BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024591
(265 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2EIX|A Chain A, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
pdb|2EIX|B Chain B, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
Length = 243
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 148/238 (62%), Gaps = 12/238 (5%)
Query: 39 DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCR-----KEIVK-MIFV 92
+P +K+F L ++ ++HN F F L P V+GLPIGQH+S + KEI + V
Sbjct: 7 NPNEYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPV 66
Query: 93 GSHSDGIFFNIL---YHATCLLSLLISVN--SMQSVANIIGRFRYQPGQVRAFGMTAGGS 147
S + +F+++ Y + + +N V G+F Y+P V+ GM AGG+
Sbjct: 67 SSDDEKGYFDLIIKVYEKGQMSQYIDHLNPGDFLQVRGPKGQFDYKPNMVKEMGMIAGGT 126
Query: 148 GITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 207
GITPM QV RAI++NP +KT ++LI+ANV +DILL+ ELD A KY + F +YYVLN P
Sbjct: 127 GITPMLQVARAIIKNPKEKTIINLIFANVNEDDILLRTELDDMAKKYSN-FKVYYVLNNP 185
Query: 208 PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYTSEMLFQF 265
P W GGVGFVS +MI+ H P+SDI+V+ CGPP MNKAM HLE LGYT E F F
Sbjct: 186 PAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPMMNKAMQGHLETLGYTPEQWFIF 243
>pdb|1UMK|A Chain A, The Structure Of Human Erythrocyte Nadh-Cytochrome B5
Reductase
Length = 275
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 43/260 (16%)
Query: 46 FKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEIVKMIFV------GSHSDGI 99
+L+ R +SH+ +F F LP+P +LGLP+GQHI I + V S D
Sbjct: 19 LRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKG 78
Query: 100 FFNIL-----------YHATCLLSLLISVNSMQSVANII--------------GRFRYQP 134
F +++ + A +S + SMQ + + I G+F +P
Sbjct: 79 FVDLVIKVYFKDTHPKFPAGGKMSQYL--ESMQ-IGDTIEFRGPSGLLVYQGKGKFAIRP 135
Query: 135 GQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEE 186
+ V++ GM AGG+GITPM QV RAI+++P+D T HL++AN T +DILL+ E
Sbjct: 136 DKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPE 195
Query: 187 LDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK 246
L+ K+ +F ++Y L++ PE+W+ G GFV++EMI+ H P P + VL CGPPPM +
Sbjct: 196 LEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQ 255
Query: 247 -AMAAHLEALGYTSEMLFQF 265
A +L+ +G+ +E F F
Sbjct: 256 YACLPNLDHVGHPTERCFVF 275
>pdb|1CNF|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
pdb|2CND|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 35/254 (13%)
Query: 39 DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEIVKMIFVGSHSDG 98
+P +LV + +LS +V F F LP+P VLGLPIG+HI I + + +++
Sbjct: 8 NPRGRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPT 67
Query: 99 IFFNILYHATCLLSLL--------------------ISVNSMQSVANIIGRFRY------ 132
+ + H L+ + + V S V +G Y
Sbjct: 68 SMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSF 127
Query: 133 ----QPGQVRAFGMTAGGSGITPMFQVTRAILEN-PNDKTKVHLIYANVTYEDILLKEEL 187
+ R M GGSGITPM+Q+ +A+L + P D T++HL+YAN T +DILL++EL
Sbjct: 128 VINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDEL 187
Query: 188 DGFAAKYPDQFTIYYVLNQ---PPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM 244
D +AA+YPD+ ++YV++Q P E W VGFV++ +++ H P D L CGPPPM
Sbjct: 188 DRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPM 247
Query: 245 NK-AMAAHLEALGY 257
+ A++ +LE + Y
Sbjct: 248 IQFAISPNLEKMKY 261
>pdb|1NDH|A Chain A, Crystal Structure Of Nadh-Cytochrome B5 Reductase From Pig
Liver At 2.4 Angstroms Resolution
Length = 272
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 144/268 (53%), Gaps = 43/268 (16%)
Query: 38 KDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEIVKMIF------ 91
++P+ +L+ + ++H+ +F F LP+P +LGLP+GQHI I +
Sbjct: 8 ENPDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPYTP 67
Query: 92 VGSHSDGIFFNIL-----------YHATCLLSLLISVNSMQSVANII------------- 127
V S D F +++ + A +S + SM+ + + I
Sbjct: 68 VSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLE--SMK-IGDTIEFRGPNGLLVYQG 124
Query: 128 -GRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTY 178
G+F +P + V++ GM AGG+GITPM QV RAI+++P+D T HL++AN T
Sbjct: 125 KGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTE 184
Query: 179 EDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLR 238
+DILL+ EL+ ++ +F ++Y +++ PE+W+ GFV++EMI+ H P P + VL
Sbjct: 185 KDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLM 244
Query: 239 CGPPPMNK-AMAAHLEALGYTSEMLFQF 265
CGPPPM + A +LE +G+ E F F
Sbjct: 245 CGPPPMIQYACLPNLERVGHPKERCFAF 272
>pdb|1CNE|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 132/254 (51%), Gaps = 35/254 (13%)
Query: 39 DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEIVKMIFVGSHSDG 98
+P +LV + +LS +V F F LP+P VLGLPIG+HI I + + +++
Sbjct: 8 NPRGRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPT 67
Query: 99 IFFNILYHATCLLSLL--------------------ISVNSMQSVANIIGRFRY------ 132
+ + H L+ + + V S V +G Y
Sbjct: 68 SMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSF 127
Query: 133 ----QPGQVRAFGMTAGGSGITPMFQVTRAILEN-PNDKTKVHLIYANVTYEDILLKEEL 187
+ R M GGSGITPM+Q+ +A+L + P D T++HL+YAN T +DILL++EL
Sbjct: 128 VINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDEL 187
Query: 188 DGFAAKYPDQFTIYYVLNQ---PPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM 244
D +AA+YPD+ ++YV++Q P E W VGFV++ +++ H P D L GPPPM
Sbjct: 188 DRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALASGPPPM 247
Query: 245 NK-AMAAHLEALGY 257
+ A++ +LE + Y
Sbjct: 248 IQFAISPNLEKMKY 261
>pdb|1IB0|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad And Nad
pdb|1I7P|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad
Length = 274
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 37/265 (13%)
Query: 38 KDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEIVKMIF------ 91
++P+ +L+ + LSH+ +F F LP+P +LGLPIGQHI I +
Sbjct: 10 ENPDIKYPLRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTP 69
Query: 92 VGSHSDGIFFNIL---YHATCLLSLLISVNSMQSVANI-IG---RFRYQPG--------- 135
V S D F +++ Y Q + N+ IG FR G
Sbjct: 70 VSSDDDKGFVDLVVKVYFKETHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGK 129
Query: 136 --------------QVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDI 181
V++ GM AGG+GITPM QV RA+L++PND T +L++AN + +DI
Sbjct: 130 FAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDI 189
Query: 182 LLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGP 241
LL+ EL+ ++ +F ++Y +++ P++W+ GFV++EMI+ H P P + +L CGP
Sbjct: 190 LLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGP 249
Query: 242 PPMNK-AMAAHLEALGYTSEMLFQF 265
PPM + A +LE +G+ E F F
Sbjct: 250 PPMIQFACLPNLERVGHPKERCFTF 274
>pdb|1QX4|A Chain A, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
pdb|1QX4|B Chain B, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
Length = 274
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 37/265 (13%)
Query: 38 KDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEIVKMIF------ 91
++P+ +L+ + LSH+ +F F LP+P +LGLPIGQHI I +
Sbjct: 10 ENPDIKYPLRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTP 69
Query: 92 VGSHSDGIFFNIL---YHATCLLSLLISVNSMQSVANI-IG---RFRYQPG--------- 135
V S D F +++ Y Q + N+ IG FR G
Sbjct: 70 VSSDDDKGFVDLVVKVYFKETHPKFPAGGKMPQYLENMNIGDTIEFRGPNGLLVYQGKGK 129
Query: 136 --------------QVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDI 181
V++ GM AGG+GITPM QV RA+L++PND T +L++AN + +DI
Sbjct: 130 FAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDI 189
Query: 182 LLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGP 241
LL+ EL+ ++ +F ++Y +++ P++W+ GFV++EMI+ H P P + +L CGP
Sbjct: 190 LLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGP 249
Query: 242 PPMNK-AMAAHLEALGYTSEMLFQF 265
PPM + A +LE +G+ E F F
Sbjct: 250 PPMIQFACLPNLERVGHPKERCFTF 274
>pdb|2R6H|A Chain A, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
pdb|2R6H|B Chain B, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
pdb|2R6H|C Chain C, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
pdb|2R6H|D Chain D, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
Length = 290
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 144 AGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPD-QFTIYY 202
GG+G P+ + KV Y + +I +E+ ++P+ +F I
Sbjct: 163 GGGAGXAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIAL 222
Query: 203 VLNQPPESWNGGVGFVSKEMIQTHCP---APASDIQVLRCGPPPMNKAMAAHLEALGYTS 259
QP ++W G VGF+ + + + AP DI+ CGP P A+ LE LG
Sbjct: 223 SDPQPEDNWTGYVGFIHQVIYDNYLKDHDAP-EDIEYYXCGPGPXANAVKGXLENLGVPR 281
Query: 260 EMLF 263
LF
Sbjct: 282 NXLF 285
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M AGG+GITPM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLR-----CGPPPMNKAM 248
YPD F + Y +++ ++ GG ++ ++ + H I+ + CGPPPM + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYI-QDRVAEHADQLWQLIKNQKTHTYICGPPPMEEGI 271
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 142 MTAGGSGITP----MFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQ 197
M A G+GI P ++++ + E+ K K LI+ +IL K++ + AA+ PD
Sbjct: 255 MLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDN 314
Query: 198 FTIYYVLNQPPESWNGGVGFVSK----------EMIQTHCPAPASDIQVLRCG----PPP 243
F + Y +++ ++ +GG +V EMIQ + V CG PP
Sbjct: 315 FRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQ------KPNTHVYMCGLKGMQPP 368
Query: 244 MNKAMAAHLEALGYTSEML 262
+++ A E G E +
Sbjct: 369 IDETFTAEAEKRGLNWEEM 387
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M AGG+GITPM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLR-----CGPPPMNKAM 248
YPD F + Y +++ ++ GG ++ ++ + H I+ + CGP M + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYI-QDRVAEHADELWQLIKNQKTHTYICGPRGMEEGI 271
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M AGG+GITPM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLR-----CGPPPMNKAM 248
YPD F + Y +++ ++ GG ++ ++ + H I+ + CGP M + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYI-QDRVAEHADQLWQLIKNQKTHTYICGPRGMEEGI 271
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M AGG+GITPM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 242
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 142 MTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIY 201
M AGG+GI P + + +LE + V L++ D++ E+LD K P + Y
Sbjct: 215 MLAGGTGIAPFLSMLQ-VLEQKGSEHPVRLVFGVTQDCDLVALEQLDALQQKLP--WFEY 271
Query: 202 YVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALG 256
+ ES + G+V+ + + ++ V CGP PM +A+ + L+ G
Sbjct: 272 RTVVAHAESQHERKGYVTGHI--EYDWLNGGEVDVYLCGPVPMVEAVRSWLDTQG 324
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M AGG+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 144 MLAGGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 203
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 204 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 234
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLR-----CGPPPMNKAM 248
YPD F + Y +++ ++ GG ++ ++ + H I+ + CGP M + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYI-QDRVAEHADQLWQLIKNQKTHTYICGPRGMEEGI 270
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 242
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 242
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 242
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 242
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 211
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 212 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 242
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 213 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 243
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 203
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 204 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 234
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 203
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 204 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 234
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 203
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 204 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 234
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 203
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 204 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 234
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 142 MTAGGSGITPMFQVTRAILE------NPNDKTK--VHLIYANVTYEDILLKEELDGFAAK 193
M A G+GI PM + + NP + K L++ T +IL KEEL+ K
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 203
Query: 194 YPDQFTIYYVLNQPPESWNGGVGFVSKEMIQ 224
YPD F + Y +++ ++ GG ++ + +
Sbjct: 204 YPDNFRLTYAISREQKNPQGGRMYIQDRVAE 234
>pdb|1QFJ|A Chain A, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|B Chain B, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|C Chain C, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|D Chain D, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
Length = 232
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 142 MTAGGSGITPMFQVTRAIL-----ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPD 196
+ AGG+G F R+IL NPN ++ + + + EL+ + K+P
Sbjct: 107 LIAGGTG----FSYARSILLTALARNPNRDITIY--WGGREEQHLYDLCELEALSLKHP- 159
Query: 197 QFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQV 236
+ V+ QP W G G V ++Q H DI +
Sbjct: 160 GLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYI 199
>pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
pdb|1CQX|B Chain B, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
Length = 403
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 94/250 (37%), Gaps = 28/250 (11%)
Query: 30 YLFSSKKPKDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEI--- 86
Y S+++P + ++ F + ++ S + F E V+ GQ+ S ++
Sbjct: 141 YERSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPAL 200
Query: 87 ----VKMIFVGSHSDGIFFNILY-----------HATCLLSLLISVNSMQSVANIIGRFR 131
++ + +G + I + + LL ++V +A G F
Sbjct: 201 GLQQIRQYSLSDMPNGRTYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFH 260
Query: 132 YQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFA 191
+ +GG G+TPM + + L+ P +V ++ +++ L A
Sbjct: 261 IDVDAKTPIVLISGGVGLTPMVSMLKVALQAP--PRQVVFVHGARNSAVHAMRDRLREAA 318
Query: 192 AKYPDQFTIYYVLNQP-PESWNGG----VGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK 246
Y + ++ +QP PE G G V + I+ P +D + CGP P +
Sbjct: 319 KTY-ENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLPDADYYI--CGPIPFMR 375
Query: 247 AMAAHLEALG 256
L+ LG
Sbjct: 376 MQHDALKNLG 385
>pdb|1TVC|A Chain A, Fad And Nadh Binding Domain Of Methane Monooxygenase
Reductase From Methylococcus Capsulatus (Bath)
Length = 250
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%)
Query: 117 VNSMQSVANIIGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILE--NPNDKTKVHLIYA 174
V + SV +G F + + AGG+G+ P+ + R + E PN+ IY
Sbjct: 97 VGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTAPNETR----IYF 152
Query: 175 NVTYE-DILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASD 233
V E ++ +EL + T+ + P W G G + ++ + ++
Sbjct: 153 GVNTEPELFYIDELKSLERSMRN-LTVKACVWHPSGDWEGEQG-SPIDALREDLESSDAN 210
Query: 234 IQVLRCGPPPMNKAMAAHLEALGYTSEMLF 263
+ CGPP M A + + G E +F
Sbjct: 211 PDIYLCGPPGMIDAACELVRSRGIPGEQVF 240
>pdb|3OZU|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Miconazole
pdb|3OZV|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZV|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZW|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
pdb|3OZW|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
Length = 403
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 94/250 (37%), Gaps = 28/250 (11%)
Query: 30 YLFSSKKPKDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRKEI--- 86
Y S+++P + ++ F + ++ S + F E V+ GQ+ S ++
Sbjct: 141 YERSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPAL 200
Query: 87 ----VKMIFVGSHSDGIFFNILY-----------HATCLLSLLISVNSMQSVANIIGRFR 131
++ + +G + I + + LL ++V +A G F
Sbjct: 201 GLQQIRQYSLSDMPNGRSYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFH 260
Query: 132 YQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFA 191
+ +GG G+TPM + + L+ P +V ++ +++ L A
Sbjct: 261 IDVDAKTPIVLISGGVGLTPMVSMLKVALQAP--PRQVVFVHGARNSAVHAMRDRLREAA 318
Query: 192 AKYPDQFTIYYVLNQP-PESWNGG----VGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK 246
Y + ++ +QP PE G G V + I+ P +D + CGP P +
Sbjct: 319 KTY-ENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLPDADYYI--CGPIPFMR 375
Query: 247 AMAAHLEALG 256
L+ LG
Sbjct: 376 MQHDALKNLG 385
>pdb|3JQP|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|B Chain B, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|C Chain C, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|D Chain D, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|E Chain E, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|F Chain F, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQR|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum
Length = 316
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 140 FGMTAGGSGITP-------MFQVTRAILENPNDKTKVHL-IYANVTYED-ILLKEELDGF 190
F A G+GI+P +F + L N N ++ IY V ED IL EL+ F
Sbjct: 173 FIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYF 232
Query: 191 AAKYPDQFTIYYVLNQPPES 210
YP+ I+YV + S
Sbjct: 233 QKMYPNNINIHYVFSYKQNS 252
>pdb|2OK7|A Chain A, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|B Chain B, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|C Chain C, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|D Chain D, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|E Chain E, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|F Chain F, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK8|A Chain A, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|B Chain B, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|C Chain C, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|D Chain D, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
Length = 316
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 140 FGMTAGGSGITP-------MFQVTRAILENPNDKTKVHL-IYANVTYED-ILLKEELDGF 190
F A G+GI+P +F + L N N ++ IY V ED IL EL+ F
Sbjct: 173 FIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYF 232
Query: 191 AAKYPDQFTIYYVLNQPPES 210
YP+ I+YV + S
Sbjct: 233 QKMYPNNINIHYVFSYKQNS 252
>pdb|3JQQ|A Chain A, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|B Chain B, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|C Chain C, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|D Chain D, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|E Chain E, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|F Chain F, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
Length = 316
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 140 FGMTAGGSGITP-------MFQVTRAILENPNDKTKVHL-IYANVTYED-ILLKEELDGF 190
F A G+GI+P +F + L N N ++ IY V ED IL EL+ F
Sbjct: 173 FIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYF 232
Query: 191 AAKYPDQFTIYYVLNQPPES 210
YP+ I+YV + S
Sbjct: 233 QKMYPNNINIHYVFSYKQNS 252
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 142 MTAGGSGITPMFQ-VTRAILEN-PNDK-TKVHLIYANVTYEDILL-KEELDGFAAKYPDQ 197
M A G+G+ P + R +E+ PN + + ++ V D LL EE + +YPD
Sbjct: 165 MIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDN 224
Query: 198 FTIYYVLNQPPESWNGGVGFVSKEM 222
F L++ ++ +GG +V ++
Sbjct: 225 FRYDKALSREQKNRSGGKMYVQDKI 249
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 142 MTAGGSGITPMFQ-VTRAILEN-PNDK-TKVHLIYANVTYEDILL-KEELDGFAAKYPDQ 197
M A G+G+ P + R +E+ PN + + ++ V D LL EE + +YPD
Sbjct: 170 MIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDN 229
Query: 198 FTIYYVLNQPPESWNGGVGFVSKEM 222
F L++ ++ +GG +V ++
Sbjct: 230 FRYDKALSREQKNRSGGKMYVQDKI 254
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 142 MTAGGSGITPMFQ-VTRAILEN-PNDK-TKVHLIYANVTYEDILL-KEELDGFAAKYPDQ 197
M A G+G+ P + R +E+ PN + + ++ V D LL EE + +YPD
Sbjct: 165 MIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDN 224
Query: 198 FTIYYVLNQPPESWNGGVGFVSKEM 222
F L++ ++ +GG +V ++
Sbjct: 225 FRYDKALSREQKNRSGGKMYVQDKI 249
>pdb|2INP|A Chain A, Structure Of The Phenol Hydroxylase-Regulatory Protein
Complex
pdb|2INP|B Chain B, Structure Of The Phenol Hydroxylase-Regulatory Protein
Complex
Length = 494
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 184 KEELDGFAAKYPDQFTIYY 202
KEE+D + KYPD F YY
Sbjct: 350 KEEMDWMSEKYPDTFDKYY 368
>pdb|3U52|A Chain A, X-Ray Crystal Structure Of Xenon-Pressurized Phenol
Hydroxylase From Pseudomonas Sp. Ox1
pdb|3U52|B Chain B, X-Ray Crystal Structure Of Xenon-Pressurized Phenol
Hydroxylase From Pseudomonas Sp. Ox1
Length = 511
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 184 KEELDGFAAKYPDQFTIYY 202
KEE+D + KYPD F YY
Sbjct: 355 KEEMDWMSEKYPDTFDKYY 373
>pdb|2ON5|A Chain A, Structure Of Nagst-2
pdb|2ON5|B Chain B, Structure Of Nagst-2
pdb|2ON5|C Chain C, Structure Of Nagst-2
pdb|2ON5|D Chain D, Structure Of Nagst-2
pdb|2ON5|E Chain E, Structure Of Nagst-2
pdb|2ON5|F Chain F, Structure Of Nagst-2
pdb|2ON5|G Chain G, Structure Of Nagst-2
pdb|2ON5|H Chain H, Structure Of Nagst-2
Length = 206
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 170 HLIYANVTYEDILLKEELDGFAAKYP 195
+L+ +VTY D+ L E G AAK+P
Sbjct: 147 YLVGDSVTYADLCLAEHTSGIAAKFP 172
>pdb|2WYA|A Chain A, Crystal Structure Of Human Mitochondrial 3-Hydroxy-3-
Methylglutaryl-Coenzyme A Synthase 2 (Hmgcs2)
pdb|2WYA|B Chain B, Crystal Structure Of Human Mitochondrial 3-Hydroxy-3-
Methylglutaryl-Coenzyme A Synthase 2 (Hmgcs2)
pdb|2WYA|C Chain C, Crystal Structure Of Human Mitochondrial 3-Hydroxy-3-
Methylglutaryl-Coenzyme A Synthase 2 (Hmgcs2)
pdb|2WYA|D Chain D, Crystal Structure Of Human Mitochondrial 3-Hydroxy-3-
Methylglutaryl-Coenzyme A Synthase 2 (Hmgcs2)
Length = 460
Score = 27.3 bits (59), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 84 KEIVKMIFVGSHSDGIFFNILYHATCLLSLLISVNSMQSVANIIGRFRYQPGQVRAF 140
K+ +++ +H+ ++ + LY CL SLL ++ + + IG F Y G +F
Sbjct: 318 KKTKASLYLSTHNGNMYTSSLYG--CLASLLSHHSAQELAGSRIGAFSYGSGLAASF 372
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,385,191
Number of Sequences: 62578
Number of extensions: 289381
Number of successful extensions: 885
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 824
Number of HSP's gapped (non-prelim): 61
length of query: 265
length of database: 14,973,337
effective HSP length: 97
effective length of query: 168
effective length of database: 8,903,271
effective search space: 1495749528
effective search space used: 1495749528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)