BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024581
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FQ24|TON1B_ARATH Protein TONNEAU 1b OS=Arabidopsis thaliana GN=TON1B PE=1 SV=1
Length = 257
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/260 (69%), Positives = 214/260 (82%), Gaps = 8/260 (3%)
Query: 1 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60
MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE +EGLPPALLGS
Sbjct: 1 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGLPPALLGS 60
Query: 61 CNDRAKQLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECNLQKDAWKAELKEFSSKNG 120
CNDRA+QLHASPSGRLL+ALICEYLDWAQLNHT+KVY PECN KD+WK+E+++FS NG
Sbjct: 61 CNDRARQLHASPSGRLLSALICEYLDWAQLNHTLKVYQPECNSAKDSWKSEIRDFSINNG 120
Query: 121 YDLNKNGDSAPLLLDVLEGFLKFENSSQAR-ITGRRQPDSESMSHFESRNARRPSSSSVA 179
Y+LN+N DS PLLLDVLEGFLKFEN +Q + RR+ ++ES ++RN P SS +
Sbjct: 121 YELNRNEDSRPLLLDVLEGFLKFENMTQVMGGSSRRESETESSLSLDTRNP--PRRSSAS 178
Query: 180 GGLPPLGRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSDELSDDVVRASAALENLQLDR 239
LP R + ASQAS G++ S YRKDE NWRYD++++ ++V+RAS ALENLQLDR
Sbjct: 179 DSLPHQRRSVSASQAS-----GAATSGYRKDESNWRYDTEDMPEEVMRASTALENLQLDR 233
Query: 240 KARNLTTSWRHAGDGMSDDD 259
K RNLT+SWR+ DG S+++
Sbjct: 234 KTRNLTSSWRNVKDGTSEEE 253
>sp|Q9FQ25|TON1A_ARATH Protein TONNEAU 1a OS=Arabidopsis thaliana GN=TON1A PE=1 SV=1
Length = 260
Score = 360 bits (925), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/262 (71%), Positives = 218/262 (83%), Gaps = 4/262 (1%)
Query: 1 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60
MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE +EG PPALLGS
Sbjct: 1 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGPPPALLGS 60
Query: 61 CNDRAKQLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECNLQKDAWKAELKEFSSKNG 120
CNDRA++LHASPSGRLL+ALICEYLDWAQLNHT+ VY PE NL KD+WK+EL++F+S NG
Sbjct: 61 CNDRARKLHASPSGRLLSALICEYLDWAQLNHTLIVYQPESNLPKDSWKSELRDFNSNNG 120
Query: 121 YDLNKNGDSAPLLLDVLEGFLKFENSSQAR-ITGRRQPDSESMSHFESRNARRPSSSSVA 179
++LN+NGDS PLLLDVLEGFLKFE+ +Q + RR ++ES S ESRN P SS +
Sbjct: 121 FELNRNGDSGPLLLDVLEGFLKFESMTQGMGSSSRRDSETESSSSLESRNP--PRRSSAS 178
Query: 180 GGLPPLGRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSDELSDDVVRASAALENLQLDR 239
LPP RP+ ASQASDRR AG S S YRKDE+NWR + + ++V RASAALENLQLDR
Sbjct: 179 DSLPPQRRPVSASQASDRR-AGLSTSGYRKDEFNWRQGNQDTHEEVTRASAALENLQLDR 237
Query: 240 KARNLTTSWRHAGDGMSDDDGR 261
K RNLT+SWR+ DG ++++GR
Sbjct: 238 KTRNLTSSWRNVRDGTNEEEGR 259
>sp|O95684|FR1OP_HUMAN FGFR1 oncogene partner OS=Homo sapiens GN=FGFR1OP PE=1 SV=1
Length = 399
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 7 EMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAK 66
E +L+ L+ +TLE GVL +I+AELRA+VF A+EE+++V E P + N+ K
Sbjct: 12 EDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKV----ENKTPLV----NESLK 63
Query: 67 QLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECN 102
+ + GRL+ +L+ E+L + L+ T+ V+ PE +
Sbjct: 64 KFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETS 99
>sp|Q4R7V3|FR1OP_MACFA FGFR1 oncogene partner OS=Macaca fascicularis GN=FGFR1OP PE=2 SV=1
Length = 379
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 7 EMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAK 66
E +L+ L+ +TLE GVL +I+AELRA+VF A+EE+++V E P + N+ K
Sbjct: 12 EDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKV----ENKTPLV----NESLK 63
Query: 67 QLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECN 102
+ + GRL+ +L+ E+L + L+ T+ V+ PE +
Sbjct: 64 KFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETS 99
>sp|Q2YDD1|FR1OP_BOVIN FGFR1 oncogene partner OS=Bos taurus GN=FGFR1OP PE=2 SV=1
Length = 399
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 8/96 (8%)
Query: 7 EMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAK 66
E +L+ L+ +TLE GVL +I+AELRA+VF A+EE+++V E P + N+ K
Sbjct: 12 EDTELRYLLVQTLENSGVLNRIKAELRAAVFLALEEQEKV----ENKTPLV----NESLK 63
Query: 67 QLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECN 102
+ + GRL+ +L+ E+L + L+ T+ V+ PE +
Sbjct: 64 KFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETS 99
>sp|Q66JX5|FR1OP_MOUSE FGFR1 oncogene partner OS=Mus musculus GN=Fgfr1op PE=1 SV=1
Length = 399
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 10 DLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQLH 69
+L+ L+ +TLE GVL +I+AELRA+VF A+EE+++V E P + N+ K+
Sbjct: 15 ELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKV----ENKTPLV----NENLKKFL 66
Query: 70 ASPSGRLLTALICEYLDWAQLNHTMKVYLPECN 102
+ GRL+ +L+ E+L + L+ T+ V+ PE +
Sbjct: 67 NTKDGRLVASLVAEFLQFFNLDFTLAVFHPETS 99
>sp|Q4V7C1|FR1OP_RAT FGFR1 oncogene partner OS=Rattus norvegicus GN=Fgfr1op PE=2 SV=1
Length = 399
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 10 DLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQLH 69
+L+ L+ +TLE GVL +I+AELRA+VF A+EE+++V E P + N+ K+
Sbjct: 15 ELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKV----ENKTPLV----NESLKKFL 66
Query: 70 ASPSGRLLTALICEYLDWAQLNHTMKVYLPECN 102
+ GRL+ +L+ E+L + L+ T+ V+ PE +
Sbjct: 67 NTKDGRLVASLVAEFLQFFNLDFTLAVFHPETS 99
>sp|Q4V7R8|FOPNL_XENLA LisH domain-containing protein FOPNL OS=Xenopus laevis GN=Fopnl
PE=2 SV=1
Length = 169
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 30/137 (21%)
Query: 10 DLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQLH 69
DLK +V TLEK+GV+ +++A +RA VFEA++ D P +L
Sbjct: 6 DLKAVVKDTLEKRGVMGQLKARVRAEVFEALD--------DRSEPKPVL----------- 46
Query: 70 ASPSGRLLTALICEYLDWAQLNHTMKVYLPECNLQKDAWKAELKEFSSKNGYDLNK---- 125
SP L+ LI EYL + + ++T V E L + + F +K +LN
Sbjct: 47 -SPENLLINELIREYLAFNKYSYTSSVLTAETGLSEVPLD---RSFLTK---ELNVVEDL 99
Query: 126 NGDSAPLLLDVLEGFLK 142
N S P+L ++ FLK
Sbjct: 100 NSQSVPILYGIVAHFLK 116
>sp|Q9CZS3|FOPNL_MOUSE LisH domain-containing protein FOPNL OS=Mus musculus GN=Fopnl PE=2
SV=1
Length = 174
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Query: 8 MMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQ 67
+ +LK ++ TLEK+GVL ++A +RA VF A++ +DR +
Sbjct: 4 VTELKAVLKDTLEKRGVLGHLKARIRAEVFNALD--------------------DDREPR 43
Query: 68 LHASPSGRLLTALICEYLDWAQLNHTMKVYL-----PECNLQKDAWKAELKEFSSKNGYD 122
S L+ LI EYL++ + +T V + P L + EL N ++
Sbjct: 44 PSLSHENLLINELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIREL------NAFE 97
Query: 123 LNKNGDSAPLLLDVLEGFLKFENSSQARITGRRQPDSESMSHFESRNARRPSSSSV 178
+K+ +S PLL +L FL+ + + H + +RRP V
Sbjct: 98 ESKD-NSIPLLYGILAHFLRGPPDGAQNVLLTESTLHPATKHLSWKPSRRPDDDHV 152
>sp|Q96NB1|FOPNL_HUMAN LisH domain-containing protein FOPNL OS=Homo sapiens GN=FOPNL PE=1
SV=1
Length = 174
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 32/140 (22%)
Query: 8 MMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQ 67
+ +LK ++ TLEKKGVL ++A +RA VF A++ +DR +
Sbjct: 4 VAELKAVLKDTLEKKGVLGHLKARIRAEVFNALD--------------------DDREPR 43
Query: 68 LHASPSGRLLTALICEYLDWAQLNHTMKVYL-----PECNLQKDAWKAELKEFSSKNGYD 122
S L+ LI EYL++ + +T V + P L + EL N ++
Sbjct: 44 PSLSHENLLINELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIHEL------NAFE 97
Query: 123 LNKNGDSAPLLLDVLEGFLK 142
+K+ ++ PLL +L FL+
Sbjct: 98 ESKD-NTIPLLYGILAHFLR 116
>sp|Q5ZJ24|FOPNL_CHICK LisH domain-containing protein FOPNL OS=Gallus gallus GN=FOPNL PE=2
SV=1
Length = 175
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 32/139 (23%)
Query: 8 MMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQ 67
+ +LK ++ TLEK+G L +I+A +RA VF A++++ E PP C++
Sbjct: 4 IAELKAVLKDTLEKRGALRQIKARIRAEVFNALDDQ------SEPRPPL----CHENL-- 51
Query: 68 LHASPSGRLLTALICEYLDWAQLNHTMKVYL-----PECNLQKDAWKAELKEFSSKNGYD 122
L+ LI EYL++ + ++ V PE L + EL
Sbjct: 52 --------LINELIREYLEFNKYKYSASVLTAEAGQPEVPLDRQFLVKELNIVE------ 97
Query: 123 LNKNGDSAPLLLDVLEGFL 141
+ NG S PLL ++ FL
Sbjct: 98 -DANGKSVPLLYGIISHFL 115
>sp|P0CAX8|TGAP1_MOUSE T-cell activation GTPase-activating protein 1 OS=Mus musculus
GN=Tagap1 PE=2 SV=1
Length = 505
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 31/37 (83%)
Query: 10 DLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRV 46
+L+ L+ +TLE GVL +I+AELRA+VF A+EE+++V
Sbjct: 15 ELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKV 51
>sp|C6BSW8|MUTS2_DESAD MutS2 protein OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM
2638 / NCIB 8403 / VKM B-1763) GN=mutS2 PE=3 SV=1
Length = 769
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 62 NDR-AKQLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECN-----LQKDAWKAELKEF 115
NDR L + GRL ++ +Y + + + ++L E N L++ ELK
Sbjct: 192 NDRYVLPLKTNFKGRL-QGIVHDYSNTGETCYFEPMFLVELNNSMQELKQQERTEELKIL 250
Query: 116 SSKNG-----YDLNKNGDSAPLLLDVLEGFLKFENSSQARITGRRQPDSESMSHFESRNA 170
+ G YD + + DVL+ + F ++ +A D +S + F+ R A
Sbjct: 251 TYLTGLVRSEYDQCEAAYGFLVEYDVLQAKINFADAVKAVAV-----DVQSGAGFDLRGA 305
Query: 171 RRPSSSSVAGGLPPLGRPIPASQ 193
R P +S GG+ PL +P Q
Sbjct: 306 RHPLLASAVGGVNPLNIELPTDQ 328
>sp|Q15831|STK11_HUMAN Serine/threonine-protein kinase STK11 OS=Homo sapiens GN=STK11 PE=1
SV=1
Length = 433
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 27/126 (21%)
Query: 112 LKEFSSKNGYDLNKN---------GDSAPLLLDVLEGFLKFENSSQARITGRRQPDSESM 162
L F N Y L +N GD P L D+L+G L++E + + I RQ
Sbjct: 252 LYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ------ 305
Query: 163 SHFESRNARRPSSSSVAGGLPPLGRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSD--E 220
H R P+ + V PIP S + R ++ Y +D + D D +
Sbjct: 306 -HSWFRKKHPPAEAPV---------PIPPSPDTKDRWRSMTVVPYLEDLHGADEDEDLFD 355
Query: 221 LSDDVV 226
+ DD++
Sbjct: 356 IEDDII 361
>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica
GN=Os03g0179900 PE=2 SV=2
Length = 918
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 199 AAGSSMSAYRKDEYNWRYDSDELSDDVVRASAALENLQLDRKARNLTTSWRHAGDGM 255
+G +AY ++ +WR+D + L D++R A+E+ R L + +A DG+
Sbjct: 636 VSGEISAAYYRN--HWRFDLEGLPSDLIRRGVAVEDATQPHGVRLLIEDYPYANDGL 690
>sp|Q2KI89|ARMC9_BOVIN LisH domain-containing protein ARMC9 OS=Bos taurus GN=ARMC9 PE=2
SV=1
Length = 665
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 77 LTALICEYLDWAQLNHTMKVYLPECNLQ 104
L L+ EYLD+A+ T+K +L EC ++
Sbjct: 11 LLGLVKEYLDFAEFEDTLKTFLKECKIK 38
>sp|Q4WVI6|MUB1_ASPFU MYND-type zinc finger protein samB OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=samB
PE=3 SV=1
Length = 605
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 127 GDSAPLLLDVLEGFLKFENSSQARITGRRQPDSESMSHFESRNARR-PSSSSVAGGLPPL 185
D P++ +L+ ++K + ++AR DSES +++ P+S+ V+G L
Sbjct: 109 ADMVPVIATILDNYIKVVDKARARA------DSESQRQSSRHHSKAVPTSNDVSGRPSFL 162
Query: 186 GRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSDELSDDVVRASAALENLQLDRKARNLT 245
+P+ A Q + RR A S+ + + + +D DV S +R A
Sbjct: 163 EQPLTAEQRTSRRHAPPSIEIPPQPFFQENHVADSNVLDVTSPSRVPMTSPPERSAFGQD 222
Query: 246 TSWRHAGDG 254
R DG
Sbjct: 223 VHHRRTNDG 231
>sp|P29114|LOX1_HORVU Linoleate 9S-lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2
Length = 862
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 197 RRAAGSSMSAYRKDEYNWRYDSDELSDDVVRASAALENLQLDRKARNLTTSWRHAGDGMS 256
+ A G S Y+ +W++ L DD+++ A+E+ K R L + + +A DG++
Sbjct: 579 KFALGMSAVVYK----DWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLA 634
>sp|B0Y1D1|MUB1_ASPFC MYND-type zinc finger protein samB OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=samB PE=3 SV=1
Length = 605
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 127 GDSAPLLLDVLEGFLKFENSSQARITGRRQPDSESMSHFESRNARR-PSSSSVAGGLPPL 185
D P++ +L+ ++K + ++AR DSES +++ P+S+ V+G L
Sbjct: 109 ADMVPVIATILDNYIKVVDKARARA------DSESQRQSSRHHSKAVPTSNDVSGRPSFL 162
Query: 186 GRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSDELSDDVVRASAALENLQLDRKARNLT 245
+P+ A Q + RR A S+ + + + +D DV S +R A
Sbjct: 163 EQPLTAEQRTSRRHAPPSIEIPPQPFFQENHVADSNVLDVTSPSRVPMTSPPERSAFGQD 222
Query: 246 TSWRHAGDG 254
R DG
Sbjct: 223 VHHRRTNDG 231
>sp|Q3KI28|GATB_PSEPF Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Pseudomonas fluorescens (strain Pf0-1) GN=gatB PE=1
SV=1
Length = 481
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 84 YLDWAQLNHTMK-VYLPECNLQKDAWKAELKEFSSKNGYDLNKNGDSAPLL 133
+LD A + T+K V + +L++DA K+ +EFS G DLN+ G PLL
Sbjct: 104 HLDIALEDGTVKRVGITRAHLEEDAGKSLHEEFSGATGIDLNRAG--TPLL 152
>sp|Q7SZK7|OFD1_DANRE Oral-facial-digital syndrome 1 protein homolog OS=Danio rerio
GN=ofd1 PE=2 SV=1
Length = 901
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 34/145 (23%)
Query: 10 DLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKD-----EGLPPALLGSCNDR 64
+++ + +T + +G+L ++ +LR + + ++ R E + L+ +CN
Sbjct: 13 EMRQKLYQTFKSRGLLDTLKTQLRNQLIQELQAPVRRGESASRRSADHTDSVLVSACN-- 70
Query: 65 AKQLHASPSGRLLTALICEYLDWAQLNHTMKVYLPECNLQKDAWKAELKEFSSKNGYDLN 124
+++ ++L A +T+ V+ PEC L KD K SS++ +
Sbjct: 71 --------------SVVVDHLRSAGYEYTLSVFQPECGLSKD------KVLSSRDVLQIM 110
Query: 125 KNGDSAPLLLDVL-------EGFLK 142
K PL ++ GFLK
Sbjct: 111 KISPHMPLYKSLVSNIQSGQSGFLK 135
>sp|P33400|PACC_YEAST pH-response transcription factor pacC/RIM101 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RIM101 PE=1
SV=2
Length = 625
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 161 SMSHFESRNARRPSSSSVAGGLPPLGRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSDE 220
+M H+ S A SSS LPPL IP + A G+S+ NW + ++
Sbjct: 479 AMPHYPSVRAAPSYSSSGCSILPPLQSKIPMLPSRRTMAGGTSLKP------NWEFSLNQ 532
Query: 221 --LSDDVVRASAALENL 235
++D++ + A+E +
Sbjct: 533 KSCTNDIIMSKLAIEEV 549
>sp|A1A5P5|ARMC9_RAT LisH domain-containing protein ARMC9 OS=Rattus norvegicus GN=Armc9
PE=2 SV=1
Length = 730
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 77 LTALICEYLDWAQLNHTMKVYLPECNLQKDAWKAELKEFSSKNGYDLNKNGDSAPLLLDV 136
L L+ EYLD+A+ T+K + EC K + K G L K+ +S + D+
Sbjct: 11 LLGLVKEYLDFAEFEDTLKTFSKEC-------KVKGKPLCKTVGGSLKKDSNSLMIQKDL 63
Query: 137 LEGF 140
+ F
Sbjct: 64 VAAF 67
>sp|D3Z3C6|ZFAN4_MOUSE AN1-type zinc finger protein 4 OS=Mus musculus GN=Zfand4 PE=4 SV=1
Length = 758
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 163 SHFESRNARRPSSSSVAGGLPPLGRPIPASQASDRRAAGSSMSAYRKDEYNWRYDSDELS 222
S S NA P +S AG P PA+QA R S + KD+ NW + S
Sbjct: 304 SCLPSGNAHLPETSRNAG-------PSPAAQAPADRPVSSLRNELLKDDDNWEINMLSHS 356
Query: 223 DDVVRASAALENLQLDRKARNLTTSWRHAGDGMS 256
+R L +++L+ + L S H G +S
Sbjct: 357 TSSIRLLPQLTHIELESD-KELADSVLHLGSSLS 389
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,259,755
Number of Sequences: 539616
Number of extensions: 4036170
Number of successful extensions: 9647
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 9606
Number of HSP's gapped (non-prelim): 48
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)