Your job contains 1 sequence.
>024592
MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA
SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY
VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS
NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLME
ALESLNENSLVYSIDEFHYKSAVNA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024592
(265 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061072 - symbol:RPA2 "replicon protein A2" sp... 458 2.2e-43 1
UNIPROTKB|Q6H7J5 - symbol:OJ1643_A10.19 "Putative replica... 351 4.7e-32 1
UNIPROTKB|Q9AVM2 - symbol:OsRPA32 "Replication protein A ... 350 6.0e-32 1
POMBASE|SPCC1753.01c - symbol:ssb2 "single-stranded DNA b... 251 1.9e-21 1
RGD|619714 - symbol:Rpa2 "replication protein A2" species... 239 3.5e-20 1
MGI|MGI:1339939 - symbol:Rpa2 "replication protein A2" sp... 237 5.7e-20 1
UNIPROTKB|G4MT45 - symbol:MGG_07124 "Replication protein ... 226 8.3e-19 1
UNIPROTKB|P15927 - symbol:RPA2 "Replication protein A 32 ... 221 2.8e-18 1
UNIPROTKB|Q5RC43 - symbol:RPA2 "Replication protein A 32 ... 221 2.8e-18 1
ASPGD|ASPL0000062650 - symbol:AN0582 species:162425 "Emer... 219 4.6e-18 1
UNIPROTKB|F1STM9 - symbol:RPA2 "Uncharacterized protein" ... 214 1.6e-17 1
UNIPROTKB|Q5ZLH1 - symbol:RPA2 "Uncharacterized protein" ... 211 3.2e-17 1
UNIPROTKB|E2RQP7 - symbol:RPA2 "Uncharacterized protein" ... 209 5.3e-17 1
UNIPROTKB|Q5Z8L1 - symbol:P0550B04.15 "Putative replicati... 215 5.3e-17 1
UNIPROTKB|Q2KI86 - symbol:RPA2 "Uncharacterized protein" ... 207 8.6e-17 1
SGD|S000005256 - symbol:RFA2 "Subunit of heterotrimeric R... 195 1.6e-15 1
CGD|CAL0006323 - symbol:RFA2 species:5476 "Candida albica... 181 4.9e-14 1
UNIPROTKB|Q59Z33 - symbol:RFA2 "Putative uncharacterized ... 181 4.9e-14 1
UNIPROTKB|Q5TEJ7 - symbol:RPA2 "Replication protein A 32 ... 178 1.0e-13 1
ZFIN|ZDB-GENE-010131-3 - symbol:rpa2 "replication protein... 176 4.9e-13 1
UNIPROTKB|Q13156 - symbol:RPA4 "Replication protein A 30 ... 162 1.4e-10 1
FB|FBgn0032906 - symbol:RPA2 "Replication protein A2" spe... 134 5.4e-07 1
>TAIR|locus:2061072 [details] [associations]
symbol:RPA2 "replicon protein A2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006260 "DNA replication" evidence=IGI;ISS;RCA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0016458 "gene silencing" evidence=RCA;IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009555 "pollen
development" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016458
EMBL:AC006403 EMBL:DQ284987 EMBL:AK117537 EMBL:BT005433
EMBL:AY088525 IPI:IPI00548871 PIR:C84637 RefSeq:NP_001118376.1
RefSeq:NP_565571.1 UniGene:At.13816 HSSP:P15927
ProteinModelPortal:Q9ZQ19 SMR:Q9ZQ19 IntAct:Q9ZQ19 STRING:Q9ZQ19
PaxDb:Q9ZQ19 PRIDE:Q9ZQ19 EnsemblPlants:AT2G24490.1
EnsemblPlants:AT2G24490.2 GeneID:816985 KEGG:ath:AT2G24490
TAIR:At2g24490 eggNOG:COG5235 HOGENOM:HOG000265427
InParanoid:Q9ZQ19 KO:K10739 OMA:GGNSFMP PhylomeDB:Q9ZQ19
ProtClustDB:CLSN2719507 Genevestigator:Q9ZQ19 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 Uniprot:Q9ZQ19
Length = 279
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 100/272 (36%), Positives = 153/272 (56%)
Query: 3 SGEFDXXXXXXXXXXMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQXXX--XXXXXXXXX 60
S +F+ M SQ + + SSS +KNR+ + L+P+TVKQ
Sbjct: 4 SSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGL 63
Query: 61 XIDGADVNTITVVGIVCDMQD-KEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM 119
I+G + +++VG+VCD + K + F +DDGTGRI+C RW E + E+ + G
Sbjct: 64 VINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGT 123
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT---RLRGGSSNQPQ 176
YVR+ GHLK FQ K L +S+RPI+DFNE+T H++ECI+ N+ R + G Q
Sbjct: 124 YVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQSV 183
Query: 177 MT------NSNHLKEYNAISSNHYSFDEG-KSIDQMVLDFLRRPEFLANNNGVHRNVISQ 229
T N+N N + S+ + G K++D M+LD+L++P A G+H + I+Q
Sbjct: 184 NTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHIDEIAQ 243
Query: 230 QLNLPMDKLMEALESLNENSLVYS-IDEFHYK 260
QL +P +KL ++SL + L+YS IDE+H+K
Sbjct: 244 QLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275
>UNIPROTKB|Q6H7J5 [details] [associations]
symbol:OJ1643_A10.19 "Putative replication protein A2"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR004365 Pfam:PF01336
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP008208
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 OMA:QGFIYPT EMBL:AP004192
EMBL:AK073723 RefSeq:NP_001047510.1 UniGene:Os.15035 IntAct:Q6H7J5
STRING:Q6H7J5 EnsemblPlants:LOC_Os02g42230.1 GeneID:4330068
KEGG:osa:4330068 Uniprot:Q6H7J5
Length = 298
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 87/267 (32%), Positives = 145/267 (54%)
Query: 18 MPSQATTVPDPSSS----FSKNRNVRTLLPMTVKQXXXXXXXXXXXX--XIDGADVNTIT 71
MPSQAT + +S F K+RN + LLP+TVKQ ++G +V+T+
Sbjct: 31 MPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFAVNGMEVSTVR 90
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQ 131
+VG + + D+ F +DDGTGR+ +RW ++ + E+ I G YV V G LK FQ
Sbjct: 91 LVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDYVIVNGGLKGFQ 150
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG--------GSSNQ--PQMT--- 178
KR + AYS+R I +FN++T HF+ C++V L TR + G+ NQ P+ +
Sbjct: 151 GKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGTPNQTMPRDSMAY 210
Query: 179 NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKL 238
N + L + S + G ++ +VL+ P + +++GV + +S++LNLP + +
Sbjct: 211 NQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGVDYVSRRLNLPEETV 270
Query: 239 MEAL-ESLNENSLVYSIDEFHYKSAVN 264
+ + + ++ L +ID+ HYKS +N
Sbjct: 271 GKIIIDQVDLGHLYATIDDHHYKSTMN 297
>UNIPROTKB|Q9AVM2 [details] [associations]
symbol:OsRPA32 "Replication protein A 30kDa" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HSSP:P15927
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 EMBL:AB037145 ProteinModelPortal:Q9AVM2
IntAct:Q9AVM2 STRING:Q9AVM2 Gramene:Q9AVM2 Uniprot:Q9AVM2
Length = 279
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 86/267 (32%), Positives = 140/267 (52%)
Query: 19 PSQATTVPDP---SSSFSKNRNVRTLLPMTVKQXXXXXXXXXXXXX-----IDGADVNTI 70
PSQ T+ + S++ SK+R + +P+TVKQ +DG + +
Sbjct: 12 PSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVETANV 71
Query: 71 TVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAF 130
+VG+V ++ F+IDDGTGR++ RW ++ + E + GMYV V G LK
Sbjct: 72 RLVGLVSGKTERNTDVSFMIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSLKGL 131
Query: 131 QDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQM----TNSNHLKEY 186
Q+++ A+++RP+ D+NE+T HF++C+ + L NT+ + GS + ++SN E
Sbjct: 132 QERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGFSEM 191
Query: 187 N---AISSNH---YSFDEGKSID--QMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKL 238
++ SN S G D VL+ R P + + +GVH + I ++L LP K+
Sbjct: 192 TTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRLRLPEAKI 251
Query: 239 MEALESLNENSLVYS-IDEFHYKSAVN 264
A++ L + +YS IDE HYKSA N
Sbjct: 252 KVAIDYLADIGHIYSTIDESHYKSAFN 278
>POMBASE|SPCC1753.01c [details] [associations]
symbol:ssb2 "single-stranded DNA binding protein Ssb2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005662 "DNA replication factor A complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006269 "DNA
replication, synthesis of RNA primer" evidence=ISO] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006310 "DNA recombination"
evidence=ISO] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0003697 "single-stranded DNA binding" evidence=IDA]
InterPro:IPR004365 Pfam:PF01336 PomBase:SPCC1753.01c GO:GO:0005829
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0065007
GO:GO:0006269 GO:GO:0005662 eggNOG:COG5235 KO:K10739 OMA:GGNSFMP
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 HOGENOM:HOG000216562 EMBL:U59386 PIR:T41124
RefSeq:NP_588227.2 ProteinModelPortal:Q92373 DIP:DIP-29238N
STRING:Q92373 EnsemblFungi:SPCC1753.01c.1 GeneID:2538781
KEGG:spo:SPCC1753.01c OrthoDB:EOG4F21C7 NextBio:20799963
Uniprot:Q92373
Length = 279
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 76/254 (29%), Positives = 121/254 (47%)
Query: 27 DPSSSFSKNRNV---RTLLPMTVKQXXXXXXXXXXXXX-IDGADVNTITVVGIVCDMQDK 82
D SS S +R L P+T+KQ IDG +V +T VG++ ++ +
Sbjct: 33 DQSSQPSVDRQQGAGNKLRPVTIKQILNASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQ 92
Query: 83 EPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
+ I+DGTG IE W H + +++++ YVRVYG++K F K + + +R
Sbjct: 93 TTNTTYQIEDGTGMIEVRHWEH----IDALSELATDTYVRVYGNIKIFSGKIYIASQYIR 148
Query: 143 PIIDFNEITSHFVECIYVQLYNTRLRGG--SSNQPQMTNSNHLKEYNAISSNHYSFDEGK 200
I D NE+ HF+E I V L+ T+ +N P SN L YN ISSN
Sbjct: 149 TIKDHNEVHFHFLEAIAVHLHFTQKANAVNGANAPGYGTSNALG-YNNISSN----GAAN 203
Query: 201 SIDQMVLDFLRRPEFLA----------NNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
S++Q + ++ P + N GVH ++Q + +D L + L + +
Sbjct: 204 SLEQKLAEYSLTPAQMTVMQAIHSAPETNEGVHVRQLAQSVGPGID-LTAVTDFLQQEGI 262
Query: 251 VYS-IDEFHYKSAV 263
+Y+ IDE H+KS +
Sbjct: 263 IYTTIDENHFKSVL 276
>RGD|619714 [details] [associations]
symbol:Rpa2 "replication protein A2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005662 "DNA replication factor A complex"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IC]
[GO:0006284 "base-excision repair" evidence=NAS] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISO;ISS] [GO:0016605 "PML body" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IMP] [GO:0005730 "nucleolus"
evidence=ISO] RGD:619714 GO:GO:0006284 GO:GO:0016605 GO:GO:0006260
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310 GO:GO:0003697
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0047485
GO:GO:0010569 GO:GO:0005662 eggNOG:COG5235 KO:K10739 OMA:GGNSFMP
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 CTD:6118 HOGENOM:HOG000216562 HOVERGEN:HBG000086
OrthoDB:EOG4WQ13T EMBL:BC079180 EMBL:X98490 IPI:IPI00210011
RefSeq:NP_067593.1 UniGene:Rn.40389 ProteinModelPortal:Q63528
SMR:Q63528 STRING:Q63528 PRIDE:Q63528 Ensembl:ENSRNOT00000017549
GeneID:59102 KEGG:rno:59102 UCSC:RGD:619714
GeneTree:ENSGT00390000010045 InParanoid:Q63528 NextBio:611723
Genevestigator:Q63528 GermOnline:ENSRNOG00000013005 Uniprot:Q63528
Length = 270
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 66/244 (27%), Positives = 124/244 (50%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 30 PTPSQAEKKSRARAQHIVPCTISQLLSATLTDEVFK-IGDVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSS-NQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
+ D NE T+H +E + L ++ +S +P M+N + E S N++ G ++
Sbjct: 149 LEDMNEFTAHILEVVNSHLMLSKANSQASVGRPSMSNPG-MGEPGNFSGNNFMPANGLTV 207
Query: 203 DQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEF 257
Q VL+ ++ RPE L N +++ SQ ++P+ + +A++ L NE + ++D+
Sbjct: 208 VQNQVLNLIKACPRPEGL-N----FQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDD 262
Query: 258 HYKS 261
H+KS
Sbjct: 263 HFKS 266
>MGI|MGI:1339939 [details] [associations]
symbol:Rpa2 "replication protein A2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005662 "DNA replication factor A complex" evidence=ISO]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISO] [GO:0019903 "protein
phosphatase binding" evidence=ISO] [GO:0047485 "protein N-terminus
binding" evidence=ISO] MGI:MGI:1339939 GO:GO:0005654 GO:GO:0003677
GO:GO:0016605 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
InterPro:IPR011991 Reactome:REACT_120463 GO:GO:0006310
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Reactome:REACT_27235 GO:GO:0010569 eggNOG:COG5235
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 HOGENOM:HOG000216562 HOVERGEN:HBG000086
OrthoDB:EOG4WQ13T ChiTaRS:RPA2 EMBL:D00812 IPI:IPI00311131
PIR:S28682 UniGene:Mm.2870 ProteinModelPortal:Q62193 SMR:Q62193
DIP:DIP-48715N STRING:Q62193 PhosphoSite:Q62193 PaxDb:Q62193
PRIDE:Q62193 InParanoid:Q62193 CleanEx:MM_RPA2
Genevestigator:Q62193 GermOnline:ENSMUSG00000028884 Uniprot:Q62193
Length = 270
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 62/243 (25%), Positives = 121/243 (49%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 30 PTPSQAEKKSRVRAQHIVPCTISQLLSATLTDEVFR-IGDVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAPPMDVRQWVDTDDASGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIIP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRG-GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
+ D NE T+H +E + + ++ S+ +P M+N + +N +N + +
Sbjct: 149 LEDMNEFTAHILEVVNSHMMLSKPNSQASAGRPSMSNPGMSESFNFSGNNFMPANRLTVV 208
Query: 203 DQMVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEFH 258
VL+ ++ RPE L N +++ SQ ++P+ + +A++ L NE + ++D+ H
Sbjct: 209 QNQVLNLIKACPRPEGL-N----FQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>UNIPROTKB|G4MT45 [details] [associations]
symbol:MGG_07124 "Replication protein A 32 kDa subunit"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004365 Pfam:PF01336 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CM001232 KO:K10739
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 RefSeq:XP_003715317.1 EnsemblFungi:MGG_07124T0
GeneID:2683246 KEGG:mgr:MGG_07124 Uniprot:G4MT45
Length = 275
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 67/223 (30%), Positives = 105/223 (47%)
Query: 41 LLPMTVKQXXXXXXXX-XXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
L P+TVKQ +DG + IT+VG V + + + IDDGTG I+
Sbjct: 47 LKPVTVKQLLDVQAPYPDADFLLDGRAITQITLVGQVRSINPQPTNITYRIDDGTGTIDV 106
Query: 100 SRWAH-EQME-FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
RW E+ E + +Q YVRV+G LKAF ++R + A +RP+ DFNE+ H +E
Sbjct: 107 KRWIDPEKAEDADAASQHQPDSYVRVWGKLKAFNNRRHVGALFVRPVEDFNEVNYHMLEV 166
Query: 158 IYVQLYNTRLR-GGSSNQPQMTNSN-HLKEYNAISSNHYSFDEGKSID-QMVLDFLRRPE 214
YV L R GG + N + Y S S + Q + + L+
Sbjct: 167 AYVHLDAVRQSSGGGGGAGGGGDDNMFVDSYGGGGGGGGSKAANCSTNAQRLFNHLQNSS 226
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDE 256
A N G+ N+I++ +N+ + + A + L L+Y ++D+
Sbjct: 227 --AGNEGLEANIIARGINMSVRDVEAAADELLSAGLIYPTVDD 267
>UNIPROTKB|P15927 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9606 "Homo sapiens" [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019903 "protein phosphatase
binding" evidence=IPI] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006261 "DNA-dependent DNA replication" evidence=TAS]
[GO:0005662 "DNA replication factor A complex" evidence=IPI]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000216 "M/G1
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=TAS] [GO:0000722 "telomere
maintenance via recombination" evidence=TAS] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=TAS] [GO:0000730 "DNA
recombinase assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006260 "DNA replication" evidence=TAS]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=TAS]
[GO:0006302 "double-strand break repair" evidence=TAS] [GO:0032201
"telomere maintenance via semi-conservative replication"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_216 InterPro:IPR004365
Pfam:PF01336 Reactome:REACT_115566 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000082 GO:GO:0016605 Gene3D:1.10.10.10
InterPro:IPR011991 Reactome:REACT_111183 GO:GO:0003697
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000216
GO:GO:0000084 GO:GO:0000075 GO:GO:0000722 Reactome:REACT_383
GO:GO:0000718 GO:GO:0006283 GO:GO:0006271 GO:GO:0010569
GO:GO:0032201 GO:GO:0006297 GO:GO:0005662 PDB:1Z1D PDBsum:1Z1D
EMBL:AL109927 GO:GO:0000730 PDB:1L1O PDBsum:1L1O eggNOG:COG5235
KO:K10739 OMA:GGNSFMP InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 EMBL:J05249 EMBL:CR450348
EMBL:DQ001128 EMBL:BC001630 EMBL:BC012157 EMBL:BC021257
IPI:IPI00013939 IPI:IPI00646500 IPI:IPI00647667 PIR:A43711
RefSeq:NP_002937.1 UniGene:Hs.79411 PDB:1DPU PDB:1QUQ PDB:2PI2
PDB:2PQA PDB:2Z6K PDB:3KDF PDBsum:1DPU PDBsum:1QUQ PDBsum:2PI2
PDBsum:2PQA PDBsum:2Z6K PDBsum:3KDF ProteinModelPortal:P15927
SMR:P15927 DIP:DIP-24187N IntAct:P15927 MINT:MINT-5002459
STRING:P15927 PhosphoSite:P15927 DMDM:132474 PaxDb:P15927
PRIDE:P15927 DNASU:6118 Ensembl:ENST00000313433
Ensembl:ENST00000373909 Ensembl:ENST00000373912 GeneID:6118
KEGG:hsa:6118 UCSC:uc001bpe.1 CTD:6118 GeneCards:GC01M028218
HGNC:HGNC:10290 HPA:CAB016538 HPA:HPA026306 HPA:HPA026309
MIM:179836 neXtProt:NX_P15927 PharmGKB:PA34652 HOGENOM:HOG000216562
HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T PhylomeDB:P15927 ChiTaRS:RPA2
EvolutionaryTrace:P15927 GenomeRNAi:6118 NextBio:23759
ArrayExpress:P15927 Bgee:P15927 CleanEx:HS_RPA2
Genevestigator:P15927 GermOnline:ENSG00000117748 Uniprot:P15927
Length = 270
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 61/245 (24%), Positives = 120/245 (48%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGG-SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
+ D NE T+H +E I + ++ S+ + ++N + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPG-MSEAGNFGGNSFMPANGLTV 207
Query: 203 DQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-IDE 256
Q VL+ ++ RPE G++ + QL ++ + + +A++ L+ +YS +D+
Sbjct: 208 AQNQVLNLIKACPRPE------GLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDD 261
Query: 257 FHYKS 261
H+KS
Sbjct: 262 DHFKS 266
>UNIPROTKB|Q5RC43 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9601 "Pongo abelii" [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR004365 Pfam:PF01336 GO:GO:0016605
GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0006310 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0010569 KO:K10739 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 CTD:6118
HOVERGEN:HBG000086 EMBL:CR858438 RefSeq:NP_001125362.2
UniGene:Pab.14522 ProteinModelPortal:Q5RC43 SMR:Q5RC43
GeneID:100172265 KEGG:pon:100172265 InParanoid:Q5RC43
Uniprot:Q5RC43
Length = 270
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 61/245 (24%), Positives = 120/245 (48%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGG-SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
+ D NE T+H +E I + ++ S+ + ++N + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPG-MSEAGNFGGNSFMPANGLTV 207
Query: 203 DQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-IDE 256
Q VL+ ++ RPE G++ + QL ++ + + +A++ L+ +YS +D+
Sbjct: 208 AQNQVLNLIKACPRPE------GLNFQDLKNQLKHMSVSSVKQAMDFLSNEGHIYSTVDD 261
Query: 257 FHYKS 261
H+KS
Sbjct: 262 DHFKS 266
>ASPGD|ASPL0000062650 [details] [associations]
symbol:AN0582 species:162425 "Emericella nidulans"
[GO:0045184 "establishment of protein localization" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0030491 "heteroduplex
formation" evidence=IEA] [GO:0007004 "telomere maintenance via
telomerase" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] EMBL:BN001308 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACD01000007 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 eggNOG:COG5235 KO:K10739 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949
HOGENOM:HOG000216562 OrthoDB:EOG4F21C7 RefSeq:XP_658186.1
ProteinModelPortal:Q5BFU8 STRING:Q5BFU8
EnsemblFungi:CADANIAT00002095 GeneID:2876360 KEGG:ani:AN0582.2
OMA:RMENRIT Uniprot:Q5BFU8
Length = 278
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 72/258 (27%), Positives = 120/258 (46%)
Query: 18 MPSQATTVPDPSSSFSKNRNVRTLLPMTVKQXXXXXXXX-XXXXXIDGADVNTITVVGIV 76
MP + T+ PS + N TL P+T+KQ IDG DV++I +G V
Sbjct: 20 MPGETTS---PSGGRQEWNNT-TLRPVTIKQILDATQPYPEANFTIDGQDVSSIVFIGQV 75
Query: 77 CDMQDKEPQFIFLIDDGTGRIECSRWAH--EQMEFNE--------VNQISKGMYVRVYGH 126
++ + + +DDGTG +E +W + E M+ E +N + Y +V+G
Sbjct: 76 RNISTQATNVTYKLDDGTGEVEAKQWINPSEAMDTTEDFGKEGKDLNGVEINGYAKVFGK 135
Query: 127 LKA-FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR-LRGGSSNQPQMTNSNHLK 184
LK+ F D++ +N + +RP+ D NE+ HF+E V L++TR G ++ +
Sbjct: 136 LKSLFGDRKVVNTHCVRPLTDINELHVHFLEAAAVHLFHTRGAPGPAAGATGKIDGGDAA 195
Query: 185 EYN---AISSNHYSFDEGKSID-QMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLM 239
A F S + V + LR P+ NN G+H I+ +L LP ++
Sbjct: 196 MGGLDGAGVGGGGGFPANMSATARRVYNLLRTEPQ---NNEGLHAQFIAAKLGLPPQDVV 252
Query: 240 EALESLNENSLVYS-IDE 256
A + L +V+S +D+
Sbjct: 253 RAGDELINAGMVFSTVDD 270
>UNIPROTKB|F1STM9 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019903 "protein phosphatase binding" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0010569 KO:K10739
OMA:GGNSFMP InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 CTD:6118 GeneTree:ENSGT00390000010045
EMBL:CU928393 RefSeq:NP_001231871.1 UniGene:Ssc.6559
Ensembl:ENSSSCT00000003978 GeneID:100514295 KEGG:ssc:100514295
Uniprot:F1STM9
Length = 270
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 62/248 (25%), Positives = 121/248 (48%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 30 PTPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFK-IGNVEISQVTIVGIIRHAEKAAT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLY----NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG 199
+ D NE T+H +E + + N++L G + ++N + E + N + G
Sbjct: 149 LEDMNEFTTHILEVVNAHMLLNKSNSQLLAG---RVPVSNPG-MGEVGSFGGNSFMPANG 204
Query: 200 KSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS- 253
++ Q VL+ ++ RPE G++ + QL ++ + + +A++ L+ +YS
Sbjct: 205 LTVAQNQVLNLIKACPRPE------GLNFQDLKNQLQHMSVASIKQAVDFLSNEGHIYST 258
Query: 254 IDEFHYKS 261
+D+ H+KS
Sbjct: 259 VDDDHFKS 266
>UNIPROTKB|Q5ZLH1 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004365
Pfam:PF01336 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:COG5235 KO:K10739 OMA:GGNSFMP InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 CTD:6118
HOGENOM:HOG000216562 HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T
GeneTree:ENSGT00390000010045 EMBL:AADN02051310 EMBL:AJ719763
IPI:IPI00589874 RefSeq:NP_001026063.1 UniGene:Gga.1820 SMR:Q5ZLH1
STRING:Q5ZLH1 Ensembl:ENSGALT00000001050 GeneID:419566
KEGG:gga:419566 InParanoid:Q5ZLH1 NextBio:20822599 Uniprot:Q5ZLH1
Length = 267
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 61/262 (23%), Positives = 116/262 (44%)
Query: 4 GEFDXXXXXXXXXXMPSQATTVPDPSSSFSKNRN-VRTLLPMTVKQXXXXXXXXXXXXXI 62
G FD + P + + K R+ ++++P TV Q
Sbjct: 6 GNFDGGYGPAGGYTQSPGGFSSPTGAQAEKKQRSRSQSIVPCTVSQLLAAEQVDEAFRIH 65
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
D +++ +TVVGIV + ++ +DD T ++ +W +E + G YV
Sbjct: 66 D-VEISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGSENIVVPPGTYV 124
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V GHL++FQ+K+SL A+ + P+ + NE T+H +E + + + +S PQ S
Sbjct: 125 KVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLTLASRAPQSFTSA 184
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLME 240
+ + + + VL+ ++ + G+ + QL N+ + + +
Sbjct: 185 GMSDVGGYGGGSLPVNGLTAHQSQVLNLIKNCH---SPEGMSLQELKLQLHNVSIPTIKQ 241
Query: 241 ALESLNENSLVYS-IDEFHYKS 261
A+E L+ +YS +D+ HYKS
Sbjct: 242 AVEFLSSEGHIYSTVDDDHYKS 263
>UNIPROTKB|E2RQP7 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 OMA:GGNSFMP InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949
GeneTree:ENSGT00390000010045 EMBL:AAEX03001704
Ensembl:ENSCAFT00000019035 NextBio:20860941 Uniprot:E2RQP7
Length = 293
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 58/246 (23%), Positives = 121/246 (49%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 54 PTPSQAEKKSRARAQHIVPCTISQLLSATLVDEMFK-IGNVEISQVTIVGIIRHAEKAPT 112
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 113 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 172
Query: 144 IIDFNEITSHFVECIYVQLY----NTRLRGGSS--NQPQMTNSNHLKEYNAISSNHYSFD 197
+ D NE T+H +E + + N++ G + + P M + + ++I +N +
Sbjct: 173 LEDMNEFTAHILEVVNAHMILSKSNSQPPAGRAPISNPGMGETGNFGGISSIPANGLTVA 232
Query: 198 EGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-ID 255
+ + ++ ++ RPE G++ + QL ++ + + +A++ L+ +YS +D
Sbjct: 233 QNQVLN--LIKACPRPE------GLNFQDLKNQLQHMSVASIKQAVDFLSNEGHIYSTVD 284
Query: 256 EFHYKS 261
+ H+KS
Sbjct: 285 DDHFKS 290
>UNIPROTKB|Q5Z8L1 [details] [associations]
symbol:P0550B04.15 "Putative replication protein A2"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AP003770 ProteinModelPortal:Q5Z8L1
IntAct:Q5Z8L1 KEGG:dosa:Os06t0693300-01 Gramene:Q5Z8L1
Uniprot:Q5Z8L1
Length = 438
Score = 215 (80.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 45/131 (34%), Positives = 73/131 (55%)
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYV 121
IDG + + V+G V + ++ F +DD TG+I RW +Q + + + I +G+YV
Sbjct: 78 IDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYV 137
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V +L FQ K+ A S+RPI +FNE+ HF+EC++V L + + S Q Q+ S
Sbjct: 138 KVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ----SKMQRQLPPSV 193
Query: 182 HLKEYNAISSN 192
EY + S+
Sbjct: 194 QTNEYTHVPSS 204
>UNIPROTKB|Q2KI86 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019903 "protein phosphatase binding" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0010569 eggNOG:COG5235
KO:K10739 OMA:GGNSFMP InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 CTD:6118 HOGENOM:HOG000216562
HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T GeneTree:ENSGT00390000010045
EMBL:DAAA02006344 EMBL:DAAA02006342 EMBL:DAAA02006343 EMBL:BC112729
IPI:IPI00701334 RefSeq:NP_001039449.1 UniGene:Bt.17362 SMR:Q2KI86
STRING:Q2KI86 Ensembl:ENSBTAT00000008174 GeneID:507912
KEGG:bta:507912 InParanoid:Q2KI86 NextBio:20868270 Uniprot:Q2KI86
Length = 270
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 62/244 (25%), Positives = 122/244 (50%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P S + K+R + ++P T+ Q I +++ +T+VGI+ + +
Sbjct: 30 PTASQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRNAEKAAT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGG-SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
+ D NE T+H +E + + ++ S+ + ++N + E N++ G ++
Sbjct: 149 LEDMNEFTTHILEVVNAHMMLSKSNSQPSAGRAPISNPG-MGEAGNFGGNNFIPANGLTV 207
Query: 203 DQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEF 257
Q VL+ ++ RPE L N + +N + Q +++ KL A++ L+ +YS +D+
Sbjct: 208 AQNQVLNLIKACPRPEGL-NFQDL-KNQL-QHMSVASIKL--AVDFLSNEGHIYSTVDDD 262
Query: 258 HYKS 261
H+KS
Sbjct: 263 HFKS 266
>SGD|S000005256 [details] [associations]
symbol:RFA2 "Subunit of heterotrimeric Replication Protein A
(RPA)" species:4932 "Saccharomyces cerevisiae" [GO:0000781
"chromosome, telomeric region" evidence=IMP] [GO:0005662 "DNA
replication factor A complex" evidence=IDA] [GO:0000722 "telomere
maintenance via recombination" evidence=IPI] [GO:0007004 "telomere
maintenance via telomerase" evidence=IMP] [GO:0045184
"establishment of protein localization" evidence=IMP] [GO:0006260
"DNA replication" evidence=IEA;IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IGI] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006268
"DNA unwinding involved in replication" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IPI] [GO:0006312 "mitotic recombination" evidence=IPI]
InterPro:IPR004365 Pfam:PF01336 SGD:S000005256 GO:GO:0043565
EMBL:BK006947 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0045184 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0000781 GO:GO:0007131 EMBL:Z46259 GO:GO:0007004 GO:GO:0000722
GO:GO:0006289 GO:GO:0006268 GO:GO:0005662 EMBL:Z71588 GO:GO:0030491
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 GeneTree:ENSGT00390000010045
OrthoDB:EOG4F21C7 EMBL:X59749 EMBL:S64861 PIR:B37281
RefSeq:NP_014087.1 ProteinModelPortal:P26754 SMR:P26754
DIP:DIP-2518N IntAct:P26754 MINT:MINT-643412 STRING:P26754
PaxDb:P26754 PeptideAtlas:P26754 EnsemblFungi:YNL312W GeneID:855404
KEGG:sce:YNL312W CYGD:YNL312w HOGENOM:HOG000248662 OMA:QGFIYPT
NextBio:979235 Genevestigator:P26754 GermOnline:YNL312W
Uniprot:P26754
Length = 273
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 65/251 (25%), Positives = 114/251 (45%)
Query: 28 PSSSFSK-NRNVRTLLPMTVKQXXXXXXXXXXXXXID-GADVNTITVVGIVCDMQDKEPQ 85
P S S+ N V TL P+T+KQ + +++ + VG+V ++ D
Sbjct: 25 PGSGESETNTRVNTLTPVTIKQILESKQDIQDGPFVSHNQELHHVCFVGVVRNITDHTAN 84
Query: 86 FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM--------------YVRVYGHLKAFQ 131
I+DGTG+IE +W+ + + N S G YV+V+G LK F
Sbjct: 85 IFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYGSQVAQQFEIGGYVKVFGALKEFG 144
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISS 191
K+++ ++PI FNE+ +H +E I + G QP + SN+ + +
Sbjct: 145 GKKNIQYAVIKPIDSFNEVLTHHLEVIKCH----SIASGMMKQPLESASNNNGQSLFVKD 200
Query: 192 NHYSFDEGKSIDQMVLDFLRRP-EFL-ANNNGVHRNVISQQLNLPMDKLMEALESLNENS 249
++ + G S Q +L+F ++ E AN+ V +ISQ LNL + +L +
Sbjct: 201 DNDT-SSGSSPLQRILEFCKKQCEGKDANSFAVPIPLISQSLNLDETTVRNCCTTLTDQG 259
Query: 250 LVY-SIDEFHY 259
+Y + D+ ++
Sbjct: 260 FIYPTFDDNNF 270
>CGD|CAL0006323 [details] [associations]
symbol:RFA2 species:5476 "Candida albicans" [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA;IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA;IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0030491 "heteroduplex formation" evidence=IEA]
[GO:0007004 "telomere maintenance via telomerase" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IEA] [GO:0045184 "establishment of protein
localization" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR004365 Pfam:PF01336 CGD:CAL0006323
EMBL:AACQ01000095 EMBL:AACQ01000096 GO:GO:0003676
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 HOGENOM:HOG000248662
RefSeq:XP_714795.1 RefSeq:XP_714857.1 STRING:Q59Z33 GeneID:3643506
GeneID:3643586 KEGG:cal:CaO19.2267 KEGG:cal:CaO19.9807
Uniprot:Q59Z33
Length = 272
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 62/244 (25%), Positives = 108/244 (44%)
Query: 29 SSSFSKNRNVR-TLLPMTVKQXXXXXXXX-XXXXXIDGADVNTITVVGIVCDMQDKEPQF 86
SS VR +L P+T+KQ ++ ++N I+ VG+V ++++
Sbjct: 29 SSQRQTTTQVRQSLTPVTIKQINDATQPVPDGEFKVNNVELNMISFVGVVRNVENTNASI 88
Query: 87 IFLIDDGTGRIECSRWAHEQM-----EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
I+DGTG I+ +W E + +F + N++ KG YV V G LK F +++++ S+
Sbjct: 89 AVTIEDGTGSIDVRKWVDETISSAEEDFEKYNEM-KGKYVYVGGSLKQFNNRKTVQNASI 147
Query: 142 RPIIDFNEITSHFVECIYVQLYN---TRLRGGSSNQPQMTNSNHLKEYNAISSNHYSF-- 196
I D N+I H + I L T S+ Q TNS N S
Sbjct: 148 SLITDSNQIVYHHLSAIEHHLKAQGITAADAASAGAGQATNSTASAGSGLFMDNPTSLSK 207
Query: 197 DEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-ID 255
D G DQ++ + + GV + ++++L++ ++ L LN+ Y+ D
Sbjct: 208 DTGSLTDQVIAVLKEASRTMPD--GVPVDYVAEKLSITKEESQFQLLKLNDEGKAYAGYD 265
Query: 256 EFHY 259
+ Y
Sbjct: 266 DNSY 269
>UNIPROTKB|Q59Z33 [details] [associations]
symbol:RFA2 "Putative uncharacterized protein RFA2"
species:237561 "Candida albicans SC5314" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] InterPro:IPR004365
Pfam:PF01336 CGD:CAL0006323 EMBL:AACQ01000095 EMBL:AACQ01000096
GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 HOGENOM:HOG000248662
RefSeq:XP_714795.1 RefSeq:XP_714857.1 STRING:Q59Z33 GeneID:3643506
GeneID:3643586 KEGG:cal:CaO19.2267 KEGG:cal:CaO19.9807
Uniprot:Q59Z33
Length = 272
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 62/244 (25%), Positives = 108/244 (44%)
Query: 29 SSSFSKNRNVR-TLLPMTVKQXXXXXXXX-XXXXXIDGADVNTITVVGIVCDMQDKEPQF 86
SS VR +L P+T+KQ ++ ++N I+ VG+V ++++
Sbjct: 29 SSQRQTTTQVRQSLTPVTIKQINDATQPVPDGEFKVNNVELNMISFVGVVRNVENTNASI 88
Query: 87 IFLIDDGTGRIECSRWAHEQM-----EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
I+DGTG I+ +W E + +F + N++ KG YV V G LK F +++++ S+
Sbjct: 89 AVTIEDGTGSIDVRKWVDETISSAEEDFEKYNEM-KGKYVYVGGSLKQFNNRKTVQNASI 147
Query: 142 RPIIDFNEITSHFVECIYVQLYN---TRLRGGSSNQPQMTNSNHLKEYNAISSNHYSF-- 196
I D N+I H + I L T S+ Q TNS N S
Sbjct: 148 SLITDSNQIVYHHLSAIEHHLKAQGITAADAASAGAGQATNSTASAGSGLFMDNPTSLSK 207
Query: 197 DEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-ID 255
D G DQ++ + + GV + ++++L++ ++ L LN+ Y+ D
Sbjct: 208 DTGSLTDQVIAVLKEASRTMPD--GVPVDYVAEKLSITKEESQFQLLKLNDEGKAYAGYD 265
Query: 256 EFHY 259
+ Y
Sbjct: 266 DNSY 269
>UNIPROTKB|Q5TEJ7 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR004365 Pfam:PF01336
GO:GO:0005634 GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AL109927 UniGene:Hs.79411 HGNC:HGNC:10290
HOGENOM:HOG000216562 HOVERGEN:HBG000086 ChiTaRS:RPA2
IPI:IPI00646957 SMR:Q5TEJ7 MINT:MINT-1373080 STRING:Q5TEJ7
Ensembl:ENST00000444045 Uniprot:Q5TEJ7
Length = 179
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ Q I +++ +T+VGI+ +
Sbjct: 34 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPT 92
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 93 NIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 152
Query: 144 IIDFNEITSHFVECI 158
+ D NE T+H +E I
Sbjct: 153 LEDMNEFTTHILEVI 167
>ZFIN|ZDB-GENE-010131-3 [details] [associations]
symbol:rpa2 "replication protein A2" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 ZFIN:ZDB-GENE-010131-3
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HSSP:P15927
KO:K10739 InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 CTD:6118 HOGENOM:HOG000216562 HOVERGEN:HBG000086
EMBL:AY007304 IPI:IPI00498507 RefSeq:NP_571786.1 UniGene:Dr.33922
ProteinModelPortal:Q9DDG4 SMR:Q9DDG4 STRING:Q9DDG4 PRIDE:Q9DDG4
GeneID:65226 KEGG:dre:65226 InParanoid:Q9DDG4 NextBio:20902023
ArrayExpress:Q9DDG4 Bgee:Q9DDG4 Uniprot:Q9DDG4
Length = 272
Score = 176 (67.0 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 63/251 (25%), Positives = 118/251 (47%)
Query: 28 PSSSFSKNRNVRT----LLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKE 83
P++S ++ RT ++P TV Q + ++ +T+VG++
Sbjct: 25 PAASQGGDKKGRTRAQQIVPCTVSQLLSAVQAEDVFK-VGEVEIAQVTIVGVIRSTDKST 83
Query: 84 PQFIFLIDDGTGR-IECSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
+ +DD T ++ +W E M + + I G YV+V G+L++FQ+ RSL A+S+
Sbjct: 84 INIQYKVDDMTAAPMDVKQWIDTEDMGVDN-SVIPPGSYVKVSGNLRSFQNNRSLVAFSV 142
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLR--GGSSNQ-PQMTNS-NHLKEYNAISSNHYSFD 197
R + D NE+TSH +E + L ++ + GG P NS N + S +
Sbjct: 143 RVLEDMNEVTSHMLEVVNAHLQQSKPQNMGGDERMMPVSHNSMNSMGTTGGYSGANMMLV 202
Query: 198 EGKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESL-NE-NSLVYS 253
G S Q VL ++ + L G+ + + Q+LN + + + + ++ L NE + V+
Sbjct: 203 NGLSATQNQVLSLIKSCQEL---QGISMHELKQKLNSMSANVIRQTVDFLSNEGHQYVHQ 259
Query: 254 IDEFHYKSAVN 264
++ ++S N
Sbjct: 260 SEKDPFRSTDN 270
>UNIPROTKB|Q13156 [details] [associations]
symbol:RPA4 "Replication protein A 30 kDa subunit"
species:9606 "Homo sapiens" [GO:0006289 "nucleotide-excision
repair" evidence=IDA] [GO:0033260 "DNA replication involved in S
phase" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0000077 "DNA damage checkpoint" evidence=IDA] [GO:0005662 "DNA
replication factor A complex" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006270 "DNA
replication initiation" evidence=TAS] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=TAS] [GO:0000216 "M/G1 transition
of mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell
cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0000077 Reactome:REACT_115566
GO:GO:0005654 Reactome:REACT_21300 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006270 GO:GO:0003697 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000216 GO:GO:0006289
Reactome:REACT_383 EMBL:Z86061 GO:GO:0005662 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949
HOGENOM:HOG000216562 HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T
EMBL:U24186 EMBL:AF494047 EMBL:BC069791 EMBL:BC069808 EMBL:BC069824
EMBL:BC104013 EMBL:BC104014 IPI:IPI00011917 RefSeq:NP_037479.1
UniGene:Hs.659349 ProteinModelPortal:Q13156 SMR:Q13156
DIP:DIP-24241N IntAct:Q13156 STRING:Q13156 PhosphoSite:Q13156
DMDM:14917036 PRIDE:Q13156 DNASU:29935 Ensembl:ENST00000373040
GeneID:29935 KEGG:hsa:29935 UCSC:uc004efv.4 CTD:29935
GeneCards:GC0XP096139 HGNC:HGNC:30305 MIM:300767 neXtProt:NX_Q13156
PharmGKB:PA134988548 eggNOG:NOG325006 InParanoid:Q13156 KO:K10741
OMA:VGVYAKV GenomeRNAi:29935 NextBio:52579 Bgee:Q13156
CleanEx:HS_RPA4 Genevestigator:Q13156 GermOnline:ENSG00000204086
Uniprot:Q13156
Length = 261
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 50/228 (21%), Positives = 101/228 (44%)
Query: 38 VRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR- 96
++ ++P V Q + G V+ +++VG++ + + IDD T +
Sbjct: 43 IQDVVPCNVNQLLSSTVFDPVFK-VRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKP 101
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
IE +W + + +V +S G+YV+V+G LK +SL + + D NE T H +E
Sbjct: 102 IEARQWFGRE-KVKQVTPLSVGVYVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILE 160
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR-PEF 215
+ + + R ++ + + + + + +H +F I VL + P
Sbjct: 161 TVNAHMMLDKARRDTTVESVPVSPSEVNDAGDNDESHRNF-----IQDEVLRLIHECPH- 214
Query: 216 LANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSA 262
+H + +Q +L + + EA++ L +Y ++D H+KSA
Sbjct: 215 -QEGKSIHE-LRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>FB|FBgn0032906 [details] [associations]
symbol:RPA2 "Replication protein A2" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005662
"DNA replication factor A complex" evidence=ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=ISS] [GO:0022008
"neurogenesis" evidence=IMP] GO:GO:0022008 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 HSSP:P15927 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 EMBL:AY089651
ProteinModelPortal:Q8SXG3 SMR:Q8SXG3 STRING:Q8SXG3 PRIDE:Q8SXG3
FlyBase:FBgn0032906 InParanoid:Q8SXG3 OrthoDB:EOG476HG5
ArrayExpress:Q8SXG3 Bgee:Q8SXG3 Uniprot:Q8SXG3
Length = 246
Score = 134 (52.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 53/242 (21%), Positives = 108/242 (44%)
Query: 24 TVPDPSSSFSKNRNVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKE 83
T P ++S K + +P+ VKQ + G VV IV +++
Sbjct: 13 TAPTGAASNQKGEGI---VPLVVKQIVDAPEGNIE---LFGMQYAMACVVAIVRNVETSS 66
Query: 84 PQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ + ++D +GRI+ W E+ + + ++ YV+VYG ++ ++L + L P
Sbjct: 67 TKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLP 125
Query: 144 IIDFNEITSHFVECIYVQLY--NTRLRGGS-SNQPQMTNSNHLKEYNAISSNHY-SFDEG 199
I+D NE+ +H +E + + + + +GG+ + + S + ++ A S+ S E
Sbjct: 126 ILDPNEVCTHLLEVLNARYRAEDCQSKGGAGAGAGASSGSGSIADFTASQSSAIVSGLEP 185
Query: 200 KSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMD-KLMEALE-SLNENSLVYSIDEF 257
K Q V ++ + G+ R + + + D +L L+ ++E + SID
Sbjct: 186 KQ--QAVFQAIKSN---VSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDAD 240
Query: 258 HY 259
H+
Sbjct: 241 HF 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 265 242 0.00096 113 3 11 22 0.43 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 596 (63 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.82u 0.09s 21.91t Elapsed: 00:00:01
Total cpu time: 21.83u 0.09s 21.92t Elapsed: 00:00:01
Start: Fri May 10 14:42:35 2013 End: Fri May 10 14:42:36 2013