BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024588
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 135/222 (60%), Gaps = 6/222 (2%)
Query: 43 TRRYLATVVRAQQ--RPTWLPGVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELV 100
T R TV A RP W PG PPP+LDG+L GDFGFDPLGL DPESLRW QAELV
Sbjct: 50 TARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELV 109
Query: 101 HARFAMAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKR 160
H R+AM G AGI +LL GI P WY AG E+ F T TLFIV+L+L+G+AE +R
Sbjct: 110 HCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEY-FTDTTTLFIVELVLIGWAEGRR 168
Query: 161 YMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAK-DIRNAREWKLKEIKNG 219
+ D I PG + F L G + GYPGG +PLG +E + KEIKNG
Sbjct: 169 WADIIKPGCVNTDPIF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNG 226
Query: 220 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 261
RLAM+A++G + Q T GPIDN+ HL+DP H TI +
Sbjct: 227 RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 207 bits (526), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 152/245 (62%), Gaps = 18/245 (7%)
Query: 29 IGITSAFLPAKSGTTRRYLA----------TVVRAQQRPTWLPGVDPPPYLDGTLAGDFG 78
G+ S FL SG R +A + ++ WLPG+ P YL G+L GD G
Sbjct: 16 CGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNG 75
Query: 79 FDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEAGAVEFK 138
FDPLGL EDPE+LRW+VQAELV+ R+AM GVAG+L ++ GI +P WY AG E+
Sbjct: 76 FDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEY- 134
Query: 139 FASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNP 198
FAS+ TLF+++ +L + E +R+ D +PGS ++ F + +L E GYPGG + NP
Sbjct: 135 FASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPAGEVGYPGG-IFNP 191
Query: 199 LGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQ 258
L A + E K KEI NGRLAM+A LG +Q +VT GP DN+L+H+SDPWH TI+Q
Sbjct: 192 LNFAPTL----EAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQ 247
Query: 259 TLANS 263
TL +
Sbjct: 248 TLGGN 252
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 144/249 (57%), Gaps = 15/249 (6%)
Query: 25 NKSSIGITSA-FLPAKSGTTRRYLA----------TVVRAQQRPTWLPGVDPPPYLDGTL 73
N S +G T A FL K +++A V RP W PG PP +LDG+L
Sbjct: 23 NGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSL 82
Query: 74 AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEAG 133
GDFGFDPLGLG DPESL+W QAELVH+R+AM G AGI + L G+ P WY AG
Sbjct: 83 PGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAG 142
Query: 134 AVEFKFASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGG 193
E+ F T TLF+++L+L+G+AE +R+ D I PG + F L G + GYPGG
Sbjct: 143 EQEY-FTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIF--PNNKLTGTDVGYPGG 199
Query: 194 PLLNPLGLAK-DIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPW 252
+PLG +E + KEIKNGRLAM+A++G + Q T GPIDN+ HL+DP
Sbjct: 200 LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPG 259
Query: 253 HKTIIQTLA 261
H TI +
Sbjct: 260 HATIFAAFS 268
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 141/206 (68%), Gaps = 8/206 (3%)
Query: 55 QRPTWLPGVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILF 114
++ WLPG+ P YL G+LAGD GFDPLGL EDPE+L+W+VQAELV+ R+AM GVAG+L
Sbjct: 53 KKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLL 112
Query: 115 TDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEG 174
++ GI +P WY+AG ++ FAS+ TLF+++ +L + E +R+ D +PGS ++
Sbjct: 113 PEVFTKIGIINVPEWYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 171
Query: 175 SFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQAS 234
F + +L E GYPGG + NPL A +E K KE+ NGRLAM+A LG VQ +
Sbjct: 172 IF--KQYSLPKGEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHN 224
Query: 235 VTHVGPIDNILEHLSDPWHKTIIQTL 260
VT GP +N+L+HLSDPWH TI+QT
Sbjct: 225 VTGKGPFENLLQHLSDPWHNTIVQTF 250
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 159 KRYMDYISPGSQTKEGSFFGLEAA----LEGL-EPGYPGGPL-----LNPLGLAKDIRNA 208
R + + S GS K SF +EA L GL P Y G L +PLGLA+D N
Sbjct: 31 NRDLSFTSIGSSAKTSSF-KVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL 89
Query: 209 REWKLKEIKNGRLAMVAMLGIFVQASVTHVGPID 242
+ + E+ NGR AM+ + G+ + T +G I+
Sbjct: 90 KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIIN 123
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 181 bits (458), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 135/226 (59%), Gaps = 17/226 (7%)
Query: 50 VVRAQQRPTWLPGVDPPPYLDGTLAGDFGFDPLGLGEDPESL------RWYVQAELVHAR 103
V + R W YLDG L GDFGFDPLGL DPE +W E+++ R
Sbjct: 47 VKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGR 105
Query: 104 FAMAGVAGILFTDLLRVTGI---RELPVWYEAGAVE-----FKFASTRTLFIVQLLLMGF 155
FAM G AG + ++L G+ W++ G + +A TLF++++ LMGF
Sbjct: 106 FAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGF 165
Query: 156 AETKRYMDYISPGSQTKEGSFFGLEAALEGL-EPGYPGGPLLNPLGLAKDIRNAREWKLK 214
AE +R+ D+ PGS K+ F GLE L G +P YPGGPL NPLG KD ++ +E KLK
Sbjct: 166 AEHRRFQDWAKPGSMGKQ-YFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLK 224
Query: 215 EIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTL 260
EIKNGRLAM+A+LG F+QA VT VGP N+L+HL+DP + ++ +L
Sbjct: 225 EIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSL 270
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 150/275 (54%), Gaps = 33/275 (12%)
Query: 11 LQPSSSSSFICNDVNKSSIGITSAFLPAKSGTTRRYLATVVRAQ----------QRPTWL 60
L SSS +F V +S + LP+ G +R+ L VRA RP W
Sbjct: 6 LVSSSSLTFAAEAVRQS---FRARSLPSSVGCSRKGL---VRAAATPPVKQGGVDRPLWF 59
Query: 61 PGVDPPPYLDGTLAGDFGFDPLGLGEDPESL------RWYVQAELVHARFAMAGVAGILF 114
YLDG+L GD+GFDPLGL DPE RW E+++ RFAM G G +
Sbjct: 60 ASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIA 118
Query: 115 TDLLRVTGI---RELPVWYEAGAVE-----FKFASTRTLFIVQLLLMGFAETKRYMDYIS 166
+ L G+ W++ G + +A TLF++++ LMGFAE +R+ D+
Sbjct: 119 PEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK 178
Query: 167 PGSQTKEGSFFGLEAALEGL-EPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVA 225
PGS K+ F GLE G P YPGGP NPLG KD ++ +E KLKE+KNGRLAM+A
Sbjct: 179 PGSMGKQ-YFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLA 237
Query: 226 MLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTL 260
+LG F+Q VT VGP N+L+H++DP + ++ +L
Sbjct: 238 ILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 134/225 (59%), Gaps = 10/225 (4%)
Query: 37 PAKSGTTRRYLATVVRAQQRPTWLPGVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQ 96
PA SG+ R V Q + +WLPG+ P YLDG+L GD GFDPL L EDPE LRW+VQ
Sbjct: 15 PAASGSPRSTRRDVA-VQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQ 73
Query: 97 AELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFA 156
A++V+ R+AM GVAG+L ++L G+ P W E FAS+ T V + +
Sbjct: 74 ADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YV 132
Query: 157 ETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEI 216
E +R+ D +PGS ++ F +L E GYPG + NPL A E K KE+
Sbjct: 133 EIRRWQDIKNPGSVNQDPIFKSY--SLPPHECGYPGR-VFNPLNFA-----PLENKEKEL 184
Query: 217 KNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 261
NGRLAM+A LG VQ +V GP +N+ +HL+DPWH TIIQT++
Sbjct: 185 ANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTIS 229
>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum
lycopersicum GN=CAP10B PE=3 SV=1
Length = 256
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 129/250 (51%), Gaps = 51/250 (20%)
Query: 16 SSSFICNDVNKSSIGITSAFLPAKSGTTRRYLATVVRAQQRPTWLPGVDP------PPYL 69
SSSF+ K + + A + A+ T +R++ + +W+P V P +L
Sbjct: 14 SSSFLTG--GKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWL 71
Query: 70 DGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW 129
DG+L GDFGFDPLGLG+DP L+WY +AEL+H R+AMA V GI +GI W
Sbjct: 72 DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW--SGIP----W 125
Query: 130 YEAGA-----VEFKFASTRTLFIVQLLLMGFAETKRYMDYI----------SPGSQTKE- 173
+EAGA F F S L QLLLMG+ E+KR++D+ +P S+T E
Sbjct: 126 FEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAEN 182
Query: 174 -GSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNA---------REWKLKEIKNGRLAM 223
+F G E GYPGG +PL LA + N KL EIK+ RLAM
Sbjct: 183 FANFTG--------EQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAM 234
Query: 224 VAMLGIFVQA 233
+AML + +A
Sbjct: 235 LAMLIFYFEA 244
>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum
lycopersicum GN=CAP10A PE=3 SV=1
Length = 256
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 126/239 (52%), Gaps = 28/239 (11%)
Query: 16 SSSFICNDVNKSSIGITSAFLPAKSGTTRRYLATVVRAQQRPTWLPGVD------PPPYL 69
SSSF+ NKS + + G TV+ A + +W+P V P +L
Sbjct: 13 SSSFLTGG-NKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWL 71
Query: 70 DGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW 129
DG+L GD+GFDPLGLG+DP L+WY +AEL+H R+AMA V GI +GI W
Sbjct: 72 DGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW--SGIP----W 125
Query: 130 YEAGAVEFKFA--STRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGL- 186
+EAGA A S TL QL+LMG+ E+KR++D+ P SQ+ E + + A
Sbjct: 126 FEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFAN 185
Query: 187 ---EPGYPGGPLLNPLGLAKDIRNA---------REWKLKEIKNGRLAMVAMLGIFVQA 233
E GYPGG +PL LA + N K+ EIK+ RLAM+AML + +A
Sbjct: 186 FTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEA 244
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 110/204 (53%), Gaps = 31/204 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLL-RVTG 122
D P YL G GD+G+D GL DP++ Y + EL+HAR+A+ G GIL +LL + G
Sbjct: 49 DTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAG 108
Query: 123 IR-ELPVWYEAGAVEFKFASTRTL--------------FIVQLLLMGFAETKRYMDYISP 167
++ PVW++AGA F L VQ++LMG AE R
Sbjct: 109 VQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANG---- 164
Query: 168 GSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAML 227
G E L+ L+ YPGGP +PLGLA D E K+KEIKNGRLAM + L
Sbjct: 165 ----------GSEGFLDDLDTLYPGGPF-DPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213
Query: 228 GIFVQASVTHVGPIDNILEHLSDP 251
G FVQA VT GP+ N+ +HL+DP
Sbjct: 214 GFFVQAIVTGKGPVQNLTDHLADP 237
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 112/216 (51%), Gaps = 28/216 (12%)
Query: 49 TVVRAQQRPTWLPGVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAG 108
V R + W+PG P YLDG+ GDFGFDPLGLGE P +L Y ++EL+H R+AM
Sbjct: 38 NVGRIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLA 97
Query: 109 VAGILFTDLLRVTGIRELPVW--YEAGAVEF-----KFASTRTLFIVQLLLMGFAETKRY 161
V GIL + L + W G + + + T+ ++ L + F E +R
Sbjct: 98 VPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRS 157
Query: 162 MDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRL 221
M+ + K+ YPGG +PLG +KD + E K+KEIKNGRL
Sbjct: 158 MEK---DPEKKK----------------YPGG-AFDPLGYSKDPKKLEELKVKEIKNGRL 197
Query: 222 AMVAMLGIFVQASV-THVGPIDNILEHLSDPWHKTI 256
A++A +G VQ S GP++N+ HL+DPWH I
Sbjct: 198 ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 134/297 (45%), Gaps = 80/297 (26%)
Query: 20 ICNDVNKSSIGITSAFLPAKSGTTRRYLATVVRAQQRPTWLPGVDPPPYLDGTLAGDFGF 79
+ +D++ +S T+ F + + TV+ RP W PG P YLDG+L GD+GF
Sbjct: 18 VVSDISSNSSRFTARFGFGTKKASPKKAKTVI--SDRPLWFPGAKSPEYLDGSLVGDYGF 75
Query: 80 DPLGLGE--------------------------------DPES-----------LRWYVQ 96
DP GLG+ DP+S L+ + +
Sbjct: 76 DPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRE 135
Query: 97 AELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFAST----------RTLF 146
EL+H R+AM G + + L TG+ W +AG VE S+ TL
Sbjct: 136 CELIHGRWAMLATLGAITVEWL--TGV----TWQDAGKVELVDGSSYLGQPLPFSISTLI 189
Query: 147 IVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIR 206
+++L++G+ E +R A L+ + YPGG +PLGLA D
Sbjct: 190 WIEVLVIGYIEFQR-------------------NAELDSEKRLYPGGKFFDPLGLASDPV 230
Query: 207 NAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLANS 263
+ +L EIK+ RLAMV LG VQA+ T GP++N HLSDP H TII T ++S
Sbjct: 231 KKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 122/245 (49%), Gaps = 32/245 (13%)
Query: 20 ICNDVNKSSIGITSAFLPAKSGTTRRYLATVVRAQQRPTWLPGVDPPPYLDGTLAGDFGF 79
+C S+ +A +P G T + R W+PG P YLDG+ GDFGF
Sbjct: 14 VCPSFLSSTKSKFAAAMPVYVGATN----FMSRFSMSADWMPGQPRPSYLDGSAPGDFGF 69
Query: 80 DPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW--YEAGAVEF 137
D LGLGE P +L Y ++EL+H R+AM V GI+ + L + + W G +
Sbjct: 70 DSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATY 129
Query: 138 -----KFASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPG 192
+ + T+ ++ L + F E +R M+ S+ K+ YPG
Sbjct: 130 LGQPVPWGTLPTILAIEFLAIAFVEHQRSMEK---DSEKKK----------------YPG 170
Query: 193 GPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASV-THVGPIDNILEHLSDP 251
G +PLG +KD E K+KEIKNGRLA++A++G VQ S GP++N+ HL+DP
Sbjct: 171 G-AFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADP 229
Query: 252 WHKTI 256
WH I
Sbjct: 230 WHNNI 234
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 66 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRE 125
P YL+G +AGD+G+DP GLG+ PE+ Y EL+HAR+AM G AG + + L G
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 126 LP--VWYEAGAVEFKFASTRTL-FIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAA 182
P VW++ GA+ TL + + + + + G++ ++ +
Sbjct: 142 GPEAVWFKTGAL---LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAE-----YYRITNG 193
Query: 183 LEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPID 242
L+ + +PGGP +PLGLAKD K+KEIKNGRLAM AMLG F+QA VT GP++
Sbjct: 194 LDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVE 252
Query: 243 NILEHLSDPWHKTIIQTLANS 263
N+ +HLSDP+ ++ +A +
Sbjct: 253 NLAKHLSDPFGNNLLTVIAGT 273
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 116/227 (51%), Gaps = 34/227 (14%)
Query: 42 TTRRYLATVVRAQQRPTWL-PGVDP-PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAEL 99
T + ++ RP +L P D P YL G GD+G+D GL DPE+ + E+
Sbjct: 40 TVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 99
Query: 100 VHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRT 144
+H R+AM G G +F ++L G++ VW++AG+ F S
Sbjct: 100 IHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILA 159
Query: 145 LFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKD 204
++ Q++LMGF E R G EGL+P YPGG +PLGLA D
Sbjct: 160 IWACQVVLMGFVEGYR----------------VGGGPLGEGLDPIYPGG-AFDPLGLADD 202
Query: 205 IRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
E K+KEIKNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 203 PDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADP 249
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 33/243 (13%)
Query: 27 SSIGITSAFLPA-KSGTT----RRYLATVVRAQQRPTWLPGVDPPPYLDGTLAGDFGFDP 81
S++G+ S P+ +SG + Y T R W PG P +LDG+ GDFGFDP
Sbjct: 11 SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDP 70
Query: 82 LGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW--YEAGAVEF-- 137
LGL PE+ + ++E+ H R+AM V G+L + L + + W G +
Sbjct: 71 LGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLG 130
Query: 138 ---KFASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGP 194
+ + T+ ++ L + FAE +R M+ + K+ YPGG
Sbjct: 131 NPVPWGNLPTILAIEFLAIAFAEQQRTMEK---DPEKKK----------------YPGG- 170
Query: 195 LLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASV-THVGPIDNILEHLSDPWH 253
+PLG +KD E KLKEIKNGRLAM+A +G VQ S GP++N+ HL+DPWH
Sbjct: 171 AFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWH 230
Query: 254 KTI 256
I
Sbjct: 231 NNI 233
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 117/233 (50%), Gaps = 41/233 (17%)
Query: 37 PAKSGTTRRYLATVVRAQQRPTWLP--GVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWY 94
PAKS Y R WL + P YL G GD+G+D GL DPE+ + Y
Sbjct: 31 PAKSAGIEWY------GPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKY 84
Query: 95 VQAELVHARFAMAGVAGILFTDLLRV-TGIR-ELPVWYEAGAVEFKFASTRTL------- 145
+ E++HAR+A+ G GIL +LL G++ PVW++AGA F L
Sbjct: 85 RELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIH 144
Query: 146 -------FIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNP 198
VQ++LMG E R ++ G A EGL+P YPG +P
Sbjct: 145 AQNIVATLAVQVVLMGLIEGYR----VNGGP------------AGEGLDPLYPG-ESFDP 187
Query: 199 LGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
LGLA D E K+KEIKNGRLAM + G FVQA VT GPI N+ +HL+DP
Sbjct: 188 LGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 106/192 (55%), Gaps = 14/192 (7%)
Query: 66 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR- 124
P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G++
Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQF 124
Query: 125 ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGL 179
VW++AGA F + L Q +L +A M I EG G
Sbjct: 125 GEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLI-------EGYRVGG 177
Query: 180 EAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVG 239
EGL+P YPGG +PLGLA D E K+KEIKNGRLAM +M G FVQA VT G
Sbjct: 178 GPLGEGLDPLYPGGAF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
Query: 240 PIDNILEHLSDP 251
PI+N+ +H++DP
Sbjct: 237 PIENLADHIADP 248
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 32/201 (15%)
Query: 66 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR- 124
P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F ++L G++
Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 123
Query: 125 ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPGSQ 170
VW++AGA F S ++ VQ++LMGF E R
Sbjct: 124 GEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR---------- 173
Query: 171 TKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIF 230
G EGL+ YPGG +PLGLA D E K+KE+KNGRLAM +M G F
Sbjct: 174 ------VGGGPLGEGLDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFF 226
Query: 231 VQASVTHVGPIDNILEHLSDP 251
VQA VT GPI+N+ +H++DP
Sbjct: 227 VQAIVTGKGPIENLFDHVADP 247
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 32/201 (15%)
Query: 66 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR- 124
P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F ++L G++
Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 123
Query: 125 ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPGSQ 170
VW++AGA F S ++ VQ++LMGF E R
Sbjct: 124 GEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR---------- 173
Query: 171 TKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIF 230
G EGL+ YPGG +PLGLA D E K+KE+KNGRLAM +M G F
Sbjct: 174 ------VGGGPLGEGLDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFF 226
Query: 231 VQASVTHVGPIDNILEHLSDP 251
VQA VT GPI+N+ +H++DP
Sbjct: 227 VQAIVTGKGPIENLFDHVADP 247
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 73 EPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 132
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AGA F S ++ Q++LMG E R
Sbjct: 133 KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA------ 186
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E +P YPGG +PLGLA+D E K+KEIKNGRLAM +M G
Sbjct: 187 -----GGPLG-----EVTDPIYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 235
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GPI+N+ +HL+DP
Sbjct: 236 FFVQAIVTGKGPIENLADHLADP 258
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 42 TTRRYLATVVRAQQRPTWLPGVDP--PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAEL 99
T R ++ RP +L P YL G GD+G+D + DPE+ + E+
Sbjct: 41 TVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEV 100
Query: 100 VHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLM 153
+H R+AM G G +F +LL G++ VW++AGA F +A L Q +L
Sbjct: 101 IHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILA 160
Query: 154 GFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKL 213
+A M I EG G EGL+P PGG +PLGLA D E K+
Sbjct: 161 IWACQVVLMGLI-------EGYRVGGGTLGEGLDPLLPGGAF-DPLGLADDPEACAELKV 212
Query: 214 KEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
KEIKNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 213 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADP 250
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 106/201 (52%), Gaps = 32/201 (15%)
Query: 66 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIR- 124
P YL G GD+G+D GL DPE+ + E++H+R+AM G G F +LL G++
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKF 125
Query: 125 ELPVWYEAGAVEF--------------KFASTRTLFIVQLLLMGFAETKRYMDYISPGSQ 170
VW++AG+ F S ++ Q++LMGF E R
Sbjct: 126 GEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR---------- 175
Query: 171 TKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIF 230
G EGL+P YPGG +PLGLA D + E K+KE+KNGRLAM +M G F
Sbjct: 176 ------VGGGPLGEGLDPLYPGG-AFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFF 228
Query: 231 VQASVTHVGPIDNILEHLSDP 251
VQA VT GPI N+ +H++DP
Sbjct: 229 VQAIVTGKGPIQNLYDHVADP 249
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 114/227 (50%), Gaps = 34/227 (14%)
Query: 42 TTRRYLATVVRAQQRPTWLP--GVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAEL 99
T + ++ + RP +L P YL G GD+G+D GL DPE+ + E+
Sbjct: 40 TVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 99
Query: 100 VHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRT 144
+H R+AM G G +F ++L G++ VW++AG+ F S
Sbjct: 100 IHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILA 159
Query: 145 LFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKD 204
++ Q++LMGF E R G EGL+ YPGG +PLGLA D
Sbjct: 160 IWACQVVLMGFVEGYR----------------VGGGPLGEGLDKIYPGGAF-DPLGLADD 202
Query: 205 IRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
E K+KEIKNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDP 249
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV 123
Query: 124 R-ELPVWYEAGAVEFK--------------FASTRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ VQ++LMG E R
Sbjct: 124 KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI------- 176
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 177 ----AGGPLG-----EVVDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 227 FFVQAIVTGKGPLENLADHLADP 249
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 113/218 (51%), Gaps = 16/218 (7%)
Query: 42 TTRRYLATVVRAQQRPTWLP--GVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAEL 99
T + ++ + RP +L P YL G GD+G+D GL DPE+ + E+
Sbjct: 40 TVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 99
Query: 100 VHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLM 153
+H R+AM G G +F ++L G++ VW++AG+ F + L Q +L
Sbjct: 100 IHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILA 159
Query: 154 GFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKL 213
+A M I EG G EGL+ YPGG +PLGLA D E K+
Sbjct: 160 VWASQVVLMGLI-------EGYRVGGGPLGEGLDKIYPGGAF-DPLGLADDPEAFAELKV 211
Query: 214 KEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
KEIKNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 249
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 118/262 (45%), Gaps = 78/262 (29%)
Query: 55 QRPTWLPGVDPPPYLDGTLAGDFGFDPLGLGEDPESLRW--------------------- 93
RP W PG P +LDG+L GD+GFDP GLG+ E L++
Sbjct: 54 DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113
Query: 94 ----------------------YVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVWYE 131
+ + EL+H R+AM G L + L TG+ W +
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL--TGV----TWQD 167
Query: 132 AGAVEFKFAST----------RTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEA 181
AG VE S+ TL +++L++G+ E +R A
Sbjct: 168 AGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR-------------------NA 208
Query: 182 ALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPI 241
L+ + YPGG +PLGLA D + +L EIK+ RLAMVA LG VQA+ T GP+
Sbjct: 209 ELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPL 268
Query: 242 DNILEHLSDPWHKTIIQTLANS 263
+N HLSDP H TII T ++S
Sbjct: 269 NNWATHLSDPLHTTIIDTFSSS 290
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 60 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV 119
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ VQ++LMG E R
Sbjct: 120 KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA------ 173
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 174 -----GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 222
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 223 FFVQAIVTGKGPLENLADHLADP 245
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 77 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV 136
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AGA F S ++ Q++LMG E R
Sbjct: 137 KFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVA------ 190
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E +P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 191 -----GGPLG-----EVTDPIYPGGNF-DPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 239
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GPI+N+ +HL+DP
Sbjct: 240 FFVQAIVTGKGPIENLADHLADP 262
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 113/227 (49%), Gaps = 34/227 (14%)
Query: 42 TTRRYLATVVRAQQRPTWLP--GVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAEL 99
T + ++ + RP +L P YL G GD+G+D GL DPE+ + E+
Sbjct: 40 TVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 99
Query: 100 VHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRT 144
+H R+AM G G +F ++L G+ VW++AG+ F S
Sbjct: 100 IHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILA 159
Query: 145 LFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKD 204
++ Q++LMGF E R G EGL+ YPGG +PLGLA D
Sbjct: 160 IWAAQVVLMGFVEGYR----------------VGGGPLGEGLDKIYPGGAF-DPLGLADD 202
Query: 205 IRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
E K+KEIKNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 203 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADP 249
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 108/203 (53%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL+G AGD+G+D GL DPE+ + E++HAR+AM G G L +LL +G+
Sbjct: 67 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGV 126
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AGA F S ++ Q++LMG E R
Sbjct: 127 KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------ 180
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E +P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 181 -----GGPLG-----EVTDPIYPGGSF-DPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 230 FFVQAIVTGKGPLENLNDHLADP 252
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 113/218 (51%), Gaps = 16/218 (7%)
Query: 42 TTRRYLATVVRAQQRPTWLP--GVDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAEL 99
T + ++ + RP +L P YL G GD+G+D GL DPE+ + E+
Sbjct: 12 TVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 71
Query: 100 VHARFAMAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLM 153
+H R+AM G G +F ++L G+ VW++AG+ F + L Q +L
Sbjct: 72 IHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILA 131
Query: 154 GFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKL 213
+A M ++ EG G EGL+ YPGG +PLGLA D E K+
Sbjct: 132 IWASQVVLMGFV-------EGYRVGGGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKV 183
Query: 214 KEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 251
KEIKNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 184 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADP 221
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 107/202 (52%), Gaps = 32/202 (15%)
Query: 66 PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLL-RVTGIR 124
P YL+G GD+G+D GL DPE+ E++H R+AM G G +F ++L + G+
Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVE 126
Query: 125 -ELPVWYEAGAVEF-----------KFASTRTLFIV---QLLLMGFAETKRYMDYISPGS 169
+ PVW++AG+ F +++ V Q+LLMG E R
Sbjct: 127 FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN------- 179
Query: 170 QTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGI 229
GL+ EG + YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 180 --------GLDGVGEGNDL-YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGF 230
Query: 230 FVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL DP
Sbjct: 231 FVQAIVTGKGPLENLFDHLDDP 252
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 77 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV 136
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AGA F S ++ Q++LMG E R
Sbjct: 137 KFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRV------- 189
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E +P YPGG +PLGLA D + K+KEIKNGRLAM +M G
Sbjct: 190 ----AGGPLG-----EVTDPIYPGGNF-DPLGLADDPDAFADVKVKEIKNGRLAMFSMFG 239
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GPI+N+ +HL+DP
Sbjct: 240 FFVQAIVTGKGPIENLADHLADP 262
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 107/194 (55%), Gaps = 14/194 (7%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 124
Query: 124 R-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 177
+ VW++AG+ F + +L Q +L +A M + EG
Sbjct: 125 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV-------EGYRV 177
Query: 178 GLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTH 237
E E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M G FVQA VT
Sbjct: 178 AGEPLGEVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236
Query: 238 VGPIDNILEHLSDP 251
GP++N+ +HL+DP
Sbjct: 237 KGPLENLADHLADP 250
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 63 EAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV 122
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S +++ Q++LMG E R
Sbjct: 123 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVA------ 176
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA+D + E K+KE+KNGRLAM +M G
Sbjct: 177 -----GGPLG-----EIVDPLYPGGSF-DPLGLAEDPERSAELKVKELKNGRLAMFSMFG 225
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 226 FFVQAIVTGKGPLENLADHLADP 248
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 66 EAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 126 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVA------ 179
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E +P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 180 -----GGPLG-----EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP+DN+++HL+DP
Sbjct: 229 FFVQAIVTGKGPLDNLVDHLADP 251
>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia
oleracea PE=2 SV=1
Length = 261
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 116/215 (53%), Gaps = 27/215 (12%)
Query: 40 SGTTRRYLATVVRAQQRPTWLPGVD------PPPYLDGTLAGDFGFDPLGLGEDPESLRW 93
S T+R+ + A + +W+P V P +LDG+L GDFGFDPLGLG+DP L+W
Sbjct: 41 STTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 100
Query: 94 YVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFA--STRTLFIVQLL 151
Y +AEL+H R+AM V GI TGI W+EAGA A S TL QLL
Sbjct: 101 YREAELIHGRWAMLAVLGIFVGQAW--TGIP----WFEAGADPGAVAPFSFGTLLGTQLL 154
Query: 152 LMGFAETKRYMDYISPGSQTKE----GSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRN 207
LMG+ E+KR++D+ P SQ+ E S + E GYPGG +PL LA I N
Sbjct: 155 LMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISN 214
Query: 208 A---------REWKLKEIKNGRLAMVAMLGIFVQA 233
KL EIK+ RLAM+AML + +A
Sbjct: 215 GVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEA 249
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 138 KFASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGY-----PG 192
K +S LF+ + G + T R + ++ + K+ ++ L+P + PG
Sbjct: 23 KKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPG 82
Query: 193 GPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHV 238
+PLGL KD + ++ E+ +GR AM+A+LGIFV + T +
Sbjct: 83 DFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI 128
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 67 ESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGV 126
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 127 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA------ 180
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA D E K+KE+KNGRLAM +M G
Sbjct: 181 -----GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFG 229
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HLSDP
Sbjct: 230 FFVQAIVTGKGPLENLADHLSDP 252
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 104/194 (53%), Gaps = 13/194 (6%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGV 123
Query: 124 R-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 177
+ VW++AG+ F + +L Q +L +A M + EG
Sbjct: 124 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLG 183
Query: 178 GLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTH 237
E L YPGG +PLGLA D E K+KEIKNGRLAM +M G FVQA VT
Sbjct: 184 EAEDLL------YPGGSF-DPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
Query: 238 VGPIDNILEHLSDP 251
GP++N+ +HL+DP
Sbjct: 237 KGPLENLADHLADP 250
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 54 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV 113
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 114 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------ 167
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E +P YPGG +PLGLA D E K+KE+KNGRLAM +M G
Sbjct: 168 -----GGPLG-----EVTDPIYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFG 216
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 217 FFVQAIVTGKGPLENLADHLADP 239
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 124
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 125 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------ 178
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M G
Sbjct: 179 -----GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 228 FFVQAIVTGKGPLENLADHLADP 250
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+PP YL G GD+G+D GL DPE+ + E++H+R+AM G G +F +LL G+
Sbjct: 61 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV 120
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 121 KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA------ 174
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA D E K+KE+KNGRLAM +M G
Sbjct: 175 -----GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +H++DP
Sbjct: 224 FFVQAIVTGKGPLENLADHIADP 246
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 126 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------ 179
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M G
Sbjct: 180 -----GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 229 FFVQAIVTGKGPLENLADHLADP 251
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 64 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 123
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 124 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA------ 177
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M G
Sbjct: 178 -----GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 227 FFVQAIVTGKGPLENLADHLADP 249
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 64 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 123
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 124 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------ 177
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M G
Sbjct: 178 -----GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 227 FFVQAIVTGKGPLENLADHLADP 249
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 124 R-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 177
+ VW++ G+ F + +L Q +L +A M + EG
Sbjct: 126 KFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAV-------EGYRV 178
Query: 178 GLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTH 237
E E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M G FVQA VT
Sbjct: 179 AGEPLGEVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
Query: 238 VGPIDNILEHLSDP 251
GP++N+ +HL+DP
Sbjct: 238 KGPLENLADHLADP 251
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 126/265 (47%), Gaps = 50/265 (18%)
Query: 15 SSSSFICNDVNKSSIGITSAFLPAKSGTTRRYLATVVRAQQRPTWLPGVDP--------- 65
SSSSF V SS +S+ + T R TV +A+ + P P
Sbjct: 9 SSSSFAGKAVKLSS---SSSEITGNGKVTMR--KTVTKAKPASSSSPWYGPDRVKYLGPF 63
Query: 66 ----PPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVT 121
P YL G D+G+D GL DPE+ + E++H R+AM G G +F +L
Sbjct: 64 SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 123
Query: 122 GIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYIS 166
GI+ VW++AGA F S ++ Q++LMG E R
Sbjct: 124 GIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA---- 179
Query: 167 PGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAM 226
G G E ++P YPGG +PLGLA+D E K+KEIKNGRLAM +M
Sbjct: 180 -------GGPLG-----EVIDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNGRLAMFSM 226
Query: 227 LGIFVQASVTHVGPIDNILEHLSDP 251
G FVQA VT GP++N+ +HL+DP
Sbjct: 227 FGFFVQAIVTGKGPLENLADHLADP 251
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 106/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 126 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------ 179
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 180 -----GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 229 FFVQAIVTGKGPLENLADHLADP 251
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 106/203 (52%), Gaps = 32/203 (15%)
Query: 64 DPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGI 123
+ P YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 124 R-ELPVWYEAGAVEFKFA--------------STRTLFIVQLLLMGFAETKRYMDYISPG 168
+ VW++AG+ F S ++ Q++LMG E R
Sbjct: 126 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA------ 179
Query: 169 SQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLG 228
G G E ++P YPGG +PLGLA D E K+KEIKNGRLAM +M G
Sbjct: 180 -----GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 229 IFVQASVTHVGPIDNILEHLSDP 251
FVQA VT GP++N+ +HL+DP
Sbjct: 229 FFVQAIVTGKGPLENLADHLADP 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,446,864
Number of Sequences: 539616
Number of extensions: 4377043
Number of successful extensions: 9984
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 9670
Number of HSP's gapped (non-prelim): 139
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)