Your job contains 1 sequence.
>024582
MEEQSKWIRESLTSFPQPPNRTNHNAFYGPIDDLFSAVKEKKVLLEEESSIGSLDLGASS
CTSNEDAHRWKFYEEDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHK
KIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSL
GCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRIFTDRENAEIASLDLQF
SHEDDHFFLEYIRNSRININIRQVF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024582
(265 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2027347 - symbol:AT1G11780 species:3702 "Arabi... 837 1.5e-83 1
DICTYBASE|DDB_G0285575 - symbol:alkB "alkylated DNA repai... 259 1.0e-29 2
UNIPROTKB|Q5F3E4 - symbol:ALKBH1 "Uncharacterized protein... 265 5.1e-26 2
ZFIN|ZDB-GENE-050522-196 - symbol:alkbh1 "alkB, alkylatio... 255 8.2e-26 2
UNIPROTKB|Q13686 - symbol:ALKBH1 "Alkylated DNA repair pr... 254 3.2e-24 2
MGI|MGI:2384034 - symbol:Alkbh1 "alkB, alkylation repair ... 252 3.7e-24 2
FB|FBgn0065035 - symbol:AlkB "AlkB" species:7227 "Drosoph... 247 6.2e-24 2
UNIPROTKB|E2RSQ8 - symbol:ALKBH1 "Uncharacterized protein... 251 7.9e-24 2
RGD|1308327 - symbol:Alkbh1 "alkB, alkylation repair homo... 244 4.9e-23 2
POMBASE|SPBC13G1.04c - symbol:abh1 "alkB homolog/2-OG-Fe(... 223 4.1e-21 2
WB|WBGene00021783 - symbol:Y51H7C.5 species:6239 "Caenorh... 208 2.4e-19 2
ASPGD|ASPL0000011493 - symbol:AN3958 species:162425 "Emer... 186 4.6e-14 1
UNIPROTKB|P05050 - symbol:alkB species:83333 "Escherichia... 165 2.4e-12 1
UNIPROTKB|G4MZ21 - symbol:MGG_01363 "Oxidoreductase" spec... 169 3.4e-12 1
TIGR_CMR|SPO_0042 - symbol:SPO_0042 "alkylated DNA repair... 152 5.8e-11 1
UNIPROTKB|P37462 - symbol:alkB "Alpha-ketoglutarate-depen... 153 2.5e-10 1
UNIPROTKB|Q880N6 - symbol:alkB "DNA alkylation damage rep... 153 6.2e-10 1
UNIPROTKB|Q4KB70 - symbol:alkB "Alkylated DNA repair prot... 150 1.7e-09 1
UNIPROTKB|Q48JG4 - symbol:alkB "Alkylated DNA repair prot... 143 2.0e-08 1
UNIPROTKB|Q0C209 - symbol:alkB "Alkylated DNA repair prot... 138 6.3e-08 1
TAIR|locus:2087452 - symbol:AT3G14160 species:3702 "Arabi... 117 0.00019 1
>TAIR|locus:2027347 [details] [associations]
symbol:AT1G11780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005123
PROSITE:PS51471 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0006281 GO:GO:0016706 GO:GO:0016702
eggNOG:COG3145 KO:K10765 Pfam:PF13532 EMBL:AC007296 EMBL:BT030097
IPI:IPI00528819 PIR:G86251 RefSeq:NP_172643.1 UniGene:At.42110
UniGene:At.75171 ProteinModelPortal:Q9SA98 SMR:Q9SA98 PaxDb:Q9SA98
PRIDE:Q9SA98 DNASU:837723 EnsemblPlants:AT1G11780.1 GeneID:837723
KEGG:ath:AT1G11780 TAIR:At1g11780 HOGENOM:HOG000006390
InParanoid:Q9SA98 OMA:DALCQLA PhylomeDB:Q9SA98
ProtClustDB:CLSN2682191 Genevestigator:Q9SA98 GermOnline:AT1G11780
Uniprot:Q9SA98
Length = 345
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 170/266 (63%), Positives = 188/266 (70%)
Query: 1 MEEQSKWIRESLTSFPQPPNRTNHNAFYGPIDDLFSAXXXXXXXXXXXSSIGSLDLGASS 60
++EQ KWI+ESLTSFPQPPNRTNHNA YGPIDDLF + DL
Sbjct: 96 LKEQCKWIKESLTSFPQPPNRTNHNAIYGPIDDLFDSAKENKVLVQD-------DL---- 144
Query: 61 CTSNEDAHRWKFYEE-DIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPH 119
T+N +WKFYEE DI +CKSV ASVLLRKLRW TLGLQFDWSKRNY+VSLPH
Sbjct: 145 -TNN----KWKFYEEVDIEKATRSSCKSVSASVLLRKLRWSTLGLQFDWSKRNYDVSLPH 199
Query: 120 KKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMS 179
IPDALCQLA+ AA AMP GEEF+PE AIVNYF MEADWSKPIVSMS
Sbjct: 200 NNIPDALCQLAKTHAAIAMPDGEEFRPEGAIVNYFGIGDTLGGHLDDMEADWSKPIVSMS 259
Query: 180 LGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRIFTDRENAEIASLDLQ 239
LGCKAIFLLGGKS++DPP AM+LRSGD VLMAGEARECFHG+PRIFT ENA+I +L+ +
Sbjct: 260 LGCKAIFLLGGKSKDDPPHAMYLRSGDVVLMAGEARECFHGIPRIFTGEENADIGALESE 319
Query: 240 FSHEDDHFFLEYXXXXXXXXXXXQVF 265
SHE HFF EY QVF
Sbjct: 320 LSHESGHFFAEYIKTSRININIRQVF 345
>DICTYBASE|DDB_G0285575 [details] [associations]
symbol:alkB "alkylated DNA repair protein"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR005123 dictyBase:DDB_G0285575
GenomeReviews:CM000153_GR GO:GO:0046872 EMBL:AAFI02000079
GO:GO:0006281 GO:GO:0016706 GO:GO:0016702 eggNOG:COG3145 KO:K10765
Pfam:PF13532 OMA:DALCQLA RefSeq:XP_638135.1
ProteinModelPortal:Q54N08 EnsemblProtists:DDB0234218 GeneID:8625183
KEGG:ddi:DDB_G0285575 InParanoid:Q54N08 ProtClustDB:CLSZ2728919
Uniprot:Q54N08
Length = 393
Score = 259 (96.2 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 61/162 (37%), Positives = 91/162 (56%)
Query: 93 LLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQP---EAA 149
LL KL W TLG Q+ W+ R Y+ +++ PD L +L +++A I +F P EAA
Sbjct: 211 LLDKLAWSTLGYQYQWTPRLYSEEF-YEEFPDDLQELVQKIA-----IATKFDPYVAEAA 264
Query: 150 IVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVL 209
VN++ E + KPI+S+S G A+FL+G ++R+ P+ +F+RSGD V+
Sbjct: 265 TVNFYSEDSIMGGHLDDAEQEMEKPIISISFGSTAVFLMGAETRDIAPVPLFIRSGDIVI 324
Query: 210 MAGEARECFHGVPRIFTDRENAEIASLDLQFSHEDDHFFLEY 251
M G +R C+HGV +I EN S DL E+D L+Y
Sbjct: 325 MGGRSRYCYHGVAKIV---EN----SFDLGLIDENDDQDLKY 359
Score = 87 (35.7 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 3 EQSKWIRESLTSFPQPPNRTNHNAFYGPIDDLF 35
+Q KWI+ +L + PPN N F+GPI +L+
Sbjct: 136 QQKKWIKHALEDYADPPNNNNITLFHGPIKNLW 168
>UNIPROTKB|Q5F3E4 [details] [associations]
symbol:ALKBH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001890 "placenta development" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IEA] [GO:0008198 "ferrous iron
binding" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0042056 "chemoattractant activity" evidence=IEA]
[GO:0042245 "RNA repair" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0070579 "methylcytosine
dioxygenase activity" evidence=IEA] [GO:0070989 "oxidative
demethylation" evidence=IEA] [GO:0080111 "DNA demethylation"
evidence=IEA] InterPro:IPR005123 PROSITE:PS51471 GO:GO:0005739
GO:GO:0030154 GO:GO:0008198 GO:GO:0006307 GO:GO:0080111
GO:GO:0048589 GO:GO:0005719 CTD:8846 eggNOG:COG3145
HOGENOM:HOG000033905 HOVERGEN:HBG050487 KO:K10765 OMA:KKYSADH
OrthoDB:EOG4868CJ GO:GO:0042056 GO:GO:0003906 GO:GO:0070579
GO:GO:0070989 GO:GO:0042245 Pfam:PF13532
GeneTree:ENSGT00390000004599 EMBL:AADN02003502 EMBL:AJ851706
IPI:IPI00598022 RefSeq:NP_001026723.1 UniGene:Gga.22733
STRING:Q5F3E4 Ensembl:ENSGALT00000017074 GeneID:428898
KEGG:gga:428898 InParanoid:Q5F3E4 NextBio:20829778 Uniprot:Q5F3E4
Length = 371
Score = 265 (98.3 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 58/156 (37%), Positives = 84/156 (53%)
Query: 80 LRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMP 139
LR K + LL KLRW TLG ++W + Y+ + H P L L+ ++AA
Sbjct: 136 LRRKGSSKCEPRSLLEKLRWVTLGYHYNWDTKKYSAN-HHTPFPSDLAFLSEQVAAACGF 194
Query: 140 IGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLA 199
G FQ +A I+NY+ E D S+P++S S G +IFLLGG RE+ P A
Sbjct: 195 RG--FQAQAGILNYYHFDSSLGIHVDESELDHSRPLLSFSFGQSSIFLLGGLKREEAPTA 252
Query: 200 MFLRSGDAVLMAGEARECFHGVPRIFTDRENAEIAS 235
MF+ SGD ++M+G +R +H VPR+ + E + S
Sbjct: 253 MFMHSGDIMVMSGFSRLLYHAVPRVLPNPEGTALPS 288
Score = 44 (20.5 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 4 QSKWIRESLTSFPQPPNRTNHNAFYGP 30
Q W+++ L + Q PN N + P
Sbjct: 96 QRHWVKQCLKLYTQKPNVCNLDLHMAP 122
>ZFIN|ZDB-GENE-050522-196 [details] [associations]
symbol:alkbh1 "alkB, alkylation repair homolog 1
(E. coli)" species:7955 "Danio rerio" [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR005123
PROSITE:PS51471 ZFIN:ZDB-GENE-050522-196 GO:GO:0016706 Pfam:PF13532
GeneTree:ENSGT00390000004599 EMBL:CU695234 EMBL:CU855697
IPI:IPI00503865 Ensembl:ENSDART00000128887 Bgee:F1QW33
Uniprot:F1QW33
Length = 367
Score = 255 (94.8 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 56/153 (36%), Positives = 83/153 (54%)
Query: 73 YEEDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARR 132
+E I ++ K + + LL KLRW TLG +DW+ + Y+ + P L L+ +
Sbjct: 129 WERSIDAIQRKGNRKREPKTLLEKLRWVTLGYHYDWNSKTYSPE-HYTPFPKELQSLSHK 187
Query: 133 LAAPAMPIG-EEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGK 191
+AA G EF EA I+NY+ E D ++P++S S G A+FLLGG
Sbjct: 188 VAAAC---GFSEFDAEAGILNYYRSDSSLGIHVDESELDHTRPLLSYSFGQTAVFLLGGT 244
Query: 192 SREDPPLAMFLRSGDAVLMAGEARECFHGVPRI 224
RED P A+F+ SGD ++M+G +R +H VP I
Sbjct: 245 KREDRPTALFMHSGDIMVMSGPSRLHYHAVPCI 277
Score = 52 (23.4 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 4 QSKWIRESLTSFPQPPNRTNHNAFYGPID 32
Q W+++ L +PQ PN N + +D
Sbjct: 96 QQFWVKQCLKIYPQKPNVCNLDMHMSSVD 124
>UNIPROTKB|Q13686 [details] [associations]
symbol:ALKBH1 "Alkylated DNA repair protein alkB homolog 1"
species:9606 "Homo sapiens" [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042056 "chemoattractant activity" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0080111 "DNA
demethylation" evidence=IDA] [GO:0008198 "ferrous iron binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006307
"DNA dealkylation involved in DNA repair" evidence=IDA] [GO:0006281
"DNA repair" evidence=IDA] [GO:0070989 "oxidative demethylation"
evidence=IDA] [GO:0042245 "RNA repair" evidence=IDA] [GO:0070579
"methylcytosine dioxygenase activity" evidence=IDA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471 GO:GO:0005739
GO:GO:0001764 GO:GO:0008198 GO:GO:0006307 GO:GO:0001701
GO:GO:0080111 GO:GO:0016702 GO:GO:0001890 GO:GO:0048589
GO:GO:0005719 EMBL:X91992 EMBL:AC008044 EMBL:BC025787
IPI:IPI00014482 PIR:S64736 RefSeq:NP_006011.2 UniGene:Hs.94542
ProteinModelPortal:Q13686 STRING:Q13686 PhosphoSite:Q13686
DMDM:12643239 PRIDE:Q13686 DNASU:8846 Ensembl:ENST00000216489
GeneID:8846 KEGG:hsa:8846 UCSC:uc001xuc.1 CTD:8846
GeneCards:GC14M078138 H-InvDB:HIX0011855 HGNC:HGNC:17911
HPA:HPA044087 MIM:605345 neXtProt:NX_Q13686 PharmGKB:PA134906996
eggNOG:COG3145 HOGENOM:HOG000033905 HOVERGEN:HBG050487
InParanoid:Q13686 KO:K10765 OMA:KKYSADH OrthoDB:EOG4868CJ
PhylomeDB:Q13686 GenomeRNAi:8846 NextBio:33208 ArrayExpress:Q13686
Bgee:Q13686 CleanEx:HS_ALKBH1 Genevestigator:Q13686
GermOnline:ENSG00000100601 GO:GO:0042056 GO:GO:0003906
GO:GO:0070579 GO:GO:0031175 GO:GO:0070989 GO:GO:0042245
Pfam:PF13532 TIGRFAMs:TIGR00568 Uniprot:Q13686
Length = 389
Score = 254 (94.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 58/158 (36%), Positives = 85/158 (53%)
Query: 73 YEEDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARR 132
+E+ LR K + LL KLRW T+G ++W + Y+ + P L L+ +
Sbjct: 144 WEQSKEFLRYKEATKRRPRSLLEKLRWVTVGYHYNWDSKKYSAD-HYTPFPSDLGFLSEQ 202
Query: 133 LAAPAMPIG-EEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGK 191
+AA G E+F+ EA I+NY+ E D SKP++S S G AIFLLGG
Sbjct: 203 VAAAC---GFEDFRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGL 259
Query: 192 SREDPPLAMFLRSGDAVLMAGEARECFHGVPRIFTDRE 229
R++ P AMF+ SGD ++M+G +R H VPR+ + E
Sbjct: 260 QRDEAPTAMFMHSGDIMIMSGFSRLLNHAVPRVLPNPE 297
Score = 40 (19.1 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 4 QSKWIRESLTSFPQPPNRTN 23
Q W+++ L + Q PN N
Sbjct: 111 QWHWVKQCLKLYSQKPNVCN 130
>MGI|MGI:2384034 [details] [associations]
symbol:Alkbh1 "alkB, alkylation repair homolog 1 (E. coli)"
species:10090 "Mus musculus" [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IDA] [GO:0001890 "placenta development" evidence=IMP]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=ISO] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0042056
"chemoattractant activity" evidence=IDA] [GO:0042245 "RNA repair"
evidence=ISO] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0050918 "positive chemotaxis" evidence=IDA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0070579
"methylcytosine dioxygenase activity" evidence=ISO] [GO:0070989
"oxidative demethylation" evidence=ISO] [GO:0080111 "DNA
demethylation" evidence=ISO] InterPro:IPR004574 InterPro:IPR005123
PROSITE:PS51471 MGI:MGI:2384034 GO:GO:0005739 GO:GO:0001764
GO:GO:0008198 GO:GO:0006307 GO:GO:0001701 GO:GO:0043524
GO:GO:0080111 GO:GO:0016702 GO:GO:0001890 GO:GO:0048589
GO:GO:0005719 CTD:8846 eggNOG:COG3145 HOGENOM:HOG000033905
KO:K10765 OMA:KKYSADH OrthoDB:EOG4868CJ GO:GO:0042056 GO:GO:0003906
GO:GO:0070579 GO:GO:0031175 GO:GO:0070989 GO:GO:0042245
Pfam:PF13532 TIGRFAMs:TIGR00568 EMBL:CT030249 IPI:IPI00858117
RefSeq:NP_001096035.1 UniGene:Mm.486235 ProteinModelPortal:P0CB42
SMR:P0CB42 STRING:P0CB42 PRIDE:P0CB42 Ensembl:ENSMUST00000162961
GeneID:211064 KEGG:mmu:211064 UCSC:uc007oix.1
GeneTree:ENSGT00390000004599 ChiTaRS:ALKBH1 NextBio:373138
Bgee:P0CB42 Uniprot:P0CB42
Length = 389
Score = 252 (93.8 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 60/166 (36%), Positives = 84/166 (50%)
Query: 64 NEDAHRWK-----FYEEDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLP 118
N D H K +E+ LR K + LL +LRW TLG ++W + Y+
Sbjct: 130 NLDKHMTKEETQGLWEQSKEVLRSKEVTKRRPRSLLERLRWVTLGYHYNWDSKKYSAD-H 188
Query: 119 HKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSM 178
+ P L L+ ++A G FQ EA I+NY+ E D SKP++S
Sbjct: 189 YTPFPSDLAFLSEQVATACGFQG--FQAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSF 246
Query: 179 SLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRI 224
S G AIFLLGG R++ P AMF+ SGD ++M+G +R H VPR+
Sbjct: 247 SFGQSAIFLLGGLKRDEAPTAMFMHSGDIMVMSGFSRLLNHAVPRV 292
Score = 42 (19.8 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 4 QSKWIRESLTSFPQPPNRTN 23
Q W+++ L + Q PN N
Sbjct: 111 QRHWVKQCLKLYSQKPNVCN 130
>FB|FBgn0065035 [details] [associations]
symbol:AlkB "AlkB" species:7227 "Drosophila melanogaster"
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR005123 PROSITE:PS51471 EMBL:AE014298
GO:GO:0016706 eggNOG:COG3145 KO:K10765 Pfam:PF13532
GeneTree:ENSGT00390000004599 OMA:HAIPCIG EMBL:BT030983
EMBL:BK003152 RefSeq:NP_996458.1 UniGene:Dm.10934 SMR:Q7KUZ2
EnsemblMetazoa:FBtr0074168 GeneID:2768870 KEGG:dme:Dmel_CG33250
UCSC:CG33250-RA CTD:2768870 FlyBase:FBgn0065035 InParanoid:Q7KUZ2
OrthoDB:EOG4M9071 GenomeRNAi:2768870 NextBio:848390 Uniprot:Q7KUZ2
Length = 332
Score = 247 (92.0 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 52/138 (37%), Positives = 79/138 (57%)
Query: 97 LRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFXX 156
+RW T G +W + Y+ + P+ L L L A A+ + F+PEAAIVNY+
Sbjct: 141 MRWTTFGYHHNWDTKIYDEEM-QSPFPEDLSSLCG-LFAQALGYAD-FKPEAAIVNYYPV 197
Query: 157 XXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARE 216
E + S P+ S S G AIFL+GG+S E+ P A++L+SGD ++M+GE+R
Sbjct: 198 GSTLSGHTDHSEPNKSAPLFSFSFGQTAIFLIGGRSLEEKPTAIYLQSGDVMIMSGESRL 257
Query: 217 CFHGVPRIFTDRENAEIA 234
C+H VPRI + +A ++
Sbjct: 258 CYHAVPRIIKTQASATLS 275
Score = 42 (19.8 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 7 WIRESLTSFPQPPNRTNHN 25
W L FP+ PN N N
Sbjct: 91 WSARCLRDFPRTPNIVNLN 109
>UNIPROTKB|E2RSQ8 [details] [associations]
symbol:ALKBH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471
GO:GO:0006281 GO:GO:0016706 CTD:8846 KO:K10765 OMA:KKYSADH
Pfam:PF13532 TIGRFAMs:TIGR00568 GeneTree:ENSGT00390000004599
EMBL:AAEX03005881 RefSeq:XP_537525.3 Ensembl:ENSCAFT00000027288
GeneID:480404 KEGG:cfa:480404 NextBio:20855423 Uniprot:E2RSQ8
Length = 389
Score = 251 (93.4 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 57/152 (37%), Positives = 81/152 (53%)
Query: 73 YEEDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARR 132
+E+ LR K + LL KLRW TLG ++W + Y+ + P L L+ +
Sbjct: 144 WEQSKELLRYKEVNKRRPRSLLEKLRWVTLGYHYNWDSKKYSAD-HYTPFPSDLAFLSEQ 202
Query: 133 LAAPAMPIGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKS 192
+AA G F+ EA I+NY+ E D SKP++S S G AIFLLGG
Sbjct: 203 VAAACGFQG--FRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLK 260
Query: 193 REDPPLAMFLRSGDAVLMAGEARECFHGVPRI 224
R++ P AMF+ SGD ++M+G +R H VPR+
Sbjct: 261 RDEAPTAMFMHSGDIMVMSGFSRLLNHAVPRV 292
Score = 40 (19.1 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 4 QSKWIRESLTSFPQPPNRTN 23
Q W+++ L + Q PN N
Sbjct: 111 QWHWVKQCLKLYSQKPNVCN 130
Score = 39 (18.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 29 GPIDDLFSAXXXXXXXXXXXSSIGSLDLGASSCTSNEDAHR 69
G + D FSA + L SS S++DAHR
Sbjct: 41 GAVID-FSAAHTARGTGPGARKVVKSQLSVSS-VSDQDAHR 79
>RGD|1308327 [details] [associations]
symbol:Alkbh1 "alkB, alkylation repair homolog 1 (E. coli)"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0001890 "placenta development" evidence=ISO]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISO] [GO:0005719 "nuclear euchromatin" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006307 "DNA dealkylation involved in DNA
repair" evidence=ISO] [GO:0008198 "ferrous iron binding"
evidence=ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO] [GO:0042056 "chemoattractant activity"
evidence=ISO] [GO:0042245 "RNA repair" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=ISO]
[GO:0048589 "developmental growth" evidence=ISO] [GO:0050918
"positive chemotaxis" evidence=ISO] [GO:0070579 "methylcytosine
dioxygenase activity" evidence=ISO] [GO:0070989 "oxidative
demethylation" evidence=ISO] [GO:0080111 "DNA demethylation"
evidence=ISO] InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471
RGD:1308327 GO:GO:0005739 GO:GO:0001764 GO:GO:0008198 GO:GO:0006307
GO:GO:0001701 GO:GO:0080111 GO:GO:0001890 GO:GO:0048589
GO:GO:0005719 OrthoDB:EOG4868CJ GO:GO:0042056 GO:GO:0003906
GO:GO:0070579 GO:GO:0031175 GO:GO:0070989 GO:GO:0042245
Pfam:PF13532 TIGRFAMs:TIGR00568 GeneTree:ENSGT00390000004599
IPI:IPI00870398 Ensembl:ENSRNOT00000016389 UCSC:RGD:1308327
Uniprot:D3Z8W2
Length = 389
Score = 244 (91.0 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 59/166 (35%), Positives = 84/166 (50%)
Query: 64 NEDAHRWK-----FYEEDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLP 118
N D H K +E+ LR K + LL +LRW TLG ++W + Y+
Sbjct: 130 NLDKHMTKEETQGLWEQSKEFLRSKDKTKRRPRSLLERLRWVTLGYHYNWDSKKYSAD-H 188
Query: 119 HKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSM 178
+ P L L+ ++A G F+ EA I+NY+ E D SKP++S
Sbjct: 189 YTPFPSDLAFLSEQVATACGFQG--FRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSF 246
Query: 179 SLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRI 224
S G AIFLLGG R++ P AMF+ SGD ++M+G +R H VPR+
Sbjct: 247 SFGQSAIFLLGGLKRDEAPTAMFMHSGDIMVMSGFSRLLNHAVPRV 292
Score = 41 (19.5 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 4 QSKWIRESLTSFPQPPNRTN 23
Q WI++ L + Q PN N
Sbjct: 111 QWHWIKQCLKLYSQKPNVCN 130
>POMBASE|SPBC13G1.04c [details] [associations]
symbol:abh1 "alkB homolog/2-OG-Fe(II) oxygenase family
Abh1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471
PomBase:SPBC13G1.04c GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0006307 EMBL:CU329671 GO:GO:0016706 GO:GO:0016702
eggNOG:COG3145 GO:GO:0003906 Pfam:PF13532 TIGRFAMs:TIGR00568
EMBL:AB548892 PIR:T39405 RefSeq:NP_596553.3 GeneID:2539935
HOGENOM:HOG000215431 OrthoDB:EOG4PG98Z NextBio:20801078
Uniprot:O60066
Length = 302
Score = 223 (83.6 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 70 WK-FYE---EDIATLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDA 125
W+ +Y E I G+T ++ +KLRW TLG Q+DW+ + Y P
Sbjct: 109 WRRYYNGDGESIIDGLGETKPLTVDRLVHKKLRWVTLGEQYDWTTKEYPDPSKSPGFPKD 168
Query: 126 LCQLARRLAAPAMPIGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAI 185
L ++ + ++ EAAIVN++ E D + P++S+S+G I
Sbjct: 169 LGDFVEKVVKESTDF-LHWKAEAAIVNFYSPGDTLSAHIDESEEDLTLPLISLSMGLDCI 227
Query: 186 FLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRI 224
+L+G +SR + P A+ L SGD V+M G +R+ FH VP+I
Sbjct: 228 YLIGTESRSEKPSALRLHSGDVVIMTGTSRKAFHAVPKI 266
Score = 39 (18.8 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 13 TSFPQPPNRTNHNAFY 28
T P N+TN + FY
Sbjct: 84 TQIQDPENKTNLSPFY 99
>WB|WBGene00021783 [details] [associations]
symbol:Y51H7C.5 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR005123 PROSITE:PS51471 GO:GO:0016706
Pfam:PF13532 GeneTree:ENSGT00390000004599 EMBL:FO081466
RefSeq:NP_493969.4 ProteinModelPortal:E0DBL0 SMR:E0DBL0
EnsemblMetazoa:Y51H7C.5.1 EnsemblMetazoa:Y51H7C.5.2 GeneID:190176
KEGG:cel:CELE_Y51H7C.5 CTD:190176 WormBase:Y51H7C.5 OMA:HAIPCIG
Uniprot:E0DBL0
Length = 359
Score = 208 (78.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 48/147 (32%), Positives = 84/147 (57%)
Query: 79 TLRGKTCKSVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAM 138
TL GK + ++L + LRW TLG+++DW+ + Y + + +P+ L QL L + ++
Sbjct: 166 TLHGKDVLT-DPTLLTKGLRWTTLGVEYDWNSKEYPPN--GRPVPEELYQLGN-LISRSL 221
Query: 139 PIGEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKS-REDPP 197
+G+ +P+A I+NY+ E + P++SMSLG AI+L G +PP
Sbjct: 222 KLGD-MKPDATILNYYPPKSALSPHVDKSERS-AAPLISMSLGQTAIYLSGTIDLSSEPP 279
Query: 198 LAMFLRSGDAVLMAGEARECFHGVPRI 224
+ ++LR+GD ++M G+ R +H +P I
Sbjct: 280 IPIWLRNGDFLIMHGDQRLVYHAIPCI 306
Score = 44 (20.5 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 2 EEQSKWIRESLTSFPQPPNRTN 23
E+ + W++ + + +PPN TN
Sbjct: 144 EKSTMWMKRAF-KYAEPPNITN 164
>ASPGD|ASPL0000011493 [details] [associations]
symbol:AN3958 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
PROSITE:PS51471 EMBL:BN001302 GO:GO:0016706 Pfam:PF13532
EnsemblFungi:CADANIAT00004735 OMA:AWHGVPK Uniprot:C8V5Z2
Length = 359
Score = 186 (70.5 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 48/137 (35%), Positives = 69/137 (50%)
Query: 91 SVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAI 150
SVL +KLRW TLG Q+DW+ + Y P P+ + +L R A P E +PEAAI
Sbjct: 188 SVLTKKLRWVTLGGQYDWTAKEYPAERP-PAFPEDIAELLRA----AFP---ETEPEAAI 239
Query: 151 VNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLM 210
+N + E + ++S+S GC +FL+ + LRSGDAV M
Sbjct: 240 LNLYSPGNTLSPHRDVSE-ECDAGLISVSFGCDGLFLISHDDGAGCEIIR-LRSGDAVYM 297
Query: 211 AGEARECFHGVPRIFTD 227
G +R +H VP+I +
Sbjct: 298 DGTSRFAWHAVPKILPE 314
>UNIPROTKB|P05050 [details] [associations]
symbol:alkB species:83333 "Escherichia coli K-12"
[GO:0051213 "dioxygenase activity" evidence=IDA] [GO:0070989
"oxidative demethylation" evidence=IDA] [GO:0080111 "DNA
demethylation" evidence=IDA] [GO:0051747 "cytosine C-5 DNA
demethylase activity" evidence=IDA] [GO:0043734
"DNA-N1-methyladenine dioxygenase activity" evidence=IDA]
[GO:0042245 "RNA repair" evidence=IDA] [GO:0035553 "oxidative
single-stranded RNA demethylation" evidence=IDA] [GO:0035552
"oxidative single-stranded DNA demethylation" evidence=IDA]
[GO:0035515 "oxidative RNA demethylase activity" evidence=IDA]
[GO:0006307 "DNA dealkylation involved in DNA repair" evidence=IDA]
[GO:0008198 "ferrous iron binding" evidence=IDA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471 GO:GO:0008198
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006307 GO:GO:0016702 EMBL:M10315
EMBL:U00008 EMBL:J02607 eggNOG:COG3145 GO:GO:0042245 Pfam:PF13532
TIGRFAMs:TIGR00568 GO:GO:0051747 GO:GO:0043734 GO:GO:0035552
PIR:A24605 RefSeq:NP_416716.1 RefSeq:YP_490450.1 PDB:2FD8 PDB:2FDF
PDB:2FDG PDB:2FDH PDB:2FDI PDB:2FDJ PDB:2FDK PDB:3BI3 PDB:3BIE
PDB:3BKZ PDB:3I2O PDB:3I3M PDB:3I3Q PDB:3I49 PDB:3KHB PDB:3KHC
PDB:3O1M PDB:3O1O PDB:3O1P PDB:3O1R PDB:3O1S PDB:3O1T PDB:3O1U
PDB:3O1V PDB:3T3Y PDB:3T4H PDB:3T4V PDBsum:2FD8 PDBsum:2FDF
PDBsum:2FDG PDBsum:2FDH PDBsum:2FDI PDBsum:2FDJ PDBsum:2FDK
PDBsum:3BI3 PDBsum:3BIE PDBsum:3BKZ PDBsum:3I2O PDBsum:3I3M
PDBsum:3I3Q PDBsum:3I49 PDBsum:3KHB PDBsum:3KHC PDBsum:3O1M
PDBsum:3O1O PDBsum:3O1P PDBsum:3O1R PDBsum:3O1S PDBsum:3O1T
PDBsum:3O1U PDBsum:3O1V PDBsum:3T3Y PDBsum:3T4H PDBsum:3T4V
ProteinModelPortal:P05050 SMR:P05050 DIP:DIP-9085N IntAct:P05050
MINT:MINT-1258339 EnsemblBacteria:EBESCT00000002153
EnsemblBacteria:EBESCT00000002154 EnsemblBacteria:EBESCT00000017253
GeneID:12932924 GeneID:946708 KEGG:ecj:Y75_p2173 KEGG:eco:b2212
PATRIC:32119783 EchoBASE:EB0036 EcoGene:EG10037
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
BioCyc:EcoCyc:EG10037-MONOMER BioCyc:ECOL316407:JW2200-MONOMER
BioCyc:MetaCyc:EG10037-MONOMER EvolutionaryTrace:P05050
Genevestigator:P05050 GO:GO:0035515 GO:GO:0035553 Uniprot:P05050
Length = 216
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 42/126 (33%), Positives = 60/126 (47%)
Query: 97 LRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPA-MPIGEEFQPEAAIVNYFX 155
L W T + +S + + P +P + L +R A A P +FQP+A ++N +
Sbjct: 67 LGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYP---DFQPDACLINRYA 123
Query: 156 XXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEAR 215
E D PIVS+SLG AIF GG R DP + L GD V+ GE+R
Sbjct: 124 PGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR 183
Query: 216 ECFHGV 221
+HG+
Sbjct: 184 LFYHGI 189
>UNIPROTKB|G4MZ21 [details] [associations]
symbol:MGG_01363 "Oxidoreductase" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR005123 PROSITE:PS51471 GO:GO:0005829 GO:GO:0005634
GO:GO:0006281 GO:GO:0016706 Pfam:PF13532 EMBL:CM001232
RefSeq:XP_003714295.1 ProteinModelPortal:G4MZ21
EnsemblFungi:MGG_01363T0 GeneID:2679141 KEGG:mgr:MGG_01363
Uniprot:G4MZ21
Length = 353
Score = 169 (64.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 87 SVKASVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQP 146
S+K V+ R+L W TLG Q+DW+ R Y P K PD +A + +
Sbjct: 174 SMK-QVMDRRLHWVTLGGQYDWTNRVYPEEEPPKFPPD--------VAGFLETVFPDTIA 224
Query: 147 EAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLG----GK-SREDPP---- 197
+AAIVN++ E + K +VS+SLGC +F++ GK S E+ P
Sbjct: 225 QAAIVNFYTPGDTMMMHRDVSE-ETDKGLVSLSLGCDGLFMIAPSDIGKMSEEERPEDVK 283
Query: 198 ---LAMFLRSGDAVLMAGEARECFHGVPRI 224
L + LRSGDA+ M E+R +HGVP++
Sbjct: 284 KQYLLLRLRSGDAIYMIKESRYAWHGVPKV 313
>TIGR_CMR|SPO_0042 [details] [associations]
symbol:SPO_0042 "alkylated DNA repair protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0016491 "oxidoreductase activity" evidence=ISS]
InterPro:IPR005123 PROSITE:PS51471 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016706 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG RefSeq:YP_165315.1
ProteinModelPortal:Q5LWJ7 GeneID:3194568 KEGG:sil:SPO0042
PATRIC:23373315 ProtClustDB:CLSK2308420 Uniprot:Q5LWJ7
Length = 198
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 141 GEEFQPEAAIVNYFXXXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAM 200
G++ P+ ++NY+ EAD + P+VS+SLG A+F +G SR ++
Sbjct: 93 GQDRAPDCCLINYYGEGARMGLHQDRDEADLTWPVVSLSLGDDALFRIGNTSRGGKTESV 152
Query: 201 FLRSGDAVLMAGEARECFHGVPRI 224
+L SGD V+M G AR +HG+ RI
Sbjct: 153 WLNSGDVVVMGGPARLIYHGIDRI 176
>UNIPROTKB|P37462 [details] [associations]
symbol:alkB "Alpha-ketoglutarate-dependent dioxygenase
AlkB" species:99287 "Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2" [GO:0006307 "DNA dealkylation involved in DNA
repair" evidence=ISS] [GO:0042245 "RNA repair" evidence=ISS]
[GO:0043734 "DNA-N1-methyladenine dioxygenase activity"
evidence=ISS] [GO:0051747 "cytosine C-5 DNA demethylase activity"
evidence=ISS] [GO:0070989 "oxidative demethylation" evidence=ISS]
[GO:0080111 "DNA demethylation" evidence=ISS] InterPro:IPR005123
PROSITE:PS51471 GO:GO:0046872 GO:GO:0006307 EMBL:AE006468
GenomeReviews:AE006468_GR GO:GO:0016702 eggNOG:COG3145
GO:GO:0070989 GO:GO:0042245 Pfam:PF13532 GO:GO:0051747
GO:GO:0043734 HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG
ProtClustDB:PRK15401 EMBL:D90221 PIR:B39433 RefSeq:NP_461207.1
ProteinModelPortal:P37462 SMR:P37462 GeneID:1253786
KEGG:stm:STM2264 PATRIC:32383137 Uniprot:P37462
Length = 216
Score = 153 (58.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 40/126 (31%), Positives = 59/126 (46%)
Query: 97 LRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIG-EEFQPEAAIVNYFX 155
L W T + ++ R+ P +P + + R+ A A G FQP+A ++N +
Sbjct: 67 LGWTTDRHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAA---GYASFQPDACLINRYA 123
Query: 156 XXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEAR 215
E D PIVS+SLG A+F GG R DP + L GD V+ GE+R
Sbjct: 124 PGAKLSLHQDKDEPDLRAPIVSVSLGVPAVFQFGGLRRSDPIQRILLEHGDIVVWGGESR 183
Query: 216 ECFHGV 221
+HG+
Sbjct: 184 LFYHGI 189
>UNIPROTKB|Q880N6 [details] [associations]
symbol:alkB "DNA alkylation damage repair protein AlkB"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005123
PROSITE:PS51471 GO:GO:0016706 EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG3145 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
RefSeq:NP_792910.1 ProteinModelPortal:Q880N6 DNASU:1184775
GeneID:1184775 KEGG:pst:PSPTO_3118 PATRIC:19997609
BioCyc:PSYR223283:GJIX-3167-MONOMER Uniprot:Q880N6
Length = 228
Score = 153 (58.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 43/125 (34%), Positives = 57/125 (45%)
Query: 97 LRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFXX 156
L W T + +S + P +PDA QLA+ A A G F P+A ++N +
Sbjct: 79 LGWITDRHGYRYSDVDPQTGQPWPAMPDAFMQLAQSAALAAGYRG--FVPDACLINRYIP 136
Query: 157 XXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARE 216
E D P+VS+SLG AIF GG R D + L GD V+ GE R
Sbjct: 137 GAKMSLHQDKDEHDHRWPVVSVSLGIPAIFQFGGMQRSDKTRRISLFHGDVVVWGGEDRL 196
Query: 217 CFHGV 221
FHG+
Sbjct: 197 RFHGI 201
>UNIPROTKB|Q4KB70 [details] [associations]
symbol:alkB "Alkylated DNA repair protein AlkB"
species:220664 "Pseudomonas protegens Pf-5" [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=ISS] InterPro:IPR005123 PROSITE:PS51471
GO:GO:0016706 GO:GO:0016702 EMBL:CP000076 GenomeReviews:CP000076_GR
eggNOG:COG3145 Pfam:PF13532 HOGENOM:HOG000122276 KO:K03919
OMA:DRLRFHG ProtClustDB:PRK15401 RefSeq:YP_260513.1
ProteinModelPortal:Q4KB70 SMR:Q4KB70 STRING:Q4KB70 DNASU:3476301
GeneID:3476301 KEGG:pfl:PFL_3408 PATRIC:19876147
BioCyc:PFLU220664:GIX8-3423-MONOMER Uniprot:Q4KB70
Length = 226
Score = 150 (57.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/123 (35%), Positives = 60/123 (48%)
Query: 102 LGLQFDWSKRNYNVSLPHKKIP-DALCQLARRLA-APAMPIG-EEFQPEAAIVNYFXXXX 158
LG D S Y+ P + P AL ++ + LA A A G F P++ ++N +
Sbjct: 80 LGWTTDRSGYRYSPIDPQSQRPWPALPKVFQELAEAAAEAAGFPGFAPDSCLINCYRPGA 139
Query: 159 XXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECF 218
E D+S PIVS+SLG AIFL GG+ R D + L GD V+ G R +
Sbjct: 140 KMSLHQDKNERDYSAPIVSLSLGLPAIFLFGGRQRSDKSQRVALLHGDVVVWGGVDRLRY 199
Query: 219 HGV 221
HGV
Sbjct: 200 HGV 202
>UNIPROTKB|Q48JG4 [details] [associations]
symbol:alkB "Alkylated DNA repair protein AlkB"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR005123 PROSITE:PS51471
GO:GO:0003684 GO:GO:0006281 GO:GO:0016706 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG3145 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
RefSeq:YP_274464.1 ProteinModelPortal:Q48JG4 SMR:Q48JG4
STRING:Q48JG4 GeneID:3557833 KEGG:psp:PSPPH_2255 PATRIC:19973761
Uniprot:Q48JG4
Length = 228
Score = 143 (55.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 41/126 (32%), Positives = 57/126 (45%)
Query: 96 KLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFX 155
+L W T + ++ + L +PD QLA+ AA A E F P+A ++N +
Sbjct: 78 QLGWITDRHGYRYTATDPQTGLVWPAMPDVFMQLAKD-AAHAAGYAE-FMPDACLINRYI 135
Query: 156 XXXXXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEAR 215
E D P+VS+SLG A F GG R D + L GD V+ GE R
Sbjct: 136 PGAKMSLHQDKNEYDHRWPVVSVSLGIPATFQFGGLLRSDKTQRISLFHGDVVVWGGEDR 195
Query: 216 ECFHGV 221
FHG+
Sbjct: 196 LRFHGI 201
>UNIPROTKB|Q0C209 [details] [associations]
symbol:alkB "Alkylated DNA repair protein AlkB"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003684
"damaged DNA binding" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR005123 PROSITE:PS51471 GO:GO:0003684
GO:GO:0006281 GO:GO:0016706 eggNOG:COG3145 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
EMBL:CP000158 GenomeReviews:CP000158_GR RefSeq:YP_760234.1
ProteinModelPortal:Q0C209 SMR:Q0C209 STRING:Q0C209 GeneID:4289592
KEGG:hne:HNE_1522 PATRIC:32215871
BioCyc:HNEP228405:GI69-1555-MONOMER Uniprot:Q0C209
Length = 216
Score = 138 (53.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 99 WCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFXXXX 158
W T + + + P +P++ LA A A F+P+ ++N +
Sbjct: 72 WVTDRTGYHYDATDPETGKPWHPMPESFMALAVFAATEAGYC--RFRPDTCLINRYEPGA 129
Query: 159 XXXXXXXXMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECF 218
E +++ PIVS+SLG A F GG R DP LR GD + G +R C
Sbjct: 130 KLSLHQDRNEREFAHPIVSVSLGLPATFQFGGLRRADPIRKYALRHGDVAVWGGPSRLCH 189
Query: 219 HGV 221
HGV
Sbjct: 190 HGV 192
>TAIR|locus:2087452 [details] [associations]
symbol:AT3G14160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR005123
PROSITE:PS51471 EMBL:CP002686 GO:GO:0016706 GO:GO:0016702
Pfam:PF13532 EMBL:AP000600 IPI:IPI00541399 RefSeq:NP_566479.5
UniGene:At.8249 ProteinModelPortal:Q9LJH2 SMR:Q9LJH2 PRIDE:Q9LJH2
EnsemblPlants:AT3G14160.1 GeneID:820633 KEGG:ath:AT3G14160
TAIR:At3g14160 HOGENOM:HOG000122277 InParanoid:Q9LJH2
PhylomeDB:Q9LJH2 ProtClustDB:CLSN2684917 Genevestigator:Q9LJH2
Uniprot:Q9LJH2
Length = 455
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 146 PEAAIVNYFXXXXXXXXXXXXMEADWS--K--PIVSMSLGCKAIFLLGGKSREDPPLAMF 201
P+ IVN++ E++ S K P+VS S+G A FL G + ED +
Sbjct: 346 PDICIVNFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQRDEDKAETLT 405
Query: 202 LRSGDAVLMAGEARECFHGVPRIFTD 227
L SGD +L G +R+ FHGV I D
Sbjct: 406 LESGDVLLFGGRSRKVFHGVRSIRKD 431
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 265 231 0.00084 113 3 11 22 0.38 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 607 (65 KB)
Total size of DFA: 206 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.77u 0.13s 16.90t Elapsed: 00:00:01
Total cpu time: 16.77u 0.13s 16.90t Elapsed: 00:00:01
Start: Fri May 10 14:18:56 2013 End: Fri May 10 14:18:57 2013