Query 024582
Match_columns 265
No_of_seqs 217 out of 1037
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 10:46:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024582.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024582hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3q_A Alpha-ketoglutarate-dep 100.0 1.3E-36 4.4E-41 268.0 15.4 157 86-264 45-202 (211)
2 3s57_A Alpha-ketoglutarate-dep 100.0 5.9E-32 2E-36 236.7 11.5 137 95-265 56-203 (204)
3 3tht_A Alkylated DNA repair pr 100.0 1.7E-31 6E-36 250.5 11.3 166 92-264 145-312 (345)
4 2iuw_A Alkylated repair protei 100.0 1E-30 3.5E-35 233.7 9.9 131 102-265 88-230 (238)
5 3lfm_A Protein FTO; FAT MASS a 95.8 0.016 5.3E-07 55.8 7.0 76 145-221 188-299 (495)
6 2rg4_A Uncharacterized protein 91.2 0.71 2.4E-05 39.7 8.1 77 144-225 100-193 (216)
7 2rdq_A 1-deoxypentalenic acid 84.7 1.5 5.2E-05 38.2 6.0 25 197-224 210-234 (288)
8 2opw_A Phyhd1 protein; double- 84.7 2.2 7.7E-05 37.2 7.1 25 197-224 227-251 (291)
9 2a1x_A Phytanoyl-COA dioxygena 79.1 5.5 0.00019 35.0 7.6 26 196-224 214-239 (308)
10 2fct_A Syringomycin biosynthes 73.8 9.9 0.00034 33.4 7.8 26 197-225 219-244 (313)
11 3kt7_A PKHD-type hydroxylase T 70.4 10 0.00035 37.9 7.5 77 145-226 123-215 (633)
12 2jig_A Prolyl-4 hydroxylase; h 70.1 9.7 0.00033 32.2 6.6 101 125-227 78-206 (224)
13 3dkq_A PKHD-type hydroxylase S 61.7 5.5 0.00019 35.0 3.4 73 147-227 99-184 (243)
14 3gja_A CYTC3; halogenase, beta 56.3 19 0.00065 32.2 6.1 25 197-224 221-245 (319)
15 2hbt_A EGL nine homolog 1; pro 52.8 42 0.0014 29.0 7.6 68 149-223 119-199 (247)
16 4gjz_A Lysine-specific demethy 40.5 26 0.00088 28.7 4.0 65 149-221 124-221 (235)
17 2xdv_A MYC-induced nuclear ant 30.7 1.4E+02 0.0049 28.1 7.9 75 122-210 121-211 (442)
18 3itq_A Prolyl 4-hydroxylase, a 27.9 76 0.0026 26.9 5.0 96 123-227 89-201 (216)
19 1vrb_A Putative asparaginyl hy 24.9 3.7E+02 0.013 24.0 9.4 54 153-211 146-231 (342)
20 3lwc_A Uncharacterized protein 22.8 1E+02 0.0034 23.2 4.4 53 154-220 47-99 (119)
21 4diq_A Lysine-specific demethy 21.6 2.3E+02 0.0079 27.2 7.5 82 125-222 148-249 (489)
22 3emr_A ECTD; double stranded b 21.1 39 0.0013 30.0 1.9 25 197-224 229-253 (310)
No 1
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=100.00 E-value=1.3e-36 Score=267.97 Aligned_cols=157 Identities=31% Similarity=0.501 Sum_probs=134.1
Q ss_pred cccchh-hhhhceeeeeecceeecCCCcccCCCCCCCchHHHHHHHHHHhhccCCCCCCCCCCeEEeeecCCCCCCCccc
Q 024582 86 KSVKAS-VLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHL 164 (265)
Q Consensus 86 ~~~~~~-~ll~klRW~tlG~~ydw~~~~y~~~~~~~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~gd~lg~H~ 164 (265)
+.++++ ....+|.|++-+..|.|++..+....+|++||++|.+|+++++..+ ++..|.||+||||+|++|++|+||+
T Consensus 45 ~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~~P~~L~~l~~~~~~~~--g~~~~~pn~~LvN~Y~~G~~i~~H~ 122 (211)
T 3i3q_A 45 YTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAA--GYPDFQPDACLINRYAPGAKLSLHQ 122 (211)
T ss_dssp CBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCCCCCHHHHHHHHHHHHHT--TCTTCCCCEEEEEEECTTCCEEEEC
T ss_pred CcCchhhcccccceeecCCCCcCcCCCccCCCCCCCchHHHHHHHHHHHHHhc--CCCCcCCCEEEEEEEcCCCCccccc
Confidence 344553 3456899999888899998885555689999999999999998765 4467899999999999999999999
Q ss_pred CCCCcCCCCCeEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccccCCCccccCCchhhhhhhhcccCCCc
Q 024582 165 DDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRIFTDRENAEIASLDLQFSHED 244 (265)
Q Consensus 165 D~~e~~~~~PIvSlSLG~~~iF~~~~~~~~~~~~~i~L~sGdllvM~G~sR~~~HgVPki~~~~~~~~~~~~~~~~~~~~ 244 (265)
|..|.+++.||+|||||++|+|.|+++++.+...++.|++||+|||+|++|+|+||||+++.++.+.
T Consensus 123 D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~------------- 189 (211)
T 3i3q_A 123 DKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPL------------- 189 (211)
T ss_dssp CCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTT-------------
T ss_pred CCCccccCCCEEEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEeccCcccCCcCCC-------------
Confidence 9655456789999999999999999987777889999999999999999999889999998875431
Q ss_pred hhhhhhccCCceeEEEeecc
Q 024582 245 DHFFLEYIRNSRININIRQV 264 (265)
Q Consensus 245 ~~~~~~y~~~~RINiTfRqV 264 (265)
+++.|||||||++
T Consensus 190 -------~~~~RIsLTFR~~ 202 (211)
T 3i3q_A 190 -------TIDCRYNLTFRQA 202 (211)
T ss_dssp -------TBTCEEEEEEECC
T ss_pred -------CCCCEEEEEeeec
Confidence 3689999999987
No 2
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.97 E-value=5.9e-32 Score=236.74 Aligned_cols=137 Identities=21% Similarity=0.295 Sum_probs=114.5
Q ss_pred hceeeeee-cceeecCCCcccCCCCCCCchHHHHHHHHHHhhccCCCCCCCCCCeEEeeecCCCC-CCCcccCCC-CcCC
Q 024582 95 RKLRWCTL-GLQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLGD-TLGGHLDDM-EADW 171 (265)
Q Consensus 95 ~klRW~tl-G~~ydw~~~~y~~~~~~~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~gd-~lg~H~D~~-e~~~ 171 (265)
|+..|..- |..|+|+.+.+.. .|||++|..|++++++.+ ++.||+||||+|++|+ +||||+|++ +.+.
T Consensus 56 R~~~wyg~~~~~Y~Ysg~~~~~----~pwp~~L~~l~~~~~~~~-----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~ 126 (204)
T 3s57_A 56 RKQATYGDAGLTYTFSGLTLSP----KPWIPVLERIRDHVSGVT-----GQTFNFVLINRYKDGSDHICEHRDDERELAP 126 (204)
T ss_dssp SEEEEEECTTCCEEETTEEECC----EECCHHHHHHHHHHHHHH-----CCCCSEEEEEEESSTTCCEEEECCCCTTBCT
T ss_pred cEEEEECCCCCCcccCCCcccC----CCCCHHHHHHHHHHHHHh-----CCCCceeEEEEECCCCCcccceecChhhccC
Confidence 34567663 4789999998853 478999999999997654 4789999999999995 999999995 4456
Q ss_pred CCCeEEEecCCceEEEeecCC-------CCCCCEEEEcCCCcEEEEccccccc-ccCCCccccCCchhhhhhhhcccCCC
Q 024582 172 SKPIVSMSLGCKAIFLLGGKS-------REDPPLAMFLRSGDAVLMAGEAREC-FHGVPRIFTDRENAEIASLDLQFSHE 243 (265)
Q Consensus 172 ~~PIvSlSLG~~~iF~~~~~~-------~~~~~~~i~L~sGdllvM~G~sR~~-~HgVPki~~~~~~~~~~~~~~~~~~~ 243 (265)
+.+|+|||||++|+|.|+++. +......+.|++||+|||+|++|.. +||||++...
T Consensus 127 ~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~---------------- 190 (204)
T 3s57_A 127 GSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKV---------------- 190 (204)
T ss_dssp TCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTC----------------
T ss_pred CCcEEEEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccCCC----------------
Confidence 889999999999999999753 2235789999999999999999875 5999998653
Q ss_pred chhhhhhccCCceeEEEeeccC
Q 024582 244 DDHFFLEYIRNSRININIRQVF 265 (265)
Q Consensus 244 ~~~~~~~y~~~~RINiTfRqV~ 265 (265)
.+.|||||||+|+
T Consensus 191 ---------~~~RislTFR~i~ 203 (204)
T 3s57_A 191 ---------LAPRVNLTFRKIL 203 (204)
T ss_dssp ---------CSCEEEEEEECBC
T ss_pred ---------CCCEEEEEeeeec
Confidence 5899999999985
No 3
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.97 E-value=1.7e-31 Score=250.50 Aligned_cols=166 Identities=20% Similarity=0.291 Sum_probs=114.4
Q ss_pred hhhhceeeeeecceeecCCCcccCCCCC-CCchHHHHHHHHHHhhccCCCCCCCCCCeEEeeecCCCCCCCcccCCCCcC
Q 024582 92 VLLRKLRWCTLGLQFDWSKRNYNVSLPH-KKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD 170 (265)
Q Consensus 92 ~ll~klRW~tlG~~ydw~~~~y~~~~~~-~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~gd~lg~H~D~~e~~ 170 (265)
..+.++|++++|+.|+|+++.+....++ .+||++|..|++++++.. +.++.||+||||+|++|++|+||+|+++.
T Consensus 145 ~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~l~~r~~~~~---~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~- 220 (345)
T 3tht_A 145 KSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKG---YIKHKPDQMTINQYEPGQGIPAHIDTHSA- 220 (345)
T ss_dssp -----CEEECCC------------------CCCHHHHHHHHHHHHHT---SCSSCCSEEEEEEECTTCCEEEECCCTTT-
T ss_pred ccccCceEEEECCcccccccccccCCCCCcCcCHHHHHHHHHHHhcc---cCCCCCCEEEEEEecCCCCEeeccCCchh-
Confidence 4456677888999999999998765554 469999999999987532 33689999999999999999999999875
Q ss_pred CCCCeEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccc-cCCCccccCCchhhhhhhhcccCCCchhhhh
Q 024582 171 WSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECF-HGVPRIFTDRENAEIASLDLQFSHEDDHFFL 249 (265)
Q Consensus 171 ~~~PIvSlSLG~~~iF~~~~~~~~~~~~~i~L~sGdllvM~G~sR~~~-HgVPki~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (265)
++.+|+|||||++|+|.|+++. +...++.|++||||||+|++|+.| ||||+++.++.+.........++.+.. ...
T Consensus 221 ~~~~I~slSLG~~~~f~f~~~~--~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~-~~~ 297 (345)
T 3tht_A 221 FEDEIVSLSLGSEIVMDFKHPD--GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVG-DLT 297 (345)
T ss_dssp BCSCEEEEEESSCEEEEEECTT--SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSS-CEE
T ss_pred cCCeEEEEECCCceeEEEccCC--CceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCC-Cce
Confidence 6689999999999999999853 457899999999999999999877 999999999876544322111111100 000
Q ss_pred hccCCceeEEEeecc
Q 024582 250 EYIRNSRININIRQV 264 (265)
Q Consensus 250 ~y~~~~RINiTfRqV 264 (265)
--.++.|||||||.|
T Consensus 298 ~~~r~~RiSlT~R~v 312 (345)
T 3tht_A 298 LSKRGLRTSFTFRKV 312 (345)
T ss_dssp EEECCCEEEEEEECB
T ss_pred eccCCCEEEEEEEec
Confidence 113789999999987
No 4
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.97 E-value=1e-30 Score=233.69 Aligned_cols=131 Identities=22% Similarity=0.382 Sum_probs=107.3
Q ss_pred ec-ceeecCCCcccCCCCCCCchHHHHHHHHHHhhccCCCCCCCCCCeEEeeecCCC-CCCCcccCCCCc-CCCCCeEEE
Q 024582 102 LG-LQFDWSKRNYNVSLPHKKIPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLG-DTLGGHLDDMEA-DWSKPIVSM 178 (265)
Q Consensus 102 lG-~~ydw~~~~y~~~~~~~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~g-d~lg~H~D~~e~-~~~~PIvSl 178 (265)
+| +.|+|+...+.. ..+||++|..|++++++.+ +..||+||||+|++| |+|+||+|++.. ..+.+|+||
T Consensus 88 ~g~~~Y~Ys~~~~~~---~p~wp~~l~~l~~~~~~~~-----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~Iasl 159 (238)
T 2iuw_A 88 YGELPYTYSRITMEP---NPHWHPVLRTLKNRIEENT-----GHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASL 159 (238)
T ss_dssp EECCCTTSCHHHHCC---BSSCCHHHHHHHHHHHHHH-----SCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEE
T ss_pred cCCCccccCCcccCC---CCCCCHHHHHHHHHHHHHh-----CCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEE
Confidence 44 567777665532 3489999999999887654 468999999999999 699999999743 334789999
Q ss_pred ecCCceEEEeecCCCC--------CCCEEEEcCCCcEEEEcccccccc-cCCCccccCCchhhhhhhhcccCCCchhhhh
Q 024582 179 SLGCKAIFLLGGKSRE--------DPPLAMFLRSGDAVLMAGEARECF-HGVPRIFTDRENAEIASLDLQFSHEDDHFFL 249 (265)
Q Consensus 179 SLG~~~iF~~~~~~~~--------~~~~~i~L~sGdllvM~G~sR~~~-HgVPki~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (265)
|||++|+|.|+++... ...++|.|++||||||+|++|+.| ||||++..
T Consensus 160 SLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~----------------------- 216 (238)
T 2iuw_A 160 SFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYH----------------------- 216 (238)
T ss_dssp EEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSS-----------------------
T ss_pred ECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCC-----------------------
Confidence 9999999999986541 357899999999999999998766 99998753
Q ss_pred hccCCceeEEEeeccC
Q 024582 250 EYIRNSRININIRQVF 265 (265)
Q Consensus 250 ~y~~~~RINiTfRqV~ 265 (265)
.++.|||||||+|.
T Consensus 217 --~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 217 --SREPRVNLTFRTVY 230 (238)
T ss_dssp --CCCCEEEEEEECCC
T ss_pred --CCCCEEEEEeeecc
Confidence 26899999999973
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=95.82 E-value=0.016 Score=55.84 Aligned_cols=76 Identities=26% Similarity=0.334 Sum_probs=51.2
Q ss_pred CCCeEEeeecCC--------------C-CCCCcccCCCCcCCCCCeE--EEecCC---------------ceEEEeecC-
Q 024582 145 QPEAAIVNYFGL--------------G-DTLGGHLDDMEADWSKPIV--SMSLGC---------------KAIFLLGGK- 191 (265)
Q Consensus 145 ~p~a~ivN~Y~~--------------g-d~lg~H~D~~e~~~~~PIv--SlSLG~---------------~~iF~~~~~- 191 (265)
.+|..||||+.+ | -.+|||.|..-.+. .+|+ |.|-.. ++++.+|=+
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~-StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglki 266 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDR-SAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKI 266 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTT-CCEEEEEEECCC-------------CCTTSEEEEEEE
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccC-cceEEEEeecCCccccccccccCCCCCccceeEeeee
Confidence 789999999876 3 46899999864433 4555 555532 344555432
Q ss_pred --CCCCCCEEEEcCCCcEEEEcccc-cccccCC
Q 024582 192 --SREDPPLAMFLRSGDAVLMAGEA-RECFHGV 221 (265)
Q Consensus 192 --~~~~~~~~i~L~sGdllvM~G~s-R~~~HgV 221 (265)
.-..+.+.|.|++||++.|-+.- ....|+|
T Consensus 267 awDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~V 299 (495)
T 3lfm_A 267 SWDIETPGLAIPLHQGDCYFMLDDLNATHQHCV 299 (495)
T ss_dssp TTCCSSCEEEEEECTTCEEEECTTHHHHEEEEE
T ss_pred cccCCCCceeeecCCCCeeeecchhhhhhhhhh
Confidence 12345789999999999998765 4444554
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.22 E-value=0.71 Score=39.67 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=47.0
Q ss_pred CCCCeEEeeecCCCCCCCcccCCCCcCCCCCeEEEecCC-ceEEEeecCC----------CCC-----CC-EEEEcCCCc
Q 024582 144 FQPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGC-KAIFLLGGKS----------RED-----PP-LAMFLRSGD 206 (265)
Q Consensus 144 ~~p~a~ivN~Y~~gd~lg~H~D~~e~~~~~PIvSlSLG~-~~iF~~~~~~----------~~~-----~~-~~i~L~sGd 206 (265)
+....+-+|.|++|+.-..|.|.... . ..++=|+... ...+.|.... ..+ .+ ..+..+.|+
T Consensus 100 ~~i~~~W~~~~~~G~~~~~H~H~~~~-l-SgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~ 177 (216)
T 2rg4_A 100 LRLEDIWINILPEGGVHGSHIHPHSV-I-SGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGD 177 (216)
T ss_dssp CEEEEEEEEEECTTCCEEEECCTTCS-E-EEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTE
T ss_pred eEEeeEEEEEcCCCCcccCccCCCCe-E-EEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCe
Confidence 34456899999999999999995321 1 2233344421 2233333211 001 22 378889999
Q ss_pred EEEEcccccccccCCCccc
Q 024582 207 AVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 207 llvM~G~sR~~~HgVPki~ 225 (265)
+||+ +|. .+|+|+...
T Consensus 178 lvlF--pS~-l~H~V~p~~ 193 (216)
T 2rg4_A 178 VLLW--ESW-LRHEVPMNM 193 (216)
T ss_dssp EEEE--ETT-SCEEECCCC
T ss_pred EEEE--CCC-CEEeccCCC
Confidence 9999 454 779998764
No 7
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=84.74 E-value=1.5 Score=38.15 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=19.1
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcc
Q 024582 197 PLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 197 ~~~i~L~sGdllvM~G~sR~~~HgVPki 224 (265)
.+.+.++.||++|+.+ ..+||-...
T Consensus 210 ~v~~~~~aGdv~lf~~---~~~H~s~~N 234 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHA---HMCHKSIPN 234 (288)
T ss_dssp EECCCCCTTCEEEEET---TCCEEEECC
T ss_pred eeecccCCCCEEEEeC---CceecCCCC
Confidence 3577889999999999 366776543
No 8
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=84.71 E-value=2.2 Score=37.16 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=20.1
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcc
Q 024582 197 PLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 197 ~~~i~L~sGdllvM~G~sR~~~HgVPki 224 (265)
.+.+.++.||++|+.+. .+||....
T Consensus 227 ~v~~~~~aGd~~~f~~~---~~H~s~~N 251 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGE---VVHKSKQN 251 (291)
T ss_dssp CEEECBCTTCEEEEETT---CEEEECCB
T ss_pred eeecccCCCcEEEEcCC---ceecCCCC
Confidence 56789999999999994 67876544
No 9
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=79.07 E-value=5.5 Score=35.04 Aligned_cols=26 Identities=19% Similarity=0.367 Sum_probs=20.5
Q ss_pred CCEEEEcCCCcEEEEcccccccccCCCcc
Q 024582 196 PPLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 196 ~~~~i~L~sGdllvM~G~sR~~~HgVPki 224 (265)
..+.+.++.||++++.+. .+|+-...
T Consensus 214 ~~v~~~~~aGd~vlf~~~---~~H~s~~N 239 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPL---LIHGSGQN 239 (308)
T ss_dssp CCEEECBCTTCEEEECTT---CCEEECCB
T ss_pred CeEEccCCCccEEEECCC---ccccCCCC
Confidence 457899999999999993 66776543
No 10
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=73.79 E-value=9.9 Score=33.36 Aligned_cols=26 Identities=12% Similarity=0.216 Sum_probs=20.4
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCccc
Q 024582 197 PLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 197 ~~~i~L~sGdllvM~G~sR~~~HgVPki~ 225 (265)
.+.+.++.||++++.+. .+||-....
T Consensus 219 ~v~~~~~aGd~v~f~~~---l~H~s~~N~ 244 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWST---LMHASYPHS 244 (313)
T ss_dssp CEEECBCTTEEEEEETT---SEEEECCBC
T ss_pred eeEeeeCCceEEEEeCC---ceeeCCCCC
Confidence 46789999999999994 677765544
No 11
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=70.43 E-value=10 Score=37.88 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=48.6
Q ss_pred CCCeEEeeecCCCCCCCcccCCCCcCCCCCeEEE--ecCC----------ceEEEeecCC----CCCCCEEEEcCCCcEE
Q 024582 145 QPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSM--SLGC----------KAIFLLGGKS----REDPPLAMFLRSGDAV 208 (265)
Q Consensus 145 ~p~a~ivN~Y~~gd~lg~H~D~~e~~~~~PIvSl--SLG~----------~~iF~~~~~~----~~~~~~~i~L~sGdll 208 (265)
.++ +-++.|.+|+.+..|.|..+ ++ .+|+ -|-. .+.-++.... ..+....|.-..|.++
T Consensus 123 ~~D-~~~a~Y~~G~fL~~H~D~~~---~R-rvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV 197 (633)
T 3kt7_A 123 KTD-MSINTYTKGCHLLTHDDVIG---SR-RISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIA 197 (633)
T ss_dssp CCC-EEEEEECTTCEEEEECCCCT---TE-EEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEE
T ss_pred cee-EEEEEeCCCCeeeecCCCCC---Ce-EEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEE
Confidence 455 66789999999999999632 12 2222 2211 1122222111 1234567888999999
Q ss_pred EEcccccccccCCCcccc
Q 024582 209 LMAGEARECFHGVPRIFT 226 (265)
Q Consensus 209 vM~G~sR~~~HgVPki~~ 226 (265)
+|.-.-...||+|+.+..
T Consensus 198 ~F~vsp~~S~H~V~eV~~ 215 (633)
T 3kt7_A 198 FFKVLPGFSFHDXEEVKV 215 (633)
T ss_dssp EEECCTTTCCEEECCBCS
T ss_pred EEEcCCCCCcCCCCccCC
Confidence 998764567899999875
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=70.13 E-value=9.7 Score=32.15 Aligned_cols=101 Identities=19% Similarity=0.242 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCeEEeeecCCCCCCCcccCCCCcC-------CCCCeEEEec-------CCceEEEeec
Q 024582 125 ALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD-------WSKPIVSMSL-------GCKAIFLLGG 190 (265)
Q Consensus 125 ~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~gd~lg~H~D~~e~~-------~~~PIvSlSL-------G~~~iF~~~~ 190 (265)
.+..|.++|....+ .+-...+..-|+.|..|+.-.+|.|..... ...-++++-| |..-+|-...
T Consensus 78 ~~~~i~~ri~~~~g--l~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~ 155 (224)
T 2jig_A 78 VISKIEKRVAQVTM--IPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAE 155 (224)
T ss_dssp HHHHHHHHHHHHHT--CCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSS
T ss_pred HHHHHHHHHHHHhC--CCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcc
Confidence 46667777765442 222334567888999999999999974321 1122444332 3333442110
Q ss_pred CC-C-------CCCCEEEEcCCCcEEEEc-----ccc-cccccCCCccccC
Q 024582 191 KS-R-------EDPPLAMFLRSGDAVLMA-----GEA-RECFHGVPRIFTD 227 (265)
Q Consensus 191 ~~-~-------~~~~~~i~L~sGdllvM~-----G~s-R~~~HgVPki~~~ 227 (265)
.. . ....+++..+.|++|++- |.. ...+|++-.+..+
T Consensus 156 ~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G 206 (224)
T 2jig_A 156 QKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKG 206 (224)
T ss_dssp SCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEES
T ss_pred cccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccc
Confidence 00 0 012578999999999994 444 5667988887654
No 13
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=61.71 E-value=5.5 Score=34.96 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=45.7
Q ss_pred CeEEeeecCCCCCCCcccCCCCcCCC----CCeEE----Eec-----CCceEEEeecCCCCCCCEEEEcCCCcEEEEccc
Q 024582 147 EAAIVNYFGLGDTLGGHLDDMEADWS----KPIVS----MSL-----GCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGE 213 (265)
Q Consensus 147 ~a~ivN~Y~~gd~lg~H~D~~e~~~~----~PIvS----lSL-----G~~~iF~~~~~~~~~~~~~i~L~sGdllvM~G~ 213 (265)
+...++.|.+|+..++|.|....... .-++| ||= |..-+|.-. .....+.++.|++|++...
T Consensus 99 e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~-----~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 99 YPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT-----YGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET-----TEEEEECCCTTCEEEEETT
T ss_pred ccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC-----CCcEEEecCCCEEEEECCC
Confidence 44889999999999999998632110 11222 222 112222210 1246788999999999754
Q ss_pred ccccccCCCccccC
Q 024582 214 ARECFHGVPRIFTD 227 (265)
Q Consensus 214 sR~~~HgVPki~~~ 227 (265)
..|+|-++..+
T Consensus 174 ---~lH~v~pV~~G 184 (243)
T 3dkq_A 174 ---SLHQVTPVLSG 184 (243)
T ss_dssp ---SEEEECCEEEE
T ss_pred ---CeEcCcccccc
Confidence 46999888654
No 14
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=56.31 E-value=19 Score=32.18 Aligned_cols=25 Identities=24% Similarity=0.408 Sum_probs=17.4
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcc
Q 024582 197 PLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 197 ~~~i~L~sGdllvM~G~sR~~~HgVPki 224 (265)
.+.+.++.||+|++.+. .+||-...
T Consensus 221 ~v~~~~~aGd~v~f~~~---~~H~s~~N 245 (319)
T 3gja_A 221 AYPMVLKPGEAVIFWSN---TMHASLPH 245 (319)
T ss_dssp CCBCCBCTTEEEEEETT---SCEEECCC
T ss_pred eeEeeECCCeEEEEcCC---ccccCCCC
Confidence 45677899999999984 45554443
No 15
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=52.83 E-value=42 Score=29.02 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=41.2
Q ss_pred EEeeecCC-CCCCCcccCCCCcCCCCCeEEEec-----------CCc-eEEEeecCCCCCCCEEEEcCCCcEEEEccccc
Q 024582 149 AIVNYFGL-GDTLGGHLDDMEADWSKPIVSMSL-----------GCK-AIFLLGGKSREDPPLAMFLRSGDAVLMAGEAR 215 (265)
Q Consensus 149 ~ivN~Y~~-gd~lg~H~D~~e~~~~~PIvSlSL-----------G~~-~iF~~~~~~~~~~~~~i~L~sGdllvM~G~sR 215 (265)
+-+..|.+ |+...+|.|.... ..-.+|+-| |.. ++| .. .+.....|....|.+|+|... +
T Consensus 119 ~~~~~Y~~~G~~y~~H~D~~~~--~~R~~T~vlYLN~~w~~~~~GG~l~~~---~~-~~~~~~~v~P~~grlv~F~s~-~ 191 (247)
T 2hbt_A 119 AMVACYPGNGTGYVRHVDNPNG--DGRCVTCIYYLNKDWDAKVSGGILRIF---PE-GKAQFADIEPKFDRLLFFWSD-R 191 (247)
T ss_dssp EEEEEECSSSCCEEEECSSCSC--CSEEEEEEEECBTTCCHHHHBCCEEEC---CT-TCSSCEEECCBTTEEEEEECS-T
T ss_pred EEEEEecCCCCcccccccCCCC--CCceEEEEEEeCCCCCCCCCceeEEEe---cC-CCCceEEEEcCCCEEEEEecC-C
Confidence 56678885 9999999998421 111332221 211 222 11 123457888899999999743 3
Q ss_pred ccccCCCc
Q 024582 216 ECFHGVPR 223 (265)
Q Consensus 216 ~~~HgVPk 223 (265)
..+|+|-+
T Consensus 192 ~~~H~V~p 199 (247)
T 2hbt_A 192 RNPHEVQP 199 (247)
T ss_dssp TCCEEECC
T ss_pred Cceeeecc
Confidence 36798865
No 16
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=40.46 E-value=26 Score=28.75 Aligned_cols=65 Identities=23% Similarity=0.353 Sum_probs=41.5
Q ss_pred EEeeec-C-CCCCCCcccCCCCcCCCCCeEEEecCCceEEEeecCCC-------------------------------CC
Q 024582 149 AIVNYF-G-LGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSR-------------------------------ED 195 (265)
Q Consensus 149 ~ivN~Y-~-~gd~lg~H~D~~e~~~~~PIvSlSLG~~~iF~~~~~~~-------------------------------~~ 195 (265)
.-+|.| . .|..-..|.|..+. ++..=-|..+..+|-+... ..
T Consensus 124 ~~~~~wiG~~gs~t~~H~D~~~n-----~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~ 198 (235)
T 4gjz_A 124 ITINAWFGPQGTISPLHQDPQQN-----FLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKA 198 (235)
T ss_dssp CEEEEEEECTTCEEEEECCSSEE-----EEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGC
T ss_pred cceEEEEeCCCCCceeeeccccc-----eEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCC
Confidence 345544 3 34566679997542 4444558887777654210 01
Q ss_pred CCEEEEcCCCcEEEEcccccccccCC
Q 024582 196 PPLAMFLRSGDAVLMAGEARECFHGV 221 (265)
Q Consensus 196 ~~~~i~L~sGdllvM~G~sR~~~HgV 221 (265)
..+.+.|++||+|.+= +.|||.|
T Consensus 199 ~~~~~~l~pGD~LyiP---~gW~H~V 221 (235)
T 4gjz_A 199 PFLSCILSPGEILFIP---VKYWHYV 221 (235)
T ss_dssp CCEEEEECTTCEEEEC---TTCEEEE
T ss_pred CcEEEEECCCCEEEeC---CCCcEEE
Confidence 3578999999999994 3588987
No 17
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=30.67 E-value=1.4e+02 Score=28.09 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCCCeEEeeecCCC-CC--CCcccCCCCcCCCCCeEEEecCCceEEEeecCC------
Q 024582 122 IPDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLG-DT--LGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS------ 192 (265)
Q Consensus 122 ~P~~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~g-d~--lg~H~D~~e~~~~~PIvSlSLG~~~iF~~~~~~------ 192 (265)
+|+ |..+++.+.+.. ++ .+.+|.|-.. .+ ++.|.|..+. ++--=-|..+.-++.+..
T Consensus 121 ~p~-L~~l~~~l~~~~-----g~---~~~~n~y~~~~g~~g~~~H~D~~dv-----f~~Qv~G~Krw~l~~p~~pl~~~~ 186 (442)
T 2xdv_A 121 KDE-LWRIQEKLECYF-----GS---LVGSNVYITPAGSQGLPPHYDDVEV-----FILQLEGEKHWRLYHPTVPLAREY 186 (442)
T ss_dssp CHH-HHHHHHHHHHHH-----TS---CCEEEEEEECTTCBCSCSEECSSEE-----EEEEEESCEEEEEECCSSTTCSSC
T ss_pred hhH-HHHHHHHHHHHh-----CC---CcccceEECCCCCCCccceECCcce-----EEEEEEeEEEEEEccCCCCccccC
Confidence 454 446777776543 12 3447777643 44 4599997542 333333544444333321
Q ss_pred -------CCCCCEEEEcCCCcEEEE
Q 024582 193 -------REDPPLAMFLRSGDAVLM 210 (265)
Q Consensus 193 -------~~~~~~~i~L~sGdllvM 210 (265)
-......+.|++||+|.|
T Consensus 187 s~d~~~~~~~~~~~~~L~pGD~LYi 211 (442)
T 2xdv_A 187 SVEAEERIGRPVHEFMLKPGDLLYF 211 (442)
T ss_dssp EECCTTTSCSCSEEEEECTTCEEEE
T ss_pred CCCchhhcCCcceEEEECCCcEEEE
Confidence 012356899999999988
No 18
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=27.91 E-value=76 Score=26.93 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHhhccCCCCCCCCCCeEEeeecCCCCCCCcccCCCCcC----CCCCeEEEec-------CCceEEEeecC
Q 024582 123 PDALCQLARRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD----WSKPIVSMSL-------GCKAIFLLGGK 191 (265)
Q Consensus 123 P~~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~gd~lg~H~D~~e~~----~~~PIvSlSL-------G~~~iF~~~~~ 191 (265)
.+.+..|.++++...+ ..-...+..-|..|.+|+.-.+|.|..... ...-++++-| |....|.
T Consensus 89 ~~~v~~i~~Ri~~~~g--l~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp---- 162 (216)
T 3itq_A 89 NELTAKIEKRISSIMN--VPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFP---- 162 (216)
T ss_dssp CHHHHHHHHHHHHHHT--SCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEET----
T ss_pred cHHHHHHHHHHHHhcC--ceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEec----
Confidence 4556677777766542 211234667888899999999999975321 1112333221 2222221
Q ss_pred CCCCCCEEEEcCCCcEEEEccc-----c-cccccCCCccccC
Q 024582 192 SREDPPLAMFLRSGDAVLMAGE-----A-RECFHGVPRIFTD 227 (265)
Q Consensus 192 ~~~~~~~~i~L~sGdllvM~G~-----s-R~~~HgVPki~~~ 227 (265)
...+++..+.|++|++-.- . ...+|++-.+..+
T Consensus 163 ---~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G 201 (216)
T 3itq_A 163 ---KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKG 201 (216)
T ss_dssp ---TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEES
T ss_pred ---CCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccc
Confidence 1257889999999999752 2 2457888777654
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=24.86 E-value=3.7e+02 Score=24.00 Aligned_cols=54 Identities=17% Similarity=0.197 Sum_probs=33.6
Q ss_pred ecCC-CCCCCcccCCCCcCCCCCeEEEecCCceEEEe-ecCC------------------------------CCCCCEEE
Q 024582 153 YFGL-GDTLGGHLDDMEADWSKPIVSMSLGCKAIFLL-GGKS------------------------------REDPPLAM 200 (265)
Q Consensus 153 ~Y~~-gd~lg~H~D~~e~~~~~PIvSlSLG~~~iF~~-~~~~------------------------------~~~~~~~i 200 (265)
|..+ |.+.+.|.|..+. ++.-=-|..+.-++ .+.. .......+
T Consensus 146 ~~gp~g~~~~~H~D~~dn-----fl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (342)
T 1vrb_A 146 YAAKNGGGFKAHFDAYTN-----LIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIV 220 (342)
T ss_dssp EEECSSCCCCSEECSSEE-----EEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEE
T ss_pred EEeCCCCCCCCeECChhc-----EEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEE
Confidence 4455 6899999997542 33333465555555 2110 01235789
Q ss_pred EcCCCcEEEEc
Q 024582 201 FLRSGDAVLMA 211 (265)
Q Consensus 201 ~L~sGdllvM~ 211 (265)
.|++||+|.|=
T Consensus 221 ~L~pGD~LyiP 231 (342)
T 1vrb_A 221 NLTPGTMLYLP 231 (342)
T ss_dssp EECTTCEEEEC
T ss_pred EECCCcEEEeC
Confidence 99999999983
No 20
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=22.79 E-value=1e+02 Score=23.21 Aligned_cols=53 Identities=13% Similarity=0.255 Sum_probs=35.2
Q ss_pred cCCCCCCCcccCCCCcCCCCCeEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccccC
Q 024582 154 FGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHG 220 (265)
Q Consensus 154 Y~~gd~lg~H~D~~e~~~~~PIvSlSLG~~~iF~~~~~~~~~~~~~i~L~sGdllvM~G~sR~~~Hg 220 (265)
..+|..+.+|.+..|. ++-++ | ...+.+++ -.+.|+.||++.+-..+.+.|..
T Consensus 47 ~~pG~~~~~H~~~~E~-----~~Vl~-G-~~~~~~~g-------~~~~l~~GD~v~ip~g~~H~~~~ 99 (119)
T 3lwc_A 47 YAPGQSLTETMAVDDV-----MIVLE-G-RLSVSTDG-------ETVTAGPGEIVYMPKGETVTIRS 99 (119)
T ss_dssp ECTTCEEEEECSSEEE-----EEEEE-E-EEEEEETT-------EEEEECTTCEEEECTTCEEEEEE
T ss_pred ECCCCCcCccCCCCEE-----EEEEe-C-EEEEEECC-------EEEEECCCCEEEECCCCEEEEEc
Confidence 4678889999744442 44444 3 44555532 24789999999999888766643
No 21
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=21.55 E-value=2.3e+02 Score=27.24 Aligned_cols=82 Identities=22% Similarity=0.212 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCeEEeeecCC--C-CCCCcccCCCCcCCCCCeEEEecCCceEEEeecCC---------
Q 024582 125 ALCQLARRLAAPAMPIGEEFQPEAAIVNYFGL--G-DTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS--------- 192 (265)
Q Consensus 125 ~L~~L~~~l~~~~~~~~~~~~p~a~ivN~Y~~--g-d~lg~H~D~~e~~~~~PIvSlSLG~~~iF~~~~~~--------- 192 (265)
.|..++..+....+ + .+-+|.|-. | .+++.|.|..+. ++-==.|..+.-++.+..
T Consensus 148 ~l~~l~~~Le~~fg-----~---~v~~N~Y~tp~Gs~g~~pH~D~~Dv-----FllQv~G~KrWrL~~P~~~~~~lp~~~ 214 (489)
T 4diq_A 148 TVWQFLAVLQEQFG-----S---MAGSNVYLTPPNSQGFAPHYDDIEA-----FVLQLEGRKLWRVYRPRAPTEELALTS 214 (489)
T ss_dssp HHHHHHHHHHHHHT-----S---CEEEEEEEECSSBCCSCCBCCSSEE-----EEEEEEECEEEEEECCSSGGGTTCSSC
T ss_pred HHHHHHHHHHHHhC-----C---cccceEEecCCCcccccCccCCcce-----EEEEEeeEEEEEEeCCCCccccCCCcc
Confidence 36666666654331 1 355687853 3 467799998642 222223443333333211
Q ss_pred --------CCCCCEEEEcCCCcEEEEcccccccccCCC
Q 024582 193 --------REDPPLAMFLRSGDAVLMAGEARECFHGVP 222 (265)
Q Consensus 193 --------~~~~~~~i~L~sGdllvM~G~sR~~~HgVP 222 (265)
.......+.|++||+|.|=-- |||.+-
T Consensus 215 ~~~~~~~~~~~p~~e~~L~pGDvLYiP~g---~~H~~~ 249 (489)
T 4diq_A 215 SPNFSQDDLGEPVLQTVLEPGDLLYFPRG---FIHQAE 249 (489)
T ss_dssp CCCCCGGGCCCCSEEEEECTTCEEEECTT---CEEEEE
T ss_pred cccCCcccccCcceEEEECCCCEEEECCC---CceEEE
Confidence 013356899999999998643 555443
No 22
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=21.10 E-value=39 Score=29.99 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=19.1
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcc
Q 024582 197 PLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 197 ~~~i~L~sGdllvM~G~sR~~~HgVPki 224 (265)
.+.+.++.||+++|.+. .+||-...
T Consensus 229 ~v~~~~~aGdvl~f~~~---~~H~s~~N 253 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESN---TMHGSTSN 253 (310)
T ss_dssp CBCCCBSTTCEEEEETT---CCEEECCC
T ss_pred eEEeeeCCceEEEEeCC---ceecCCCC
Confidence 46678999999999994 66765443
Done!