Kn-------iv-------kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~nenRF~Rv~~W~e~eq~ll~ 176 (180)
T COG4502 124 --------KN-------IV-------KADILIDDNPLNLENFK--GNK-ILFDAHHNKNENRFVRVRDWYEAEQALLE 176 (180)
T ss_pred --------CC-------eE-------EeeEEecCCchhhhhcc--Cce-EEEecccccCccceeeeccHHHHHHHHHH
Confidence 21 11 11268999999988875 443 34433 33344555678899988865543
No 203
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=94.67 E-value=0.093 Score=43.92 Aligned_cols=68 Identities=19% Similarity=0.159 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcC---ceEEEECCCCCCCCCCceecCHhHHHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG---LHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG---~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~ 242 (265)
..|+..++++.++.+....-+++.||...|=.++..+. -.++-+..+. -.+++...........+.++
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~--t~a~~~~~~~~~~~~~l~~~ 251 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS--TQAKFRLAGVYGFLRSLYKL 251 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc--ccccccccccHHHHHHHHHH
Confidence 45789999999998887677999999999988887775 3344444332 23333333333333333333
No 204
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.41 E-value=0.39 Score=36.80 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=23.6
Q ss_pred HHHHHHHHHcC-CCCCcEEEEcCChhcHHHHHHcCc
Q 024578 177 EAIETAIRIAN-VDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 177 ~~~~~~~~~lg-~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
..++.+...+. ....=...+|.+.+|+.+=+++|+
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 44444444443 222335668999999999999998
No 205
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=94.29 E-value=0.1 Score=49.88 Aligned_cols=137 Identities=9% Similarity=0.039 Sum_probs=83.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccc--eeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
+..||+.+.++.| |+++-.+|+.+-..++.....+|+-..=+ ..+.+.+.....+++ -.-..++..++
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee-------~~~i~pkl~Vl 719 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEE-------RDKIWPKLRVL 719 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHH-------HHhhhhhheee
Confidence 3458888888777 58888999999999999999998653222 222222222110000 11133444444
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE-cCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhHHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~v-GD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~el~~~l~~~ 242 (265)
....|.--..+.+.+. ...++++| ||+.||-.+.++|.++.++--.|-. +..+|.|+-+ +.+..+++.+
T Consensus 720 ARSSP~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~D-DNFssIVk~v 791 (1034)
T KOG0204|consen 720 ARSSPNDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILD-DNFSSIVKAV 791 (1034)
T ss_pred ecCCCchHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEc-CchHHHHHHH
Confidence 4444433333333333 33456665 9999999999999998876654433 7788888765 5555555544
No 206
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=94.04 E-value=1.6 Score=38.19 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHHc----CCCCCcEEEEcCCh-----hcHHHHHHcCceEEEECCCC
Q 024578 174 PSLEAIETAIRIA----NVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 174 p~~~~~~~~~~~l----g~~~~~~i~vGD~~-----~Di~~a~~aG~~~i~~~~~~ 220 (265)
.|..+++.+.+.+ ++.+++|+.|||.. ||++ |+.++ .++|++++.
T Consensus 349 dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 349 DKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASPQ 402 (408)
T ss_pred CcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCHH
Confidence 3467777777777 89999999999954 7775 44555 589998764
No 207
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.67 E-value=0.65 Score=39.02 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=37.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHH---HHHhH-hCCccccceeeecC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGR-LGLEDCFEGIICFE 144 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~---~~l~~-~~~~~~fd~i~~~~ 144 (265)
...+++||+.++|+.+ +.+++++||++...-+ ..|+. .+++...+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 5568899999999877 5899999998766444 44555 55656677788765
No 208
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.65 E-value=0.058 Score=43.17 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=20.8
Q ss_pred EEEEecCCCccCCc-ccHHHHHHHHHHH
Q 024578 14 CLLFDLDDTLYPLS-TGFNLACRRNIEE 40 (265)
Q Consensus 14 ~iiFDlDGTLld~~-~~~~~~~~~~~~~ 40 (265)
+++||+||||+++. ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999865 5666777776666
No 209
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=93.54 E-value=0.22 Score=46.74 Aligned_cols=128 Identities=8% Similarity=0.100 Sum_probs=73.8
Q ss_pred CChhHHHHHhcCC---CcEEEEeCCChhHHHHHHhHh--CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 98 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL--GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 98 ~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~~l~~~--~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
-..++..-|..++ ....++++.+.+......+.- .+......++++.-..
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctP------------------------- 766 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTP------------------------- 766 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecCh-------------------------
Confidence 3456666666664 334566776666655544432 1222234445433110
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHHHHHHHhcCChhh
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIPEIWEGEGEQ 249 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~~l~~~~~~~~~~ 249 (265)
.-|..+.+.+.++-| ..+.+|||+-||+.|.++|.++ +++...+. .-.||+-++.+.-+.++|.-.=-..+++
T Consensus 767 tQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkr 842 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKR 842 (1051)
T ss_pred hHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHhhccccchHHH
Confidence 223445554555545 6799999999999999988764 44433332 4568998888888887664332234455
Q ss_pred hhhhc
Q 024578 250 LEQVI 254 (265)
Q Consensus 250 ~~~~~ 254 (265)
+..+.
T Consensus 843 sa~la 847 (1051)
T KOG0210|consen 843 SAKLA 847 (1051)
T ss_pred HHHHH
Confidence 44443
No 210
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=93.38 E-value=2.2 Score=37.63 Aligned_cols=117 Identities=17% Similarity=0.105 Sum_probs=70.0
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCCCC---CCCCCCCCCcc---cCcCCcCc-ccC
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPR---LQPADNTDGIE---NNSFSSNQ-RIL 171 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~-~~~ 171 (265)
....++..|.++.+.||............+ +...+||.++....-... ...-+..+... ..+.+..+ -+.
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~ 285 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQG 285 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhc
Confidence 445556667788999998877777666653 344678887765311000 00000111111 11111111 233
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChh-c-HHHHHHcCceEEEECC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSAR-N-IASAKAAGLHTVIVGS 218 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-D-i~~a~~aG~~~i~~~~ 218 (265)
+.+.+-....+.+.++....+++++||+.. | +..-+.-|+.++.+..
T Consensus 286 ~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 286 GVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred ccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 455666777788888888899999999995 6 4556778998888753
No 211
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=93.06 E-value=0.28 Score=44.50 Aligned_cols=85 Identities=13% Similarity=0.244 Sum_probs=63.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 174 (265)
.-||+.|-+.++ +++.+.+|+.+........+..|++++... ++|
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe--------------------------------atP 495 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE--------------------------------ATP 495 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc--------------------------------CCh
Confidence 348888876665 689999999999988889889998754322 243
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 175 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
+---.++++.+-.-.-+.|.||+.||..+..++.+..++.
T Consensus 496 --EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 496 --EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred --HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 3334566666666677999999999999999998765544
No 212
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.85 E-value=0.28 Score=40.35 Aligned_cols=119 Identities=10% Similarity=0.016 Sum_probs=63.5
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHH---hcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLL---LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l---~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
+...+.+...+ ..+.+..|..+++ +...+++.|.|.+-...++.++.+-.....+-.+++..... .
T Consensus 124 ~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F-------~ 192 (298)
T KOG3128|consen 124 SKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDF-------D 192 (298)
T ss_pred CHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhh-------c
Confidence 34444444433 2333445555554 45569999999999888888877654443333333322100 0
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCC--CCCcEEEEcCChhcHHHHHHc
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~--~~~~~i~vGD~~~Di~~a~~a 209 (265)
+++--+++--+-+..+.|. ...++...+.+.. ...++++.||+..|+.|+..+
T Consensus 193 edg~l~gF~~~Lihtfnkn-~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 193 EDGNLCGFSQPLIHTFNKN-SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred ccchhhhhhHHHHHHHccc-hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 0000011111111122232 3444454555532 567899999999999998765
No 213
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=91.87 E-value=0.92 Score=38.34 Aligned_cols=84 Identities=20% Similarity=0.212 Sum_probs=50.7
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChh---HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
++||+.++|+.+ +.+++++||++.. .....++.+|+....+.++++.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~--------------------------- 71 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA--------------------------- 71 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------------------------
Confidence 566777777666 5889999997643 3335667777754444454432
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
......+++.......++++|+.. ....++..|+..+
T Consensus 72 -----~~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 72 -----LCAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred -----HHHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 233344455434456788899752 3344566777643
No 214
>PLN02580 trehalose-phosphatase
Probab=91.73 E-value=0.44 Score=42.10 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=27.3
Q ss_pred CCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhH
Q 024578 96 LKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGR 130 (265)
Q Consensus 96 ~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~ 130 (265)
..+.|++.+.|+.+ ..+++|+|+.+...+...+..
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 34567788888877 367999999999988877754
No 215
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=90.11 E-value=0.76 Score=39.67 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=65.3
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C--CccccceeeecCCCCCCCCCCC-CCCCcccC-c--CCcCcc
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G--LEDCFEGIICFETINPRLQPAD-NTDGIENN-S--FSSNQR 169 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~--~~~~fd~i~~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~ 169 (265)
|....+++.| |.+++++||.+..++..=...+ | ..+.||.|+.--+-..--++++ -|.--... + ...+..
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~ 322 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD 322 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence 5666666666 5789999999988877655543 2 2356888876321111000000 01000000 0 000000
Q ss_pred cCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHH-HcCceEEEE
Q 024578 170 ILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIV 216 (265)
Q Consensus 170 ~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~-~aG~~~i~~ 216 (265)
-+-|.| .-.+...++.-|..-.+++++||+. +|+.... ..||++..+
T Consensus 323 klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 323 KLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 001111 1234566777788889999999999 6987776 789987665
No 216
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=89.26 E-value=4.3 Score=33.75 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=49.4
Q ss_pred CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc
Q 024578 110 PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 186 (265)
Q Consensus 110 ~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l 186 (265)
.++++|||..+... +...|+.+|+. +|..+.-. |-+|.. +++.+
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg---------------------------G~~K~~----vL~~~ 232 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG---------------------------GLPKGP----VLKAF 232 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC---------------------------CCchhH----HHHhh
Confidence 47889999876554 44455566765 44444333 244444 45555
Q ss_pred CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 187 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 187 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+-. +|++|...-+..|. .++.+..|++|.
T Consensus 233 ~ph----IFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 233 RPH----IFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred CCC----EeecCchhhhhHhh-cCCCEEeccCCc
Confidence 443 89999999999997 778888888774
No 217
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=88.93 E-value=0.21 Score=47.69 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=26.9
Q ss_pred CcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 191 KKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 191 ~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
-.++|+||+.||+-+.++|.++.+..++.+
T Consensus 807 y~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 807 YVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 468999999999999999999989888765
No 218
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.72 E-value=0.54 Score=35.61 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=30.4
Q ss_pred CCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC
Q 024578 188 VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 188 ~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~ 221 (265)
.+++|++||||.. .||-+|...|--.+|...|.+
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 5899999999999 799999999999999987653
No 219
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=87.82 E-value=2.6 Score=36.88 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=55.1
Q ss_pred EEEeCCChhHHHHHHhHhCCccc--cceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCC
Q 024578 114 IIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191 (265)
Q Consensus 114 ~i~s~~~~~~~~~~l~~~~~~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 191 (265)
+++|+...-.....+-.+|+... .+.|+++..+ .|...|+++.++||- .-
T Consensus 374 VlvTttqLipalaKvLL~gLg~~fpiENIYSa~ki---------------------------GKescFerI~~RFg~-K~ 425 (468)
T KOG3107|consen 374 VLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKI---------------------------GKESCFERIQSRFGR-KV 425 (468)
T ss_pred EEEeccchhHHHHHHHHHhcCCcccchhhhhhhhc---------------------------cHHHHHHHHHHHhCC-ce
Confidence 56776654443333334455433 4667776643 447899999999997 45
Q ss_pred cEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 192 KTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 192 ~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
..+.|||+...-.+|++..|.+.-+...
T Consensus 426 ~yvvIgdG~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 426 VYVVIGDGVEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred EEEEecCcHHHHHHHHhhCCceEeeccC
Confidence 6788999999999999999988777653
No 220
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=86.93 E-value=0.84 Score=45.06 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=26.4
Q ss_pred CCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHh
Q 024578 97 KPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRL 131 (265)
Q Consensus 97 ~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~ 131 (265)
.+.|++.+.|+.| +..++|+|+.+...++.++...
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 4667777777777 3678888988888888877654
No 221
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=84.47 E-value=1.9 Score=42.19 Aligned_cols=79 Identities=6% Similarity=-0.116 Sum_probs=56.3
Q ss_pred CCCCHHHHHHHHHHc------CCCCCcEEEEcCCh-hcHHHHHHcCce------------------------------EE
Q 024578 172 CKPSLEAIETAIRIA------NVDPKKTIFFDDSA-RNIASAKAAGLH------------------------------TV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~l------g~~~~~~i~vGD~~-~Di~~a~~aG~~------------------------------~i 214 (265)
+..|+.+++.+++++ +..++=++++||.. .|=.|++..+-. ++
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 346788899999876 33567799999975 476666655421 12
Q ss_pred EECCCCCCCCCCceecCHhHHHHHHHHHhcCChhhh
Q 024578 215 IVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQL 250 (265)
Q Consensus 215 ~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~~~~~~ 250 (265)
.+.-|...-.|.+.+++..|+.++|..+.....+..
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~~~ 791 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAVANTTMT 791 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhccCcccc
Confidence 333444567899999999999999999987655443
No 222
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=83.87 E-value=1.1 Score=44.89 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=33.6
Q ss_pred CCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHH
Q 024578 189 DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKE 237 (265)
Q Consensus 189 ~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~ 237 (265)
.+..+++|||+.||+.|.+.|.++ +++...+. ...+|+.+..+.=|..
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqFrfL~r 843 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQFRFLER 843 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHHHHHhh
Confidence 446799999999999999988764 55554333 4457776666554444
No 223
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=83.49 E-value=8.8 Score=38.58 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcE-EEEcCChh-cHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKT-IFFDDSAR-NIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~-i~vGD~~~-Di~~a~~aG~~~i 214 (265)
+-.|+.+++++..++|++.+++ +++|||-| |++.. -.|.+..
T Consensus 954 ~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~t 997 (1050)
T TIGR02468 954 LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKT 997 (1050)
T ss_pred CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeE
Confidence 4678999999999999999999 55999999 98877 4455433
No 224
>PLN03017 trehalose-phosphatase
Probab=83.25 E-value=1.1 Score=39.47 Aligned_cols=28 Identities=21% Similarity=0.300 Sum_probs=19.6
Q ss_pred cEEEEecCCCcc---C-Ccc-cHHHHHHHHHHH
Q 024578 13 ECLLFDLDDTLY---P-LST-GFNLACRRNIEE 40 (265)
Q Consensus 13 k~iiFDlDGTLl---d-~~~-~~~~~~~~~~~~ 40 (265)
.+|+||+||||+ + ... .+.....+++..
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 577789999999 3 333 466667666666
No 225
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=82.85 E-value=0.68 Score=38.31 Aligned_cols=29 Identities=17% Similarity=0.207 Sum_probs=18.5
Q ss_pred ccEEEEecCCCccCCc-----ccHHHHHHHHHHH
Q 024578 12 YECLLFDLDDTLYPLS-----TGFNLACRRNIEE 40 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~-----~~~~~~~~~~~~~ 40 (265)
-++++||+||||++.. ......+.+.+..
T Consensus 3 ~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~ 36 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQK 36 (244)
T ss_pred cEEEEEecCccccCCcCCCcccCCCHHHHHHHHH
Confidence 3689999999999632 1233455555554
No 226
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=82.16 E-value=1.6 Score=34.66 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=22.4
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHH
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEE 40 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~ 40 (265)
-+++||+||||......+...+.+.+.+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 4788999999998777777777765555
No 227
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=81.85 E-value=0.87 Score=38.84 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=15.6
Q ss_pred cEEEEecCCCccCCcccHHH
Q 024578 13 ECLLFDLDDTLYPLSTGFNL 32 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~ 32 (265)
-+++||+||+|+.....+..
T Consensus 36 fgfafDIDGVL~RG~~~i~~ 55 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPG 55 (389)
T ss_pred eeEEEecccEEEecCCCCcc
Confidence 48999999999976655544
No 228
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=80.89 E-value=1.8 Score=35.50 Aligned_cols=59 Identities=15% Similarity=0.145 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHcCCC---CCcEEEEcCChhcHHHHHHcCce-----EEEECCCC---CCCCCCceecC
Q 024578 173 KPSLEAIETAIRIANVD---PKKTIFFDDSARNIASAKAAGLH-----TVIVGSSV---PVPPADHALNS 231 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~---~~~~i~vGD~~~Di~~a~~aG~~-----~i~~~~~~---~~~~a~~~v~~ 231 (265)
..|..+++.+++.++.. ++-++|+||..+|-.+.+.+.-. .+.+.... ..-.|.|.+++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 45899999999999875 78899999999998888876443 45554432 34456666554
No 229
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=80.54 E-value=0.86 Score=28.89 Aligned_cols=25 Identities=12% Similarity=0.311 Sum_probs=16.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhcHHHHH
Q 024578 179 IETAIRIANVDPKKTIFFDDSARNIASAK 207 (265)
Q Consensus 179 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~ 207 (265)
++++++++|+ .+++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5688999998 799999999998875
No 230
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=79.73 E-value=1.9 Score=41.82 Aligned_cols=30 Identities=27% Similarity=0.342 Sum_probs=20.3
Q ss_pred CccEEEEecCCCccCCc-----ccHHHHHHHHHHH
Q 024578 11 NYECLLFDLDDTLYPLS-----TGFNLACRRNIEE 40 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~-----~~~~~~~~~~~~~ 40 (265)
..++++||+||||++.. ........+++..
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~ 525 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRR 525 (726)
T ss_pred cceEEEEecCccccCCCCCcccCCCCHHHHHHHHH
Confidence 46899999999999732 1234555555555
No 231
>PRK10444 UMP phosphatase; Provisional
Probab=78.49 E-value=12 Score=31.11 Aligned_cols=47 Identities=11% Similarity=0.045 Sum_probs=32.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHH---HHHhHhCCccccceeeec
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGRLGLEDCFEGIICF 143 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~---~~l~~~~~~~~fd~i~~~ 143 (265)
.+.|++.++++.+ +.+++++||+...... ..|+.+|+.-.-+.++++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 4577888887766 6889999998776544 444556765445566665
No 232
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=77.82 E-value=2.5 Score=41.69 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=19.6
Q ss_pred CccEEEEecCCCccCCcc---cHHHHHHHHHHH
Q 024578 11 NYECLLFDLDDTLYPLST---GFNLACRRNIEE 40 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~---~~~~~~~~~~~~ 40 (265)
+.++|++|+||||++... .....+.+.+..
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~ 627 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNT 627 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHH
Confidence 578999999999996442 223344444444
No 233
>PLN02151 trehalose-phosphatase
Probab=77.55 E-value=2.1 Score=37.49 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=19.0
Q ss_pred cEEEEecCCCcc----CCcc-cHHHHHHHHHHH
Q 024578 13 ECLLFDLDDTLY----PLST-GFNLACRRNIEE 40 (265)
Q Consensus 13 k~iiFDlDGTLl----d~~~-~~~~~~~~~~~~ 40 (265)
.+++||+||||+ +... .......+++..
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~ 131 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRK 131 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHH
Confidence 478889999999 3333 445566666655
No 234
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.46 E-value=3.7 Score=34.03 Aligned_cols=47 Identities=13% Similarity=0.207 Sum_probs=34.2
Q ss_pred CChhHHHHHhcC---CCcEEEEeC---CChhHHHHHHhHhCCccccceeeecC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTN---ADQKHAMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~---~~~~~~~~~l~~~~~~~~fd~i~~~~ 144 (265)
++|++.++++.+ +.+++++|| .+.......++.+|+....+.|+++.
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 445667777655 688999998 44666777888888876667777764
No 235
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=75.92 E-value=13 Score=36.63 Aligned_cols=35 Identities=11% Similarity=0.260 Sum_probs=28.4
Q ss_pred CCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHh
Q 024578 97 KPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRL 131 (265)
Q Consensus 97 ~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~ 131 (265)
.+.|++.+.|+.| +..++|+|+.+...++.++...
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4667888888888 4678999999999988888754
No 236
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=74.99 E-value=3.4 Score=34.43 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=34.1
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~ 144 (265)
+.|++.++++.+ |.+++++||++... ....++.+|+.-..+.++++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH
Confidence 677888887776 68899999976653 666777788764456676653
No 237
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=73.94 E-value=2.3 Score=32.83 Aligned_cols=15 Identities=40% Similarity=0.629 Sum_probs=12.9
Q ss_pred cEEEEecCCCccCCc
Q 024578 13 ECLLFDLDDTLYPLS 27 (265)
Q Consensus 13 k~iiFDlDGTLld~~ 27 (265)
+.+++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 479999999999764
No 238
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=71.85 E-value=14 Score=35.98 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=65.9
Q ss_pred hhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCC-CCCCCCCCCCcccCcCCcCcccCCCCCHHH
Q 024578 100 PVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP-RLQPADNTDGIENNSFSSNQRILCKPSLEA 178 (265)
Q Consensus 100 p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 178 (265)
|.+...-+..|++++.+|+......+...+..|+-.. .-.+.+++.. ...+-...|....++.+-+-..+.--.++-
T Consensus 596 P~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~--~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~q 673 (1019)
T KOG0203|consen 596 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISE--GSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQ 673 (1019)
T ss_pred chhhhhhhhhCceEEEEecCccchhhhhhhheeeecC--CchhhhhhHHhcCCcccccCccccceEEEecccccccCHHH
Confidence 5666666666899999999887777777776663211 1111110000 000001111111111111111112234566
Q ss_pred HHHHHHHcC-C-----CCC-------------cEE-EEcCChhcHHHHHHcCceEEE-ECCCC-CCCCCCcee
Q 024578 179 IETAIRIAN-V-----DPK-------------KTI-FFDDSARNIASAKAAGLHTVI-VGSSV-PVPPADHAL 229 (265)
Q Consensus 179 ~~~~~~~lg-~-----~~~-------------~~i-~vGD~~~Di~~a~~aG~~~i~-~~~~~-~~~~a~~~v 229 (265)
+.++++... + +|+ .++ ..||+.||-.+.+.|.++.++ ++.+. .+..||.|.
T Consensus 674 ld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 674 LDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred HHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEE
Confidence 666666543 1 333 244 449999999999999998887 33332 255555544
No 239
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=69.11 E-value=2.9 Score=37.35 Aligned_cols=29 Identities=10% Similarity=0.175 Sum_probs=18.8
Q ss_pred HHHcCCCCCcEE-EEcCChhcHHHHHHcCc
Q 024578 183 IRIANVDPKKTI-FFDDSARNIASAKAAGL 211 (265)
Q Consensus 183 ~~~lg~~~~~~i-~vGD~~~Di~~a~~aG~ 211 (265)
++.+.+.++..+ -+|....|+..-+++|+
T Consensus 486 l~slf~e~~PFyAGFGNriTDvisY~~vgI 515 (580)
T COG5083 486 LKSLFIEFDPFYAGFGNRITDVISYSNVGI 515 (580)
T ss_pred HHHhhCcCChhhccccccchhheeeccccC
Confidence 334444444334 57888888888888776
No 240
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=68.12 E-value=3.9 Score=31.33 Aligned_cols=17 Identities=35% Similarity=0.411 Sum_probs=13.9
Q ss_pred ccEEEEecCCCccCCcc
Q 024578 12 YECLLFDLDDTLYPLST 28 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~ 28 (265)
-..+++|+|.||+.+..
T Consensus 6 kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTK 22 (156)
T ss_pred ceEEEEeCCCCcccccc
Confidence 45789999999998653
No 241
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=67.78 E-value=7.1 Score=33.53 Aligned_cols=51 Identities=20% Similarity=0.269 Sum_probs=35.9
Q ss_pred ccCCCCCHHHHHHH-------HHHcC--CCCCcEEEEcCCh-hcHHHHH---------------HcCceEEEECCC
Q 024578 169 RILCKPSLEAIETA-------IRIAN--VDPKKTIFFDDSA-RNIASAK---------------AAGLHTVIVGSS 219 (265)
Q Consensus 169 ~~~~kp~~~~~~~~-------~~~lg--~~~~~~i~vGD~~-~Di~~a~---------------~aG~~~i~~~~~ 219 (265)
..+|||.+--|.++ .+..+ -++....+|||++ .|+..|. .-||.+|.+..|
T Consensus 267 ~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 267 TTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 47789986444433 33333 2678899999999 6999995 567888887544
No 242
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=67.51 E-value=16 Score=33.61 Aligned_cols=33 Identities=9% Similarity=-0.055 Sum_probs=23.3
Q ss_pred CChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHh
Q 024578 98 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 131 (265)
Q Consensus 98 ~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~ 131 (265)
..+...+++..++. .+++|..+.-.++..++.+
T Consensus 134 v~~e~~~v~~~~~~-~~vv~~~PrvMve~Flkey 166 (525)
T PLN02588 134 VGLEMFQVLKRGGK-RVGVSDLPQVMIDVFLRDY 166 (525)
T ss_pred cCHHHHHHHhhcCc-EEEEecCCHHHHHHHHHHh
Confidence 34667777777764 4555558888888888865
No 243
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.54 E-value=6.3 Score=25.13 Aligned_cols=27 Identities=7% Similarity=0.306 Sum_probs=23.0
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhcHHHHHH
Q 024578 178 AIETAIRIANVDPKKTIFFDDSARNIASAKA 208 (265)
Q Consensus 178 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~ 208 (265)
-++++++++|+ ++++||...||++.+.
T Consensus 6 DVqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 35788999998 7999999999998764
No 244
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=66.16 E-value=44 Score=27.33 Aligned_cols=48 Identities=25% Similarity=0.292 Sum_probs=31.8
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCCh---hHHHHHHhH-hCCccccceeeecC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGR-LGLEDCFEGIICFE 144 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~---~~~~~~l~~-~~~~~~fd~i~~~~ 144 (265)
.++|++.+.++.+ +.++.++||+.. ......+.. +|+.-..+.++++.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 3577888888777 688999997653 333344555 67665566676653
No 245
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=63.43 E-value=8.9 Score=31.36 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=12.2
Q ss_pred EEecCCCccCCcc-----cHHHHHHHHHHH
Q 024578 16 LFDLDDTLYPLST-----GFNLACRRNIEE 40 (265)
Q Consensus 16 iFDlDGTLld~~~-----~~~~~~~~~~~~ 40 (265)
+||+||||.+... .....+.+.+..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~ 30 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRA 30 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHH
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHH
Confidence 6899999996433 334445555554
No 246
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=62.85 E-value=19 Score=29.12 Aligned_cols=85 Identities=20% Similarity=0.281 Sum_probs=49.7
Q ss_pred CChhHHHHHhcCC---CcEEEEeCCChhHHHH---HHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 98 PDPVLRNLLLSMP---QRKIIFTNADQKHAME---VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 98 ~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~---~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..||..+.++.|+ .++-.+||...+..+. .|.++|++-.-+.|++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~t----------------------------- 74 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFT----------------------------- 74 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcC-----------------------------
Confidence 6788889888884 6677899987766554 4455564422222332
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIV 216 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~ 216 (265)
| ......++++-++.| .++|.|.. .|+.......-.++.+
T Consensus 75 --s-l~aa~~~~~~~~lrP--~l~v~d~a~~dF~gidTs~pn~VVi 115 (262)
T KOG3040|consen 75 --S-LPAARQYLEENQLRP--YLIVDDDALEDFDGIDTSDPNCVVI 115 (262)
T ss_pred --c-cHHHHHHHHhcCCCc--eEEEcccchhhCCCccCCCCCeEEE
Confidence 2 223445666667765 56666666 4665554444444444
No 247
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=62.37 E-value=66 Score=24.66 Aligned_cols=86 Identities=17% Similarity=0.110 Sum_probs=51.5
Q ss_pred hHHHHHhcCCCcEEEEeCCChhHH-HHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHH
Q 024578 101 VLRNLLLSMPQRKIIFTNADQKHA-MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 179 (265)
Q Consensus 101 ~~~~~l~~l~~~~~i~s~~~~~~~-~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 179 (265)
.+.++|+..+-.++|+|......+ ...++.-+....+..+....|. +..+..|..+......-|..+..
T Consensus 80 ~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~----------~~~H~~W~~~~~D~y~Vase~~~ 149 (169)
T PF06925_consen 80 RLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDF----------DTVHPFWIHPGVDRYFVASEEVK 149 (169)
T ss_pred HHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCC----------CCCCcCeecCCCCEEEECCHHHH
Confidence 456667776777888888765555 5555554432122222222222 11124455555555567888888
Q ss_pred HHHHHHcCCCCCcEEEEc
Q 024578 180 ETAIRIANVDPKKTIFFD 197 (265)
Q Consensus 180 ~~~~~~lg~~~~~~i~vG 197 (265)
+.+++ .|++++++...|
T Consensus 150 ~~l~~-~Gi~~~~I~vtG 166 (169)
T PF06925_consen 150 EELIE-RGIPPERIHVTG 166 (169)
T ss_pred HHHHH-cCCChhHEEEeC
Confidence 77776 899999988776
No 248
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=58.58 E-value=43 Score=28.99 Aligned_cols=80 Identities=10% Similarity=0.054 Sum_probs=49.9
Q ss_pred CCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCc-------------cccceeeecCCCCCCCCCCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLE-------------DCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~-------------~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
-+++||+..+.+.+ + .+++.+||++......+-+.++-. ..++.++.+.
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sg-------------- 260 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESG-------------- 260 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccch--------------
Confidence 46789999988877 3 688999999877655444433211 1123333222
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHH
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIA 204 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~ 204 (265)
+..|...+..++..+.- ...+.|||+- .|.+
T Consensus 261 -------------a~rK~~~l~nil~~~p~--~kfvLVGDsGE~Dpe 292 (373)
T COG4850 261 -------------AARKGQSLRNILRRYPD--RKFVLVGDSGEHDPE 292 (373)
T ss_pred -------------hhhcccHHHHHHHhCCC--ceEEEecCCCCcCHH
Confidence 13445566667777743 5789999998 6843
No 249
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=57.39 E-value=82 Score=28.25 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=63.5
Q ss_pred CCChhHHHHHhcC-----CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM-----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l-----~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
++-|++..+++.+ ...++-|-++.......+|++ -||+|+....-
T Consensus 141 Els~n~a~~lakllp~Yld~~~~~VV~Ggv~ETt~LL~~-----rfD~IfyTGsp------------------------- 190 (477)
T KOG2456|consen 141 ELSPNTAKLLAKLLPQYLDQDLIRVVNGGVPETTELLKQ-----RFDHIFYTGSP------------------------- 190 (477)
T ss_pred hcChhHHHHHHHHHHHhcCcceEEEecCCCchHHHHHHh-----hccEEEecCCc-------------------------
Confidence 4446777777665 234443444444444445554 38898875521
Q ss_pred CCCCHHHHHHHHH-Hc-----CCCCCcEEEEcCChhcHHHH-HHcCceEEEECCCCCCCCCCceecCHh-------HHHH
Q 024578 172 CKPSLEAIETAIR-IA-----NVDPKKTIFFDDSARNIASA-KAAGLHTVIVGSSVPVPPADHALNSIH-------NIKE 237 (265)
Q Consensus 172 ~kp~~~~~~~~~~-~l-----g~~~~~~i~vGD~~~Di~~a-~~aG~~~i~~~~~~~~~~a~~~v~~~~-------el~~ 237 (265)
+-..++..++. ++ .+--+.-.+|+|+. |++.+ ++.-| .-|+++|...-.+||++-+-+ ++..
T Consensus 191 --~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~-d~~ia~~RI~~-gk~~N~GQtCvapDYiL~~k~~~~kli~alk~ 266 (477)
T KOG2456|consen 191 --RVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNC-DLKIAARRIAW-GKWMNSGQTCVAPDYILCSKSIQPKLIDALKS 266 (477)
T ss_pred --hHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCc-CHHHHHHHHHH-HhhccCCCeeccCCeEEecHhhhHHHHHHHHH
Confidence 11334444443 33 22223347888877 54443 33333 345777777778888876633 3444
Q ss_pred HHHHHhcCChhhh
Q 024578 238 AIPEIWEGEGEQL 250 (265)
Q Consensus 238 ~l~~~~~~~~~~~ 250 (265)
.|+++.+..++++
T Consensus 267 ~l~eFYG~n~~eS 279 (477)
T KOG2456|consen 267 TLKEFYGENPKES 279 (477)
T ss_pred HHHHHhCCCcccc
Confidence 5555554444443
No 250
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=56.44 E-value=6.9 Score=34.48 Aligned_cols=18 Identities=28% Similarity=0.484 Sum_probs=15.0
Q ss_pred CccEEEEecCCCccCCcc
Q 024578 11 NYECLLFDLDDTLYPLST 28 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~ 28 (265)
.-|.+.||+||||+++..
T Consensus 74 ~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CcceEEEecCCceeecCC
Confidence 468899999999998553
No 251
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=54.96 E-value=19 Score=30.14 Aligned_cols=32 Identities=25% Similarity=0.124 Sum_probs=26.0
Q ss_pred HHhcCCCcEEEEeCCChhHHHHHHhHhCCccc
Q 024578 105 LLLSMPQRKIIFTNADQKHAMEVLGRLGLEDC 136 (265)
Q Consensus 105 ~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~ 136 (265)
.++..+.+++++|+.+...+...++.+++..+
T Consensus 32 ~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 32 ALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 34445789999999999999999999987644
No 252
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=51.83 E-value=32 Score=28.54 Aligned_cols=37 Identities=14% Similarity=-0.018 Sum_probs=27.4
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeee
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 142 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~ 142 (265)
++..|.+++++|+.+...+...++.+++....+.+++
T Consensus 32 l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~ 68 (270)
T PRK10513 32 ARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCIT 68 (270)
T ss_pred HHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEE
Confidence 4445789999999999999999999887533233443
No 253
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=51.20 E-value=1.4e+02 Score=25.68 Aligned_cols=128 Identities=13% Similarity=0.070 Sum_probs=66.3
Q ss_pred CCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
...++|.+-++++.+ + .+++|+||+..+. +++.+. .+|.++.+=+.... .....
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpd---v~~~L~---~~dql~~sLdA~~~----------------~~~~~ 147 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPD---VLEELK---LPDQLYVSLDAPDE----------------KTFRR 147 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHH---HHHHhc---cCCEEEEEeccCCH----------------HHHHH
Confidence 345666666665554 5 6899999999844 444443 25555544222111 00001
Q ss_pred CCCC-CHHHHHHHHHHcCCCCC----cE---EEEcCChhcH--------HHHHHcCceEEEECCCCCCCCCCce-----e
Q 024578 171 LCKP-SLEAIETAIRIANVDPK----KT---IFFDDSARNI--------ASAKAAGLHTVIVGSSVPVPPADHA-----L 229 (265)
Q Consensus 171 ~~kp-~~~~~~~~~~~lg~~~~----~~---i~vGD~~~Di--------~~a~~aG~~~i~~~~~~~~~~a~~~-----v 229 (265)
+.+| .+..++++++.+..=++ ++ +++..+.||- +..+.+..+.+.+...-+.....++ .
T Consensus 148 InRP~~~~~~e~ile~L~~~~~~~~~~~vir~tlvkg~N~~~e~~~~~a~ll~~~~Pd~velk~~~rpgas~~~l~~~~~ 227 (296)
T COG0731 148 INRPHKKDSWEKILEGLEIFRSEYKGRTVIRTTLVKGINDDEEELEEYAELLERINPDFVELKTYMRPGASRYRLPRSNM 227 (296)
T ss_pred hcCCCCcchHHHHHHHHHHhhhcCCCcEEEEEEEeccccCChHHHHHHHHHHHhcCCCeEEEecCccCChHhhccCcccc
Confidence 2245 34667777766643222 11 2345555532 2344567788877665443333333 4
Q ss_pred cCHhHHHHHHHHHhc
Q 024578 230 NSIHNIKEAIPEIWE 244 (265)
Q Consensus 230 ~~~~el~~~l~~~~~ 244 (265)
..-+++.++.+.+.+
T Consensus 228 p~~e~~~~f~~~l~~ 242 (296)
T COG0731 228 PLHEEVLEFAKELGE 242 (296)
T ss_pred chhHHHHHHHHHhhc
Confidence 455666666665554
No 254
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=50.48 E-value=40 Score=30.21 Aligned_cols=44 Identities=9% Similarity=0.204 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhcH----HHHHHcCceEEEECCC
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSARNI----ASAKAAGLHTVIVGSS 219 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di----~~a~~aG~~~i~~~~~ 219 (265)
.+-+..+++++|---+-+++|||++.|+ .++-..|++.+.+..+
T Consensus 208 ~~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGg 255 (505)
T PF10113_consen 208 MEEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGG 255 (505)
T ss_pred HHHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCC
Confidence 3456677889988889999999999984 4444557777777544
No 255
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=48.05 E-value=39 Score=28.24 Aligned_cols=61 Identities=13% Similarity=0.297 Sum_probs=43.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCC------hhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 179 IETAIRIANVDPKKTIFFDDS------ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 179 ~~~~~~~lg~~~~~~i~vGD~------~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
=..++++++++ ++.-=|| ..=+.+|++.|+..+++.++.. .....++.+++++.+.+.+++
T Consensus 189 n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 189 EKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARLL 255 (256)
T ss_pred HHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHhc
Confidence 34566778875 4554333 2348999999999999988753 333567899999999887753
No 256
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=47.33 E-value=30 Score=22.71 Aligned_cols=39 Identities=18% Similarity=0.211 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCc
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
-|-...++.++|++.+++..+..|-+.--.|..++.+|-
T Consensus 26 aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 26 TPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred CchHHHHHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 577889999999999999999888777778888888873
No 257
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=46.67 E-value=34 Score=27.79 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=27.1
Q ss_pred hHHHHHhc---CCCcEEEEeCCChhHHHHHHhHhCCcc
Q 024578 101 VLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLED 135 (265)
Q Consensus 101 ~~~~~l~~---l~~~~~i~s~~~~~~~~~~l~~~~~~~ 135 (265)
...+++++ .+.+++++|+.+...+...++.+|+..
T Consensus 19 ~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 19 PAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34455444 478999999999999999999998754
No 258
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=46.44 E-value=24 Score=33.43 Aligned_cols=51 Identities=20% Similarity=0.270 Sum_probs=41.7
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCc-cccc-eeeecCC
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFE-GIICFET 145 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~-~~fd-~i~~~~~ 145 (265)
.+++.|++.++|+.+. +.+.|+|-+...++..+++.+... .+|. -|++.++
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 3567799999999995 889999999999999999998766 4664 4666665
No 259
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=45.44 E-value=1.5e+02 Score=25.32 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA 208 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~ 208 (265)
|--..|..+.+ .|+ .++.|||+-|.+-|.+-
T Consensus 163 ~~D~lf~~a~~-~gi---~tigIGDGGNEiGMG~v 193 (291)
T PF14336_consen 163 PLDDLFLAAKE-PGI---PTIGIGDGGNEIGMGNV 193 (291)
T ss_pred cHHHHHHHhhc-CCC---CEEEECCCchhcccChH
Confidence 33344433333 455 48999999998766544
No 260
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=45.43 E-value=40 Score=26.87 Aligned_cols=38 Identities=8% Similarity=-0.088 Sum_probs=30.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
.+.|...+.++++ +.+++++|+.+...+...++.+++.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 3556666776665 6889999999999999998888865
No 261
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=44.43 E-value=54 Score=27.27 Aligned_cols=62 Identities=13% Similarity=0.272 Sum_probs=43.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCh-----hcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 178 AIETAIRIANVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 178 ~~~~~~~~lg~~~~~~i~vGD~~-----~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
.=..++++++++ ++.-=||- .=+.+|+++|+..+++.++.... ...++.+++++.+.+.+.+
T Consensus 181 ~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 181 LERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPALPY-ADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHHHhh
Confidence 334667888885 34443332 23899999999999999886432 2366899999999887754
No 262
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=44.18 E-value=14 Score=30.90 Aligned_cols=90 Identities=16% Similarity=0.209 Sum_probs=59.6
Q ss_pred CCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCC-ccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
.-.|++.++|...+ +.+++.|++......+++..+.- ...+.+.+..+..... .|.+ -|
T Consensus 131 ~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~------------~g~y------vK 192 (262)
T KOG1605|consen 131 RKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK------------DGNY------VK 192 (262)
T ss_pred EcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE------------CCcE------EE
Confidence 45689999999985 77889999999999999998875 3344444443322110 0000 01
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
. +..+|-+..+++.|+|++.-..+=-+-|+.
T Consensus 193 d--------ls~~~~dL~~viIiDNsP~sy~~~p~NgIp 223 (262)
T KOG1605|consen 193 D--------LSVLGRDLSKVIIVDNSPQSYRLQPENGIP 223 (262)
T ss_pred E--------cceeccCcccEEEEcCChHHhccCccCCCc
Confidence 1 145566888999999999877666666653
No 263
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=42.25 E-value=46 Score=26.62 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=26.0
Q ss_pred HHHhcCCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 104 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 104 ~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
..+++.+++++++|+.+...+...++.+++.
T Consensus 26 ~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 26 TRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455567899999999999999999999875
No 264
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=42.16 E-value=46 Score=27.70 Aligned_cols=60 Identities=15% Similarity=0.267 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCC---hh--cHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHH
Q 024578 177 EAIETAIRIANVDPKKTIFFDDS---AR--NIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~---~~--Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~ 240 (265)
+.=..++++++++ ++.-=|| -. =+.+|++.|+..+++.++.... ...++.+++++.+.++
T Consensus 184 e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 184 ELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPY-GDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHh
Confidence 3445667888885 4554333 22 2999999999999999875443 3344799999988775
No 265
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=42.01 E-value=46 Score=26.71 Aligned_cols=36 Identities=11% Similarity=-0.050 Sum_probs=26.4
Q ss_pred hhHHHHHhc---CCCcEEEEeCCChhHHHHHHhHhCCcc
Q 024578 100 PVLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLED 135 (265)
Q Consensus 100 p~~~~~l~~---l~~~~~i~s~~~~~~~~~~l~~~~~~~ 135 (265)
|...+.|++ .|.+++++|+.+...+...++.+++..
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 444555554 468899999999888888888887653
No 266
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=41.52 E-value=2.4e+02 Score=24.56 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=63.3
Q ss_pred CCCChhHHHHHhcC------CCcEEEEeCCChhHHHHHHhHhCCccccceeee-cCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 96 LKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 96 ~~~~p~~~~~l~~l------~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
-..+|+..+.++.. ++.+.++++.+....+.+.+. |. -.+-. ...++.
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~-g~----~avmPl~~pIGs-------------------- 231 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA-GA----VAVMPLGAPIGS-------------------- 231 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc-CC----EEEeeccccccC--------------------
Confidence 44567777777654 566767777776666654443 42 11212 222332
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh---hcHHHHHHcCceEEEECCCCC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~---~Di~~a~~aG~~~i~~~~~~~ 221 (265)
..+-.+++.++.+.+...+ -+.+|-+. .|+..|-+.|.+.++++++-.
T Consensus 232 -g~gv~~p~~i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 232 -GLGIQNPYTIRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred -CCCCCCHHHHHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 1234589999999998544 47888877 599999999999999998753
No 267
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=41.51 E-value=1.1e+02 Score=23.78 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=24.7
Q ss_pred HHHHHHHH---cCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 178 AIETAIRI---ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 178 ~~~~~~~~---lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
-++..+++ -|++ ++||++.. ...|+..|+.++.+.++
T Consensus 113 e~~~~i~~~~~~G~~----viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 113 EIEAAIKQAKAEGVD----VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp HHHHHHHHHHHTT------EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred HHHHHHHHHHHcCCc----EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 34444444 3654 78999875 78889999999988765
No 268
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=40.59 E-value=85 Score=21.96 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=18.6
Q ss_pred cEEEEcCChhcHHHHHHcCceEEE
Q 024578 192 KTIFFDDSARNIASAKAAGLHTVI 215 (265)
Q Consensus 192 ~~i~vGD~~~Di~~a~~aG~~~i~ 215 (265)
.+..||| ..-+.+++.+|+..+.
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~ 24 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVY 24 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEE
Confidence 3678999 7778899999997654
No 269
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=40.36 E-value=1.9e+02 Score=23.14 Aligned_cols=77 Identities=12% Similarity=0.179 Sum_probs=50.4
Q ss_pred CcEEEEeCCChh----HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc
Q 024578 111 QRKIIFTNADQK----HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 186 (265)
Q Consensus 111 ~~~~i~s~~~~~----~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l 186 (265)
--.+++|+.... .++..++.-++. ||.|+--..-+.. .. =-+=|...+..+++.+
T Consensus 72 tltVLLTGR~e~~F~~lI~~ml~s~~L~--Fd~v~LKp~~~~~--------------~s-----Tm~fK~~~l~~ll~~Y 130 (197)
T PF10307_consen 72 TLTVLLTGRRESKFSSLIERMLASKGLE--FDAVCLKPENQRF--------------SS-----TMDFKQAFLEDLLHTY 130 (197)
T ss_pred eeEEEEeCCCchhHHHHHHHHHhcCCCC--ccEEEeCcccccC--------------cc-----ccHHHHHHHHHHHHhc
Confidence 346789988753 455555556666 8887764430000 00 0123457788888888
Q ss_pred CCCCCcEEEEcCChhcHHHHHHc
Q 024578 187 NVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 187 g~~~~~~i~vGD~~~Di~~a~~a 209 (265)
. ..+++-...|+..-++.++..
T Consensus 131 ~-~~~eI~IYeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 131 K-NAEEIRIYEDRPKHVKGFRDF 152 (197)
T ss_pred C-CCCEEEEEcCCHHHHHHHHHH
Confidence 8 789999999999988887763
No 270
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=39.48 E-value=2.2e+02 Score=23.60 Aligned_cols=44 Identities=18% Similarity=0.302 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChh--cHHHHHHcCceEEEECCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSAR--NIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~--Di~~a~~aG~~~i~~~~~ 219 (265)
-|.|..-+.+++.-|++ |+.|||++. +-...++.|++.+.+...
T Consensus 73 ~PGP~~ARE~l~~~~iP---~IvI~D~p~~K~~d~l~~~g~GYIivk~D 118 (277)
T PRK00994 73 APGPKKAREILKAAGIP---CIVIGDAPGKKVKDAMEEQGLGYIIVKAD 118 (277)
T ss_pred CCCchHHHHHHHhcCCC---EEEEcCCCccchHHHHHhcCCcEEEEecC
Confidence 67788888999998884 899999994 678888999999988653
No 271
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=37.80 E-value=55 Score=26.88 Aligned_cols=28 Identities=21% Similarity=0.293 Sum_probs=22.9
Q ss_pred hcCCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 107 LSMPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 107 ~~l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
+..|.+++++|+.+...+...++.+++.
T Consensus 29 ~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 29 REKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred HHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3347889999999999888888888764
No 272
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=37.75 E-value=51 Score=26.44 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=28.8
Q ss_pred CChhHHHHHhc---CCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 98 PDPVLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 98 ~~p~~~~~l~~---l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
+.|...+.++. .|.+++++|+.+...+..+++.+++.
T Consensus 16 i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 16 ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 34555555544 47999999999999999999988865
No 273
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=37.13 E-value=52 Score=27.36 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=23.7
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
++..|.+++++|+.+...+...++.+++.
T Consensus 31 l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 31 LRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 33346889999999999999999988875
No 274
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ....
Probab=35.98 E-value=2.3e+02 Score=22.66 Aligned_cols=83 Identities=12% Similarity=0.159 Sum_probs=54.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE-CCCCCCCCCCceecCHhHHHHHHHHHhcCChhhhhhhcC
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV-GSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQ 255 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~-~~~~~~~~a~~~v~~~~el~~~l~~~~~~~~~~~~~~~~ 255 (265)
..-+.+++++|++-.+...+.|-..=..-.+..+...+.+ ..+-..-+.-.++.+.+|..+.+.+++.. ........
T Consensus 4 ~faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~~ViKadGla~GKGV~i~~~~~eA~~~l~~~~~~--~~fg~~~~ 81 (194)
T PF01071_consen 4 SFAKEFMKRYGIPTAKYKVFTDYEEALEYLEEQGYPYVVIKADGLAAGKGVVIADDREEALEALREIFVD--RKFGDAGS 81 (194)
T ss_dssp HHHHHHHHHTT-SB--EEEESSHHHHHHHHHHHSSSEEEEEESSSCTTTSEEEESSHHHHHHHHHHHHTS--STTCCCGS
T ss_pred HHHHHHHHHcCCCCCCeeEECCHHHHHHHHHhcCCCceEEccCCCCCCCEEEEeCCHHHHHHHHHHhccc--cccCCCCC
Confidence 4567889999999888888876444455566677766344 45544555667889999999999999963 22333345
Q ss_pred cceeee
Q 024578 256 PAAVET 261 (265)
Q Consensus 256 ~~~~~~ 261 (265)
++.+|.
T Consensus 82 ~vvIEE 87 (194)
T PF01071_consen 82 KVVIEE 87 (194)
T ss_dssp SEEEEE
T ss_pred cEEEEe
Confidence 555553
No 275
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=35.15 E-value=85 Score=26.95 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=29.8
Q ss_pred HHHHHHHHHcC-CCCCcEEEEcCChhc-----HHHHHHcCceEEEEC
Q 024578 177 EAIETAIRIAN-VDPKKTIFFDDSARN-----IASAKAAGLHTVIVG 217 (265)
Q Consensus 177 ~~~~~~~~~lg-~~~~~~i~vGD~~~D-----i~~a~~aG~~~i~~~ 217 (265)
.-+..+.|++| +..-.+.||||+ |+ +.++...|++.....
T Consensus 139 ADl~Ti~E~~g~l~g~k~a~vGDg-NNv~nSl~~~~a~~G~dv~ia~ 184 (310)
T COG0078 139 ADLMTIKEHFGSLKGLKLAYVGDG-NNVANSLLLAAAKLGMDVRIAT 184 (310)
T ss_pred HHHHHHHHhcCcccCcEEEEEcCc-chHHHHHHHHHHHhCCeEEEEC
Confidence 34556778888 688899999999 54 556777899766653
No 276
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=35.15 E-value=2.7e+02 Score=23.36 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=73.2
Q ss_pred CCCChhHHHHHhcC------CCcEEEEeCCChhHHHHHHhHhCCccccceeee-cCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 96 LKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 96 ~~~~p~~~~~l~~l------~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
-.++|+..+.++.. ++.+.-+++.+....+ .|+..|.. .+-. +.-++.
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~-rLed~Gc~----aVMPlgsPIGS-------------------- 171 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAK-HLEDIGCA----TVMPLGSPIGS-------------------- 171 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHcCCe----EEeeccCcccC--------------------
Confidence 45668877877665 5777888888766655 44555532 2111 111222
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh---hcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHhcC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~---~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
..|-.++..++.+++...++ +.+|-+. .|+..+-+.|.+.++++++-.+ ..++.++.+.++.-+++
T Consensus 172 -g~Gl~n~~~l~~i~e~~~vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaIak------A~dP~~mA~a~~~AV~A 240 (267)
T CHL00162 172 -GQGLQNLLNLQIIIENAKIP----VIIDAGIGTPSEASQAMELGASGVLLNTAVAQ------AKNPEQMAKAMKLAVQA 240 (267)
T ss_pred -CCCCCCHHHHHHHHHcCCCc----EEEeCCcCCHHHHHHHHHcCCCEEeecceeec------CCCHHHHHHHHHHHHHH
Confidence 12456688898888876654 6777766 5999999999999999987542 34446666665554433
No 277
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=34.99 E-value=71 Score=26.38 Aligned_cols=38 Identities=18% Similarity=0.340 Sum_probs=30.8
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcc
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 135 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~ 135 (265)
+.|...+.++++ +.+++++|+.+...+...++.+++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 556666676644 68999999999999999999998764
No 278
>PRK10976 putative hydrolase; Provisional
Probab=34.77 E-value=59 Score=26.88 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=23.3
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
++..|.+++++|+.+...+...++.+++.
T Consensus 31 l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 31 LTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred HHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 33447889999999999888888888765
No 279
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=34.75 E-value=69 Score=26.45 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=26.2
Q ss_pred hhHHHHHhc---CCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 100 PVLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 100 p~~~~~l~~---l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
|...+.+++ .|.+++++|+.+...+...++.+++.
T Consensus 23 ~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 23 PESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 334445444 46889999999998888888888765
No 280
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=34.44 E-value=51 Score=28.16 Aligned_cols=38 Identities=26% Similarity=0.348 Sum_probs=26.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHh---HhCCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLG---RLGLE 134 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~---~~~~~ 134 (265)
.+.||+.+.+..+ +.+++++||++....+...+ .+|+.
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 5667777766555 67899999998776665554 45544
No 281
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=33.99 E-value=21 Score=33.75 Aligned_cols=68 Identities=7% Similarity=0.117 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCCCCc-EEEEcCChhcHHHHHHcCceE--E-EEC-CCCC-CCCCCceecCHhHHHHHHHHHh
Q 024578 176 LEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHT--V-IVG-SSVP-VPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~--i-~~~-~~~~-~~~a~~~v~~~~el~~~l~~~~ 243 (265)
-+.+..+.+.|.-+... ...||...+|+-.=+++|+.. | .++ .|+. .....-...++.-|.+++..+|
T Consensus 635 IAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mF 708 (738)
T KOG2116|consen 635 IACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMF 708 (738)
T ss_pred HHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhC
Confidence 34555555555522222 455799999999888888732 2 222 2332 1112223456666666666665
No 282
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=33.65 E-value=78 Score=27.16 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=26.3
Q ss_pred HHHhcCCCcEEEEeCCChhHHHHHHhHhCCcc
Q 024578 104 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLED 135 (265)
Q Consensus 104 ~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~ 135 (265)
+.++..+++++++|+.....+..+.+.+++..
T Consensus 28 ~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 28 AALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 34444579999999999999999999998764
No 283
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=33.20 E-value=1.7e+02 Score=20.54 Aligned_cols=37 Identities=8% Similarity=0.114 Sum_probs=27.2
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeee
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 142 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~ 142 (265)
.+.++..+.++++++-++...++...+..+.. ++ +++
T Consensus 6 ~~~l~~~gv~lv~I~~g~~~~~~~f~~~~~~p--~~-ly~ 42 (115)
T PF13911_consen 6 KPELEAAGVKLVVIGCGSPEGIEKFCELTGFP--FP-LYV 42 (115)
T ss_pred HHHHHHcCCeEEEEEcCCHHHHHHHHhccCCC--Cc-EEE
Confidence 45677889999999999986688777665543 55 444
No 284
>PRK05406 LamB/YcsF family protein; Provisional
Probab=32.63 E-value=1.9e+02 Score=24.09 Aligned_cols=88 Identities=16% Similarity=0.162 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHH-----------cCCCCCcEEEEcCChhcHHHHHHcCceEEEE---CCCCC-------CCCCCceecC
Q 024578 173 KPSLEAIETAIRI-----------ANVDPKKTIFFDDSARNIASAKAAGLHTVIV---GSSVP-------VPPADHALNS 231 (265)
Q Consensus 173 kp~~~~~~~~~~~-----------lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~---~~~~~-------~~~a~~~v~~ 231 (265)
||+...|..+.+. ..++|+-.++.-.+..=...|+..|+.++.- .+.+. ...+..++.+
T Consensus 110 KPHGALYN~~~~d~~~a~av~~ai~~~~~~l~l~~~~~s~~~~~A~~~Gl~~~~E~FADR~Y~~dG~Lv~R~~~gAvi~d 189 (246)
T PRK05406 110 KPHGALYNMAAKDPALADAVAEAVAAVDPSLILVGLAGSELIRAAEEAGLRTASEVFADRAYTADGTLVPRSQPGAVIHD 189 (246)
T ss_pred CccHHHHHHHhcCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEEEEEecCCcCCCCCCcCCCCCCCccCC
Confidence 8888777654321 1336664454435555788999999987743 33332 4567788999
Q ss_pred HhHHHHHHHHHhcC-ChhhhhhhcCcceee
Q 024578 232 IHNIKEAIPEIWEG-EGEQLEQVIQPAAVE 260 (265)
Q Consensus 232 ~~el~~~l~~~~~~-~~~~~~~~~~~~~~~ 260 (265)
.+++.+.+.++... .-+..+...=++.++
T Consensus 190 ~~~v~~~~~~~~~~g~v~t~~G~~i~~~ad 219 (246)
T PRK05406 190 EEEAAAQVLQMVQEGRVTAIDGEWIPVEAD 219 (246)
T ss_pred HHHHHHHHHHHHHcCCEEecCCCEEeecCC
Confidence 99999988888643 333333333333333
No 285
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=32.14 E-value=1.1e+02 Score=20.98 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=26.4
Q ss_pred EEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 193 TIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 193 ~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+.+|||. .-+.+++-+|+....+. .+.+++.+.++++.
T Consensus 1 IavIGd~-~~v~gFrLaGv~~~~~~------------~~~ee~~~~l~~l~ 38 (95)
T PF01990_consen 1 IAVIGDR-DTVLGFRLAGVEGVYVN------------TDPEEAEEALKELL 38 (95)
T ss_dssp EEEEE-H-HHHHHHHHTTSEEEEES------------HSHHHHHHHHHHHH
T ss_pred CEEEeCH-HHHHHHHHcCCCCccCC------------CCHHHHHHHHHHHh
Confidence 4678998 66889999999988876 24455555555555
No 286
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=31.50 E-value=94 Score=23.07 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCCCCc--EEEEcCChh------cHHHHHHcCceEEEECCCCC-------CCCCCceecCHhHHHHHHH
Q 024578 176 LEAIETAIRIANVDPKK--TIFFDDSAR------NIASAKAAGLHTVIVGSSVP-------VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~--~i~vGD~~~------Di~~a~~aG~~~i~~~~~~~-------~~~a~~~v~~~~el~~~l~ 240 (265)
++-+..+--+..+...+ ++-|||-+. |...|.+.|-..|.+...+- ...|..++.+.++..++|.
T Consensus 58 ~a~iN~iRT~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~~Qvv~iL~ 137 (141)
T PF11071_consen 58 GAKINAIRTRTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETPEQVVEILR 137 (141)
T ss_pred hhhhhHHHHHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCHHHHHHHHH
Confidence 33444443333343333 556799883 56666667766666654331 4567788899999999998
Q ss_pred HHhc
Q 024578 241 EIWE 244 (265)
Q Consensus 241 ~~~~ 244 (265)
++++
T Consensus 138 Yv~e 141 (141)
T PF11071_consen 138 YVLE 141 (141)
T ss_pred HHhC
Confidence 8763
No 287
>COG4018 Uncharacterized protein conserved in archaea [Function unknown]
Probab=31.33 E-value=1.2e+02 Score=26.48 Aligned_cols=43 Identities=9% Similarity=0.167 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhcHH----HHHHcCceEEEECCC
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSARNIA----SAKAAGLHTVIVGSS 219 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~----~a~~aG~~~i~~~~~ 219 (265)
......+++.|---+-+++|||++.|+. ++-..+...+.+..+
T Consensus 209 k~VaEtArk~GkGveaI~hvgDGyDdli~G~kA~ve~~vDvfvvEGg 255 (505)
T COG4018 209 KRVAETARKSGKGVEAILHVGDGYDDLIDGLKAAVEEVVDVFVVEGG 255 (505)
T ss_pred HHHHHHHHHhCCCceeEEEecCCcHHHHHHHHHHHHhcCcEEEEcCC
Confidence 3455667788888899999999998854 444456666666543
No 288
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=31.27 E-value=36 Score=26.87 Aligned_cols=77 Identities=10% Similarity=0.045 Sum_probs=31.5
Q ss_pred CCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhC-----CccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 95 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLG-----LEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~-----~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
+.++-|++...+++.+.+++++.+.-.........++. +-..||.|++-++.
T Consensus 103 EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~----------------------- 159 (186)
T PF04413_consen 103 ETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSEA----------------------- 159 (186)
T ss_dssp S----HHHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESSHH-----------------------
T ss_pred ccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCHH-----------------------
Confidence 45667888888888889999887754443222211111 12457888775532
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNI 203 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di 203 (265)
-..-+.++|++++.+...|+---|.
T Consensus 160 ---------da~r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 160 ---------DAERFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp ---------HHHHHHTTT-S--SEEE---GGG--
T ss_pred ---------HHHHHHHcCCCcceEEEeCcchhcc
Confidence 2356678899999999999877665
No 289
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=29.95 E-value=93 Score=25.59 Aligned_cols=31 Identities=23% Similarity=0.152 Sum_probs=24.7
Q ss_pred HHHhcCCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 104 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 104 ~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
+.++..|.+++++|+.+...+...++.+++.
T Consensus 26 ~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 26 ERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3445557889999999999999999988864
No 290
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=29.91 E-value=3.3e+02 Score=25.47 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=25.2
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
++..|++ +.|||+.. ...|+..|+..+.+.+++
T Consensus 141 l~~~G~~----~viG~~~~-~~~A~~~gl~~ili~s~e 173 (526)
T TIGR02329 141 LRARGIG----AVVGAGLI-TDLAEQAGLHGVFLYSAD 173 (526)
T ss_pred HHHCCCC----EEECChHH-HHHHHHcCCceEEEecHH
Confidence 3345764 78899975 678899999999997653
No 291
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=29.67 E-value=1e+02 Score=24.58 Aligned_cols=27 Identities=15% Similarity=0.126 Sum_probs=19.5
Q ss_pred hcCCCcEEEEeCCChhHHHHHHhHhCC
Q 024578 107 LSMPQRKIIFTNADQKHAMEVLGRLGL 133 (265)
Q Consensus 107 ~~l~~~~~i~s~~~~~~~~~~l~~~~~ 133 (265)
+..|++++++|+.+...+..+++.++.
T Consensus 28 ~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 28 ESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred HHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 335677888888887777777777764
No 292
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=29.44 E-value=44 Score=21.64 Aligned_cols=24 Identities=25% Similarity=0.303 Sum_probs=16.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCh
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSA 200 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~ 200 (265)
.++..++++.|+.+.+++.|||-.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 43 MGVEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp TTHHHHHHTTT--TT-EEEETTEE
T ss_pred CCHHHHHHHcCCCCCCEEEEcCEE
Confidence 356677888899999999999843
No 293
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=29.33 E-value=55 Score=26.63 Aligned_cols=39 Identities=21% Similarity=0.214 Sum_probs=23.7
Q ss_pred HHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceee
Q 024578 103 RNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGII 141 (265)
Q Consensus 103 ~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~ 141 (265)
.++|+.| +..++|||+++...+...+....+...||.++
T Consensus 2 ~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f 42 (220)
T PF03332_consen 2 AELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVF 42 (220)
T ss_dssp HHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEE
T ss_pred HHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeee
Confidence 4666666 48899999999887777664112223455543
No 294
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=29.26 E-value=62 Score=26.34 Aligned_cols=92 Identities=14% Similarity=0.167 Sum_probs=58.9
Q ss_pred CCChhHH----HHHhcCCCcEEEEeCCChh-----HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 97 KPDPVLR----NLLLSMPQRKIIFTNADQK-----HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 97 ~~~p~~~----~~l~~l~~~~~i~s~~~~~-----~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
.++|++. +.++.-+.+.+|+...... .++..++.+|+.-.|...+|+-+
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL~---------------------- 116 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSLE---------------------- 116 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccccC----------------------
Confidence 4456554 3333346888888887666 78888888887777777776542
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcC-ChhcHHHHHHcCceEEEE
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDD-SARNIASAKAAGLHTVIV 216 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~~ 216 (265)
+.+-..+...++.+|-+ +==+.+.| ...|+...+.+-+++.|.
T Consensus 117 -----~~~~p~i~~F~~~fGkP-~~ei~v~~~~I~~V~VlR~aPCGsT~~ 160 (217)
T PF02593_consen 117 -----ENGNPQIDEFAEYFGKP-KVEIEVENGKIKDVKVLRSAPCGSTWF 160 (217)
T ss_pred -----CCCChhHHHHHHHhCCc-eEEEEecCCcEEEEEEEecCCCccHHH
Confidence 33344777788888854 43344444 446777777766655544
No 295
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=29.15 E-value=1e+02 Score=25.09 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=29.8
Q ss_pred CCcEEEEcCCh----hcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 190 PKKTIFFDDSA----RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 190 ~~~~i~vGD~~----~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
.++++||||.. ||.+.....+....- |.+++|..+.+.+++
T Consensus 175 ~~~I~FfGDkt~pGGNDyei~~~~rt~g~~-------------V~~p~DT~~~l~~l~ 219 (220)
T PF03332_consen 175 FDEIHFFGDKTFPGGNDYEIFEDPRTIGHT-------------VTSPEDTIKQLKELF 219 (220)
T ss_dssp -SEEEEEESS-STTSTTHHHHHSTTSEEEE--------------SSHHHHHHHHHHHH
T ss_pred cceEEEEehhccCCCCCceeeecCCccEEE-------------eCCHHHHHHHHHHHh
Confidence 68999999976 799988777654333 667788888888775
No 296
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Probab=29.14 E-value=4.2e+02 Score=23.73 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=26.3
Q ss_pred HcCCCCCcEEEEcCChh--cHHHHHHcCceEEEECC
Q 024578 185 IANVDPKKTIFFDDSAR--NIASAKAAGLHTVIVGS 218 (265)
Q Consensus 185 ~lg~~~~~~i~vGD~~~--Di~~a~~aG~~~i~~~~ 218 (265)
+.|++|+++++-|.... ++..|.+.|+..+-+++
T Consensus 91 ~aG~~~~~I~f~g~~ks~~ei~~a~e~gi~~i~vdS 126 (394)
T COG0019 91 AAGFPPERIVFSGPAKSEEEIAFALELGIKLINVDS 126 (394)
T ss_pred HcCCChhhEEECCCCCCHHHHHHHHHcCCcEEEeCC
Confidence 33889999999888884 68888888887665543
No 297
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=29.01 E-value=1.7e+02 Score=24.31 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChh--cHHHHHHcCceEEEECCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSAR--NIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~--Di~~a~~aG~~~i~~~~~ 219 (265)
.|.|..-+.++..-|++ |+.|||++. +-....+.|++.+.+...
T Consensus 72 ~PGP~~ARE~l~~~~iP---~IvI~D~p~~k~kd~l~~~g~GYIivk~D 117 (276)
T PF01993_consen 72 APGPTKAREMLSAKGIP---CIVISDAPTKKAKDALEEEGFGYIIVKAD 117 (276)
T ss_dssp SHHHHHHHHHHHHSSS----EEEEEEGGGGGGHHHHHHTT-EEEEETTS
T ss_pred CCCcHHHHHHHHhCCCC---EEEEcCCCchhhHHHHHhcCCcEEEEecC
Confidence 77788899999998886 899999993 677888899999998654
No 298
>PRK06524 biotin carboxylase-like protein; Validated
Probab=28.54 E-value=4.8e+02 Score=24.22 Aligned_cols=120 Identities=12% Similarity=0.001 Sum_probs=68.6
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+-.+|++.++++.-+ -+...++- ...++.+++.+|+.-.....-.+.. -
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~fl~~--DG~iQ~lLE~lGIpy~gP~a~asai---------------------------~ 140 (493)
T PRK06524 90 LLRHPETLEFIKRRGPGGKACFVMF--DEETEALARQAGLEVMHPPAELRHR---------------------------L 140 (493)
T ss_pred hhcCHHHHHHHHhhCCCCceEEecC--CHHHHHHHHHCCCeEECcCHHHHHH---------------------------h
Confidence 456789999998885 33344443 3456778888886421111111111 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEE-cCChhcHHH-HHH--cCceEEEECCCCCCCCCCceecCHhHHHHHHHHHhc
Q 024578 174 PSLEAIETAIRIANVDPKKTIFF-DDSARNIAS-AKA--AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~v-GD~~~Di~~-a~~--aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
-+....+.+++..|++--....+ -++..++.. +.. .|..++.=+........-.++.+.+|+.+.+.+++.
T Consensus 141 mDK~~tK~l~~~aGIPtpp~~~~~~~~~eel~~~~~~~~IGyPvVVKP~~GGSS~GV~~Vkn~eELe~a~~~~~~ 215 (493)
T PRK06524 141 DSKIVTTRLANEAGVPSVPHVLGRVDSYDELSALAHGAGLGDDLVVQTPYGDSGSTTFFVRGQRDWDKYAGGIVG 215 (493)
T ss_pred CCHHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHhccCCCcEEEEECCCCCCcCEEEeCCHHHHHHHHHHhcC
Confidence 22345567788999975555543 233434433 323 677654334333334455678999999998887654
No 299
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=28.30 E-value=2.6e+02 Score=27.11 Aligned_cols=124 Identities=10% Similarity=0.033 Sum_probs=66.0
Q ss_pred hhHHHHHhc---CCCcEEEEeCCChhHHHHHHhHhCCccccceeee-cCCCCCCCCCCCCCCCccc--CcCCcCcccCCC
Q 024578 100 PVLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIEN--NSFSSNQRILCK 173 (265)
Q Consensus 100 p~~~~~l~~---l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k 173 (265)
.+..+.+++ +|..+-++|+......+..-+++|+... ++. ++..+.. .+-+..+. .-.+-++.++.-
T Consensus 495 hdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtn---mypss~llG~~----~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN---MYPSSALLGLG----KDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred cchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccC---cCCchhhccCC----CCCCCCCCcHHHHhhhccCccc
Confidence 444455543 3678888999888887878788876522 222 1111110 00000000 001111122222
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceec
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALN 230 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~ 230 (265)
-.|+---.+.+++.-...-|-+.||+.||..+.+.|.+..+..+.-.. ...+|.++.
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVlt 625 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEc
Confidence 233433455666666667789999999999999999875444432222 334555444
No 300
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=28.28 E-value=4.1e+02 Score=23.73 Aligned_cols=83 Identities=18% Similarity=0.221 Sum_probs=51.6
Q ss_pred cEEEEeCCCh--hHHHHHHhHhCCc-cccceeee--cCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCH---HHHHHHH
Q 024578 112 RKIIFTNADQ--KHAMEVLGRLGLE-DCFEGIIC--FETINPRLQPADNTDGIENNSFSSNQRILCKPSL---EAIETAI 183 (265)
Q Consensus 112 ~~~i~s~~~~--~~~~~~l~~~~~~-~~fd~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~---~~~~~~~ 183 (265)
..+++|+... ++...+++.+++. ..++.-+. +...+ +--+ ..+..++
T Consensus 34 ~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~-------------------------~~t~~~i~~~~~vl 88 (383)
T COG0381 34 LIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLG-------------------------EITGNIIEGLSKVL 88 (383)
T ss_pred eEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHH-------------------------HHHHHHHHHHHHHH
Confidence 3578888877 8889999999887 55555333 11110 1111 2233333
Q ss_pred HHcCCCCCcEEEEcCChhcHHHHHHc---CceEEEECCCCC
Q 024578 184 RIANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGSSVP 221 (265)
Q Consensus 184 ~~lg~~~~~~i~vGD~~~Di~~a~~a---G~~~i~~~~~~~ 221 (265)
+ ...|+-++.-||+..=+.+|..+ .+....+..|.+
T Consensus 89 ~--~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlR 127 (383)
T COG0381 89 E--EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLR 127 (383)
T ss_pred H--hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccc
Confidence 3 45888888889999877755544 566667766654
No 301
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=27.86 E-value=1.7e+02 Score=21.97 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc-----CceEEEECCCCCCCCCCceecCHhHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNI 235 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a-----G~~~i~~~~~~~~~~a~~~v~~~~el 235 (265)
.+...+...++++|.+....-.+.|...++..+-+. +...+....|-..-..|++...+.++
T Consensus 20 ~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~ 86 (152)
T cd00886 20 RSGPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPL 86 (152)
T ss_pred chHHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHH
Confidence 446688899999999988889999999887665331 56767776665555666666555555
No 302
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=27.49 E-value=1.9e+02 Score=21.34 Aligned_cols=14 Identities=14% Similarity=0.221 Sum_probs=12.1
Q ss_pred CCccEEEEecCCCc
Q 024578 10 ANYECLLFDLDDTL 23 (265)
Q Consensus 10 ~~~k~iiFDlDGTL 23 (265)
+.+..|.||+.+||
T Consensus 43 ~~P~iV~FDmK~Tl 56 (128)
T PRK13717 43 NAPVTAAFNMKQTV 56 (128)
T ss_pred CCCeEEEEehHHHH
Confidence 45788999999999
No 303
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=27.43 E-value=1.2e+02 Score=26.50 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=45.4
Q ss_pred EEEEeCCC--hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc-CCC
Q 024578 113 KIIFTNAD--QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVD 189 (265)
Q Consensus 113 ~~i~s~~~--~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l-g~~ 189 (265)
.+|+|+.. ..+-..+.+.+++ ...+..+..+. ... ++.-..++..+-+.+ ..+
T Consensus 12 ~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~-~~~----------------------~~~~~~~~~~~~~~~~~~~ 67 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDS-QSM----------------------AKSTGLAIIELADVLEREK 67 (346)
T ss_dssp EEEEECSS--CHHHHHHHHHTT---SEEEE--STT-S-H----------------------HHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCHHHHHHHHhhCCC-CCCCccccccc-chH----------------------HHHHHHHHHHHHHHHHhcC
Confidence 46778876 6677777777776 44555555443 110 122223333333332 238
Q ss_pred CCcEEEEcCChhcHH---HHHHcCceEEEECCC
Q 024578 190 PKKTIFFDDSARNIA---SAKAAGLHTVIVGSS 219 (265)
Q Consensus 190 ~~~~i~vGD~~~Di~---~a~~aG~~~i~~~~~ 219 (265)
|+=++..||+..=+. +|...++..+.+..|
T Consensus 68 Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 68 PDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp -SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred CCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 899999999997554 455569999999877
No 304
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=27.32 E-value=33 Score=27.19 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.3
Q ss_pred cEEEEecCCCccCCc
Q 024578 13 ECLLFDLDDTLYPLS 27 (265)
Q Consensus 13 k~iiFDlDGTLld~~ 27 (265)
+.|-||+|||++--.
T Consensus 59 ~~v~~D~~GT~m~iP 73 (271)
T PF06901_consen 59 HTVTFDFQGTKMVIP 73 (271)
T ss_pred eeEEEeccceEEEee
Confidence 678999999998633
No 305
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=27.27 E-value=2.5e+02 Score=24.26 Aligned_cols=85 Identities=14% Similarity=0.099 Sum_probs=47.7
Q ss_pred EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc-CCCCC
Q 024578 113 KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVDPK 191 (265)
Q Consensus 113 ~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l-g~~~~ 191 (265)
.+++|+.........++.+++...++..+.+. +.. ..+--+..+..+.+.+ ..+|+
T Consensus 32 ~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~--~~~---------------------~~~~~~~~~~~l~~~l~~~~pD 88 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDLFHLPPDYDLNIMSP--GQT---------------------LGEITSNMLEGLEELLLEEKPD 88 (365)
T ss_pred EEEEeCCCHHHHHHHHHhcCCCCCeeeecCCC--CCC---------------------HHHHHHHHHHHHHHHHHHcCCC
Confidence 57888888877788887777763333323221 100 0111122333333322 23577
Q ss_pred cEEEEcCChhc---HHHHHHcCceEEEECCCC
Q 024578 192 KTIFFDDSARN---IASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 192 ~~i~vGD~~~D---i~~a~~aG~~~i~~~~~~ 220 (265)
=++..||...- ..+|+..|+..+.+..+.
T Consensus 89 iv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~ 120 (365)
T TIGR00236 89 IVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL 120 (365)
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC
Confidence 78888998754 345566788888775443
No 306
>PRK03957 V-type ATP synthase subunit F; Provisional
Probab=27.24 E-value=1.8e+02 Score=20.25 Aligned_cols=22 Identities=27% Similarity=0.391 Sum_probs=17.2
Q ss_pred cEEEEcCChhcHHHHHHcCceEE
Q 024578 192 KTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 192 ~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
.+..||| ..-+.+++.+|+..+
T Consensus 2 kIaVIgD-~dtv~GFrLaGi~~~ 23 (100)
T PRK03957 2 KIAVVGD-RDTVTGFRLAGLTEV 23 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCCce
Confidence 3678999 666889999999643
No 307
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=27.21 E-value=1.2e+02 Score=26.74 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=54.6
Q ss_pred CChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 98 PDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 98 ~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
-.||+.-+|..+. +.++++|+.....+..+++.++...+...-...+..... .
T Consensus 215 kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~-----------------------~-- 269 (393)
T KOG2832|consen 215 KRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYE-----------------------E-- 269 (393)
T ss_pred cCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEEEEEecCccccc-----------------------C--
Confidence 4589999999985 789999999999999999998776665554444433221 0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChh
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSAR 201 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~~ 201 (265)
+.-+ +=+.+++=++..+++|+=..|
T Consensus 270 G~Hv-Kdls~LNRdl~kVivVd~d~~ 294 (393)
T KOG2832|consen 270 GHHV-KDLSKLNRDLQKVIVVDFDAN 294 (393)
T ss_pred ccch-hhhhhhccccceeEEEEcccc
Confidence 1111 125677888899999976655
No 308
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=27.03 E-value=3.7e+02 Score=22.33 Aligned_cols=95 Identities=17% Similarity=0.098 Sum_probs=56.4
Q ss_pred CCCCChhHHHHHhcC------CCcEEEEeCCChhHHHHHHhHhCCccccceeee-cCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 95 KLKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l------~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...++|+..+.++.. |+.+.-+++.+....+ .|+..|.. .+-. +.-++.
T Consensus 102 ~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~ak-rL~d~Gca----avMPlgsPIGS------------------- 157 (247)
T PF05690_consen 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAK-RLEDAGCA----AVMPLGSPIGS------------------- 157 (247)
T ss_dssp TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHH-HHHHTT-S----EBEEBSSSTTT-------------------
T ss_pred CCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHCCCC----EEEeccccccc-------------------
Confidence 345668888877665 5888888888766655 44555532 2211 122222
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh---hcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~---~Di~~a~~aG~~~i~~~~~ 219 (265)
..|--++..++.++++.+++ +.|+-+. +|...|-+.|++.+++++.
T Consensus 158 --g~Gi~n~~~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 158 --GRGIQNPYNLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp -----SSTHHHHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred --CcCCCCHHHHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 12455688999999999875 5666655 6999999999999999864
No 309
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=26.97 E-value=3.1e+02 Score=22.88 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=37.8
Q ss_pred cEEEEcCChhc---HHHHHHcCceEEEECCC-CCCCCCCceecCHhHHHHHHHHHhcC
Q 024578 192 KTIFFDDSARN---IASAKAAGLHTVIVGSS-VPVPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 192 ~~i~vGD~~~D---i~~a~~aG~~~i~~~~~-~~~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
++++|-|-..| +.-|+..|+.++.+-.. .....-|++++..++=...+.-+...
T Consensus 158 d~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dpd~VD~~IP~Ndda~rsi~Li~~~ 215 (252)
T COG0052 158 DVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDPDGVDYVIPGNDDAIRSIALIYWL 215 (252)
T ss_pred CEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCCccCceeecCCChHHHHHHHHHHH
Confidence 57777787766 77788889998877443 34667888888887766655444333
No 310
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=26.85 E-value=70 Score=20.71 Aligned_cols=24 Identities=25% Similarity=0.275 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCh
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSA 200 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~ 200 (265)
..+..++++.|+.+.+++.|||-.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T TIGR03595 43 LGVEDALRKAGAKDGDTVRIGDFE 66 (69)
T ss_pred CCHHHHHHHcCCCCCCEEEEccEE
Confidence 356778888999999999999843
No 311
>PF03671 Ufm1: Ubiquitin fold modifier 1 protein; InterPro: IPR005375 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade. There are many different E3 ligases, which are responsible for the type of ubiquitin chain formed, the specificity of the target protein, and the regulation of the ubiquitinylation process []. Ubiquitinylation is an important regulatory tool that controls the concentration of key signalling proteins, such as those involved in cell cycle control, as well as removing misfolded, damaged or mutant proteins that could be harmful to the cell. Several ubiquitin-like molecules have been discovered, such as Ufm1 (IPR005375 from INTERPRO), SUMO1 (IPR003653 from INTERPRO), NEDD8, Rad23 (IPR004806 from INTERPRO), Elongin B and Parkin (IPR003977 from INTERPRO), the latter being involved in Parkinson's disease []. Ubiquitin-like molecules (UBLs) can be divided into two subclasses: type-1 UBLs, which ligate to target proteins in a manner similar, but not identical, to the ubiquitylation pathway, such as SUMO, NEDD8, and UCRP/ISG15, and type-2 UBLs (also called UDPs, ubiquitin-domain proteins), which contain ubiquitin-like structure embedded in a variety of different classes of large proteins with apparently distinct functions, such as Rad23, Elongin B, Scythe, Parkin, and HOIL-1. This entry represents Ufm1 (ubiquitin-fold modifier), which is a ubiquitin-like protein with structural similarities to ubiquitin [, ]. Ufm1 is one of a number of ubiquitin-like modifiers that conjugate to target proteins in cells through Uba5 (E1) and Ufc1 (E2). The Ufm1-system is conserved in metazoa and plants, suggesting it has a potential role in multicellular organisms []. Human Ufm1 is synthesized as a precursor consisting of 85 amino-acid residues. Prior to activation by Uba5, the extra amino acids at the C-terminal region of Ufm1 are removed to expose Gly, which is necessary for conjugation to target molecule(s). C-terminal processing of Ufm1 requires two specific cysteine peptidases (IPR012462 from INTERPRO): UfSP1 and UfSP2; both peptidases are also able to release Ufm1 from Ufm1-conjugated cellular proteins. UfSP2 is present in most, if not all, of multi-cellular organisms including plant, nematode, fly, and mammal, whereas UfSP1 is not present in plants and nematodes []. For further information on ubiquitin, please see Protein of the Month [].; PDB: 1J0G_A 1WXS_A 1L7Y_A.
Probab=25.84 E-value=24 Score=23.05 Aligned_cols=31 Identities=16% Similarity=0.229 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNI 203 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di 203 (265)
-|-...++.++|++.+++..+..|-+.--.|
T Consensus 26 apftaVlkfaAeeF~vp~~tsaiItndG~GI 56 (76)
T PF03671_consen 26 APFTAVLKFAAEEFKVPPATSAIITNDGVGI 56 (76)
T ss_dssp SBHHHHHHHHHHHTTS-SSSEEEEESSS-EE
T ss_pred CchHHHHHHHHHHcCCCCceEEEEecCCccc
Confidence 4667899999999999999998885443333
No 312
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=25.43 E-value=1.3e+02 Score=25.10 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=24.5
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
++..|.+++++|+.+...+...++.+++.
T Consensus 36 l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 36 LREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 33447999999999999999999999874
No 313
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=24.96 E-value=5.8e+02 Score=23.93 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=24.5
Q ss_pred HcCC-CCCcEEEEcCCh-hcHHHHHH----cCceEEEECC
Q 024578 185 IANV-DPKKTIFFDDSA-RNIASAKA----AGLHTVIVGS 218 (265)
Q Consensus 185 ~lg~-~~~~~i~vGD~~-~Di~~a~~----aG~~~i~~~~ 218 (265)
+.+. ..+-++.||-+. .|+..+-+ .|+..+.++.
T Consensus 264 ~~~~~r~D~IIAIGGGsv~D~AKfvA~~y~rGi~~i~vPT 303 (542)
T PRK14021 264 NEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVNCPT 303 (542)
T ss_pred hcCCCCCcEEEEEcChHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 3344 456678899977 69777666 5999998865
No 314
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=24.91 E-value=4.4e+02 Score=22.51 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=51.0
Q ss_pred EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCc
Q 024578 113 KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK 192 (265)
Q Consensus 113 ~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 192 (265)
-+++|++..+.+...+..+ ... +.++. .|....+..+++..|.....
T Consensus 59 ~I~it~Gs~~~l~~~~~~~--~~~-~vv~~------------------------------~P~y~~y~~~~~~~G~~v~~ 105 (332)
T PRK06425 59 KVLIGPGLTHFIYRLLSYI--NVG-NIIIV------------------------------EPNFNEYKGYAFTHGIRISA 105 (332)
T ss_pred eEEECCCHHHHHHHHHHHh--CCC-cEEEe------------------------------CCChHHHHHHHHHcCCeEEE
Confidence 3788888888777766533 221 33333 45566888899999976533
Q ss_pred EEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHH
Q 024578 193 TIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 239 (265)
Q Consensus 193 ~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l 239 (265)
+= .++...|....+..+.+.+++.++.+.-+. +-+.+++.+++
T Consensus 106 vp-~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~---~~s~~~~~~l~ 148 (332)
T PRK06425 106 LP-FNLINNNPEILNNYNFDLIFIVSPDNPLGN---LISRDSLLTIS 148 (332)
T ss_pred Ee-CCcccCcHHHHhhcCCCEEEEeCCCCCcCC---ccCHHHHHHHH
Confidence 22 122223555555557777887766543333 33444444433
No 315
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=24.86 E-value=3.9e+02 Score=22.95 Aligned_cols=84 Identities=18% Similarity=0.202 Sum_probs=49.2
Q ss_pred CCCChhHHHHHhcC-------CCcEEEEeCCC---hhH-HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 96 LKPDPVLRNLLLSM-------PQRKIIFTNAD---QKH-AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 96 ~~~~p~~~~~l~~l-------~~~~~i~s~~~---~~~-~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
-.++|++.++++.+ +.+..++||+. ... ...+.+.+|+.-..+.++++.
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-------------------- 74 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-------------------- 74 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh--------------------
Confidence 34577888766554 46688999986 333 333347777653333333321
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEE
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 215 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~ 215 (265)
.....++++++ ..+++||.+. -...++.+|+..+.
T Consensus 75 ------------~~~~~ll~~~~---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 75 ------------SPYKSLVNKYE---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred ------------HHHHHHHHHcC---CceEEEeChH-HHHHHHHcCCcccc
Confidence 13345555553 2578888764 46667788876553
No 316
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=24.60 E-value=3.2e+02 Score=20.88 Aligned_cols=61 Identities=8% Similarity=0.111 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHH-----cCceEEEECCCCCCCCCCceecCHhHH
Q 024578 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNI 235 (265)
Q Consensus 175 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~-----aG~~~i~~~~~~~~~~a~~~v~~~~el 235 (265)
+...+...++++|......-.|.|....+..+-+ .+.+.+....|-.....|++..-+.++
T Consensus 23 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGtg~g~~D~t~eal~~l 88 (163)
T TIGR02667 23 SGQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGTGFTGRDVTPEALEPL 88 (163)
T ss_pred cHHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCcHHHHHHH
Confidence 3668888999999998888899999998776632 257777777665555666655555554
No 317
>PF13756 Stimulus_sens_1: Stimulus-sensing domain
Probab=23.65 E-value=50 Score=23.66 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=14.8
Q ss_pred CccEEEEecCCCcc-CCcc
Q 024578 11 NYECLLFDLDDTLY-PLST 28 (265)
Q Consensus 11 ~~k~iiFDlDGTLl-d~~~ 28 (265)
..++-+||-||+|+ ||..
T Consensus 18 ~~RARlyd~dG~Ll~DSr~ 36 (112)
T PF13756_consen 18 RTRARLYDPDGNLLADSRV 36 (112)
T ss_pred CceEEEECCCCCEEeeccc
Confidence 57899999999999 5443
No 318
>TIGR03674 fen_arch flap structure-specific endonuclease. Endonuclease that cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Has 5'-endo-/exonuclease and 5'-pseudo-Y-endonuclease activities. Cleaves the junction between single and double-stranded regions of flap DNA
Probab=23.16 E-value=23 Score=30.88 Aligned_cols=43 Identities=9% Similarity=-0.005 Sum_probs=27.3
Q ss_pred CChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecC
Q 024578 98 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 98 ~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~ 144 (265)
.++.+.++|+.+|++.+.+.+ ..+..-..+...| ..|.|++.|
T Consensus 131 ~~~~~k~lL~~~Gip~i~AP~-EAeaq~a~L~~~g---~vd~v~S~D 173 (338)
T TIGR03674 131 IVESSKKLLDLMGIPYVQAPS-EGEAQAAYMAKKG---DVDYVGSQD 173 (338)
T ss_pred HHHHHHHHHHHcCCeEEECCc-cHHHHHHHHHHCC---CeeEEecCC
Confidence 356778888888998888777 3333334444444 356666654
No 319
>PRK06856 DNA polymerase III subunit psi; Validated
Probab=23.07 E-value=1.6e+02 Score=21.67 Aligned_cols=55 Identities=9% Similarity=0.199 Sum_probs=31.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE-EECCCCC---CCCCCceecCHhHH
Q 024578 178 AIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV-IVGSSVP---VPPADHALNSIHNI 235 (265)
Q Consensus 178 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i-~~~~~~~---~~~a~~~v~~~~el 235 (265)
.++.+++.+++++++|.++. ...+.+. ..+.... |....+. ...+-..-+.+.+|
T Consensus 52 L~~dVLrsl~L~~~q~~~lt--~eq~~~L-~~~~~~~~W~lg~~~~~~~~~~~l~Sp~L~eL 110 (128)
T PRK06856 52 LLQDVLRSLTLSPDQVLCLT--PEQVAML-PQGHRCNSWLLGTDEPLSLAGAQWQSPALTEL 110 (128)
T ss_pred HHHHHHHHcCCCHHHeeeeC--HHHHhhC-CCCCCceEEECCCcccccccCCeEeCcCHHHH
Confidence 89999999999999998863 3334333 2232222 4444332 23344445555555
No 320
>KOG3157 consensus Proline synthetase co-transcribed protein [General function prediction only]
Probab=22.94 E-value=89 Score=25.27 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
..-+.+++++|++++++-.==---+|+.-|-+.|-..+-+++
T Consensus 190 ~~r~~ic~~lg~~~dq~eLSMGMS~DF~~AIe~Gst~VRvGS 231 (244)
T KOG3157|consen 190 KLRESICKKLGIPADQVELSMGMSADFLLAIEQGSTNVRVGS 231 (244)
T ss_pred HHHHHHHHHhCCChHHhhhhcccchhHHHHHHhCCceEEecc
Confidence 345678899999887764332233699999999987776654
No 321
>PF03603 DNA_III_psi: DNA polymerase III psi subunit; InterPro: IPR004615 DNA-directed DNA polymerase (2.7.7.7 from EC) catalyzes DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The enzyme also has 3' to 5' exonuclease activity. It has a core composed of alpha, epsilon and theta chains, that associate with a tau subunit which allows the core dimerization to form the PolIII' complex. PolIII' associates with the gamma complex (gamma, delta, delta', psi and chi chains) and with the beta chain. This family is the psi subunit, the small subunit of the DNA polymerase III holoenzyme in Escherichia coli and related species, whose exact function is not known. It appears to have a narrow taxonomic distribution, being restricted to the gammaproteobacteria.; GO: 0003887 DNA-directed DNA polymerase activity, 0008408 3'-5' exonuclease activity, 0006260 DNA replication; PDB: 1EM8_B 3GLI_O 3SXU_B.
Probab=22.68 E-value=2.2e+02 Score=20.96 Aligned_cols=57 Identities=7% Similarity=0.086 Sum_probs=27.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHH
Q 024578 178 AIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 236 (265)
Q Consensus 178 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~ 236 (265)
.+..+++.+++++++++++.=. .+.+...-...-+|....+. ....-...+++.+|.
T Consensus 53 L~~dVLrsl~L~~~q~~~ltpe--q~~~L~~~~~~~~W~lg~~~~~~~~~~~l~Sp~L~~L~ 112 (128)
T PF03603_consen 53 LFQDVLRSLKLTPEQVLHLTPE--QLAMLPEDHPCWCWFLGCEQQEILAGKQLQSPSLSELD 112 (128)
T ss_dssp HHHHHHHHTT--GGGEEEE-CC--GGGGS-TT-B-EEEEES--S--SSBS-EEEE--HHHHH
T ss_pred HHHHHHHHcCCCHHHhhccCHH--HHhhCcCCCCCcEEEccCCCcccccceeecCcCHHHHh
Confidence 8999999999999999988432 33333222223344433322 233444556666663
No 322
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=22.43 E-value=33 Score=22.63 Aligned_cols=9 Identities=44% Similarity=0.770 Sum_probs=8.2
Q ss_pred EEecCCCcc
Q 024578 16 LFDLDDTLY 24 (265)
Q Consensus 16 iFDlDGTLl 24 (265)
=|||+|.|+
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 323
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=22.33 E-value=4.6e+02 Score=21.85 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=59.6
Q ss_pred CCCChhHHHHHhcC------CCcEEEEeCCChhHHHHHHhHhCCccccceeee-cCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 96 LKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 96 ~~~~p~~~~~l~~l------~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
-.++|+..+.++.. ++.++-+++.+....+.+.+. |.. .+-. +..++..
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~-G~~----~vmPlg~pIGsg------------------- 158 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA-GCA----AVMPLGSPIGSG------------------- 158 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCC----EeCCCCcCCCCC-------------------
Confidence 35567877777665 455554666666666654443 432 2211 1112210
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh---hcHHHHHHcCceEEEECCCCC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~---~Di~~a~~aG~~~i~~~~~~~ 221 (265)
.+..+++.++.+.+..++ .++++-+. .|+..+-+.|.+.+.+++.-.
T Consensus 159 --~Gi~~~~~I~~I~e~~~v----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt 208 (248)
T cd04728 159 --QGLLNPYNLRIIIERADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIA 208 (248)
T ss_pred --CCCCCHHHHHHHHHhCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhc
Confidence 134458888888877543 36776665 589999999999999998743
No 324
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.24 E-value=3.3e+02 Score=20.06 Aligned_cols=48 Identities=17% Similarity=0.163 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh--hcHHHHHHc-----CceEEEECCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSA--RNIASAKAA-----GLHTVIVGSS 219 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~--~Di~~a~~a-----G~~~i~~~~~ 219 (265)
+.|.-..++.++++.|+.-..+=..|.+. .|++..+.+ |--.+++.+|
T Consensus 43 ~QP~~~~i~~aa~~aGl~y~~iPV~~~~iT~~dV~~f~~Al~eaegPVlayCrsG 97 (130)
T COG3453 43 GQPGFAAIAAAAEAAGLTYTHIPVTGGGITEADVEAFQRALDEAEGPVLAYCRSG 97 (130)
T ss_pred CCCChHHHHHHHHhcCCceEEeecCCCCCCHHHHHHHHHHHHHhCCCEEeeecCC
Confidence 48889999999999999866666678777 478777664 4334455555
No 325
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=21.85 E-value=6.8e+02 Score=23.57 Aligned_cols=32 Identities=13% Similarity=0.253 Sum_probs=24.5
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
++..|++ +.|||+.. ...|.++|+..+++.++
T Consensus 151 lk~~G~~----~vvG~~~~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 151 LKANGIE----AVVGAGLI-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred HHHCCCC----EEEcCchH-HHHHHHhCCceEEecCH
Confidence 3445774 68899886 67899999999988643
No 326
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=21.79 E-value=2e+02 Score=23.50 Aligned_cols=25 Identities=12% Similarity=-0.052 Sum_probs=17.3
Q ss_pred CCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 110 PQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 110 ~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
+.+++++|+.+...++.+++.+++.
T Consensus 37 gi~fv~aTGR~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 37 DSLLVYSTGRSPHSYKELQKQKPLL 61 (249)
T ss_pred CceEEEEcCCCHHHHHHHHhcCCCC
Confidence 4567777777777777776666643
No 327
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.49 E-value=58 Score=21.77 Aligned_cols=15 Identities=20% Similarity=0.253 Sum_probs=12.4
Q ss_pred ccEEEEecCCCccCC
Q 024578 12 YECLLFDLDDTLYPL 26 (265)
Q Consensus 12 ~k~iiFDlDGTLld~ 26 (265)
.-.++++-|||.+|+
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 346889999999983
No 328
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=21.42 E-value=1.9e+02 Score=23.19 Aligned_cols=66 Identities=15% Similarity=0.105 Sum_probs=47.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh--hcHHHHHH-cCceEEEECCCCC-CCCCCceecCHhHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSA--RNIASAKA-AGLHTVIVGSSVP-VPPADHALNSIHNIKE 237 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~--~Di~~a~~-aG~~~i~~~~~~~-~~~a~~~v~~~~el~~ 237 (265)
|-.|...+++.++.+.-.-+-.+.-||=+ +|-.-.++ .|...+.+..|.. ...+.++...++++..
T Consensus 23 GSGKTaLie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ai~~l~~ 92 (202)
T COG0378 23 GSGKTALIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEAIEELVL 92 (202)
T ss_pred CcCHHHHHHHHHHHHHhhCCeEEEeceeechhhHHHHHhCCCCeeEEeccCCccCCcHHHHHHHHHHHhh
Confidence 45668899999998876666678889988 48888888 9999999988843 3334444445554443
No 329
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.26 E-value=58 Score=21.92 Aligned_cols=14 Identities=21% Similarity=0.159 Sum_probs=12.1
Q ss_pred cEEEEecCCCccCC
Q 024578 13 ECLLFDLDDTLYPL 26 (265)
Q Consensus 13 k~iiFDlDGTLld~ 26 (265)
-.++++-|||.+|+
T Consensus 40 ~~lvLeeDGT~Vd~ 53 (81)
T cd06537 40 LTLVLEEDGTAVDS 53 (81)
T ss_pred eEEEEecCCCEEcc
Confidence 57889999999983
No 330
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=20.89 E-value=60 Score=21.46 Aligned_cols=15 Identities=20% Similarity=0.146 Sum_probs=12.2
Q ss_pred ccEEEEecCCCccCC
Q 024578 12 YECLLFDLDDTLYPL 26 (265)
Q Consensus 12 ~k~iiFDlDGTLld~ 26 (265)
.-.++++-|||.+++
T Consensus 38 ~~~l~L~eDGT~Vdd 52 (74)
T smart00266 38 PVTLVLEEDGTIVDD 52 (74)
T ss_pred CcEEEEecCCcEEcc
Confidence 346889999999983
No 331
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]
Probab=20.85 E-value=4.6e+02 Score=21.24 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEE---cCChhcHHHHHHcCceEEEECCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFF---DDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~v---GD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
-|..+-++.++.++|.+.+++.++ |...+++.....-|-..++....
T Consensus 100 IPgiSS~q~a~ARlg~~~~~~~~islHgr~~~~l~~~~~~~~~~vil~~~ 149 (210)
T COG2241 100 IPGISSVQLAAARLGWPLQDTEVISLHGRPVELLRPLLENGRRLVILTPD 149 (210)
T ss_pred ecChhHHHHHHHHhCCChHHeEEEEecCCCHHHHHHHHhCCceEEEeCCC
Confidence 677889999999999999988777 45556677666666665555543
No 332
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=20.70 E-value=2.3e+02 Score=21.87 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHH---cCceEEEECCCC
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA---AGLHTVIVGSSV 220 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~---aG~~~i~~~~~~ 220 (265)
.+...+...++.+|++...+..++|....|..+-+ .....+....|-
T Consensus 19 ~n~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~~~dlVIttGG~ 68 (170)
T cd00885 19 TNAAFLAKELAELGIEVYRVTVVGDDEDRIAEALRRASERADLVITTGGL 68 (170)
T ss_pred hHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCEEEECCCC
Confidence 34668888899999998889999999988666543 245666665543
No 333
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=20.63 E-value=2.1e+02 Score=22.30 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=33.5
Q ss_pred cCCCCCcEEEEcCChhcHHHHHHc----CceEEEECCCCC-----CCCCCc-eecCHhHHHHHHHHHhcC
Q 024578 186 ANVDPKKTIFFDDSARNIASAKAA----GLHTVIVGSSVP-----VPPADH-ALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 186 lg~~~~~~i~vGD~~~Di~~a~~a----G~~~i~~~~~~~-----~~~a~~-~v~~~~el~~~l~~~~~~ 245 (265)
+.-+.++++.||++..|+..|.+. |-..+.+..++. -+-+-. --.+.+++.+.+.++.+.
T Consensus 61 ~ahDshniiviG~~~~dm~~A~n~l~~~gGG~vvv~~g~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~ 130 (171)
T PF13382_consen 61 VAHDSHNIIVIGTNDEDMALAANRLIEMGGGIVVVDDGEVLAELPLPIAGLMSDLPAEEVARQLEELEEA 130 (171)
T ss_dssp --TTT--EEEEESSHHHHHHHHHHHHHTTSEEEEEETTEEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCHHHHHHHHHHHHHhCCCEEEEECCEEEEEEeccccceecCCCHHHHHHHHHHHHHH
Confidence 345778999999999998777663 656777766653 111222 122455555555555433
No 334
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=20.31 E-value=9.6e+02 Score=24.75 Aligned_cols=69 Identities=10% Similarity=0.022 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHhc
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
...+..+++++|++.-....+.+...-...+...|...+.=+........-.++.+.+|+.+.+...+.
T Consensus 670 K~~~~~~L~~~GIp~P~~~~~~s~ee~~~~~~~igyPvvVKP~~~~Gg~Gv~iv~~~eeL~~~~~~a~~ 738 (1066)
T PRK05294 670 RERFSKLLEKLGIPQPPNGTATSVEEALEVAEEIGYPVLVRPSYVLGGRAMEIVYDEEELERYMREAVK 738 (1066)
T ss_pred HHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhcCCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHHh
Confidence 455678899999987777777654333445667787544333222233455688999999998887654
No 335
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=20.20 E-value=5.9e+02 Score=22.28 Aligned_cols=116 Identities=19% Similarity=0.118 Sum_probs=59.6
Q ss_pred hhHHHHHhcCCCcEEEEeCCC-hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC---
Q 024578 100 PVLRNLLLSMPQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS--- 175 (265)
Q Consensus 100 p~~~~~l~~l~~~~~i~s~~~-~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~--- 175 (265)
..+.+.+.+.+.++++-|+.. ...++..++.+.-....+.++..+....+ -|-
T Consensus 137 ~plik~iA~~~kPiIlSTGma~~~ei~~av~~~r~~g~~~i~LLhC~s~YP-----------------------ap~ed~ 193 (347)
T COG2089 137 LPLIKYIAKKGKPIILSTGMATIEEIEEAVAILRENGNPDIALLHCTSAYP-----------------------APFEDV 193 (347)
T ss_pred hHHHHHHHhcCCCEEEEcccccHHHHHHHHHHHHhcCCCCeEEEEecCCCC-----------------------CCHHHh
Confidence 345566666667777777643 23344444433222223555544433322 222
Q ss_pred -HHHHHHHHHHcCCCCCcEEEEcCChhcHH---HHHHcCceEE--EECCCCCCCCCCceec-CHhHHHHHHHHH
Q 024578 176 -LEAIETAIRIANVDPKKTIFFDDSARNIA---SAKAAGLHTV--IVGSSVPVPPADHALN-SIHNIKEAIPEI 242 (265)
Q Consensus 176 -~~~~~~~~~~lg~~~~~~i~vGD~~~Di~---~a~~aG~~~i--~~~~~~~~~~a~~~v~-~~~el~~~l~~~ 242 (265)
-..+..+.+.|++ .+-+.|+.-++. +|.+.|...+ .+.-.....++|..++ +++++.+++..+
T Consensus 194 NL~~i~~l~~~Fn~----~vGlSDHT~g~~a~l~AvALGA~viEKHFtldk~~~GpD~~fSldP~efk~mv~~i 263 (347)
T COG2089 194 NLKAIPKLAEAFNA----IVGLSDHTLGILAPLAAVALGASVIEKHFTLDKSREGPDHAFSLDPDEFKEMVDAI 263 (347)
T ss_pred hHHHHHHHHHHhCC----ccccccCccchhHHHHHHHhcccceeeeeeecCCCCCCCcceecCHHHHHHHHHHH
Confidence 2355566667755 356677776643 3444565433 2222334567777555 566666655544
Done!