BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024592
(265 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359485014|ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
Length = 275
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/275 (51%), Positives = 196/275 (71%), Gaps = 10/275 (3%)
Query: 1 MYS-GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSE--LSSNDE 57
MYS +FDG AAF+GGGFMPSQAT +P S ++NR+ + LLP+TVKQ+SE LSS+D+
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 58 SSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK 117
S+ IDG +VN +T+VG+V + ++ F++DDGTGRI+C+RW +E ++ E+ I
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120
Query: 118 GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQM 177
GMYVRV+GHLK FQ KR LN +S+RP+ DFNEI SHF+ECIYV +YNT+ R G Q +
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRAGGPTQSHV 180
Query: 178 TN---SNHLKEYNAISSNHYSFDEG---KSIDQMVLDFLRRPEFLANNNGVHRNVISQQL 231
TN LK Y A N +S G K +DQ+V+D+L++P+ LA + GV R+ ++QQL
Sbjct: 181 TNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQL 240
Query: 232 NLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
N+P+DK+ME++ SL E L+YS IDE+HYKS N
Sbjct: 241 NVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 275
>gi|297735401|emb|CBI17841.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 197/277 (71%), Gaps = 12/277 (4%)
Query: 1 MYS-GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSE--LSSNDE 57
MYS +FDG AAF+GGGFMPSQAT +P S ++NR+ + LLP+TVKQ+SE LSS+D+
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 58 SSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK 117
S+ IDG +VN +T+VG+V + ++ F++DDGTGRI+C+RW +E ++ E+ I
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120
Query: 118 GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT--RLRGGSSNQP 175
GMYVRV+GHLK FQ KR LN +S+RP+ DFNEI SHF+ECIYV +YNT R++ G Q
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQS 180
Query: 176 QMTN---SNHLKEYNAISSNHYSFDEG---KSIDQMVLDFLRRPEFLANNNGVHRNVISQ 229
+TN LK Y A N +S G K +DQ+V+D+L++P+ LA + GV R+ ++Q
Sbjct: 181 HVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDELAQ 240
Query: 230 QLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
QLN+P+DK+ME++ SL E L+YS IDE+HYKS N
Sbjct: 241 QLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277
>gi|449457165|ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
sativus]
gi|449500253|ref|XP_004161048.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
sativus]
Length = 277
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/278 (51%), Positives = 197/278 (70%), Gaps = 14/278 (5%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSE--LSSNDES 58
MY+ +FDG AAF+GGGFMPSQ T PD S S +KNR+V+ LLP+TVKQ+++ LSS+D+S
Sbjct: 1 MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
Query: 59 SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKG 118
+ IDG DVN + +VG+V + + F +DDGTGRI+CS+W +E + NEV I G
Sbjct: 61 NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN----Q 174
MYVRV+GHLK+FQ KR+LN +S+RP+ D+NEIT+HF+E IYV YNTRLR S+ Q
Sbjct: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180
Query: 175 PQMTN--SNHLKEYNAISSNHYSFDEG----KSIDQMVLDFLRRPEFLANNNGVHRNVIS 228
PQMTN + +K Y A +N Y+ G KS++QMVLDFL+ P + G HR+VI+
Sbjct: 181 PQMTNLSNTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPS-CDSERGAHRDVIA 239
Query: 229 QQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
QQL +P++KL+ A+++L E L+YS D+FH+KS N
Sbjct: 240 QQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG 277
>gi|224143708|ref|XP_002325047.1| predicted protein [Populus trichocarpa]
gi|222866481|gb|EEF03612.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 193/274 (70%), Gaps = 11/274 (4%)
Query: 1 MY-SGEFDG-AAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDES 58
MY S +FDG AAAF GGGFMP+Q P SSS SKNR R L P+TVKQ+S L+SN+ES
Sbjct: 1 MYGSSQFDGSAAAFMGGGFMPTQTAHPPSDSSSISKNREARCLFPLTVKQISNLASNNES 60
Query: 59 SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKG 118
+ IDGA+VN +T+VG V +DK ++ FL+DDGTG+IEC++W E ++ ++ +I G
Sbjct: 61 NFIIDGAEVNNVTIVGRVSHKEDKASEYTFLVDDGTGQIECTKWVQESLDTEQMGEILVG 120
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMT 178
MYVRV+GHL+ Q +R LN +S+RP+ DFNEI HF+ECIYV YNTRL+G +S QP +
Sbjct: 121 MYVRVHGHLRGLQGRRFLNVFSIRPVTDFNEIPGHFIECIYVHFYNTRLQGVTS-QPPVA 179
Query: 179 NSNH--LKEYNAI----SSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN 232
NS LK Y SS + S D ++ QM+L+FL++P +L N G H +VI++QLN
Sbjct: 180 NSTSIPLKGYQTAPPYQSSVYSSADGLNNVSQMILNFLQQPAYL-NTEGAHYDVIARQLN 238
Query: 233 LPMDKLMEALESLNENSLVY-SIDEFHYKSAVNA 265
+PM+KL E L+ L +N LVY +I++ +YKS VNA
Sbjct: 239 IPMNKLKEELQMLVDNGLVYTTINDDYYKSTVNA 272
>gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT_477538 [Arabidopsis lyrata subsp.
lyrata]
gi|297330185|gb|EFH60604.1| hypothetical protein ARALYDRAFT_477538 [Arabidopsis lyrata subsp.
lyrata]
Length = 278
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 184/278 (66%), Gaps = 13/278 (4%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
MY GEFDG AAFAGGGFMPSQATT SSS KNR+VRTLLP+T+KQLS S+ ES+
Sbjct: 1 MYGGEFDGNAAFAGGGFMPSQATTQAHDSSSSLKNRDVRTLLPLTLKQLSSASTTGESNF 60
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
SIDG D+NT+ +VG + M+++ Q F++DDGTG ++C RW E+ E E+ + GMY
Sbjct: 61 SIDGVDINTVAIVGRISRMENRITQVEFVVDDGTGWVDCVRWCQERQETEEMEAVKLGMY 120
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQ------ 174
VR++GHLK FQ KRS+N +S+RP+ DFNEI HF EC+YV +YNT+LRGGS Q
Sbjct: 121 VRLHGHLKIFQGKRSVNVFSIRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQATTTPR 180
Query: 175 PQM---TNSNHLKEYNAISSNHYS---FDEGKSIDQMVLDFLRRPEFLANNNGVHRNVIS 228
PQM T K Y SN + D + Q VL++L +P L + GVH ++I+
Sbjct: 181 PQMPYSTMPTPAKPYQTGPSNQFPNQFNDPMHGVKQTVLNYLNQPMHLVSEAGVHCDIIA 240
Query: 229 QQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
+ L +P+ ++ +ALE L+ + +YS +DE +KS NA
Sbjct: 241 RDLRIPLPQVKDALEQLSNDGCIYSTMDETCFKSTANA 278
>gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis thaliana]
gi|75330048|sp|Q8LFJ8.1|RFA2B_ARATH RecName: Full=Replication protein A 32 kDa subunit B;
Short=AtRPA32B; Short=RP-A p32 B; AltName: Full=DNA
replication protein A2 subunit B; AltName:
Full=Replication factor A protein 2 B; Short=AtRPA2 B;
Short=RF-A protein 2 B; AltName: Full=Replicon protein
A2 B
gi|21537031|gb|AAM61372.1| putative replication factor A [Arabidopsis thaliana]
gi|26450657|dbj|BAC42439.1| putative replication factor A [Arabidopsis thaliana]
gi|90186248|gb|ABD91500.1| At3g02920 [Arabidopsis thaliana]
gi|332640358|gb|AEE73879.1| replication factor A2 [Arabidopsis thaliana]
Length = 278
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/278 (48%), Positives = 184/278 (66%), Gaps = 13/278 (4%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
MY G+FDG AAFAGGGFMPSQATT SSS KNR+VRTLLP+T+KQLS S+ ES+
Sbjct: 1 MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGESNF 60
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
SIDG D+ T+ +VG + M+++ Q F++DDGTG ++C RW H + E E+ + GMY
Sbjct: 61 SIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMY 120
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQ------ 174
VR++GHLK FQ KRS+N +S+RP+ DFNEI HF EC+YV +YNT+LRGGS Q
Sbjct: 121 VRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPR 180
Query: 175 PQM---TNSNHLKEYNAISSNHYS---FDEGKSIDQMVLDFLRRPEFLANNNGVHRNVIS 228
PQM T K Y SN + D + Q VL++L +P + + GVH ++I+
Sbjct: 181 PQMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIA 240
Query: 229 QQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
++L +P+ ++ EALE L+ + +YS +DE +KS NA
Sbjct: 241 RELRIPLLQVKEALEQLSNDGCIYSTLDETCFKSTANA 278
>gi|6728969|gb|AAF26967.1|AC018363_12 putative replication factor A [Arabidopsis thaliana]
Length = 282
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 184/282 (65%), Gaps = 17/282 (6%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
MY G+FDG AAFAGGGFMPSQATT SSS KNR+VRTLLP+T+KQLS S+ ES+
Sbjct: 1 MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGESNF 60
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
SIDG D+ T+ +VG + M+++ Q F++DDGTG ++C RW H + E E+ + GMY
Sbjct: 61 SIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMY 120
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQ------ 174
VR++GHLK FQ KRS+N +S+RP+ DFNEI HF EC+YV +YNT+LRGGS Q
Sbjct: 121 VRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPR 180
Query: 175 PQM---TNSNHLKEYNAISSNHYSF-------DEGKSIDQMVLDFLRRPEFLANNNGVHR 224
PQM T K Y SN F D + Q VL++L +P + + GVH
Sbjct: 181 PQMPYSTMPTPAKPYQTGPSNQNLFQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHC 240
Query: 225 NVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
++I+++L +P+ ++ EALE L+ + +YS +DE +KS NA
Sbjct: 241 DIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFKSTANA 282
>gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/280 (48%), Positives = 190/280 (67%), Gaps = 15/280 (5%)
Query: 1 MYSG--EFDGAAAFAGGGFMPSQAT-TVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSN 55
MY G +FDG AAF+GGGFMPSQAT T D S S +KNR+ +TL+P+TVKQ+SE SS+
Sbjct: 20 MYGGNNQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSD 79
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
D+++ IDG DVN + +VGI+ + + F++DDGTGR++C RW +E ++ E+ +
Sbjct: 80 DKTNFLIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEAL 139
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGG----- 170
+ G+YVRV+GHLK FQ K+ L AYS+RP+ D+NEI SHF E IYV YN+RLR
Sbjct: 140 TNGIYVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSF 199
Query: 171 -SSNQPQMTNSNHLKEYNAISSNH---YSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNV 226
S+ P + + LK Y A +SN ++ D + +MVLD+L++P LA GVHRN
Sbjct: 200 MSAQVPSSSFNTPLKGYQASASNQFPGFNMDGIGGVHKMVLDYLQQPSCLALEKGVHRNE 259
Query: 227 ISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
++QQL +P +K+M A+E+L LVYS ID+FHYKS NA
Sbjct: 260 LAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGNA 299
>gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidopsis thaliana]
gi|332640359|gb|AEE73880.1| replication factor A2 [Arabidopsis thaliana]
Length = 298
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 186/298 (62%), Gaps = 33/298 (11%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSS-----------FS---------KNRNVRT 40
MY G+FDG AAFAGGGFMPSQATT SSS FS +NR+VRT
Sbjct: 1 MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKVYVSDSRRFSGISAAKSSIRNRDVRT 60
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECS 100
LLP+T+KQLS S+ ES+ SIDG D+ T+ +VG + M+++ Q F++DDGTG ++C
Sbjct: 61 LLPLTLKQLSSASTTGESNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCV 120
Query: 101 RWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV 160
RW H + E E+ + GMYVR++GHLK FQ KRS+N +S+RP+ DFNEI HF EC+YV
Sbjct: 121 RWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYV 180
Query: 161 QLYNTRLRGGSSNQ------PQM---TNSNHLKEYNAISSNHYS---FDEGKSIDQMVLD 208
+YNT+LRGGS Q PQM T K Y SN + D + Q VL+
Sbjct: 181 HMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLN 240
Query: 209 FLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAVNA 265
+L +P + + GVH ++I+++L +P+ ++ EALE L+ + +YS +DE +KS NA
Sbjct: 241 YLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFKSTANA 298
>gi|224126075|ref|XP_002329655.1| predicted protein [Populus trichocarpa]
gi|222870536|gb|EEF07667.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/277 (49%), Positives = 189/277 (68%), Gaps = 14/277 (5%)
Query: 1 MYSG-EFDG-AAAFAGGGFMPSQATTVPDPSSSFS---KNRNVRTLLPMTVKQLSELSSN 55
M+ G EFDG AAAF GGGFMP+Q+ SS KNR R L P+TVKQ++ L+SN
Sbjct: 1 MHGGSEFDGSAAAFMGGGFMPTQSALPSSSDSSSFSISKNREARCLFPLTVKQINNLTSN 60
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
DES+ IDGA+VN +T+VG V +DK ++ FLIDDGTG+IEC++W E ++ ++ +I
Sbjct: 61 DESNLIIDGAEVNNVTIVGRVSHKEDKASEYSFLIDDGTGQIECTQWVQESLDTEQMGEI 120
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP 175
GMYVRV+GHL+ Q +R LN +S+RP+ DFNE+ +HF+ECIYV YNTR+RG ++ QP
Sbjct: 121 LVGMYVRVHGHLRGLQGRRFLNVFSIRPVTDFNEVPNHFIECIYVHFYNTRIRGVTA-QP 179
Query: 176 QMTNSNH--LKEYNAI----SSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQ 229
+ NS + LK Y A SS + S D + QM+L+FL++P +L G H + I+
Sbjct: 180 PVANSTNTSLKGYQAAPPYQSSAYSSADGLNNASQMILNFLQQPSYLY-TEGAHYDAIAG 238
Query: 230 QLNLPMDKLMEALESLNENSLVY-SIDEFHYKSAVNA 265
QLN+P DKL E L+ L +N LVY +I++ +YKS VNA
Sbjct: 239 QLNIPTDKLKEVLQVLVDNGLVYTTINDDYYKSTVNA 275
>gi|356546205|ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 277
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 175/277 (63%), Gaps = 12/277 (4%)
Query: 1 MYSG--EFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQL--SELSSND 56
MYS +FDG AAF+GGGFMPSQ T PD S SKNR+ ++LLP+TVKQ+ + SS+D
Sbjct: 1 MYSSASQFDGNAAFSGGGFMPSQTTQGPDSSFVPSKNRDAQSLLPLTVKQIYDASQSSDD 60
Query: 57 ESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQIS 116
+ + IDG DV +T+VG V + + F++DDGTGRIEC++W HE ++ NE I
Sbjct: 61 KINLIIDGVDVTNVTLVGRVSNKAGRITDVTFVLDDGTGRIECNKWLHEAVDTNEAEAIL 120
Query: 117 KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQ 176
+GMY R++G LK FQ KR+LN +S RP+ DFNEI SHF +CIYV LYN++LR NQ
Sbjct: 121 EGMYARLHGQLKHFQGKRTLNVFSFRPVTDFNEIASHFTDCIYVHLYNSKLRTSVPNQQH 180
Query: 177 MT--------NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVIS 228
+ + + N S H + +G +++ MVLDFL P + N GVHR+ I+
Sbjct: 181 SSPIPPTIGYQAQVVPPTNQFSDQHVNGQKGVTVEAMVLDFLHHPANSSRNEGVHRDHIA 240
Query: 229 QQLNLPMDKLMEALESLNENSLVYSIDEFHYKSAVNA 265
Q L + +DKLM A+++L + +Y HYKS +N
Sbjct: 241 QHLGISLDKLMLAVKNLIDEGAIYETIGDHYKSIING 277
>gi|224121196|ref|XP_002330767.1| predicted protein [Populus trichocarpa]
gi|222872569|gb|EEF09700.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 174/279 (62%), Gaps = 19/279 (6%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRT---------LLPMTVKQLSELS 53
S +FD +AF+GGGFMPSQ+T + D + S +K + ++P+TVKQ+S+ S
Sbjct: 4 SSQFDATSAFSGGGFMPSQSTQLTDSTPSPAKASLLSLSLSSRNSLGVVPVTVKQISQAS 63
Query: 54 -SNDE-SSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNE 111
S DE SS I+G DV +TVVG+V + +K F+IDDGTGRI C RW E + E
Sbjct: 64 QSGDEKSSFVINGVDVTNVTVVGMVFNKAEKSTDVSFVIDDGTGRIGCRRWVTENFDKLE 123
Query: 112 VNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS 171
+ + GMYVRV GHL+ FQD + L A+S+RP+ +F+EIT HF++CI+ L N++L+GG+
Sbjct: 124 MEAVQDGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITFHFIDCIHSHLQNSKLQGGA 183
Query: 172 SNQPQMTNSNH---LKEYNAISSN----HYSFDEGKSIDQMVLDFLRRPEFLANNNGVHR 224
S Q M S+ ++ +SN + D K DQ+VLD L++ + G+H
Sbjct: 184 STQLHMVESSMNTPVRNGQTFTSNLMSKQFDVDGLKDCDQLVLDRLQQSSSIGQEKGMHM 243
Query: 225 NVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
+ + QQL LPM+K+ E++ SL + L+YS IDEFHYK+
Sbjct: 244 DELCQQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYKAT 282
>gi|357479633|ref|XP_003610102.1| Replication factor A protein [Medicago truncatula]
gi|355511157|gb|AES92299.1| Replication factor A protein [Medicago truncatula]
Length = 278
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 170/274 (62%), Gaps = 15/274 (5%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDES 58
M++ +FDG AAFAGGGFMPSQ + S + SKNR +TLLP+T+KQ++ SS+D +
Sbjct: 1 MHANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHALQSSDDRT 60
Query: 59 SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKG 118
+IDG VNT+T+VG VC+ + +F F++DDGTG IEC++W HE + V I G
Sbjct: 61 GLTIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILNG 120
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP-QM 177
MYVR+YG LK FQ K +L+ +SLRP+ DFNEI SHF+ECIYV LYN+RL+ ++ P Q
Sbjct: 121 MYVRLYGQLKGFQGK-TLSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQQ 179
Query: 178 TNSNHLK-------EYNAISSNHYSFDEG---KSIDQMVLDFLRRPEFLANNNGVHRNVI 227
N ++ + AI N +S KS+ ++VL++L P GV I
Sbjct: 180 HAPNSIQITPTKGYQAQAIPPNQFSGQHNNGQKSVQELVLEYLALPTIRELEGGVFCGTI 239
Query: 228 SQQLNLPMDK-LMEALESLNENSLVYSIDEFHYK 260
++QL + +D ++ AL+ L+ ++Y HYK
Sbjct: 240 AKQLGVSLDNDVIPALDLLSGEGVIYEGLPKHYK 273
>gi|388516063|gb|AFK46093.1| unknown [Medicago truncatula]
Length = 278
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 170/274 (62%), Gaps = 15/274 (5%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDES 58
M++ +FDG AAFAGGGFMPSQ + S + SKNR +TLLP+T+KQ++ SS+D +
Sbjct: 1 MHANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHAPQSSDDRT 60
Query: 59 SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKG 118
+IDG VNT+T+VG VC+ + +F F++DDGTG IEC++W HE + V I G
Sbjct: 61 GLTIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILNG 120
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP-QM 177
MYVR+YG LK FQ K +L+ +SLRP+ DFNEI SHF+ECIYV LYN+RL+ ++ P Q
Sbjct: 121 MYVRLYGQLKGFQGK-TLSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQQ 179
Query: 178 TNSNHLK-------EYNAISSNHYSFDEG---KSIDQMVLDFLRRPEFLANNNGVHRNVI 227
N ++ + AI N +S KS+ ++VL++L P GV I
Sbjct: 180 HAPNSIQITPTKGYQAQAIPPNQFSGQHNNGQKSVRELVLEYLALPTIRELEGGVFCGTI 239
Query: 228 SQQLNLPMDK-LMEALESLNENSLVYSIDEFHYK 260
++QL + +D ++ AL+ L+ ++Y HYK
Sbjct: 240 AKQLGVSLDNDVIPALDLLSGEGVIYEGLPKHYK 273
>gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
gi|223532593|gb|EEF34379.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
Length = 242
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 157/252 (62%), Gaps = 24/252 (9%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESS-ASIDGADVNTIT 71
GGGFM SQ++ D + S +K+R+ + L+P+TVKQ+S+ S S DE+S IDG DV +T
Sbjct: 12 GGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHSGDENSNYVIDGVDVTNVT 71
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQ 131
VVG+V D K F +DDGTGRI C RW +E + +E+ I GMYVRV GHL++FQ
Sbjct: 72 VVGMVFDKAQKVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQDGMYVRVSGHLRSFQ 131
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISS 191
R L A+S+RP+++F+E+T HF++CI+ L N++ Q T
Sbjct: 132 GVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSK--------SQFT------------- 170
Query: 192 NHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLV 251
YS D K DQ+VLD+L++ + G+H + +SQQL LPMDK+ E + SL + L+
Sbjct: 171 KQYSVDGLKDCDQLVLDYLQQSSSMGQEKGIHMDELSQQLKLPMDKIKETIRSLEDEGLI 230
Query: 252 YS-IDEFHYKSA 262
YS IDEFHYK+
Sbjct: 231 YSTIDEFHYKAT 242
>gi|449437074|ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus]
gi|449519474|ref|XP_004166760.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus]
Length = 271
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 170/277 (61%), Gaps = 27/277 (9%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSAS- 61
S +FD A+ GF SQ SS +K+R L+P+TVKQ+SE S + E A+
Sbjct: 4 STQFDSAS-----GFTSSQTN-----DSSSAKSRESPGLIPVTVKQISEASHSGEEKANF 53
Query: 62 -IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
I+G D+ +T+VG V + ++ F +DDGTG I C RW ++ + N++ +I GMY
Sbjct: 54 VINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMY 113
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR---LRGGSSNQPQM 177
VRV GHLK FQ + + A+S+RP+ +F+EIT HF+ECI+ L N++ L+G S Q Q
Sbjct: 114 VRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQT 173
Query: 178 TNS-----------NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNV 226
++S + +AI S ++ D KS D++VLD+L+ P +A G+H++
Sbjct: 174 SDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDE 233
Query: 227 ISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
+SQQL LPM+K+++++ SL + L+YS IDEFH+KSA
Sbjct: 234 LSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSA 270
>gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]
gi|297326427|gb|EFH56847.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]
Length = 279
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 168/279 (60%), Gaps = 28/279 (10%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDESSA 60
S +F+ +AF+GGGFM SQ + + SSS +KNR + L+P+TVKQ++E +S ++S
Sbjct: 4 SSQFEPNSAFSGGGFMSSQPSQAYESSSSTAKNREFQGLVPVTVKQITECFQTSGEKSGL 63
Query: 61 SIDGADVNTITVVGIVCDMQ-DKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM 119
I+G + +++VG+VCD K + F +DDGTGRI+C RW +E + E+ + G
Sbjct: 64 VINGISLTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNETFDAREMESVRDGT 123
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY----------------VQLY 163
YVRV GHLK FQ K L +S+RPI+DFNE+T H++ECI+ Q
Sbjct: 124 YVRVNGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQGQQVGDVTQSV 183
Query: 164 NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG-KSIDQMVLDFLRRPEFLANNNGV 222
NT +GGS N+N N + S+ + G K++D M+LD+L++P A G+
Sbjct: 184 NTTFQGGS-------NTNQATPLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGI 236
Query: 223 HRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYK 260
H + I+QQL +P +KL ++SL + L+YS IDE+H+K
Sbjct: 237 HIDEIAQQLKVPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275
>gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis thaliana]
gi|186502765|ref|NP_001118376.1| replicon protein A2 [Arabidopsis thaliana]
gi|75338841|sp|Q9ZQ19.2|RFA2A_ARATH RecName: Full=Replication protein A 32 kDa subunit A;
Short=AtRPA32A; Short=RP-A p32 A; AltName: Full=DNA
replication protein A2 subunit A; AltName: Full=Protein
SUPPRESSOR OF ROS1; AltName: Full=Replication factor A
protein 2 A; Short=AtRPA2 A; Short=RF-A protein 2 A;
AltName: Full=Replicon protein A2 A
gi|20197764|gb|AAD18120.2| putative replication protein A1 [Arabidopsis thaliana]
gi|21594953|gb|AAM66059.1| putative replication protein A1 [Arabidopsis thaliana]
gi|26450159|dbj|BAC42198.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28973057|gb|AAO63853.1| putative replication protein A1 [Arabidopsis thaliana]
gi|82621223|gb|ABB86293.1| DNA replication protein A2 subunit [Arabidopsis thaliana]
gi|330252488|gb|AEC07582.1| replicon protein A2 [Arabidopsis thaliana]
gi|330252489|gb|AEC07583.1| replicon protein A2 [Arabidopsis thaliana]
Length = 279
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 169/279 (60%), Gaps = 28/279 (10%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDESSA 60
S +F+ + F+GGGFM SQ + + SSS +KNR+ + L+P+TVKQ++E SS ++S
Sbjct: 4 SSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGL 63
Query: 61 SIDGADVNTITVVGIVCDM-QDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM 119
I+G + +++VG+VCD + K + F +DDGTGRI+C RW E + E+ + G
Sbjct: 64 VINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGT 123
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY----------------VQLY 163
YVR+ GHLK FQ K L +S+RPI+DFNE+T H++ECI+ Q
Sbjct: 124 YVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQSV 183
Query: 164 NTRLRGGS-SNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGV 222
NT +GGS +NQ + N +SS + + K++D M+LD+L++P A G+
Sbjct: 184 NTTFQGGSNTNQATLLNP-------VVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGI 236
Query: 223 HRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYK 260
H + I+QQL +P +KL ++SL + L+YS IDE+H+K
Sbjct: 237 HIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275
>gi|356563809|ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subunit-like [Glycine max]
Length = 277
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 178/278 (64%), Gaps = 17/278 (6%)
Query: 1 MYSG-EFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDES 58
M+SG +FD AF+GGGFM SQ +T+ D S + SK+R + L+P+TVKQ+SE S S DE
Sbjct: 1 MFSGSQFDATTAFSGGGFMSSQPSTLNDSSPAPSKSRETQGLVPVTVKQISEASQSGDEK 60
Query: 59 SA-SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK 117
S I+G D+N +T++G+V + ++ F++DDGTGRI+C RW +E + E+ +
Sbjct: 61 SNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEAVMN 120
Query: 118 GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT-RLRGGSS---- 172
GMYVRVYGHLK+FQ + L +S RP+ +F+EI HF++CI+ L + ++ G +S
Sbjct: 121 GMYVRVYGHLKSFQGVKQLVTFSARPVTNFDEIPFHFIDCIHNHLRSKIKMEGITSSNPS 180
Query: 173 -----NQPQMT--NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRN 225
N P + N + N +S+ H S D K ID++++D+L + +++ G+H +
Sbjct: 181 SGSSLNTPGKSAPNGSQAPSSNPVSAQH-SVDGLKGIDKLIMDYLEQHSDMSDGRGIHVD 239
Query: 226 VISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
+S++L LPM+K+ +L++L ++ +YS ID+ HYK A
Sbjct: 240 ELSRELKLPMEKIKLSLKTLADDGEIYSTIDDDHYKKA 277
>gi|356552567|ref|XP_003544637.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 292
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 174/276 (63%), Gaps = 15/276 (5%)
Query: 1 MYSG-EFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDES 58
M+SG +FD AF+GGGF SQ +T+ D S + S +R L+P+TVKQ+SE S S DE
Sbjct: 18 MFSGSQFDATTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQSGDEK 77
Query: 59 SA-SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK 117
S I+G D+N +T+VG++ + ++ F++DDGTGRI+C RW +E + E+ +
Sbjct: 78 SNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFDTKEMEAVMN 137
Query: 118 GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT-RLRGGSSNQPQ 176
MYVRVYGHLK+FQ + L A+S+RP+ +F+EI HF++CI+ L + ++ G +S P
Sbjct: 138 DMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEGITSANPS 197
Query: 177 MTNS---------NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVI 227
+S N + N + + H S D K ID++V+D+L + ++ G+H + +
Sbjct: 198 SGSSLETPVKSAPNRSQASNPVCAQH-SVDGLKGIDKLVMDYLEQHSDRSDGRGIHVDEL 256
Query: 228 SQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
S++L LP++K+ +L++L ++ +YS ID+ HYK A
Sbjct: 257 SRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYKKA 292
>gi|225429793|ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
gi|296081770|emb|CBI20775.3| unnamed protein product [Vitis vinifera]
Length = 268
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 155/247 (62%), Gaps = 8/247 (3%)
Query: 27 DPSSSFSKNRNVRTLLPMTVKQLSELS--SNDESSASIDGADVNTITVVGIVCDMQDKEP 84
D S +K+R + L+P+TVKQ+SE S +D+S+ IDG DV IT+VG+V D ++
Sbjct: 22 DSGVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQIDGVDVTNITLVGMVFDKSERVT 81
Query: 85 QFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
F +DDGTGRIEC RW +E + E+ IS G+YVR+ GHL++ R L A+S+RP+
Sbjct: 82 DVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVRLNGHLRSSGGNRQLVAFSVRPV 141
Query: 145 IDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKE---YNAISS--NHYSFDEG 199
+F+EI HF+E I++ L N++ R S Q +++ E Y SS + S D
Sbjct: 142 TNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQPLSASVKTESTGYQTPSSQLSAQSVDGV 201
Query: 200 KSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
K +DQMVLD+L++P G+HR+ +SQQL + +K+ME++ +L E L+YS IDEFH
Sbjct: 202 KGLDQMVLDYLQQPSNYDREKGIHRDELSQQLKISTEKIMESIRTLEEEGLIYSTIDEFH 261
Query: 259 YKSAVNA 265
YKS +
Sbjct: 262 YKSTTSG 268
>gi|388503518|gb|AFK39825.1| unknown [Lotus japonicus]
Length = 274
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 171/268 (63%), Gaps = 10/268 (3%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS--SNDESSA 60
S FD +AF+GGGFM + ++ D S + K+R+ + L+P+TV+Q+SE S +D+S+
Sbjct: 5 STNFDANSAFSGGGFMTTDSSHHSDSSPAPLKSRDTQGLVPVTVRQISEASHSGDDKSNF 64
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
I+G + +T+VG+V + +K + F++DDGTGRI+C RW +E + E++QI GMY
Sbjct: 65 VINGVGLTNVTLVGMVFEKVEKNTEVNFVLDDGTGRIKCRRWVNETYDTKEMDQIQDGMY 124
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS 180
VR+YGHLK+FQ R L A+S+RP+ +F+EI HF++CI+ LY+ G + P ++
Sbjct: 125 VRLYGHLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLYSKVKVEGITGNPPSSDL 184
Query: 181 NHLKEYN----AISSN---HYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNL 233
+ + N A SSN + D+ K D++V D+L++ ++ +G+H + +S QL L
Sbjct: 185 SLIAARNAPNQAASSNPLYAHGVDQLKGCDKLVFDYLQQHSDTSDESGIHVDELSLQLRL 244
Query: 234 PMDKLMEALESLNENSLVYS-IDEFHYK 260
P+DK+ +LE L + VYS IDE H+K
Sbjct: 245 PLDKIRSSLEVLKQEGYVYSTIDEDHHK 272
>gi|255634690|gb|ACU17707.1| unknown [Glycine max]
Length = 292
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 173/276 (62%), Gaps = 15/276 (5%)
Query: 1 MYSG-EFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDES 58
M+SG +FD AF+GGGF SQ +T+ D S + S +R L+P+TVKQ+SE S S DE
Sbjct: 18 MFSGSQFDTTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQSGDEK 77
Query: 59 SA-SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK 117
S I+G D+N +T+VG++ + ++ F++DDGTGRI+C RW +E + E+ +
Sbjct: 78 SNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFDTKEMEAVMN 137
Query: 118 GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT-RLRGGSSNQPQ 176
MYVRVYGHLK+FQ + L A+S+RP+ +F+EI HF++CI+ L + ++ G +S P
Sbjct: 138 DMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEGITSANPS 197
Query: 177 MTNS---------NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVI 227
+S N + N + + S D K ID++V+D+L + ++ G+H + +
Sbjct: 198 SGSSLETPVKSAPNRSQASNPVCAQR-SVDGLKGIDKLVMDYLEQHSDRSDGRGIHVDEL 256
Query: 228 SQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
S++L LP++K+ +L++L ++ +YS ID+ HYK A
Sbjct: 257 SRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYKKA 292
>gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum]
Length = 273
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 174/273 (63%), Gaps = 16/273 (5%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSA- 60
S +FD + AF+GGGF SQ + + S + +K+R+ + L+P+TVKQ+SE S S DE S
Sbjct: 4 SSQFDSSNAFSGGGFTSSQ---LNESSPAPTKSRDSQGLVPVTVKQISEASQSGDEKSNF 60
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
+I+G D+ +T+VG+V + ++ F++DDGTGRI+C RW +E + E+ ++S MY
Sbjct: 61 AINGVDLTNVTLVGMVYEKTERNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSNDMY 120
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY-NTRLRGGSSNQPQMTN 179
VRVYG+LK+FQ + L A+S+RP+ +F+EI HF++CI+ L +L G S P +
Sbjct: 121 VRVYGNLKSFQGVKQLGAFSVRPVTNFDEIPFHFIDCIHSHLLAKVKLEGTPSTYPPTNS 180
Query: 180 SNHLKEYNAISSN---------HYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQ 230
S + +A++ + YS D + D++V+D+L++ + + G+H ++++
Sbjct: 181 SINTPVKSALNGSQAPSNPGYTQYSTDGLEDCDKLVIDYLQQHSSMLDERGIHVEELARE 240
Query: 231 LNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
L LP+D++ ++++L ++ LVYS ID+ HYK A
Sbjct: 241 LKLPLDRIRLSVKALEDDGLVYSTIDDSHYKQA 273
>gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 157/260 (60%), Gaps = 15/260 (5%)
Query: 18 MPSQATTVPDPS-SSFSKNRNVRTLLPMTVKQLSELS---SNDESSASIDGADVNTITVV 73
MPSQAT V + SS K+ LLP+TVKQ+S+ + S++ S+ +IDG DVN +T+V
Sbjct: 20 MPSQATQVNEGGFSSVRKSGTATGLLPLTVKQISQATQKPSDENSNFTIDGVDVNNVTLV 79
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
G+V + +++ F +DDGTGR+E RW ++ ME E+ + G YVRV+GHL++FQ+K
Sbjct: 80 GMVFNKEERVTDVSFYLDDGTGRMEVKRWVNDAMESAEMADVQNGSYVRVHGHLRSFQNK 139
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQ---------PQMTNSNHLK 184
+ +NA+S+RP+ DFNE+T H +ECI+V LYN +++GG++ P SN
Sbjct: 140 KLVNAFSVRPVTDFNEVTFHSLECIFVHLYNMKVQGGATQPNSASPVAKGPPTPFSNTPS 199
Query: 185 EYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALE 243
+S S K +++MV P LA +GVH + + ++L+ ++ME++
Sbjct: 200 HNQFMSPGPVSVGGAKDLNRMVQSIFEEPANLAIEHGVHVDDVVRRLHGFTKKQIMESIA 259
Query: 244 SL-NENSLVYSIDEFHYKSA 262
L NE + +IDE HYKS
Sbjct: 260 FLINEGYIYSTIDEDHYKST 279
>gi|357150333|ref|XP_003575423.1| PREDICTED: replication factor A protein 2-like [Brachypodium
distachyon]
Length = 297
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 155/262 (59%), Gaps = 3/262 (1%)
Query: 7 DGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS--SNDESSASIDG 64
+ + F+GGGFMPSQAT P+ SSSF + RN +TLLP+TVKQL + ++D SS +++G
Sbjct: 36 NSSTLFSGGGFMPSQATNTPEGSSSFPRTRNAQTLLPVTVKQLMDACQINDDRSSFAVNG 95
Query: 65 ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVY 124
+++T+ +VG + + ++ F++DD TGRI+ +RW +E + NE+N++ G YV V
Sbjct: 96 TELSTVRLVGRMLNKTERVTDVSFILDDCTGRIDVNRWENETSDTNEMNEVKNGDYVIVN 155
Query: 125 GHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLK 184
G LK FQ KR +NAYS+R + ++N+IT HF+ CIYV L ++ + + + N +
Sbjct: 156 GCLKGFQGKRHVNAYSVRLVTNYNDITHHFLYCIYVHLDLSKSKRQLNAKTGTLNQAPVP 215
Query: 185 EYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALES 244
A +S+ G + ++V+ P + +GV ++ +L L + ++
Sbjct: 216 NNQAPTSSASGNSTGTELSKLVMSVFHDPVLINVEHGVSVQQVADRLKLSEELARSTVQE 275
Query: 245 LNENSLVYS-IDEFHYKSAVNA 265
L + +YS ID+ HYKS +N
Sbjct: 276 LVDLGNLYSTIDDNHYKSTLNG 297
>gi|195628020|gb|ACG35840.1| replication factor A [Zea mays]
gi|223973475|gb|ACN30925.1| unknown [Zea mays]
gi|413937901|gb|AFW72452.1| Replication factor A [Zea mays]
Length = 272
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 28/265 (10%)
Query: 12 FAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDESSASIDGADVNT 69
F GGGFMPSQ+T VP+ +S SK R+ +TLLP+TVKQ + +S D S+ +I+G +V+T
Sbjct: 25 FGGGGFMPSQSTVVPE-NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVST 83
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
I +VG + ++ +F +DDGTG+I+ +RW +E + E+ + YV V G LK
Sbjct: 84 IRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKG 143
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR--------GGSSNQPQMTNSN 181
FQ KR + AY++R + +FNEIT HF+ CI V + T L+ GG ++ P N
Sbjct: 144 FQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELTGLKIYSSAATYGGVAHAPSQPNPV 203
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+G I +VL P + +G+H + +L LP D + A
Sbjct: 204 ----------------DGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAA 247
Query: 242 LESLNENSLVY-SIDEFHYKSAVNA 265
++ + +Y +ID+FHYKS N
Sbjct: 248 IQGHVDVGNIYNTIDDFHYKSVRNG 272
>gi|115447461|ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|49388178|dbj|BAD25304.1| putative replication protein A2 [Oryza sativa Japonica Group]
gi|113537041|dbj|BAF09424.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|215707148|dbj|BAG93608.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 162/277 (58%), Gaps = 20/277 (7%)
Query: 9 AAAFAGGGFMPSQATTVPDPSSS----FSKNRNVRTLLPMTVKQLSELS--SNDESSASI 62
++ F GGGFMPSQAT + +S F K+RN + LLP+TVKQ+ + S ++D+S+ ++
Sbjct: 22 SSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFAV 81
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
+G +V+T+ +VG + + D+ F +DDGTGR+ +RW ++ + E+ I G YV
Sbjct: 82 NGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDYVI 141
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG--------GSSNQ 174
V G LK FQ KR + AYS+R I +FN++T HF+ C++V L TR + G+ NQ
Sbjct: 142 VNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGTPNQ 201
Query: 175 --PQMT---NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQ 229
P+ + N + L + S + G ++ +VL+ P + +++GV + +S+
Sbjct: 202 TMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGVDYVSR 261
Query: 230 QLNLPMDKLME-ALESLNENSLVYSIDEFHYKSAVNA 265
+LNLP + + + ++ ++ L +ID+ HYKS +N
Sbjct: 262 RLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG 298
>gi|413937902|gb|AFW72453.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 273
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 145/266 (54%), Gaps = 29/266 (10%)
Query: 12 FAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDESSASIDGADVNT 69
F GGGFMPSQ+T VP+ +S SK R+ +TLLP+TVKQ + +S D S+ +I+G +V+T
Sbjct: 25 FGGGGFMPSQSTVVPE-NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVST 83
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
I +VG + ++ +F +DDGTG+I+ +RW +E + E+ + YV V G LK
Sbjct: 84 IRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKG 143
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR---------GGSSNQPQMTNS 180
FQ KR + AY++R + +FNEIT HF+ CI V + T L+ GG ++ P N
Sbjct: 144 FQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELTGLKQIYSSAATYGGVAHAPSQPNP 203
Query: 181 NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLME 240
+G I +VL P + +G+H + +L LP D +
Sbjct: 204 V----------------DGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSA 247
Query: 241 ALESLNENSLVY-SIDEFHYKSAVNA 265
A++ + +Y +ID+FHYKS N
Sbjct: 248 AIQGHVDVGNIYNTIDDFHYKSVRNG 273
>gi|218191227|gb|EEC73654.1| hypothetical protein OsI_08182 [Oryza sativa Indica Group]
Length = 300
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 162/281 (57%), Gaps = 24/281 (8%)
Query: 9 AAAFAGGGFMPSQATTVPDPSSS----FSKNRNVRTLLPMTVKQLSELS--SNDESSASI 62
++ F GGGFMPSQAT + +S F K+RN + LLP+TVKQ+ + S ++D+S+ ++
Sbjct: 20 SSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFAV 79
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW----AHEQMEFNEVNQISKG 118
+G +V+T+ +VG + + D+ F +DDGTGR+ +RW ++ + E+ I G
Sbjct: 80 NGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWWDAMENDSTDTKEMADIQNG 139
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG--------G 170
YV V G LK FQ KR + AYS+R I +FN++T HF+ C++V L TR + G
Sbjct: 140 DYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATG 199
Query: 171 SSNQ--PQMT---NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRN 225
+ NQ P+ + N + L + S + G ++ +VL+ P + +++GV +
Sbjct: 200 TPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGVD 259
Query: 226 VISQQLNLPMDKLME-ALESLNENSLVYSIDEFHYKSAVNA 265
+S++LNLP + + + ++ ++ L +ID+ HYKS +N
Sbjct: 260 YVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG 300
>gi|356564842|ref|XP_003550656.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 178
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 53 SSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEV 112
SS+D + +DG DV +T+VG V + + F++DDGTGRIECS+W HE ++ NE
Sbjct: 3 SSDDRINLIVDGVDVTNVTLVGRVSNKTGRITDVTFVLDDGTGRIECSKWLHEAVDTNEA 62
Query: 113 NQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS 172
I GMY R++G LK FQ KR+L +S RP+ DFNEI SHF +CIYV LYN+RLR
Sbjct: 63 EAILDGMYARLHGQLKHFQRKRTLTVFSFRPVTDFNEIASHFSDCIYVHLYNSRLRSSVP 122
Query: 173 NQ-------PQMT-NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRP 213
NQ P + + + N S H + +G +++ MVLDFL P
Sbjct: 123 NQQHSSPIPPTIVYQAQAVPPTNQFSDQHINGQKGVTVEAMVLDFLHHP 171
>gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
gi|241934661|gb|EES07806.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
Length = 278
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 150/269 (55%), Gaps = 21/269 (7%)
Query: 17 FMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQL--SELSSNDESSAS--IDGADVNT 69
F PSQ T + S++ SK R + +P+TVKQ+ ++ S E A +DG ++
Sbjct: 9 FSPSQFTASQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFVVDGVEMAN 68
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
I +VG+V ++ F +DDGTGR++ RW ++ + +E + GMYV V G LK
Sbjct: 69 IRLVGMVNGKVERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGMYVAVIGSLKG 128
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS----SNQPQMTNSNHLKE 185
Q+++ A+S+RPI DFNE+T HF++C+ + + NT+L+ GS S+ ++ SN E
Sbjct: 129 LQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTKLKAGSPARTSSSMGVSVSNGFSE 188
Query: 186 YN---AISSNHYSFDEGKS-----IDQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPMD 236
+ ++ SN G S +++ VL F P L + +GVH + + +Q LP D
Sbjct: 189 SSTPTSLKSNPAPLTGGGSGSDTDLNKQVLHFFSEPANLESEHGVHVDEVYKQFKQLPKD 248
Query: 237 KLMEALE-SLNENSLVYSIDEFHYKSAVN 264
K+ EA+ ++ L +ID+FH+KSA+
Sbjct: 249 KIKEAIAFHVDAGHLYSTIDDFHFKSALT 277
>gi|302799926|ref|XP_002981721.1| hypothetical protein SELMODRAFT_421246 [Selaginella moellendorffii]
gi|300150553|gb|EFJ17203.1| hypothetical protein SELMODRAFT_421246 [Selaginella moellendorffii]
Length = 279
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 156/276 (56%), Gaps = 26/276 (9%)
Query: 7 DGAAAFAGGGFMPSQ----ATTVPDPSSSFSKNRNVRTLLPMTVKQLSE-LSSNDESSAS 61
+ A F GGGFMPSQ AT DPS S + L P+TVKQ+S + S+ + +
Sbjct: 5 NAAMDFGGGGFMPSQPSGFATGGGDPSVKKSGAPS-SGLFPLTVKQMSRAIQSSTDDNLI 63
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--AHEQMEFNEVNQISKGM 119
+DG ++ +T+VG++ +++ F++DDGTGR+E RW + + E +++ I G
Sbjct: 64 VDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHSIQHGQ 123
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG-----GSSNQ 174
YVR++GHL+ FQ+KR++ A++++PI DFNEIT HF++CI+ YNT+ +G G ++
Sbjct: 124 YVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGPASP 183
Query: 175 PQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR-------PEFLANNNGVHRNVI 227
P ++N Y+ SN Y+ + + + RR P + G+H + I
Sbjct: 184 PTFNHTN----YSNPVSNPYATPAAPANSNGMSECQRRVQAVFEEPSVKESEQGLHVDEI 239
Query: 228 SQQL-NLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
++++ ++ +A+E L VYS +D+ H+KS
Sbjct: 240 ARRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFKS 275
>gi|302768771|ref|XP_002967805.1| hypothetical protein SELMODRAFT_440021 [Selaginella moellendorffii]
gi|300164543|gb|EFJ31152.1| hypothetical protein SELMODRAFT_440021 [Selaginella moellendorffii]
Length = 279
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 155/276 (56%), Gaps = 26/276 (9%)
Query: 7 DGAAAFAGGGFMPSQ----ATTVPDPSSSFSKNRNVRTLLPMTVKQLSE-LSSNDESSAS 61
+ A F GGGFMPSQ AT DPS S + L P+TVKQ+S + S + +
Sbjct: 5 NAAMDFGGGGFMPSQPSGFATGGGDPSVKKSGAPS-SGLFPLTVKQMSRAIQSATDDNLI 63
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--AHEQMEFNEVNQISKGM 119
+DG ++ +T+VG++ +++ F++DDGTGR+E RW + + E +++ I G
Sbjct: 64 VDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHSIQHGQ 123
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG-----GSSNQ 174
YVR++GHL+ FQ+KR++ A++++PI DFNEIT HF++CI+ YNT+ +G G ++
Sbjct: 124 YVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGPASP 183
Query: 175 PQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR-------PEFLANNNGVHRNVI 227
P ++N Y+ SN Y+ + + + RR P + G+H + I
Sbjct: 184 PTFNHTN----YSNPVSNPYATPAAPANSNGMSECQRRVQAVFEEPSVKESEQGLHVDEI 239
Query: 228 SQQL-NLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
++++ ++ +A+E L VYS +D+ H+KS
Sbjct: 240 ARRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFKS 275
>gi|357138267|ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subunit-like [Brachypodium
distachyon]
Length = 278
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 151/283 (53%), Gaps = 28/283 (9%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLS--ELSSNDES 58
M+S + D AF+ F SQ S++ SK R + P+TVKQ++ +LS + +
Sbjct: 2 MFSSQLD---AFSPSQFTSSQNAAAD--STTPSKFRGASSTTPLTVKQIADAQLSGSGDK 56
Query: 59 SAS--IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQIS 116
A +DG ++ I +VG+V ++ F +DDGTGR++ RW ++ + E I
Sbjct: 57 GAPFVVDGVEIANIRLVGMVNGKAERATDVSFTLDDGTGRLDFIRWVNDATDSAETAAIQ 116
Query: 117 KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQ 176
GMYV V G LK QDK+ A+S+RPI D+NE+T HF++C+ + + NT+ + GS P
Sbjct: 117 NGMYVAVIGTLKGLQDKKHATAFSVRPITDYNEVTLHFIQCVRIHIENTKSKVGS---PA 173
Query: 177 MTN-------SNHLKEYNAISSNH-----YSFDEGKSIDQM---VLDFLRRPEFLANNNG 221
TN SN L E +S S +G D + VL L P + +G
Sbjct: 174 KTNSAIGTSLSNSLSEATTPTSLKSQAPVTSGTDGSGTDDLHTQVLKILCEPANAESEHG 233
Query: 222 VHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAV 263
VH + I+++ LP +K+ EA+ + +YS ID+FH+KSA+
Sbjct: 234 VHIDEITKRFKLPAEKIKEAIYYNVDIGHIYSTIDDFHFKSAL 276
>gi|13516746|dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa Japonica Group]
Length = 279
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 147/270 (54%), Gaps = 21/270 (7%)
Query: 16 GFMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQLSE-----LSSNDESSASIDGADV 67
F PSQ T+ + S++ SK+R + +P+TVKQ+SE ++ + +DG +
Sbjct: 9 AFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVET 68
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+ +VG+V ++ F+IDDGTGR++ RW ++ + E + GMYV V G L
Sbjct: 69 ANVRLVGLVSGKTERNTDVSFMIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSL 128
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP----QMTNSNHL 183
K Q+++ A+++RP+ D+NE+T HF++C+ + L NT+ + GS + ++SN
Sbjct: 129 KGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGF 188
Query: 184 KEY---NAISSNH---YSFDEGKSID--QMVLDFLRRPEFLANNNGVHRNVISQQLNLPM 235
E ++ SN S G D VL+ R P + + +GVH + I ++L LP
Sbjct: 189 SEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRLRLPE 248
Query: 236 DKLMEALESLNENSLVYS-IDEFHYKSAVN 264
K+ A++ L + +YS IDE HYKSA N
Sbjct: 249 AKIKVAIDYLADIGHIYSTIDESHYKSAFN 278
>gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 277
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 25/269 (9%)
Query: 16 GFMPSQATTVPDPSSSFSKN--RNVRTLLPMTVKQLS--ELSSNDESSAS--IDGADVNT 69
F PSQ T + ++ + N R +P+TVKQ++ +L+ E +DG +
Sbjct: 9 AFSPSQFTASQNAAADSTPNKFRGASGTMPLTVKQIADAQLAGTGEKGGPFVVDGVETAN 68
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
+ +VG+V ++ F +DDGTGRI+ RW ++ + E I GMYV V G LK
Sbjct: 69 VRLVGMVSGKVERNTDVSFTLDDGTGRIDFIRWVNDAADSAETAAIQNGMYVAVIGSLKG 128
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN-------SNH 182
QDK+ A+++RPI D+NE+T HF++C+ + NT+ + GS P TN SN
Sbjct: 129 VQDKKRATAFAVRPITDYNEVTLHFIQCVRMHAENTKSKVGS---PTHTNSSMGTPFSNR 185
Query: 183 LKEYN---AISSN---HYSFDEGKSID--QMVLDFLRRPEFLANNNGVHRNVISQQLNLP 234
L E ++ SN S G D VL+ R P + +++GVH + I+++ LP
Sbjct: 186 LNEAATPPSVKSNPAPAASGTNGSETDFYTQVLNVFREPANMESDHGVHMDDIAKRFRLP 245
Query: 235 MDKLMEALESLNENSLVYS-IDEFHYKSA 262
K+ EA++ + +YS ID+FHYKSA
Sbjct: 246 ALKIKEAIDYHVDVGHIYSTIDDFHYKSA 274
>gi|168062552|ref|XP_001783243.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665247|gb|EDQ51938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 150/279 (53%), Gaps = 21/279 (7%)
Query: 3 SGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRT-----LLPMTVKQLSELSSNDE 57
SG A+ FAGGGFMPSQA T + SSS S L P+TVK +S+ S
Sbjct: 5 SGGGGDASLFAGGGFMPSQAATGNEFSSSVSGASRRSGGQDGGLQPLTVKMISQASQKPG 64
Query: 58 SSA-SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--AHEQMEFNEVNQ 114
A +DG ++N +T+VG+V D ++ F++DD TGRIE RW + E+ E+
Sbjct: 65 DDAFYVDGLEINNVTLVGMVHDKDERNIDTSFMLDDTTGRIEVKRWIDGQDSYEYFEMQS 124
Query: 115 ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS-- 172
+ MYVRV+GHL+ FQ+K ++ A+S+RPI DFNE+T HF+E I+V L TR +GG S
Sbjct: 125 VQNFMYVRVHGHLRTFQNKLNVVAFSVRPITDFNEVTFHFLEVIHVHLSRTR-KGGVSAV 183
Query: 173 NQPQMTNSNHLKE---YNAI-----SSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHR 224
P + N+ + Y + SS + + + V P L G+H
Sbjct: 184 ATPALGNTMATPQNGMYTPVKTPIASSAIPAGGAKEECQRRVHSIYEEPASLQVEQGLHV 243
Query: 225 N-VISQQLNLPMDKLMEALESL-NENSLVYSIDEFHYKS 261
+ V+ + + ++ EA++ L NE + +ID+ H+KS
Sbjct: 244 DQVVQRMVGFTRAQVREAIDFLVNEGYIYSTIDDDHHKS 282
>gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
gi|9801268|emb|CAC03572.1| replication protein A2 [Oryza sativa]
gi|48716324|dbj|BAD22936.1| replication protein A2 [Oryza sativa Japonica Group]
gi|113538135|dbj|BAF10518.1| Os02g0829100 [Oryza sativa Japonica Group]
gi|215737037|dbj|BAG95966.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 145/270 (53%), Gaps = 21/270 (7%)
Query: 16 GFMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQLSE-----LSSNDESSASIDGADV 67
F PSQ T+ + S++ SK+R + +P+TVKQ+SE ++ + +DG +
Sbjct: 9 AFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVET 68
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+ +VG+V ++ F IDDGTGR++ RW ++ + E + GMYV V G L
Sbjct: 69 ANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSL 128
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP----QMTNSNHL 183
K Q+++ A+++RP+ D+NE+T HF++C+ + L NT+ + GS + ++SN
Sbjct: 129 KGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGF 188
Query: 184 KEY---NAISSNH---YSFDEGKSID--QMVLDFLRRPEFLANNNGVHRNVISQQLNLPM 235
E ++ SN S G D VL+ R P + + +GVH + I ++ LP
Sbjct: 189 SEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPE 248
Query: 236 DKLMEALESLNENSLVYS-IDEFHYKSAVN 264
K+ A++ L + +YS IDE HYKSA N
Sbjct: 249 AKIKVAIDYLADIGHIYSTIDESHYKSAFN 278
>gi|222623970|gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa Japonica Group]
Length = 278
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 145/270 (53%), Gaps = 21/270 (7%)
Query: 16 GFMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQLSE-----LSSNDESSASIDGADV 67
F PSQ T+ + S++ SK+R + +P+TVKQ+SE ++ + +DG +
Sbjct: 8 AFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGVET 67
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+ +VG+V ++ F IDDGTGR++ RW ++ + E + GMYV V G L
Sbjct: 68 ANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSL 127
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP----QMTNSNHL 183
K Q+++ A+++RP+ D+NE+T HF++C+ + L NT+ + GS + ++SN
Sbjct: 128 KGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSNGF 187
Query: 184 KEY---NAISSNH---YSFDEGKSID--QMVLDFLRRPEFLANNNGVHRNVISQQLNLPM 235
E ++ SN S G D VL+ R P + + +GVH + I ++ LP
Sbjct: 188 SEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPE 247
Query: 236 DKLMEALESLNENSLVYS-IDEFHYKSAVN 264
K+ A++ L + +YS IDE HYKSA N
Sbjct: 248 AKIKVAIDYLADIGHIYSTIDESHYKSAFN 277
>gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica Group]
Length = 279
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 145/270 (53%), Gaps = 21/270 (7%)
Query: 16 GFMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQLSEL---SSNDESSAS--IDGADV 67
F PSQ T+ + S++ SK+R + +P+TVKQ+SE + E A +DG +
Sbjct: 9 AFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGTTGEKGAPFVVDGVET 68
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+ +VG+V ++ F IDDGTGR++ RW ++ + E + GMYV V G L
Sbjct: 69 ANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIGSL 128
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR--LRGGSSNQPQM--TNSNHL 183
K Q+++ A+++RP+ D+NE+T HF++C+ + L NT+ + G + M ++SN
Sbjct: 129 KGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGGPAKTYSAMGSSSSNGF 188
Query: 184 KEY---NAISSNH---YSFDEGKSID--QMVLDFLRRPEFLANNNGVHRNVISQQLNLPM 235
E ++ SN S G D VL+ R P + + +GVH + I ++ LP
Sbjct: 189 SEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPE 248
Query: 236 DKLMEALESLNENSLVYS-IDEFHYKSAVN 264
K+ A++ L + +YS IDE HYKSA N
Sbjct: 249 AKIKVAIDYLADIGHIYSTIDESHYKSAFN 278
>gi|413937900|gb|AFW72451.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 215
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 110/178 (61%), Gaps = 11/178 (6%)
Query: 12 FAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDESSASIDGADVNT 69
F GGGFMPSQ+T VP+ +S SK R+ +TLLP+TVKQ + +S D S+ +I+G +V+T
Sbjct: 25 FGGGGFMPSQSTVVPE-NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVST 83
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
I +VG + ++ +F +DDGTG+I+ +RW +E + E+ + YV V G LK
Sbjct: 84 IRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKG 143
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR--------GGSSNQPQMTN 179
FQ KR + AY++R + +FNEIT HF+ CI V + T L+ GG ++ P N
Sbjct: 144 FQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELTGLKIYSSAATYGGVAHAPSQPN 201
>gi|194693140|gb|ACF80654.1| unknown [Zea mays]
gi|413939586|gb|AFW74137.1| replication protein A subunit [Zea mays]
Length = 273
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 145/267 (54%), Gaps = 25/267 (9%)
Query: 17 FMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQL--SELSSNDESSAS--IDGADVNT 69
F PSQ T+ + S++ SK R + +P+TVKQ+ ++ S E A ++G ++
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
I +VG+V ++ F +DDGTGR++ RW ++ + E I GMY+ V G LK
Sbjct: 69 IRLVGMVNAKVERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLKG 128
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN-------SNH 182
Q+++ A+S+RPI DFNE+T HF++C+ + + NT L+ GS P N SN
Sbjct: 129 LQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKAGS---PARINSSMGVSFSNG 185
Query: 183 LKEYN---AISSNHYSFDEGKS---IDQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPM 235
E + ++ S+ G S + VL+F P L + +GVH + + ++ LP
Sbjct: 186 FSESSTPTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPK 245
Query: 236 DKLMEALE-SLNENSLVYSIDEFHYKS 261
++ +A++ +++ L +IDEFHYK+
Sbjct: 246 KQITDAIDYNMDSGRLYSTIDEFHYKA 272
>gi|195619742|gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays]
Length = 273
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 146/264 (55%), Gaps = 19/264 (7%)
Query: 17 FMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQL--SELSSNDESSAS--IDGADVNT 69
F PSQ T+ + S++ SK R + +P+TVKQ+ ++ S E A ++G ++
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
I +VG+V ++ F +DDGTGR++ RW ++ + E I GMY+ V G LK
Sbjct: 69 IRLVGMVNAKVERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLKG 128
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS----SNQPQMTNSNHLKE 185
Q+++ A+S+RPI DFNE+T HF++C+ + + N L+ GS S+ ++ SN E
Sbjct: 129 LQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENIELKAGSPARISSSMGVSFSNGFSE 188
Query: 186 YN---AISSNHYSFDEGKS---IDQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKL 238
+ ++ S+ G S + VL+F P L + +GVH + + ++ LP ++
Sbjct: 189 SSTPTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQI 248
Query: 239 MEALE-SLNENSLVYSIDEFHYKS 261
+A++ +++ L +IDEFHYK+
Sbjct: 249 TDAIDYNMDSGRLYSTIDEFHYKA 272
>gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit [Camellia sinensis]
Length = 222
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 109/161 (67%), Gaps = 4/161 (2%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSNDESSASIDGADVNTITVVGIVC 77
SQ+T D SS +K+RN ++P+TVKQ+SE S +++S+ +DG DV +T++G+V
Sbjct: 14 SQSTQATDIGSSPAKSRNAYGVVPITVKQISESAHSGDEKSNYVVDGVDVVNVTLIGMVS 73
Query: 78 DMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLN 137
++ F +DDGTGRI+C+RW +E + E+ I G+YVRV G +K+ Q +R L
Sbjct: 74 KKTERVTDVAFTLDDGTGRIDCNRWVNEAFDSKEMENIQDGIYVRVNGLIKSLQGRRQLI 133
Query: 138 AYSLRPIIDFNEITSHFVECIYVQLYN--TRLRGGSSNQPQ 176
A+S+RP+ +F+EI+ HF+ECI+ L N T+L+G ++ QPQ
Sbjct: 134 AFSVRPVTNFDEISFHFIECIHFHLQNSKTKLQGNTTTQPQ 174
>gi|222623299|gb|EEE57431.1| hypothetical protein OsJ_07632 [Oryza sativa Japonica Group]
Length = 263
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 31/265 (11%)
Query: 9 AAAFAGGGFMPSQATTVPDPSSS----FSKNRNVRTLLPMTVKQLSELS--SNDESSASI 62
++ F GGGFMPSQAT + +S F K+RN + LLP+TVKQ+ + S ++D+S+ ++
Sbjct: 22 SSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFAV 81
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
+G +V+T+ +VG + + D+ F +DDGTGR+ +A G YV
Sbjct: 82 NGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVCFVLFARN------------GDYVI 129
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
V G LK FQ KR + AYS+R I +FN++T HF+ C++V L TR + + N
Sbjct: 130 VNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGTPNQ 189
Query: 183 LKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA- 241
++++ N S P+ N G N+I LN+ D +
Sbjct: 190 TMPRDSMAYNQSPLTNQAST-------FSAPQ----NTGTGTNMIDLVLNVFHDPAVMKI 238
Query: 242 -LESLNENSLVYSIDEFHYKSAVNA 265
++ ++ L +ID+ HYKS +N
Sbjct: 239 IIDQVDLGHLYATIDDHHYKSTMNG 263
>gi|219885111|gb|ACL52930.1| unknown [Zea mays]
gi|413943271|gb|AFW75920.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 337
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 81/334 (24%)
Query: 9 AAAFAGGGFMPSQ-ATTVPD------PSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA- 60
A+ FAG +PSQ AT PD PS + S++ TV+ ++ + +++
Sbjct: 2 ASYFAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATGD 61
Query: 61 -----SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
IDG D + ++G V + + E F +DDGTG+I +RW E ++ EV +
Sbjct: 62 GDLVIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFV 121
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR------- 168
G+Y++V L FQ K+ A ++RP+ +FNE+ HF+ECIY+ L N R +
Sbjct: 122 QNGIYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVRQKMQGQFPR 181
Query: 169 ------------------------------GGSSNQ-----PQMTNSNHLKEYNAISSNH 193
GG+ P++ + L + H
Sbjct: 182 SIQANVSTYEMQAQVAHSIQTKSPAYMPFSGGAREHQVDFAPEVNHGRFLSSVQTNTPTH 241
Query: 194 YSFDEGKSIDQ-------------------------MVLDFLRRPEFLANNNGVHRNVIS 228
F G Q MVL+ ++RP+ LA NGVH + ++
Sbjct: 242 VPFSGGAREQQVHFTPQPNQFSAYPGTGGHQHDLQSMVLEVMQRPDILALENGVHVDEVA 301
Query: 229 QQLNLPMDKLMEALESL-NENSLVYSIDEFHYKS 261
++L +P +++ + L N L +ID++H+KS
Sbjct: 302 RRLGMPSAQILATAQRLVNLACLCSTIDDYHFKS 335
>gi|303279042|ref|XP_003058814.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459974|gb|EEH57269.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 275
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 10/172 (5%)
Query: 1 MYSGEFDGAAA-FAG-GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSEL--SSND 56
MY G +DG+A+ FAG GGF Q +L+P+TVKQL E +SN
Sbjct: 1 MYGG-YDGSASQFAGQGGFTAGQTAAAGGADGGARSQGRAESLVPLTVKQLKESIDASNV 59
Query: 57 ESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ-- 114
+ + ++G +V+ +T++G + D ++ IDDGTG E W + + + NQ
Sbjct: 60 DDAFKVNGEEVHNLTLLGKIVKANDSSTSLMYTIDDGTGTCEVKIWV-DADDADGQNQNK 118
Query: 115 --ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYN 164
G YVRVYGHL+AFQ +R + A+++RP+ DFNEIT HF+E +Y +N
Sbjct: 119 AEWKVGAYVRVYGHLRAFQGQRGVIAFNMRPVTDFNEITYHFLEVVYCNSHN 170
>gi|413943272|gb|AFW75921.1| hypothetical protein ZEAMMB73_214336 [Zea mays]
Length = 320
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 80/311 (25%)
Query: 9 AAAFAGGGFMPSQ-ATTVPD------PSSSFSKNRNVRTLLPMTVKQLS------ELSSN 55
A+ FAG +PSQ AT PD PS + S++ TV+ ++ + + +
Sbjct: 2 ASYFAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATGD 61
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
+ IDG D + ++G V + + E F +DDGTG+I +RW E ++ EV +
Sbjct: 62 GDLVIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFV 121
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR------- 168
G+Y++V L FQ K+ A ++RP+ +FNE+ HF+ECIY+ L N R +
Sbjct: 122 QNGIYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVRQKMQGQFPR 181
Query: 169 ------------------------------GGSSNQ-----PQMTNSNHLKEYNAISSNH 193
GG+ P++ + L + H
Sbjct: 182 SIQANVSTYEMQAQVAHSIQTKSPAYMPFSGGAREHQVDFAPEVNHGRFLSSVQTNTPTH 241
Query: 194 YSFDEGKSIDQ-------------------------MVLDFLRRPEFLANNNGVHRNVIS 228
F G Q MVL+ ++RP+ LA NGVH + ++
Sbjct: 242 VPFSGGAREQQVHFTPQPNQFSAYPGTGGHQHDLQSMVLEVMQRPDILALENGVHVDEVA 301
Query: 229 QQLNLPMDKLM 239
++L +P +++
Sbjct: 302 RRLGMPSAQIL 312
>gi|238013468|gb|ACR37769.1| unknown [Zea mays]
gi|413939585|gb|AFW74136.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 307
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 147/301 (48%), Gaps = 59/301 (19%)
Query: 17 FMPSQATTVPDP---SSSFSKNRNVRTLLPMTVKQL--SELSSNDESSAS--IDGADVNT 69
F PSQ T+ + S++ SK R + +P+TVKQ+ ++ S E A ++G ++
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 70 ITV-----------------------------VGIVCDMQDKEPQFIFLIDDGTGR---I 97
+ + VG+V ++ F +DDGTGR I
Sbjct: 69 VPIILLFVLWSVDMQMFSALIHLPRFPFQIRLVGMVNAKVERTTDVTFTLDDGTGRLDFI 128
Query: 98 ECSRWAHEQMEF-NEVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
C+ + F +V+ +S+ GMY+ V G LK Q+++ A+S+RPI DFNE+T HF+
Sbjct: 129 RCTFSVGKSPCFCADVHWLSRNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFI 188
Query: 156 ECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYN----------AISSNHYSFDEGKS---I 202
+C+ + + NT L+ GS P NS+ ++ ++ S+ G S +
Sbjct: 189 QCVRMHIENTELKAGS---PARINSSMGVSFSNGFSESSTPTSLKSSPAPVTSGSSDTDL 245
Query: 203 DQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALE-SLNENSLVYSIDEFHYK 260
VL+F P L + +GVH + + ++ LP ++ +A++ +++ L +IDEFHYK
Sbjct: 246 HTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFHYK 305
Query: 261 S 261
+
Sbjct: 306 A 306
>gi|226505284|ref|NP_001152264.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|194697154|gb|ACF82661.1| unknown [Zea mays]
gi|195654425|gb|ACG46680.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|413934694|gb|AFW69245.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 336
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 13/174 (7%)
Query: 8 GAAAFAGGGFMPSQ-ATTVPDPSS----SFSKNRNVRT--LLPMTVKQLS------ELSS 54
A+ F G +PSQ AT PD S+ S +K+R+ R P TV+ ++ + +S
Sbjct: 4 AASYFTGPTILPSQRATAAPDNSAVATPSLAKSRDPRCSGCSPTTVRHIARSFAAADATS 63
Query: 55 NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ 114
+ SIDG D + ++G + + E F +DDGTG+I RW + ++ EV+
Sbjct: 64 GGDPVISIDGVDATNVWLLGRAVSVMNMEAGVSFTLDDGTGQIALMRWITDDIDAKEVSF 123
Query: 115 ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR 168
+ G+Y++V L FQ K+ A+S+RP+ +FNE+ HF+EC+YV L N R +
Sbjct: 124 VQNGLYLKVQVTLVGFQAKQHGFAHSIRPVTNFNELALHFIECMYVHLENVRPK 177
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 192 NHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLV 251
N ++ + + MVL+ +++P+ LA NGVH + ++++L +P ++M + L + + +
Sbjct: 262 NQFTGGQQHDLQSMVLEVMQQPDILALENGVHVDEVARRLGMPRAQIMAIAQRLVDLACL 321
Query: 252 YS-IDEFHYKSAVN 264
YS ID++H+KS +N
Sbjct: 322 YSTIDDYHFKSLLN 335
>gi|301110905|ref|XP_002904532.1| replication protein A 32 kDa subunit, putative [Phytophthora
infestans T30-4]
gi|262095849|gb|EEY53901.1| replication protein A 32 kDa subunit, putative [Phytophthora
infestans T30-4]
Length = 259
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 35/257 (13%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIF 88
S+ ++ +++LP+T+KQL L++ D+ + +DG +V+T+ +VG++ ++ + F
Sbjct: 10 STPTKRSGGAQSILPVTIKQLQSLNAGDDDAVRLDGQEVSTVRLVGLLTNLTPQSTSLRF 69
Query: 89 LIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFN 148
+DDG+G +C + + + +E + +G YVRV G L++FQ K SL+ +++ P+ D N
Sbjct: 70 QLDDGSGAFDCQYFVNADEDASE-GDLREGSYVRVVGKLRSFQGKASLSCFNVVPVQDMN 128
Query: 149 EITSHFVECIYVQLYNTR--LRGGSS-----------------NQPQMTNSNHLK---EY 186
E+T H +E IY YNT+ L G + NQP + +Y
Sbjct: 129 ELTHHLLEVIYAHCYNTKGPLNDGKADVTMTSFNTPTKGANQWNQPNAGATGGFGGGVDY 188
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMD--KLMEALES 244
+ SN +S ++ + +LD L ++ G+ + I LN M+ +L AL
Sbjct: 189 GMMDSN-FSPEQ-----KAILDVLGT---CTSDRGIKIDQIYADLNGQMNEQQLRSALNY 239
Query: 245 LNENSLVYS-IDEFHYK 260
L VYS IDE H+K
Sbjct: 240 LTSEGHVYSTIDEDHFK 256
>gi|121699890|ref|XP_001268210.1| possible replication factor-a protein [Aspergillus clavatus NRRL 1]
gi|119396352|gb|EAW06784.1| possible replication factor-a protein [Aspergillus clavatus NRRL 1]
Length = 303
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 22/246 (8%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
SS + N TL P+TVKQ + S E+S IDGADV+++ VVG V ++ +
Sbjct: 54 SSHNQGDNNNNTLRPVTVKQALDASQPYPEASFQIDGADVSSVCVVGQVRNISSQSTNVT 113
Query: 88 FLIDDGTGRIECSRWAHEQ----MEFNEVN-------QISKGMYVRVYGHLKAFQDKRSL 136
+ IDDGTG IE +W Q ME +E Q+ Y +V+G +K+F +K+ +
Sbjct: 114 YKIDDGTGEIEAKQWIDSQSSDTMETDESKVADTKKPQVELNGYAKVFGKIKSFGNKKYI 173
Query: 137 NAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSF 196
A+S+RP+ D NE+ H +E V L+ TR E A ++ +
Sbjct: 174 GAHSVRPVTDINEVHCHLLEAAAVHLFFTR----GPPGGGAAGGAAGDETGADATMGGAD 229
Query: 197 DEGKSIDQMVLDFLRRPEFL-----ANNNGVHRNVISQQLNLPMDKLMEALESLNENSLV 251
D G + RR L +N G+H +I+ +LNLPM + A E L ++
Sbjct: 230 DFGNRALPAMSPVARRVYSLLKTEPQSNEGLHAQLIAAKLNLPMPDVARAGEELLTAGVI 289
Query: 252 YS-IDE 256
+S +DE
Sbjct: 290 FSTVDE 295
>gi|170088392|ref|XP_001875419.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650619|gb|EDR14860.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 225
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 123/230 (53%), Gaps = 20/230 (8%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+ QL++ + ++ ++ +DG ++ +T+VG V +Q + +++IDDGTGRIE
Sbjct: 2 SLRPLTIAQLNKATQAHTDAEWQVDGMEIGQVTIVGHVSSIQAQTTNCVYVIDDGTGRIE 61
Query: 99 CSRWA--HEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
W+ ++ F +N++ + YVRV G LK F KR +N +RP D +E+ H +E
Sbjct: 62 ARHWSVFFPRLPFQSINEVREKTYVRVTGGLKTFGSKRYINTTHVRPSKDPHEVYFHILE 121
Query: 157 CIYVQLYNTR----LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR 212
I V L R RG S TN +A + YS ++Q + F+
Sbjct: 122 AITVTLTLERGPVSPRGADSTMANYTN------LSAPIGDEYS--HRPKLEQDICRFI-- 171
Query: 213 PEFLANNNGVHRNVISQQLNLPMD--KLMEALESLNENSLVY-SIDEFHY 259
E AN+ G+H I++ + D ++ +AL+ L ++ LV+ +ID+ H+
Sbjct: 172 AEQPANDAGIHVAAIARAVGGGGDAHRISDALDKLMDDGLVFTTIDDSHF 221
>gi|412987584|emb|CCO20419.1| predicted protein [Bathycoccus prasinos]
Length = 272
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 130/264 (49%), Gaps = 11/264 (4%)
Query: 7 DGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESS---ASID 63
DGA F GGG+ + + DPSS + K + ++ P+T+KQ+SE +++ + A +
Sbjct: 8 DGATQFQGGGYGTNTGASGGDPSS-YQKRQQEDSITPVTIKQISEATASSAEADEFALLT 66
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQME--FNEVNQISKGMYV 121
G + +T+VG + ++ + +DDGTG C + E+ NEV YV
Sbjct: 67 GKPIGLVTIVGKIVSKEETGAHKLLSVDDGTGACCCKEYPGEETAEGANEVT-FETNEYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
RV G LK++ D R + + R I DFNE+ HF++ +Y + +G S T +
Sbjct: 126 RVTGKLKSWNDARYIQVMNCRKITDFNEVAFHFLDAMYASSRFSNEKGSSVAAQATTATG 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEF-LANNNGVHRNVISQQLN--LPMDKL 238
A+ ++ + D G S+ + +L P A ++G+ + + + L MD +
Sbjct: 186 AAPAAYAMPTSGNNPDAGGSLQEQLLAIYNNPSGPAAGDSGIEISEMCKLLGGKYTMDAV 245
Query: 239 MEALESLNENSLVYS-IDEFHYKS 261
EA+E L+ VYS I + H++S
Sbjct: 246 REAVEMLSNEGHVYSTITDDHHRS 269
>gi|159483541|ref|XP_001699819.1| replication protein A 30 kDa subunit [Chlamydomonas reinhardtii]
gi|158281761|gb|EDP07515.1| replication protein A 30 kDa subunit [Chlamydomonas reinhardtii]
Length = 292
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 8 GAAAFAGGGFMPSQA------TTVPDPSSSFSKNRNVRTLLPMTVKQL-SELSSNDESSA 60
GA+ F GGGFMPS A +N+N +L T++ L E +S ++
Sbjct: 10 GASQFGGGGFMPSPAPGHDNQYGGGGGGQQKGRNQN-NSLRAFTIRHLLKETASTEDDRV 68
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ-MEFNEVNQISKGM 119
DG +++T+T++G V ++ + + DGT +E W + M+ + + G
Sbjct: 69 KADGHEISTVTILGKVTSYRELSTRVQLQLHDGTASMEVCSWVDDADMQAQKPVEWQVGK 128
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
YVRVYG+LK F+ KRSL A++++P+ D NE+T HF++C+ L+ T+
Sbjct: 129 YVRVYGNLKTFEGKRSLTAFAVKPVTDHNEVTYHFLQCVMQHLHLTK 175
>gi|413943273|gb|AFW75922.1| hypothetical protein ZEAMMB73_214336 [Zea mays]
gi|413943274|gb|AFW75923.1| hypothetical protein ZEAMMB73_214336 [Zea mays]
Length = 183
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 13/171 (7%)
Query: 9 AAAFAGGGFMPSQ-ATTVPD------PSSSFSKNRNVRTLLPMTVKQLS------ELSSN 55
A+ FAG +PSQ AT PD PS + S++ TV+ ++ + + +
Sbjct: 2 ASYFAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATGD 61
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
+ IDG D + ++G V + + E F +DDGTG+I +RW E ++ EV +
Sbjct: 62 GDLVIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFV 121
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
G+Y++V L FQ K+ A ++RP+ +FNE+ HF+ECIY+ L N R
Sbjct: 122 QNGIYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVR 172
>gi|393216998|gb|EJD02488.1| replication protein A, subunit RPA32 [Fomitiporia mediterranea
MF3/22]
Length = 273
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 137/275 (49%), Gaps = 34/275 (12%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNV-RTLLPMTVKQ-LSELSSNDESSASIDGADVNTIT 71
GGGFM + + +S + R ++L P+T+KQ L ++ ++ ID +V IT
Sbjct: 7 GGGFMANSSPRTSSQNSPGGERRAASQSLRPVTIKQVLKADQAHSDAELYIDRTEVAQIT 66
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ---ISKGMYVRVYGHLK 128
VV V + ++ ++ IDDGTGRIE W + N+ + +S G YVRV G LK
Sbjct: 67 VVAQVILVANQATNNVYHIDDGTGRIEARVWTDGSGDENQTDDHDGVSPGSYVRVTGVLK 126
Query: 129 AFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYN- 187
FQ+KR +NA ++RPI D +E+ H E +YV L +LR Q++NS+ ++ N
Sbjct: 127 HFQNKRYINASNIRPIKDAHELYFHLEEVMYVTL---QLR-----NDQLSNSDKAEDANG 178
Query: 188 -------------AISSNHYSFDEGKSIDQM--VLDFLRR-PEFLAN---NNGVHRNVIS 228
A SN+ S DQ RR +F+A + GVH I+
Sbjct: 179 SFAASTTLGGGTSANYSNYTSHPTATKSDQYPGSTPLQRRITQFIATITADEGVHVAKIA 238
Query: 229 QQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSA 262
+++ + + + ALE L + VY +I+E H K A
Sbjct: 239 REMKVDAELVSAALEDLLNDGHVYTTINESHVKLA 273
>gi|169608065|ref|XP_001797452.1| hypothetical protein SNOG_07099 [Phaeosphaeria nodorum SN15]
gi|160701551|gb|EAT85750.2| hypothetical protein SNOG_07099 [Phaeosphaeria nodorum SN15]
Length = 281
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 40 TLLPMTVKQL--SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+L P+T+KQL ++L + + IDG+ V+ +T VG + ++ + + +DDGTG I
Sbjct: 48 SLRPVTIKQLLDAQLEAGSNDTFKIDGSPVSQLTFVGQIRNISTQTTNTTYRLDDGTGSI 107
Query: 98 ECSRWAHEQMEFNEVN----QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
E +W ++ N ++ +G Y R +G LK+F D+RS+ A +RP+ D NE++ H
Sbjct: 108 EVKQWVDSDT-VDQTNPTKAKLVEGAYCRAWGKLKSFNDRRSVGAQIIRPVEDMNEVSYH 166
Query: 154 FVECIYVQLYNTRLRGGSSNQ----PQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDF 209
+E V L+ TR G +N +TN + Y + V ++
Sbjct: 167 LLEATSVHLFFTRGPPGGANTGTGAAAVTNGGGQQGTGGGDYGGYDLRTLTPAARKVFNY 226
Query: 210 LRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
LR E +N G+H++ IS QL + + A + L L+Y+
Sbjct: 227 LRSTE--QSNEGIHQHAISAQLGMDTADVARAGDDLLAGGLIYT 268
>gi|195620672|gb|ACG32166.1| hypothetical protein [Zea mays]
Length = 183
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 87 IFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+F +DDGTG+I+ +RW +E + E+ + YV V G LK FQ KR + AY++R + +
Sbjct: 12 VFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTN 71
Query: 147 FNEITSHFVECIYVQLYNTRLR--------GGSSNQPQMTNSNHLKEYNAISSNHYSFDE 198
FNEIT HF+ CI V + T L+ GG ++ P N +
Sbjct: 72 FNEITCHFLHCIQVHMELTGLKIYSSAATYGGVAHAPSQPNPV----------------D 115
Query: 199 GKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEF 257
G I +VL P + +G+H + +L LP D + A++ + +Y +ID+F
Sbjct: 116 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 175
Query: 258 HYKSAVNA 265
HYKS N
Sbjct: 176 HYKSVRNG 183
>gi|63054444|ref|NP_588227.2| single-stranded DNA binding protein Ssb2 [Schizosaccharomyces pombe
972h-]
gi|2498849|sp|Q92373.1|RFA2_SCHPO RecName: Full=Replication factor A protein 2; AltName:
Full=Single-stranded DNA-binding protein P30 subunit
gi|1502415|gb|AAC49438.1| single-stranded DNA binding protein p30 subunit
[Schizosaccharomyces pombe]
gi|157310517|emb|CAA21823.2| single-stranded DNA binding protein Ssb2 [Schizosaccharomyces
pombe]
Length = 279
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 24/237 (10%)
Query: 41 LLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
L P+T+KQ+ S + ++ IDG +V +T VG++ ++ + + I+DGTG IE
Sbjct: 50 LRPVTIKQILNASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEV 109
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
W H + +++++ YVRVYG++K F K + + +R I D NE+ HF+E I
Sbjct: 110 RHWEH----IDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIA 165
Query: 160 VQLYNTRLRGG--SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLA 217
V L+ T+ +N P SN L YN ISSN S++Q + ++ P +
Sbjct: 166 VHLHFTQKANAVNGANAPGYGTSNALG-YNNISSN----GAANSLEQKLAEYSLTPAQMT 220
Query: 218 ----------NNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSAV 263
N GVH ++Q + +D L + L + ++Y +IDE H+KS +
Sbjct: 221 VMQAIHSAPETNEGVHVRQLAQSVGPGID-LTAVTDFLQQEGIIYTTIDENHFKSVL 276
>gi|451848328|gb|EMD61634.1| hypothetical protein COCSADRAFT_233570 [Cochliobolus sativus
ND90Pr]
Length = 273
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 18/224 (8%)
Query: 40 TLLPMTVKQL----SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
++ P+T+KQ+ E SND + IDG ++ +T+VG + ++ ++ + +DDGTG
Sbjct: 45 SIRPVTIKQIIDAQGEAGSND--TFKIDGTVISQLTLVGQIRNISNQTTNTTYRLDDGTG 102
Query: 96 RIECSRWAH-EQMEFNEVNQ--ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITS 152
IE +W + E ++ + + + + +G Y R +G LK+F D++S+ A +RPI D NEI+
Sbjct: 103 SIEVKQWVNPETVDHSSLAKAKLVEGAYCRAWGKLKSFNDRKSVGATIIRPIEDMNEISY 162
Query: 153 HFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQM---VLDF 209
H +E + LY TR G Q +N + AI Y E Q V +F
Sbjct: 163 HLLEATAIHLYFTR---GPPGQAGGATTNEAGKQQAIEGG-YGGAELAGYSQAAKRVFNF 218
Query: 210 LRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
LR E +N GV++ I+ +L + + +A E L L+Y+
Sbjct: 219 LREVE--QSNEGVNQYEIASKLGIDAADVAKAGEDLLAGGLIYT 260
>gi|325187467|emb|CCA22005.1| replication protein A 32 kDa subunit putative [Albugo laibachii
Nc14]
Length = 284
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 43/292 (14%)
Query: 1 MYSGEFDG---AAAFAGGGFMPS---QATTVPDPS-----SSFSKNRNVRTLLPMTVKQL 49
M GE+D ++ GGFM S Q+T D S+ S +R+ +TLLP+T++QL
Sbjct: 1 MNYGEYDSHENKYSYGAGGFMGSSNQQSTQGFDKGDGVERSNISGSRDSQTLLPITLRQL 60
Query: 50 SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW-AHEQME 108
+ +DG +++ + VGI+ ++ F +DDG+G I+ + A E ++
Sbjct: 61 QAQDQAMDDVFRVDGREISIVKAVGILQNVIPHSTNVNFQLDDGSGIIDGRLFVAQEDLD 120
Query: 109 F--NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
N ++++ G+YV G L+ FQ K S + YS+ PI DFN IT HF+E +Y YNTR
Sbjct: 121 HADNIMSRLHDGIYVSAVGQLRTFQGKTSFSCYSVVPIEDFNAITLHFLEVMYTHCYNTR 180
Query: 167 --LRGGSSNQPQ-------------MTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR 211
L+ + +Q Q M N+N ++ A+ S SF + I VLD L
Sbjct: 181 GNLQKANPSQHQTSSTGAPWAPQGPMVNTN--SDFGALDS---SFSPEQKI---VLDVLG 232
Query: 212 RPEFLANNNGVHRNVISQQLNLPMD--KLMEALESLNENSLVYS-IDEFHYK 260
N+ G+ + I Q+ M +L L L VYS IDE H+K
Sbjct: 233 T---CTNDEGLPVDRIYAQVQHQMSEPQLQNVLMYLTSEGHVYSTIDENHFK 281
>gi|226528868|ref|NP_001151380.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195646308|gb|ACG42622.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 337
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 9 AAAFAGGGFMPSQ-ATTVPD------PSSSFSKNRNVRTLLPMTVKQLS------ELSSN 55
A+ FAG +PSQ AT PD PS S++ TV+ ++ E + +
Sbjct: 2 ASYFAGPAIVPSQHATAAPDNSAVATPSPVKSRDPRFSGSASTTVRHIARSFAAAEATGD 61
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
+ IDG D + ++G V + + E F +DDGTG+I +RW E ++ EV +
Sbjct: 62 GDLVIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFV 121
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR 168
G+Y++V L FQ K+ A ++RP+ +FNE+ HF++CIY+ L N R +
Sbjct: 122 QNGIYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIDCIYLHLENVRQK 174
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 202 IDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLM-EALESLNENSLVYSIDEFHYK 260
+ MVL+ ++RP+ LA NGVH + ++++L +P ++M A +N L +ID++H+K
Sbjct: 275 LQSMVLEVMQRPDILALENGVHVDEVARRLGMPSAQIMVTARRLVNLACLCSTIDDYHFK 334
Query: 261 S 261
S
Sbjct: 335 S 335
>gi|255956779|ref|XP_002569142.1| Pc21g21700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590853|emb|CAP97067.1| Pc21g21700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 276
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 24/257 (9%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGI 75
FMP + + P+ + +R+ +TL P+TVKQ+ + S E+ +DGADV + +G
Sbjct: 19 FMPGETNS---PAGGKTFDRDNKTLRPVTVKQVLDASQPFPEAPFQVDGADVANVLFMGQ 75
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAH----EQMEFNEVNQISKGM-------YVRVY 124
V ++ + + IDDGTG IE +W + M+ ++ G Y RV+
Sbjct: 76 VRNISSQSTNVTYKIDDGTGEIEVKKWVDSTTADNMDTDDGKAPGDGKTELELNGYARVF 135
Query: 125 GHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLK 184
G +K+F +KR + A+S+RP+ + NE+ +H +E V L+ TR G + + +
Sbjct: 136 GSIKSFGNKRYIGAHSVRPLSNINELHTHLLEATAVHLFFTRGPPGGAAPGGNAGGDAVM 195
Query: 185 EYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLA----NNNGVHRNVISQQLNLPMDKLME 240
++ Y + K++ M L + L ++ G+H VI+ +LN+P ++
Sbjct: 196 G----GADDYGSGQNKALASMSLVAKKIYNLLKTEPQDDTGLHMQVIASKLNMPATEVAR 251
Query: 241 ALESLNENSLVYS-IDE 256
A E L +++S +DE
Sbjct: 252 AGEELLGAGVIFSTMDE 268
>gi|154299714|ref|XP_001550275.1| hypothetical protein BC1G_11483 [Botryotinia fuckeliana B05.10]
Length = 289
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 26 PDPSSSFSKNRNVRTLLPMTVKQLSE-LSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P S ++ K+ TL P+T+KQ+ E + + ++ IDG++V ++ VG V + +
Sbjct: 43 PGGSKTYGKD----TLRPVTIKQILEAVQPHPDADFKIDGSEVTQLSFVGQVHSISTQAT 98
Query: 85 QFIFLIDDGTGRIECSRWAHEQMEFNEVNQI-SKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ +DDGTG IE +W + +G Y+ V+G LK+F DKR + A+ +RP
Sbjct: 99 NNTYKVDDGTGLIEVKQWIDNDASPENARPVPEEGKYIHVWGRLKSFHDKRHVGAHIIRP 158
Query: 144 IIDFNEITSHFVECIYVQLYNTRL---RGGSSNQPQMTNSNHLKEYNA-ISSNHYSFDEG 199
++D NE+T H +E LY TR G+ + + + + Y + + S G
Sbjct: 159 VLDMNEVTFHGLEATLAHLYFTRGPVDTAGTMAKKEGGDGMFVDSYGGNMGAGDASTGGG 218
Query: 200 KSI-------DQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLV 251
K + +MV D L+ P+ NN G++ N+I+ +L +P+ + + + L +
Sbjct: 219 KILPAKVSRNSRMVFDLLQSEPQ---NNEGLNVNMIATKLGMPVADVYKCGDELLAEGCI 275
Query: 252 YS 253
Y+
Sbjct: 276 YT 277
>gi|348665064|gb|EGZ04899.1| hypothetical protein PHYSODRAFT_535287 [Phytophthora sojae]
Length = 267
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
Query: 34 KNRNVRTLLPMTVKQLSEL--SSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLID 91
++ +++LP+++KQL L +S D+ + +DG +++T+ +VG++ ++ F +D
Sbjct: 15 RSGGAQSILPVSIKQLQTLGGASGDDDALRLDGQELSTVRLVGLLTNLTPHSTSLRFQLD 74
Query: 92 DGTGRIECSRWA---HEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFN 148
DG+G +C + +E+N++ G YVRV G L++FQ K SL+ +++ P+ D N
Sbjct: 75 DGSGAFDCQYFVTADDPDASESEMNRLRDGSYVRVVGKLRSFQGKASLSCFNVTPVDDLN 134
Query: 149 EITSHFVECIYVQLYNTR 166
E+T H +E IYV YNTR
Sbjct: 135 ELTHHLLEVIYVHCYNTR 152
>gi|358384700|gb|EHK22297.1| hypothetical protein TRIVIDRAFT_84151 [Trichoderma virens Gv29-8]
Length = 276
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 18/227 (7%)
Query: 39 RTLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+L P+T+KQ+ L + + S + +DGA + IT VG V + ++ +DDGTG
Sbjct: 44 ESLRPLTIKQI--LDAEEPYSGADFKVDGAPITQITFVGQVLSINPQQTNLTIKVDDGTG 101
Query: 96 RIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
+I+ +W + + G ++RV+G LK+F +KR + A+ +RP+ DFNE+ H +
Sbjct: 102 QIDVKKWIDADKQSDAEPGFELGSHIRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHLL 161
Query: 156 ECIYVQLYNTR-LRGGSSNQPQMTNS---NHLKEYNAISSN-----HYSFDEGKSIDQMV 206
E YV L+ TR G S P ++S + YNA + S G + + V
Sbjct: 162 EATYVHLFYTRGAVGDSGAGPNNSDSMFVDGGDGYNAGNGGAQLPSKLSGCSGNA--KRV 219
Query: 207 LDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
++L E N+G+H N I+ L L + ++ A + L ++Y+
Sbjct: 220 YNYLN--ETPGGNDGMHLNNITGALGLAVRDVLTAADELLGLGIIYT 264
>gi|406865248|gb|EKD18290.1| putative replication protein A 32 kDa subunit [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 330
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 7/224 (3%)
Query: 40 TLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T+KQ+ + + +S IDG++V +T +G + + + + +DDGTG IE
Sbjct: 99 TLRPVTIKQIIDAQQPHPDSDFKIDGSEVTQLTFIGQINQISSQATNTTYKLDDGTGLIE 158
Query: 99 CSRWAHEQMEFNEVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W + + K G Y+RV+G LKAF +KR + A+ +RP+ DFNE++ H +E
Sbjct: 159 VKQWVDSDADPDAAKDFPKEGEYLRVWGRLKAFNNKRHVGAHMIRPVKDFNEVSYHLLEA 218
Query: 158 IYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLA 217
V LY TR + + + NA ++ K +M R E L
Sbjct: 219 TAVHLYFTRGPPELNGVKSEGGNGMFVDSNAGANGAMGGQTKKLPPKMTSIAKRVYEVLK 278
Query: 218 ----NNNGVHRNVISQQLNL-PMDKLMEALESLNENSLVYSIDE 256
NN G+H ++I+ QL + P + E L E ++ ++D+
Sbjct: 279 NSPQNNEGMHVHLIASQLGVNPNEVFKAGDELLGEGAIYTTVDD 322
>gi|255078722|ref|XP_002502941.1| predicted protein [Micromonas sp. RCC299]
gi|226518207|gb|ACO64199.1| predicted protein [Micromonas sp. RCC299]
Length = 250
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 40 TLLPMTVK--QLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+L+P+TVK Q + +SN + ++G +V+ IT++G + + D ++ +DDGTG +
Sbjct: 25 SLVPVTVKMLQTAIAASNVDDGLRVNGEEVHNITLLGKIIEASDTATNQVYTLDDGTGTV 84
Query: 98 ECSRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
+W A + + +++ G Y RVYGH+K F S+ A+S+RP+ D NE+T HF+
Sbjct: 85 IVKQWVDADDADASSRKDELVVGKYARVYGHVKQFGSDTSVVAFSVRPVQDHNEVTYHFL 144
Query: 156 ECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEF 215
E +Y +N + + +P + ++ ++ + D G S P+
Sbjct: 145 EAVYCNSHNAQR---ADAKPAAGTA--YAAPSSAPASAPAVDPGGSCVDQAKAIFEGPDG 199
Query: 216 LANNNGVHRNVISQQLN--LPMDKLMEALESL-NENSLVYSIDEFHYKS 261
+ GV +V+ QQLN ++ EA+E L NE L +ID+ H+KS
Sbjct: 200 R-RDEGVKIDVVVQQLNGRFTEAQVREAVEHLVNEGHLYSTIDDDHFKS 247
>gi|323448499|gb|EGB04397.1| hypothetical protein AURANDRAFT_32654 [Aureococcus anophagefferens]
Length = 242
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 17/244 (6%)
Query: 36 RNVRTLLPMTVKQL--SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDG 93
R+ ++L+PMT+KQ+ + ++ ++ ++DG +VN + VVG + KE + ++ I+D
Sbjct: 2 RDKQSLIPMTIKQVLSATKAAGEDDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQ 61
Query: 94 TGRIECSRWAHEQMEFNEVNQISK----GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
TG +EC+ W +++ V + ++ G YV V G LK + K +++AY +RPI DFNE
Sbjct: 62 TGMLECTMWVNQEEAGATVEERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNE 121
Query: 150 ITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYN------AISSNHYSFDEGKSID 203
IT H++E IY T + ++ +N + + S D G + D
Sbjct: 122 ITHHYLEAIYSHAKQTNAI-KTGGGGAAAPASAFGAFNPSGGRVSADAMDTSGDGGMTAD 180
Query: 204 QM-VLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
Q V +F + G + N ++ L + ++++ +E L+ +YS ID+ H+KS
Sbjct: 181 QTKVFNFYTTEG--TGDEGCNVNSVASSLAMDLNQVKHIVEFLSSEGHLYSTIDDDHHKS 238
Query: 262 AVNA 265
+A
Sbjct: 239 TSDA 242
>gi|169773153|ref|XP_001821045.1| possible replication factor-a protein [Aspergillus oryzae RIB40]
gi|238491102|ref|XP_002376788.1| possible replication factor-a protein [Aspergillus flavus NRRL3357]
gi|83768906|dbj|BAE59043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697201|gb|EED53542.1| possible replication factor-a protein [Aspergillus flavus NRRL3357]
gi|391865917|gb|EIT75196.1| single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Aspergillus oryzae 3.042]
Length = 276
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 28/260 (10%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGI 75
F+P + + P++ S + N TL P+T+KQ L E+ IDGADV +I VG
Sbjct: 17 FVPGETNS---PAAGKSADGNNTTLRPITIKQALDATQPYPEADYQIDGADVGSICFVGQ 73
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAH----EQMEFNEV------NQISKGMYVRVYG 125
V ++ + + IDDGTG IE +W + M+ ++ NQ+ Y +++G
Sbjct: 74 VRNISTQSTNITYRIDDGTGEIEVKQWVDSATADTMDTDDSKAGAGKNQVVNNGYAKIFG 133
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKE 185
LK F +KR + ++ +RP+ D NE+ H +E + V L+ TR G S
Sbjct: 134 KLKTFGNKRFVGSHCVRPLTDINELHCHMLEAVAVHLFFTRGPVGGSGGAGAAAGGAGGA 193
Query: 186 YNAISS-NHYSFDEGKSIDQM------VLDFLR-RPEFLANNNGVHRNVISQQLNLPMDK 237
+ + YS G+++ M V + L+ P+ +N G+H +I+ +L+LPM
Sbjct: 194 DATMGGVDDYS--AGRNLPAMSPVARRVYNLLKTEPQ---SNEGLHAQLIAAKLSLPMPD 248
Query: 238 LMEALESLNENSLVYS-IDE 256
+ A + L +++S +DE
Sbjct: 249 VARAGDELLTAGVIFSTVDE 268
>gi|384500902|gb|EIE91393.1| hypothetical protein RO3G_16104 [Rhizopus delemar RA 99-880]
Length = 241
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 28/259 (10%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITV 72
GGG+M + + K + +TL P+T+KQ+ + E ID AD +T
Sbjct: 3 GGGYMNNSFEGSGNEGGFARKPMSEQTLRPVTIKQIRTAEAPAGEGICKIDKADCTQVTF 62
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRW---AHEQMEFNEVNQISKGMYVRVYGHLKA 129
VGI+ ++ + + ++ I+DGTG + +W + E + + + +YVRVYG L
Sbjct: 63 VGIIRNIHELQMNMVYTIEDGTGSTDVRKWIEQNETEEEAEDRRALVRDIYVRVYGRLNY 122
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAI 189
F ++ S+ A+S+RPI+DFNEIT HF++ I + ++ P NS ++ N
Sbjct: 123 FNNRVSVAAFSIRPIVDFNEITYHFLDAINAHVIFSK--------PSKKNSLFVETSN-- 172
Query: 190 SSNHYSFDEGKSI-DQMVLDFLRRPEFLANNNGVHRNVISQQLN--LPMDKLMEALESL- 245
G SI ++D L+ L +GV + I ++L D++ A++ +
Sbjct: 173 --------RGNSIVADRIMDILKDQHHL--EDGVTLDFIIEKLRTLYTEDEVRTAMQHIE 222
Query: 246 NENSLVYSIDEFHYKSAVN 264
NE + +ID+ HYKS ++
Sbjct: 223 NEGQVYTTIDDSHYKSCMD 241
>gi|225320683|dbj|BAH29737.1| replication protein A 32 kDa subunit [Dicyema japonicum]
Length = 250
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 13 AGGGFMP-SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTIT 71
A G F S+ P+ + K R+ +TL+P ++ QL +S + I A+++ IT
Sbjct: 5 ADGSFASESETKAFGSPADTKIKQRS-QTLIPCSISQLV-VSQQIDDRFVIGRAELSQIT 62
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTG-RIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAF 130
+VG++ +++ + + +DD +G I+ + +E + V+Q+ +G YVRV+G+L++F
Sbjct: 63 IVGLIKSVKESPSRLDYELDDHSGYTIQVKLFV--DVEDSSVSQLHEGQYVRVFGNLRSF 120
Query: 131 QDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN-SNHLKEYNAI 189
RS+ A+ + PI+D NEIT H E +Y L+ + R + P+M + ++ + NA
Sbjct: 121 ASVRSVVAFKILPIMDINEITMHLAEVVYSHLFLS--RPPKTAAPKMADFPSNFQTSNA- 177
Query: 190 SSNHYSFDEG--KSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLN 246
SN SF EG + + V++ +R + + G+H + + +QL NL L E ++ L+
Sbjct: 178 -SN--SFLEGGLTPVQRQVMEAIRANK---DEQGIHMSALQRQLRNLGASVLNETVDKLS 231
Query: 247 ENSLVYS-IDEFHYKS 261
E +YS IDE H+K+
Sbjct: 232 EEGYIYSTIDEHHFKT 247
>gi|67516601|ref|XP_658186.1| hypothetical protein AN0582.2 [Aspergillus nidulans FGSC A4]
gi|40747525|gb|EAA66681.1| hypothetical protein AN0582.2 [Aspergillus nidulans FGSC A4]
gi|259489153|tpe|CBF89190.1| TPA: possible replication factor-a protein (AFU_orthologue;
AFUA_6G11130) [Aspergillus nidulans FGSC A4]
Length = 278
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 25/255 (9%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGI 75
FMP + T+ PS + N TL P+T+KQ+ + + E++ +IDG DV++I +G
Sbjct: 19 FMPGETTS---PSGGRQEWNNT-TLRPVTIKQILDATQPYPEANFTIDGQDVSSIVFIGQ 74
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAH--EQMEFNE--------VNQISKGMYVRVYG 125
V ++ + + +DDGTG +E +W + E M+ E +N + Y +V+G
Sbjct: 75 VRNISTQATNVTYKLDDGTGEVEAKQWINPSEAMDTTEDFGKEGKDLNGVEINGYAKVFG 134
Query: 126 HLKA-FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR----LRGGSSNQPQMTNS 180
LK+ F D++ +N + +RP+ D NE+ HF+E V L++TR G++ + ++
Sbjct: 135 KLKSLFGDRKVVNTHCVRPLTDINELHVHFLEAAAVHLFHTRGAPGPAAGATGKIDGGDA 194
Query: 181 NHLKEYNAISSNHYSFDEGKSID-QMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKL 238
A F S + V + LR P+ NN G+H I+ +L LP +
Sbjct: 195 AMGGLDGAGVGGGGGFPANMSATARRVYNLLRTEPQ---NNEGLHAQFIAAKLGLPPQDV 251
Query: 239 MEALESLNENSLVYS 253
+ A + L +V+S
Sbjct: 252 VRAGDELINAGMVFS 266
>gi|119471858|ref|XP_001258231.1| possible replication factor-a protein [Neosartorya fischeri NRRL
181]
gi|119406383|gb|EAW16334.1| possible replication factor-a protein [Neosartorya fischeri NRRL
181]
Length = 338
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 25/258 (9%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGI 75
FMP + + P+ N N TL P+TVKQ + S E++ IDGAD ++ +G
Sbjct: 80 FMPGEMNS---PAGGKGDNNNA-TLRPITVKQALDASQPYPEAAFQIDGADAASVCFIGQ 135
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ----MEFNE------VNQISKGMYVRVYG 125
V ++ + + IDDGTG IE +W Q ME ++ NQ+ + +V+G
Sbjct: 136 VRNISSQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVELNGFAKVFG 195
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKE 185
+K+F +KR + A+ +RP + NE+ H +E + L+ TR G + + +
Sbjct: 196 KIKSFGNKRYVGAHCVRPTTNLNEVHCHLLEAAAIHLFFTRGPPGGGAAGGASGAGAGAD 255
Query: 186 YNAISSNHYSFDEG-----KSIDQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLM 239
+N Y + V + L+ P+ +N G+H +I+ +LNLPM +
Sbjct: 256 AAMGGANDYGVGNSNLPAMSPAARRVYNLLKTEPQ---SNEGLHAQLIAAKLNLPMPDVA 312
Query: 240 EALESLNENSLVYS-IDE 256
A E L +++S +DE
Sbjct: 313 RAGEELLTAGVIFSTVDE 330
>gi|70992297|ref|XP_750997.1| possible replication factor-a protein [Aspergillus fumigatus Af293]
gi|66848630|gb|EAL88959.1| possible replication factor-a protein [Aspergillus fumigatus Af293]
gi|159124567|gb|EDP49685.1| possible replication factor-a protein [Aspergillus fumigatus A1163]
Length = 289
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 25/258 (9%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGI 75
FMP + + P+ N N TL P+TVKQ + S E++ IDGAD ++ +G
Sbjct: 31 FMPGEMNS---PAGGKGDNNNA-TLRPITVKQALDASQPYPEAAFQIDGADAASVCFIGQ 86
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ----MEFNE------VNQISKGMYVRVYG 125
V ++ + + IDDGTG IE +W Q ME ++ NQ+ + +V+G
Sbjct: 87 VRNISSQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVELNGFAKVFG 146
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKE 185
+K+F +KR + A+ +RP + NE+ H +E + L+ TR G + + +
Sbjct: 147 KIKSFGNKRYVGAHCVRPTTNLNEVHCHLLEAAAIHLFFTRGPPGGGAAGGASGAGANAD 206
Query: 186 YNAISSNHYSFDEG-----KSIDQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLM 239
+N Y + V + L+ P+ +N G+H +I+ +LNLPM +
Sbjct: 207 AAMGGANDYGTGNSNLPAMSPAARRVYNLLKTEPQ---SNEGLHAQLIAAKLNLPMPDVA 263
Query: 240 EALESLNENSLVYS-IDE 256
A E L +++S +DE
Sbjct: 264 RAGEELLTAGVIFSTVDE 281
>gi|449295672|gb|EMC91693.1| hypothetical protein BAUCODRAFT_79701 [Baudoinia compniacensis UAMH
10762]
Length = 255
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 35/257 (13%)
Query: 18 MP-SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN--DESSASIDGADVNTITVVG 74
MP SQ+ P+ S+ K+ TL P+T+KQL + + D IDGA+ +T VG
Sbjct: 1 MPGSQSNDSPNSKRSYGKD----TLRPVTIKQLQDATHPHPDAEYFIIDGAEATQVTFVG 56
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFN-EVNQ-------ISKGMYVRVYGH 126
+ ++ + + +DDGTG +E W + EFN E NQ + +G Y RV+G
Sbjct: 57 QIRNISTQTTNVTYRMDDGTGTMEVKVWIDAE-EFNGEENQAVAKPKPVEQG-YARVWGR 114
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
LKAF +KR + A +RP+ DFNEI H +E V L+ TR S+ Q +
Sbjct: 115 LKAFNNKRHVGANIIRPLQDFNEIQYHLLEATAVHLFFTRGPPESATAQQSKTGG--AQA 172
Query: 187 NAISSNHYSF-DEG---------KSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMD 236
N +++ H + EG K + Q++ + E GVH I+ N+ +
Sbjct: 173 NGMANGHAAVGGEGLPAGTSQATKKVYQLISTLPQGHE------GVHVQQIAMAGNMEVS 226
Query: 237 KLMEALESLNENSLVYS 253
++++A + LN +YS
Sbjct: 227 EVLKATDDLNGMGKIYS 243
>gi|320586250|gb|EFW98929.1| putative replication factor-a protein [Grosmannia clavigera kw1407]
Length = 278
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 24/243 (9%)
Query: 29 SSSFSKNRNVRTLLPMTVKQL--SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
+S +N N +L P+T+KQL +E + S +IDGA +T+VG V + +
Sbjct: 32 ASQGGRNYNEDSLRPVTIKQLLDTEEAYPGASEFTIDGAAATQLTLVGQVRAVNPQPTNV 91
Query: 87 IFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+ IDDGTG IE +W + + +VRV+G LK F KR + A+ LR I D
Sbjct: 92 TYRIDDGTGCIEVKKWVDADKNEEAEARFALDQHVRVFGRLKLFNQKRYVGAHFLRAIDD 151
Query: 147 FNEITSHFVECIYVQLYNTR----------------LRGGSSNQPQMTNSNHLKEYNAIS 190
+NE++ H +EC YV L TR G+ N + + +
Sbjct: 152 YNEVSYHMLECTYVHLCLTRGAPEAGAGAGAGAGAANSAGTHNDSMFVDQDGGGYGGGSA 211
Query: 191 SNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
+ + G Q + FLR N G++ NVI +L L M A++ L +N++
Sbjct: 212 ATRHLSPNG----QKIYHFLR--NMATGNEGINVNVIINELKLGYGPTMTAIQELTDNAV 265
Query: 251 VYS 253
+++
Sbjct: 266 IFA 268
>gi|308810557|ref|XP_003082587.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit (ISS) [Ostreococcus tauri]
gi|116061056|emb|CAL56444.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit (ISS) [Ostreococcus tauri]
Length = 262
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 1 MYSGEFDGAAAFAGG-GFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQL-----SELSS 54
MY GE A FAG G+M + P +S N T+ P+TVK + + S
Sbjct: 1 MYGGE--SATQFAGATGYMGEPDASGMKPRASGGNQPN--TMTPVTVKMIKGALDARASP 56
Query: 55 NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ 114
+DE ++G + IT+VG V D+Q K Q ++ +DD TG+ + W V +
Sbjct: 57 DDE--IKVNGMAIMNITLVGKVVDVQTKGSQVVYRLDDSTGQTDVKVWLDSD---GPVEE 111
Query: 115 ISKGMYVRVYGHLKAFQDKRSLNAY---SLRPIIDFNEITSHFVECIYVQLYNTRLRGGS 171
I +G YVRVYG KA + + A+ S+R I DFNEIT H +E IY Y +++ G
Sbjct: 112 IPRGAYVRVYGTPKAVGADQVIAAHTTESIRVITDFNEITYHLLEVIYASGYAAKVKSGG 171
Query: 172 SNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNN-----GVHRNV 226
T Y+A+ + +G M R F+ NN G+
Sbjct: 172 G----ATGVAPQSVYSAVQAAPNVAADG----DMNGSLCDRVLFIVKNNPNGDTGISVLE 223
Query: 227 ISQQLN--LPMDKLMEALESLNENSLVY-SIDEFHYKS 261
+ ++L + + LESL+ + VY ++DE HY++
Sbjct: 224 VVEKLGGQFTDAAVRQELESLSNDGAVYTTVDEDHYQA 261
>gi|425777535|gb|EKV15703.1| putative replication factor-a protein [Penicillium digitatum Pd1]
gi|425779559|gb|EKV17606.1| putative replication factor-a protein [Penicillium digitatum PHI26]
Length = 278
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 18 MPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIV 76
MP + + P+ + +R+ +TL P+TVKQ+ + S E+ IDGADV + +G V
Sbjct: 21 MPGETNS---PAGGKTGDRDNKTLRPVTVKQVLDASQPFPEAPFQIDGADVANVLFMGQV 77
Query: 77 CDMQDKEPQFIFLIDDGTGRIECSRW----AHEQMEFNEVNQISKGM-------YVRVYG 125
++ + ++IDDGTG E +W + M+ ++ G + RV+G
Sbjct: 78 RNISSQSTNVTYIIDDGTGECEVKKWIDSTTADNMDTDDGKASGDGKTELQLNGFARVFG 137
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKE 185
+K+F +KR + A+S+RP+ + NE+ +H +E V L+ TR G +
Sbjct: 138 SIKSFANKRYIGAHSVRPLSNINELHTHLLEATAVHLFFTRGPPGGTAAGGNAAGGDAVM 197
Query: 186 YNAISSNHYSFDEGKSIDQMVLDFLRRPEFLA----NNNGVHRNVISQQLNLPMDKLMEA 241
A ++Y + K++ M L + L ++ G+H VI+ +LN+P ++ A
Sbjct: 198 GGA---DNYGGGQNKALASMSLVAKKVYNLLKTEPQDDTGLHMQVIASKLNMPATEVARA 254
Query: 242 LESLNENSLVYS-IDE 256
E L +++S +DE
Sbjct: 255 GEELLGAGVIFSTMDE 270
>gi|426200096|gb|EKV50020.1| hypothetical protein AGABI2DRAFT_190434 [Agaricus bisporus var.
bisporus H97]
Length = 275
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 31/253 (12%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
P S ++ +L P+ Q + ++++ +DG +V +T+VG + M +
Sbjct: 29 PGSGQQRSEAASSLRPINSFQYRKAEQPHNDAPWVLDGFEVGLVTMVGHLVSMHLQTTNH 88
Query: 87 IFLIDDGTGRIECSRW----AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
++ ++DG GR+E W + + E + I +G+YVR+ G LK+F K+ +NA +R
Sbjct: 89 VYTLEDGLGRVEARHWVGSSTNAEQEMEKWGDIKEGIYVRLTGFLKSFGGKKYINATYMR 148
Query: 143 PIIDFNEITSHFVECIYVQLYNTRLRGGSSN--QPQMTNSNHLKEYNAISSNHYSFDEGK 200
P+ DF+EI HF+ECI V L T RG N Q N+ +K SS+ Y D
Sbjct: 149 PVTDFSEIDFHFLECITVTL--TLERGPHYNFGIGQQQNATGVK-----SSSAYQLDNSM 201
Query: 201 SI----------DQMVLDFLRRPEFLANNNGVHRNVISQQL---NLPMDKLMEALESLNE 247
I +Q ++ FL + +GVH I++ + + DKL A++SL +
Sbjct: 202 DIRDEYSHLPPLEQQIIRFLISQD---QKDGVHVATIARAIGKSDEDADKLSTAMDSLMD 258
Query: 248 NSLVY-SIDEFHY 259
N ++ +ID+ H+
Sbjct: 259 NGHLFNTIDDCHF 271
>gi|396463070|ref|XP_003836146.1| similar to replication protein A 32 kDa subunit [Leptosphaeria
maculans JN3]
gi|312212698|emb|CBX92781.1| similar to replication protein A 32 kDa subunit [Leptosphaeria
maculans JN3]
Length = 274
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 15/223 (6%)
Query: 40 TLLPMTVKQLSELSSNDESSA--SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+L P+T+KQ+ E +++ S IDGA +T VG + ++ + + +DDGTG I
Sbjct: 45 SLRPVTIKQILEATTDSSSKDEFKIDGA---IVTFVGQIRNISTQTTNTTYRLDDGTGSI 101
Query: 98 ECSRWAHEQMEFNEVN----QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
E +W + N ++ +G Y R +G LK+F D++S+ A +R I D NEI+ H
Sbjct: 102 EVKQWVDSDA-VDHTNPAKAKLVEGAYCRAWGKLKSFNDRKSVGAQIIRAIEDMNEISYH 160
Query: 154 FVECIYVQLYNTRLRGGSSNQPQMT-NSNHLKEYNAISSN--HYSFDEGKSIDQMVLDFL 210
+E V LY TR G++N T N+ ++ A S N Y+ + + V FL
Sbjct: 161 LLEATAVHLYFTRGPPGAANTGVATNNAGAGQQQQATSGNLGGYNLSTYTPVARRVFQFL 220
Query: 211 RRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
R E +N G++++ I+ +L + ++ A + L L+Y+
Sbjct: 221 R--EAPQSNEGLNQHEIAAKLGIDTAEVARAGDDLLAGGLIYT 261
>gi|340521449|gb|EGR51683.1| hypothetical protein TRIREDRAFT_55902 [Trichoderma reesei QM6a]
Length = 275
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Query: 40 TLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
+L P+T+KQ+ L + + S + +DGA + IT VG V + ++ +DDGTG+
Sbjct: 42 SLRPLTIKQI--LDAEEPYSGADFKVDGAPITQITFVGQVRSINPQQTNLTIKVDDGTGQ 99
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
I+ +W + + ++RV+G LK+F +KR + A+ +RP+ DFNE+ H +E
Sbjct: 100 IDVKKWIDVDKQSDAEPGFEIDSHIRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHMLE 159
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHL-----KEYN--AISSNHYSFDEGKSIDQMVLDF 209
YV L+ TR G +N N + + YN A++ S G S +
Sbjct: 160 ATYVHLFYTRGAAGGANAGGDANGDSMFVDGGDGYNAGALAGQTASKLSGCSNKAKSMYM 219
Query: 210 LRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDE 256
+ +GVH N ++ +L L + +MEA + L L+Y +IDE
Sbjct: 220 YLKKSSGDGADGVHLNKLTAELGLGLRDVMEAADELMGQGLIYTTIDE 267
>gi|357117453|ref|XP_003560482.1| PREDICTED: uncharacterized protein LOC100837028 [Brachypodium
distachyon]
Length = 431
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%)
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
SIDG + + + V+G V ++ +E F +DDGTG+I RW +Q++ + I G+Y
Sbjct: 73 SIDGVETSNVRVLGRVLNIVSRETDVSFTLDDGTGKIALVRWITDQLDARDTAYIRDGVY 132
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS 180
VRV+ ++ FQ K+ S+RP+ +FNE+ H++EC++V + NTR++ P + +
Sbjct: 133 VRVHANVTGFQAKQQAFIRSIRPVTNFNEVVLHYIECMHVHMENTRIKMQGQLPPAVQTN 192
Query: 181 NHLKEYNAISSNHYSF 196
+ E + + F
Sbjct: 193 AYTHEPGGVREHQVHF 208
>gi|115397283|ref|XP_001214233.1| hypothetical protein ATEG_05055 [Aspergillus terreus NIH2624]
gi|114192424|gb|EAU34124.1| hypothetical protein ATEG_05055 [Aspergillus terreus NIH2624]
Length = 276
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 27/241 (11%)
Query: 37 NVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
N TL P+TVKQ L E+S IDGADV+++ +VG V ++ + + IDDGTG
Sbjct: 34 NNATLRPITVKQALDATQPYPEASHQIDGADVSSVCLVGQVRNISSQSTNVTYKIDDGTG 93
Query: 96 RIECSRW----AHEQMEFNE--------VNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
IE +W + ME +E +Q+ Y +++G L+ F K + A+S+RP
Sbjct: 94 EIEVKQWLDSTTADTMEMDEGKGPGAPGKDQVELNAYAKIFGKLRFFGTKLFVVAHSVRP 153
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ + NE+ H +E + V L+ TR G ++ + KS+
Sbjct: 154 LTNINELHCHLLEAVAVHLFFTR---GPPGGAGAAAGGAAGAGDSAMGGMDDYSANKSLP 210
Query: 204 QM------VLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-ID 255
M V + L+ P+ +N G+H +I+ +L+LPM + A + L +++S +D
Sbjct: 211 AMSAVARRVYNLLKTEPQ---SNEGLHAQLIAAKLSLPMPDVARAGDELLTAGVIFSTVD 267
Query: 256 E 256
E
Sbjct: 268 E 268
>gi|405120055|gb|AFR94826.1| hypothetical protein CNAG_01316 [Cryptococcus neoformans var.
grubii H99]
Length = 266
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Query: 39 RTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+T+ P+TVKQ+ E + ++ +IDG DV + +VG V +M + I DGTG I
Sbjct: 40 QTIRPVTVKQVLEAQQVHPDADFTIDGVDVAQVLLVGSVRNMSTTATNVSYEIGDGTGYI 99
Query: 98 ECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
+ W E + I + YV + G +K F KR ++A +RPI D NE+ H ++
Sbjct: 100 DARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSATHIRPITDGNEVQHHLLK 159
Query: 157 CIYVQLYNTRLRGGS-SNQPQMTNSNHLKEYNAIS----SNHYSFDEGKSIDQMVLDFLR 211
+YV L LRGG+ N P+ + +YNA + ++ ++ + + + +L+ +
Sbjct: 160 ALYVSLI---LRGGTPGNAPKAAGTR--DDYNAGATTGGTDQSAWSHLEPLQRRILEVMS 214
Query: 212 RPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS-IDEFHYK 260
E N++GVH I + LN + + AL+ L +N VYS +DE HY+
Sbjct: 215 S-EGQGNDDGVHVTHIIKFLNGVDENDFTVALDWLTDNGYVYSTLDESHYQ 264
>gi|53792832|dbj|BAD53865.1| putative replication protein A2 [Oryza sativa Japonica Group]
Length = 438
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 8 GAAAFAGGGFMPSQATTVPDP-----------SSSFSKNRNVR--TLLPMTVKQLSE--- 51
A+ F+G MPSQ + P P + S SK R+ R +P TV +S
Sbjct: 4 AASYFSGTALMPSQRSGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFA 63
Query: 52 ----LSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM 107
+ SIDG + + V+G V + ++ F +DD TG+I RW +Q
Sbjct: 64 AALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQS 123
Query: 108 EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRL 167
+ + + I +G+YV+V +L FQ K+ A S+RPI +FNE+ HF+EC++V L + +
Sbjct: 124 DTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ- 182
Query: 168 RGGSSNQPQMTNSNHLKEYNAISSN 192
S Q Q+ S EY + S+
Sbjct: 183 ---SKMQRQLPPSVQTNEYTHVPSS 204
>gi|367022396|ref|XP_003660483.1| hypothetical protein MYCTH_2124177 [Myceliophthora thermophila ATCC
42464]
gi|347007750|gb|AEO55238.1| hypothetical protein MYCTH_2124177 [Myceliophthora thermophila ATCC
42464]
Length = 370
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T+KQL + + + ++DG +T+VG V + + ++ +DDGTG I+
Sbjct: 135 TLRPVTIKQLIDCKEAYPGAELAVDGVPTTQVTLVGQVRSVAPQAINVVYRLDDGTGVID 194
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W + + + V Q + G YVRV+G L++F +KR ++A+ +R I DFNE+ H +E
Sbjct: 195 VKKWIDAE-KPDSVQQFAPGTYVRVFGRLQSFNNKRQVSAHYIRAIEDFNEVNYHLLEAT 253
Query: 159 YVQLYNTR-LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID-QMVLDFLRRPE-- 214
YV L T+ GG+ Q Q + + + D G S+ Q L R
Sbjct: 254 YVHLALTKGPAGGAGQQHQDDGGDSMFVDGGYGAAGGGGDGGGSVAMQARLGSCSRNAKT 313
Query: 215 ---FLAN---NNGVHRNVISQQLNLPMDKLMEALESLNENSLVYSIDE 256
+LAN +GVH N ++ L +M A E L L+Y+ +
Sbjct: 314 VFNYLANAPGTDGVHLNQVASGTGLSAKDIMAATEELLGQGLIYTTQD 361
>gi|407926600|gb|EKG19567.1| Nucleic acid binding OB-fold tRNA/helicase-type [Macrophomina
phaseolina MS6]
Length = 273
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 24/243 (9%)
Query: 31 SFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLI 90
S SK TL P+T+KQ+++ + ES +IDGA++ IT +G + ++ + F +
Sbjct: 36 SASKGYRKDTLRPVTLKQINDAVNTQESDFTIDGAEITQITFIGQIRNISQQTTNITFKL 95
Query: 91 DDGTGRIECSRW----AHEQMEFNEVNQ--ISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
DDGTG E W A +E + ++ + + Y RV+G LK++ +KR + A+ +RPI
Sbjct: 96 DDGTGIAEVKLWIDSDAPNPLEPADGSKPTLVENAYARVWGKLKSYGNKRHVIAHIIRPI 155
Query: 145 IDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG----- 199
DFNEI+ H +E V L+ TR S ++P + + Y + G
Sbjct: 156 TDFNEISYHLLEATVVHLHFTRGPLNSDSKPAANGGD-------VQMGGYGGNAGSVPAN 208
Query: 200 -KSIDQMVLDFLRR-PEFLANNNGVHRNVISQQLNLPMDKLMEAL-ESLNENSLVYSIDE 256
S VL+ LR P+ N G+H I+ + + M + +A E L E + ++D+
Sbjct: 209 ISSGAAKVLNVLRTAPQ---GNEGLHMQDIASRTGMDMADVAKAGDELLTEGRIYTTVDD 265
Query: 257 FHY 259
+
Sbjct: 266 TTW 268
>gi|71014541|ref|XP_758726.1| hypothetical protein UM02579.1 [Ustilago maydis 521]
gi|46098516|gb|EAK83749.1| hypothetical protein UM02579.1 [Ustilago maydis 521]
Length = 285
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 126/229 (55%), Gaps = 16/229 (6%)
Query: 40 TLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T++Q L+ + ++ +DGA++ +T V +V ++ + ++DGTG+IE
Sbjct: 47 TLRPVTIRQILNAEQPHPDAEFILDGAELGQLTFVAVVRNISRNATNVAYSVEDGTGQIE 106
Query: 99 CSRW-AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W + ++ ++I +YVRV G LK+FQ++RS+++ +RP+ID+NE+ H +E
Sbjct: 107 VRQWLDSSSDDSSKASEIRNNVYVRVLGTLKSFQNRRSISSGHMRPVIDYNEVMFHRLEA 166
Query: 158 IYVQLYNTR------LRGGSS----NQPQMTNSNHLKEYNAISSNHYS--FDEGKSIDQM 205
++ L TR L+G +S NQ SN + Y+ + + + Q
Sbjct: 167 VHAHLQATRGPTASALKGATSTALFNQAGGLESNDMNAYSGSKKQDVNDLYKNLGELPQQ 226
Query: 206 VLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS 253
++ + R E + +GVH ++I++ LN + ++ + A+E L+ + +Y+
Sbjct: 227 IMSIVTR-ESQNHPDGVHVSLIARLLNGVDVNDVKSAVEDLSSDGYLYT 274
>gi|218198807|gb|EEC81234.1| hypothetical protein OsI_24288 [Oryza sativa Indica Group]
Length = 407
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 8 GAAAFAGGGFMPSQATTVPDP-----------SSSFSKNRNVR--TLLPMTVKQLSE--- 51
A+ F+G MPSQ + P P + S SK R+ R +P TV +S
Sbjct: 4 AASYFSGTALMPSQRSGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFA 63
Query: 52 ----LSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM 107
+ SIDG + + V+G V + ++ F +DD TG+I RW +Q
Sbjct: 64 AALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQS 123
Query: 108 EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRL 167
+ + + I +G+YV+V +L FQ K+ A S+RPI +FNE+ HF+EC++V L + +
Sbjct: 124 DTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ- 182
Query: 168 RGGSSNQPQMTNSNHLKEYNAISSN 192
S Q Q+ S EY + S+
Sbjct: 183 ---SKMQRQLPPSVQTNEYTHVPSS 204
>gi|134110644|ref|XP_776149.1| hypothetical protein CNBD1960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258817|gb|EAL21502.1| hypothetical protein CNBD1960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 266
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Query: 39 RTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+T+ P+TVKQ+ + + ++ +IDG DV + ++G V +M + I DGTG I
Sbjct: 40 QTIRPVTVKQILDAQQVHPDADFTIDGVDVAQVLLIGSVRNMSTTATNISYEIGDGTGYI 99
Query: 98 ECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
+ W E + I + YV + G +K F KR ++A +RPI D NE+ H ++
Sbjct: 100 DARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSATHIRPITDGNEVQHHLLK 159
Query: 157 CIYVQLYNTRLRGGS-SNQPQMTNSNHLKEYNA----ISSNHYSFDEGKSIDQMVLDFLR 211
+YV L LRGG+ N P+ ++ +YNA +++ ++ + + + +L+ L
Sbjct: 160 ALYVSLI---LRGGTPGNAPKAAGTH--DDYNAGATTGATDQSAWSHLEPLQRRILEVLS 214
Query: 212 RPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS-IDEFHYK 260
E N++GVH I + LN + AL+ L +N VYS +DE HY+
Sbjct: 215 S-EGQGNDDGVHVTHIIKFLNGADENDFTVALDWLTDNGYVYSTLDESHYQ 264
>gi|449547019|gb|EMD37987.1| hypothetical protein CERSUDRAFT_48111, partial [Ceriporiopsis
subvermispora B]
Length = 235
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 17/238 (7%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQL + + ++ ++ I+G ++ +TVV V + + ++ +DDGTGR+E
Sbjct: 1 SLRPVTIKQLLDATQAHSDAEWQINGQEIGAVTVVAHVLTIHAQTTNCVYWLDDGTGRME 60
Query: 99 CSRWA-HEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W+ ++ +++ I++G YVRV G K F K+ +NA +LRP+ D NEI H +E
Sbjct: 61 ARQWSPSDEDGGDKLRGITEGTYVRVMGTPKIFGQKKYINATALRPVTDPNEIQFHLLET 120
Query: 158 IYVQLYNTRLRGGSSNQPQM-----TNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR 212
+ V + RG S +P+ N L +A S +S + D RR
Sbjct: 121 MMV--WKILERGPVSEKPRANVNAYANGAALGTASAYSKQTHSAPSNPQWAHLP-DLQRR 177
Query: 213 -PEFLANNN----GVH-RNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAV 263
E++A G+H RN+ + + AL+ L + +YS ID+ HY +V
Sbjct: 178 IVEYMAAQTAIPEGIHARNIAASIPGGNATAIAGALDDLMDTGYIYSTIDDSHYALSV 235
>gi|213404342|ref|XP_002172943.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
gi|212000990|gb|EEB06650.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
Length = 274
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 41 LLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
L P+T+KQ+ + + + ++ IDG +V IT+VG++ ++ + + ++DGTG IE
Sbjct: 48 LRPVTIKQILDATQVHADADFKIDGVEVGQITIVGVLRNIHAQTTNTTYQVEDGTGLIEV 107
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
W H ++ +S YVRVYG +K F +K + + +R I D NE+ H +E I
Sbjct: 108 RHWEH----VEGMSDLSTDTYVRVYGSIKVFSEKIYIASQHIRTIKDPNEVHFHILETIA 163
Query: 160 VQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDE----GKSIDQMVLDFLRRPEF 215
V LY TR S +++ A + Y + G S++Q + ++ P
Sbjct: 164 VHLYFTRKPPAGS----------IEQAGAAGTTSYGANGTGAVGDSLEQKLAEYSLTPAQ 213
Query: 216 LA----------NNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSAV 263
LA N GVH ++Q + +D + E L + ++Y +IDE H+KS +
Sbjct: 214 LAVMHAIHNAPETNEGVHLRQLTQAVGPGID-VNAVTEFLMQEGIIYTTIDENHFKSVL 271
>gi|408396398|gb|EKJ75557.1| hypothetical protein FPSE_04332 [Fusarium pseudograminearum CS3096]
Length = 292
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 44/240 (18%)
Query: 39 RTLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+L P+T+KQ+ L + + + + IDG+ V IT VG V +Q + IDDGTG
Sbjct: 60 ESLRPVTIKQI--LDAEEAYAGADFKIDGSPVTQITFVGQVRSVQPQPTNITLKIDDGTG 117
Query: 96 RIECSRWAHEQMEFNEVNQISKGM----YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEIT 151
+IE +W ++ ++ + G +VR++G LK+F +KR + A+ +RP+ DFNE+
Sbjct: 118 QIEVKKW----IDVDKADDSEAGFELDSHVRIWGRLKSFNNKRHVGAHVIRPVADFNEVN 173
Query: 152 SHFVECIYVQLYNTR-----------------LRGGSSNQPQMTNSNHLKEYNAISSNHY 194
H +E YV LY T+ + GG N N+N +H
Sbjct: 174 YHMLEATYVHLYFTKGPLGGQGGGANGDDGMFVDGGGYNDNAGGNTN----------SHS 223
Query: 195 SFDEGKSIDQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+ + + +F+ +P N GVH N+I+ + + + A + L L+Y+
Sbjct: 224 KLAGCSPLAKKMFNFMSDQP---GGNEGVHVNIITSSTGMSVRDALTASDELLGQGLIYT 280
>gi|409082265|gb|EKM82623.1| hypothetical protein AGABI1DRAFT_111214 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 275
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 31/253 (12%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
P S ++ +L P+ Q + ++++ +DG +V +T+VG + M +
Sbjct: 29 PGSGQQRSEAASSLRPINSFQYRKAEQPHNDAPWVLDGFEVGLVTMVGHLVSMHLQTTNH 88
Query: 87 IFLIDDGTGRIECSRW----AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
++ ++DG GR+E W + + E + I +G+YVR+ G LK+F K+ +NA +R
Sbjct: 89 VYTLEDGLGRVEARHWVGSSTNAEQEMEKWGDIKEGIYVRLTGFLKSFGGKKYINATYMR 148
Query: 143 PIIDFNEITSHFVECIYVQLYNTRLRGGSSN--QPQMTNSNHLKEYNAISSNHYSFDEGK 200
P+ DF+EI HF+ECI V L T RG N Q N+ +K SS+ Y D
Sbjct: 149 PVTDFSEIDFHFLECITVTL--TLERGPHYNFGTGQQQNATGVK-----SSSAYQLDNSM 201
Query: 201 SI----------DQMVLDFLRRPEFLANNNGVHRNVISQQLNLP---MDKLMEALESLNE 247
I +Q ++ +L + +GVH I++ + DKL A++SL +
Sbjct: 202 DIRDEYSHLPPLEQQIIRYLISQD---QKDGVHVANIARAIGKSDEDADKLSTAMDSLMD 258
Query: 248 NSLVY-SIDEFHY 259
N ++ +ID+ H+
Sbjct: 259 NGHLFNTIDDCHF 271
>gi|156049217|ref|XP_001590575.1| hypothetical protein SS1G_08315 [Sclerotinia sclerotiorum 1980]
gi|154692714|gb|EDN92452.1| hypothetical protein SS1G_08315 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 287
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 25/243 (10%)
Query: 26 PDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P + ++ K+ TL P+T+KQ L + ++ IDG++V ++ +G V + +
Sbjct: 43 PGGTKTYGKD----TLRPVTIKQILDAEQPHPDADFKIDGSEVTQLSFIGQVHSISTQAT 98
Query: 85 QFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ +DDGTG IE +W E + + G Y+ V+G LK+F DKR + A+ +RP
Sbjct: 99 NNTYKVDDGTGLIEVKQWIDNDAEPENAKSVPQEGQYIHVWGRLKSFHDKRHVGAHIIRP 158
Query: 144 IIDFNEITSHFVECIYVQLYNTR----LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG 199
+ D NE+T H +E V L+ TR G + + + + + Y N+ S G
Sbjct: 159 VTDMNEVTFHGLEATLVHLHFTRGPIPTAGAGAVKTESGDGMFVDSYGG---NNVSTATG 215
Query: 200 KSI--------DQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
+ + V + L+ P+ NN G++ NVI+ +L +P+ ++ + + L
Sbjct: 216 GRVLAAHVTPNSRAVFNLLQLEPQ---NNEGLNVNVIATKLGMPVAEVYKCGDQLLSEGC 272
Query: 251 VYS 253
+Y+
Sbjct: 273 IYT 275
>gi|322706765|gb|EFY98345.1| putative replication factor-a protein [Metarhizium anisopliae ARSEF
23]
Length = 276
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 17/227 (7%)
Query: 40 TLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
+L P+TVKQ+ L +++ S + ID + IT VG V ++ + IDDGTG+
Sbjct: 42 SLRPVTVKQI--LEADEAFSGADFKIDNTAITQITFVGQVRNINPQPTNVTLKIDDGTGQ 99
Query: 97 IECSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
IE +W ++ + +Q YVRV+G LK+F +KR + A+ +RP+ DFNE+ H +
Sbjct: 100 IEVKKWIDADKADDGNADQYELDSYVRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHLL 159
Query: 156 ECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQM---------V 206
E YV LY TR G + + A N G+ + ++ +
Sbjct: 160 EATYVHLYLTRGPLGQDGAANGGGESMFVDGGAYGGNANGGGSGQMLSKVSGCGPLAKRM 219
Query: 207 LDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+F+ + N GVH NVIS + + ++ A + L L+Y+
Sbjct: 220 FNFMNGTPGM--NEGVHLNVISSSTGMSVRDVLAAADELLGQGLIYT 264
>gi|358393792|gb|EHK43193.1| hypothetical protein TRIATDRAFT_320493 [Trichoderma atroviride IMI
206040]
Length = 324
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 18/225 (8%)
Query: 40 TLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
+L P+T+KQ+ L + + S + +DG + IT VG V + ++ +DDGTG+
Sbjct: 95 SLRPLTIKQI--LDAEEPYSGAEFKVDGTPITQITFVGQVRSINPQQTNLTIRVDDGTGQ 152
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
I+ +W + + ++RV+G LK+F +KR + A+ +RP+ DFNE+ H +E
Sbjct: 153 IDVKKWIDADKQGDAEPGFEIDSHIRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHLLE 212
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHL-----KEYNAISSNHY---SFDEGKSIDQMVLD 208
YV L NTR G + N + + +NA + ++ + V
Sbjct: 213 ATYVHLVNTR---GPAGAGANANGDSMFVDGGDGFNAGAGGAQLPSKLSGCSTVAKRVYT 269
Query: 209 FLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+L + N+G+H + I+ L M +++ A + L L+Y+
Sbjct: 270 YLN--DTPGGNDGMHLSNITASTGLGMREVITAADELLGQGLIYT 312
>gi|388853617|emb|CCF52789.1| related to RFA2-DNA replication factor A, 36 kDa subunit [Ustilago
hordei]
Length = 283
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
Query: 30 SSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIF 88
S SK + TL P+T++Q L+ + ++ ++DGA++ +T V +V ++ +
Sbjct: 37 SPSSKRQGNNTLRPVTIRQILNAEHPHPDAEFTLDGAELGQLTFVAVVRNISKNATNVAY 96
Query: 89 LIDDGTGRIECSRWAHEQMEFNE-VNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
++DGTG+IE +W + N+ + I + +YVRV G +K+FQ++RS++A +R ++D+
Sbjct: 97 SVEDGTGQIEVRQWLESSGDDNQKASDIRQNVYVRVLGTVKSFQNRRSISAGHMRVVVDY 156
Query: 148 NEITSHFVECIYVQLYNTR-----LRGGSSNQPQMTNSNHLKEYNAI--SSNHYSFDEGK 200
NE+ H +E ++ L TR G +NQ + NA S+N D+ K
Sbjct: 157 NEVLFHRLEAVHSHLQLTRGVKPSQANGGNNQGLYRGQEQTSDINAYSGSNNQSVLDQYK 216
Query: 201 SIDQMVLDFLRRPEFLANN--NGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS 253
S+D + + A N +GVH +I++ L + + ++ A+E L+ +Y+
Sbjct: 217 SLDPLPRQIMGIVTSEAENHTDGVHVALIARMLKGVDVSEVKTAVEELSSEGYLYT 272
>gi|212539830|ref|XP_002150070.1| possible replication factor-a protein [Talaromyces marneffei ATCC
18224]
gi|210067369|gb|EEA21461.1| possible replication factor-a protein [Talaromyces marneffei ATCC
18224]
Length = 292
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 37/272 (13%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGI 75
FMP + S + + TL P+T+KQ+ E + ++ E+ IDGAD+ ++ +G
Sbjct: 24 FMPGEVN-----SPAGGRQGENPTLRPVTIKQILEATQAHPEAPFQIDGADIGSVYCIGQ 78
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAH--------------EQMEFNEVNQISKGMYV 121
V ++ + + +DDGTG IE +W + ++ + ++ +V
Sbjct: 79 VRNISTQSTNITYKLDDGTGEIEAKQWVDSTTARIEDDMDVDGQGVKHSTRKKVELNGFV 138
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G +K F +KR L A+++RP+ D NEI HF+E + L+ + G + TN
Sbjct: 139 KVFGKVKVFGNKRFLGAHNVRPVSDVNEIHVHFLEATAIHLF---FKHGPPQKGTDTNGA 195
Query: 182 -HLKEYNAISSNHYSFDE--------GKSIDQMVLDFLRRPEFLAN----NNGVHRNVIS 228
+ ++ D+ G+ + M R L N N G+H IS
Sbjct: 196 VSGSGFGGNTAGGMKGDDDYSGAAAGGRPLPPMSASARRVYNLLKNEPQSNEGLHMQNIS 255
Query: 229 QQLNLPMDKLMEALESLNENSLVYS-IDEFHY 259
+L LP ++++A + L L++S +DE+ +
Sbjct: 256 AKLGLPSTEVVKAGDELLSAGLIFSTMDEYTW 287
>gi|1403534|emb|CAA67116.1| p32-subunit of replication protein A [Rattus norvegicus]
Length = 266
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 135/265 (50%), Gaps = 16/265 (6%)
Query: 6 FDGAAAFAGGGFMPSQAT-TVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASID 63
F ++ A GG+ S P PS + K+R + ++P T+ QL + DE I
Sbjct: 5 FSSSSYGAAGGYTQSPGGFGSPTPSQAEKKSRARAQHIVPCTISQLLSATLTDEV-FKIG 63
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVR 122
+++ +T+VGI+ + ++ IDD T ++ +W E + YV+
Sbjct: 64 DVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYVK 123
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS-NQPQMTNSN 181
V GHL++FQ+K+SL A+ + P+ D NE T+H +E + L ++ +S +P M+N
Sbjct: 124 VAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQASVGRPSMSNPG 183
Query: 182 HLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDK 237
+ E S N++ G ++ Q VL+ ++ RPE L +++ SQ ++P+
Sbjct: 184 -MGEPGNFSGNNFMPANGLTVVQNQVLNLIKACPRPEGLN-----FQDLRSQLQHMPVAS 237
Query: 238 LMEALESL-NENSLVYSIDEFHYKS 261
+ +A++ L NE + ++D+ H+KS
Sbjct: 238 IKQAVDFLCNEGHIYSTVDDDHFKS 262
>gi|378726363|gb|EHY52822.1| replication factor A2 [Exophiala dermatitidis NIH/UT8656]
Length = 284
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 2 YSGEFDGAAAFAGGGFMPSQATTVPDPS-SSFSKNRNVRTLLPMTVKQLSELSS-NDESS 59
YS + A GGGF+ + + P F K T+ P+T+KQ+ + + ++
Sbjct: 10 YSTSYGANRAADGGGFVAGEPQSSPAAGRGGFGK----ETIRPVTIKQIKDAQQPHPDAD 65
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW----AHEQMEFNEVNQI 115
++DG + +T VG + + + + IDDGTG E +W A M ++++ I
Sbjct: 66 FTVDGEALGQVTFVGQIRSINTQPTNITYTIDDGTGIAEVKQWIDSDAAMNMNADKMDGI 125
Query: 116 SKG-------MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
G Y RV+G LKAF +KR + A+ +RPI D+NEI H +E V L+ TR
Sbjct: 126 ESGKPRLVEDAYCRVWGRLKAFHNKRHIGAHIIRPITDYNEINYHLLEATAVHLFFTR 183
>gi|51036584|ref|NP_067593.1| replication protein A 32 kDa subunit [Rattus norvegicus]
gi|62906848|sp|Q63528.2|RFA2_RAT RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2
gi|50925757|gb|AAH79180.1| Replication protein A2 [Rattus norvegicus]
gi|149024153|gb|EDL80650.1| replication protein A2 [Rattus norvegicus]
Length = 270
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 132/258 (51%), Gaps = 16/258 (6%)
Query: 13 AGGGFMPSQAT-TVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTI 70
A GG+ S P PS + K+R + ++P T+ QL + DE I +++ +
Sbjct: 16 AAGGYTQSPGGFGSPTPSQAEKKSRARAQHIVPCTISQLLSATLTDEV-FKIGDVEISQV 74
Query: 71 TVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
T+VGI+ + ++ IDD T ++ +W E + YV+V GHL++
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRS 134
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS-NQPQMTNSNHLKEYNA 188
FQ+K+SL A+ + P+ D NE T+H +E + L ++ +S +P M+N + E
Sbjct: 135 FQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQASVGRPSMSNPG-MGEPGN 193
Query: 189 ISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALES 244
S N++ G ++ Q VL+ ++ RPE L +++ SQ ++P+ + +A++
Sbjct: 194 FSGNNFMPANGLTVVQNQVLNLIKACPRPEGLN-----FQDLRSQLQHMPVASIKQAVDF 248
Query: 245 L-NENSLVYSIDEFHYKS 261
L NE + ++D+ H+KS
Sbjct: 249 LCNEGHIYSTVDDDHFKS 266
>gi|451999036|gb|EMD91499.1| hypothetical protein COCHEDRAFT_1136108 [Cochliobolus
heterostrophus C5]
Length = 272
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 40 TLLPMTVKQL----SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
++ P+T+KQ+ E SND + IDG ++ +T+VG + ++ ++ + +DDGTG
Sbjct: 44 SIRPVTIKQILDAQGEAGSND--TFKIDGTVISQLTIVGQIRNISNQTTNTTYRLDDGTG 101
Query: 96 RIECSRWAH-EQMEFNEVNQ--ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITS 152
IE +W + E ++ + + + + +G Y R +G L++F D++S+ A +RPI D NEI+
Sbjct: 102 SIEVKQWVNPETVDHSNLAKAKLVEGAYCRAWGKLRSFNDRKSVGATIIRPIEDMNEISY 161
Query: 153 HFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQM---VLDF 209
H +E + LY TR G +Q +N + AI Y E Q V F
Sbjct: 162 HLLEATAIHLYFTR---GPPDQAGGATANGAGKQQAIEGG-YGGAELAGYSQAAKRVFKF 217
Query: 210 LRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
L E +N GV++ I+ +L + + +A E L L+Y+
Sbjct: 218 LGEVE--QSNEGVNQYEIASKLGIDAADVAKAGEDLLAGGLIYT 259
>gi|330947856|ref|XP_003306986.1| hypothetical protein PTT_20305 [Pyrenophora teres f. teres 0-1]
gi|311315220|gb|EFQ84924.1| hypothetical protein PTT_20305 [Pyrenophora teres f. teres 0-1]
Length = 288
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 40 TLLPMTVKQLSELSSNDESSA----SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+L P+T+KQ+ E SS+ IDGA ++ +T+VG + ++ ++ + +DDGTG
Sbjct: 48 SLRPVTIKQILEAQGEAGSSSDQILKIDGAVLSQLTLVGQIRNISNQTTNNTYRLDDGTG 107
Query: 96 RIECSRW----AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEIT 151
IE W + EQ + ++ +G Y R +G LK F D+RS+ A +RPI D NEI+
Sbjct: 108 SIEVKVWVDSDSSEQPNPTKA-KLVEGAYCRAWGKLKIFNDRRSVGATVIRPIEDMNEIS 166
Query: 152 SHFVECIYVQLYNTR-------LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGK--SI 202
H +E V L+ TR G ++N ++ A N+ +D +
Sbjct: 167 FHLLEATAVHLHFTRGPPGGAQTAGANANGAVGQQQQQQQQQQAAGGNYGGYDLTAYGQV 226
Query: 203 DQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+ V +LR E +N G++++ I+ +L + + +A + L L+Y+
Sbjct: 227 AKKVFQYLR--EAPQSNEGLNQHEIAAKLGIDTADVAKAGDELLSGGLIYT 275
>gi|222636141|gb|EEE66273.1| hypothetical protein OsJ_22466 [Oryza sativa Japonica Group]
Length = 439
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSS------------SFSKNRNVR--TLLPMTVKQLSE-- 51
A+ F+G MPSQ + P S S SK R+ R +P TV +S
Sbjct: 4 AASYFSGTALMPSQRSAGPRARSTPAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSF 63
Query: 52 -----LSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ 106
+ SIDG + + V+G V + ++ F +DD TG+I RW +Q
Sbjct: 64 AAALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQ 123
Query: 107 MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
+ + + I +G+YV+V +L FQ K+ A S+RPI +FNE+ HF+EC++V L + +
Sbjct: 124 SDTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ 183
Query: 167 LRGGSSNQPQMTNSNHLKEYNAISSN 192
S Q Q+ S EY + S+
Sbjct: 184 ----SKMQRQLPPSVQTNEYTHVPSS 205
>gi|46136417|ref|XP_389900.1| hypothetical protein FG09724.1 [Gibberella zeae PH-1]
Length = 275
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 44/240 (18%)
Query: 39 RTLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+L P+T+KQ+ L + + + + IDG+ V IT +G V +Q + IDDGTG
Sbjct: 43 ESLRPVTIKQI--LDAEEAYAGADFKIDGSPVTQITFIGQVRSVQPQPTNITLKIDDGTG 100
Query: 96 RIECSRWAHEQMEFNEVNQISKGM----YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEIT 151
+IE +W ++ ++ + G ++R++G LK+F +KR + A+ +RP+ DFNE+
Sbjct: 101 QIEVKKW----IDVDKADDSEAGFELDSHIRIWGRLKSFNNKRHVGAHVIRPVSDFNEVN 156
Query: 152 SHFVECIYVQLYNTR-----------------LRGGSSNQPQMTNSNHLKEYNAISSNHY 194
H +E YV LY T+ + GG N N+N +H
Sbjct: 157 YHMLEATYVHLYFTKGPLGGQGGGANGDDGMFVDGGGYNDNAGGNTN----------SHS 206
Query: 195 SFDEGKSIDQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+ + + F+ +P N GVH N+I+ + + + A + L L+Y+
Sbjct: 207 KLAGCSPLAKKMFKFMSDQP---GGNEGVHVNIITSSTGMSVRDALTASDELLGQGLIYT 263
>gi|145240461|ref|XP_001392877.1| possible replication factor-a protein [Aspergillus niger CBS
513.88]
gi|134077395|emb|CAK40009.1| unnamed protein product [Aspergillus niger]
Length = 288
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 31/265 (11%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGI 75
FMP + P S N TL P+T+KQ L + E+ ID A++++I +G
Sbjct: 22 FMPGEMNNSPSGGKSDYTNS---TLRPITIKQALDAVQPYPEAPYQIDSAEISSICFIGQ 78
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRW----AHEQMEFNEVN-----------QISKGMY 120
V ++ + + IDDGTG IE +W + M+ +++N ++ Y
Sbjct: 79 VRNISSQSTNVTYKIDDGTGEIEAKQWIDSMTADSMDTDDINNTKAATGRRDGKVELNGY 138
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS 180
+V+G LK+F +KR + A+ +RP+ +E+ H +E V L+ TR G
Sbjct: 139 AKVFGKLKSFGNKRFVGAHCVRPVKSLDEVHCHLLEASAVHLFFTRGPPGGGASGAGGVG 198
Query: 181 NHLKEYN-AISSNHYSFDEGKSIDQM------VLDFLR-RPEFLANNNGVHRNVISQQLN 232
+ + + A+ + GK++ M V LR P+ +N G+H +I+ +L+
Sbjct: 199 DVGAKGDAAMGGTGDDYGAGKNLPAMSPVAKRVYQLLRTEPQ---SNEGLHAQLIAAKLS 255
Query: 233 LPMDKLMEALESLNENSLVYS-IDE 256
LPM + A + L +++S +DE
Sbjct: 256 LPMPDVARAGDELLTAGVIFSTVDE 280
>gi|430811574|emb|CCJ30960.1| unnamed protein product [Pneumocystis jirovecii]
Length = 906
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 41/281 (14%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGAD 66
G F GG + SQ V + + S K + TL P+T+KQ+ E S + ++ IDG +
Sbjct: 28 GDGGFLGGNY-GSQG--VGELNQSSVKRSSGNTLRPVTIKQILEASQQHPDAEFKIDGVE 84
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ--MEFN--EVNQISKGMYVR 122
+ ++ V +V ++ + + ++DGTG IE +W + M+ N + I YVR
Sbjct: 85 IGQLSFVAVVRNISIQSTNITYRMEDGTGLIEVKQWLEMEAIMDDNPKKNTDIVPDTYVR 144
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
V G LKAF +KR + A+ +R I D NE+ HF+E I + LY TR + N
Sbjct: 145 VIGQLKAFNNKRHIGAHHIRLITDLNEVQYHFLEAIAIHLYFTR--------GPLQNGVF 196
Query: 183 LKEYNAISSN--HYSFDEGKSID-----QMVLD----FLRR--------PEFLANNNGVH 223
K + ++ N HY F + S+ Q+ L +L++ P+ N GV+
Sbjct: 197 SKNHTSVDGNMSHYDFQDSISMKGALNAQIALHNLSPYLQKVMAAVHAAPD---TNEGVN 253
Query: 224 RNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSAV 263
+ +S+ + + +A+E L + L+Y +ID+ H KS +
Sbjct: 254 IHQLSKAIG--GGNIEQAIEELTSDGLLYTTIDDEHVKSTI 292
>gi|443894537|dbj|GAC71885.1| hypothetical protein PANT_5d00116 [Pseudozyma antarctica T-34]
Length = 249
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 125/227 (55%), Gaps = 15/227 (6%)
Query: 40 TLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T++QL + + ++ +DGA++ +T V +V ++ + ++DGTG+IE
Sbjct: 14 TLRPVTIRQLINAEQPHPDADFIVDGAELGQLTFVAVVRNISRNATNIAYSVEDGTGQIE 73
Query: 99 CSRWAHEQME-FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W + + ++I + +YVRV G LK+FQ +RSL+A +R ++D+NE+ H +E
Sbjct: 74 VRQWLDSSSDDTQKASEIRQNVYVRVLGTLKSFQGRRSLSAGHMRAVVDYNEVLFHRLEA 133
Query: 158 IYVQLYNTR-LRGGSSNQPQMTNS------NHLKEYNAISSNHYSFDEGKSIDQM---VL 207
I+ L TR G QP + N + Y+ S+ D+ +S+D++ ++
Sbjct: 134 IHSHLQITRGTHGAPGTQPDVGQGLIRGQPNDIGAYSG-SNAQNVLDQYQSLDELPRRIM 192
Query: 208 DFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS 253
+ + E +++GVH + I++ L N+ + ++ A+E L+ +Y+
Sbjct: 193 GIVTQ-EAENHHDGVHVSHIARMLRNVDIAQVRSAVEDLSSEGYLYT 238
>gi|110625961|ref|NP_035414.3| replication protein A 32 kDa subunit [Mus musculus]
gi|74146914|dbj|BAE41408.1| unnamed protein product [Mus musculus]
gi|74219891|dbj|BAE40529.1| unnamed protein product [Mus musculus]
gi|148698143|gb|EDL30090.1| replication protein A2, isoform CRA_a [Mus musculus]
Length = 270
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 136/269 (50%), Gaps = 23/269 (8%)
Query: 3 SGEFDGAAAF--AGGGFMPSQATTVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESS 59
S + GA + + GGF P PS + K+R + ++P T+ QL + DE
Sbjct: 11 SSTYGGAGGYTQSPGGF------GSPTPSQAEKKSRVRAQHIVPCTISQLLSATLTDEV- 63
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKG 118
I +++ +T+VGI+ + ++ IDD T ++ +W E +
Sbjct: 64 FRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVVPPE 123
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG-GSSNQPQM 177
YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + + ++ S+ +P M
Sbjct: 124 TYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKPNSQASAGRPSM 183
Query: 178 TNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNL 233
+N + E S N++ G ++ Q VL+ ++ RPE L +++ SQ ++
Sbjct: 184 SNPG-MSEPGNFSGNNFMPANGLTVVQNQVLNLIKACPRPEGLN-----FQDLRSQLQHM 237
Query: 234 PMDKLMEALESL-NENSLVYSIDEFHYKS 261
P+ + +A++ L NE + ++D+ H+KS
Sbjct: 238 PVPSIKQAVDFLCNEGHIYSTVDDDHFKS 266
>gi|409045863|gb|EKM55343.1| hypothetical protein PHACADRAFT_173451 [Phanerochaete carnosa
HHB-10118-sp]
Length = 269
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITV 72
GGGFM S PSS+ + + L P+TVKQL S + ++ ID ++ ITV
Sbjct: 14 GGGFMASPG--FDSPSSAVRRQNSQHALRPVTVKQLLSASQVHADAEFRIDDMELGHITV 71
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQD 132
VG V ++ + + +DDGTGR E W ++ + I + Y+RV G LK+F
Sbjct: 72 VGQVVQVKSQTTNSTYTLDDGTGRYEARHW-NDANAGEDDKGIKENTYIRVMGTLKSFGG 130
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP------QMTNSNHLKEY 186
+ +NA +RP D +E H +E + V L R S+Q Q +N Y
Sbjct: 131 RNYINATHIRPCKDPHEPYYHTLEAMAVTLMFQRGPPSGSDQQNGHMLVQKAGTNGASAY 190
Query: 187 NAISSNHYSFDEGKSIDQM---VLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALE 243
A +S + + D+ + ++ +++F+ + ++ +G+H + I++ + + AL+
Sbjct: 191 TAQASKNGAHDQFAFLPELQRKIVNFILSQQ--SHTDGIHVSAIARAVGGDAHAISSALD 248
Query: 244 SLNENSLVYSI-DEFHYKSAV 263
L + VY+ DE H+ +V
Sbjct: 249 QLMDEGHVYTTCDESHFDVSV 269
>gi|13435424|gb|AAH04578.1| Replication protein A2 [Mus musculus]
Length = 270
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 136/269 (50%), Gaps = 23/269 (8%)
Query: 3 SGEFDGAAAF--AGGGFMPSQATTVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESS 59
S + GA + + GGF P PS + K+R + ++P T+ QL + DE
Sbjct: 11 SSTYGGAGGYTQSPGGF------GSPTPSQAEKKSRVRAQHIVPCTISQLLSATLTDEV- 63
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKG 118
I +++ +T+VGI+ + ++ IDD T ++ +W E +
Sbjct: 64 FRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVVPPE 123
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG-GSSNQPQM 177
YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + + ++ S+ +P M
Sbjct: 124 TYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKSNSQASAGRPSM 183
Query: 178 TNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNL 233
+N + E S N++ G ++ Q VL+ ++ RPE L +++ SQ ++
Sbjct: 184 SNPG-MSEPGNFSGNNFMPANGLTVVQNQVLNLIKACPRPEGLN-----FQDLRSQLQHM 237
Query: 234 PMDKLMEALESL-NENSLVYSIDEFHYKS 261
P+ + +A++ L NE + ++D+ H+KS
Sbjct: 238 PVPSIKQAVDFLCNEGHIYSTVDDDHFKS 266
>gi|2498846|sp|Q62193.1|RFA2_MOUSE RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2; AltName: Full=Replication protein A 34 kDa
subunit; Short=RP-A p34
gi|220584|dbj|BAA00693.1| 30-kDa subunit of replication protein A [Mus musculus]
Length = 270
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PTPSQAEKKSRVRAQHIVPCTISQLLSATLTDEV-FRIGDVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAPPMDVRQWVDTDDASGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIIP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRG-GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
+ D NE T+H +E + + ++ S+ +P M+N + +N +N + +
Sbjct: 149 LEDMNEFTAHILEVVNSHMMLSKPNSQASAGRPSMSNPGMSESFNFSGNNFMPANRLTVV 208
Query: 203 DQMVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEFH 258
VL+ ++ RPE L +++ SQ ++P+ + +A++ L NE + ++D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|21627816|emb|CAD37148.1| possible replication factor-a protein [Aspergillus fumigatus]
Length = 274
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 17/250 (6%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGI 75
FMP + + P+ N N TL P+TVKQ + S E++ IDGAD ++ +G
Sbjct: 24 FMPGEMNS---PAGGKGDNNNA-TLRPITVKQALDASQPYPEAAFQIDGADAASVCFIGQ 79
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM-EFNEVNQISKGMYV-RVYGHLKAFQDK 133
V ++ + + IDDGTG IE +W Q + E + G +V+G +K+F +K
Sbjct: 80 VRNISSQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVFGKIKSFGNK 139
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNH 193
R + A+ +RP + NE+ H +E + L+ TR G + + + +N
Sbjct: 140 RYVGAHCVRPTTNLNEVHCHLLEAAAIHLFFTRGPPGGGAAGGASGAGANADAAMGGAND 199
Query: 194 YS-----FDEGKSIDQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNE 247
Y + V + L+ P+ +N G+H +I+ +LNLPM + A E L
Sbjct: 200 YGTGNSNLPAMSPAARRVYNLLKTEPQ---SNEGLHAQLIAAKLNLPMPDVARAGEELLT 256
Query: 248 NSLVYS-IDE 256
+++S +DE
Sbjct: 257 AGVIFSTVDE 266
>gi|296414341|ref|XP_002836860.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632701|emb|CAZ81051.1| unnamed protein product [Tuber melanosporum]
Length = 348
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 24/238 (10%)
Query: 40 TLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T+KQ+ E + + E+ ID ++ +T+V + + ++ + +DDGTG +E
Sbjct: 108 TLRPVTIKQVLEATQPHPEAEFKIDDVELTQLTLVAQIRAVSEQATNHTYKMDDGTGTLE 167
Query: 99 CSRWAHEQMEFNEVNQ-ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W + +Q + YVR+ G LKAF KR L A+ +RPI DFNEI H +E
Sbjct: 168 VKQWVEATAVPDGPSQKLQPNQYVRILGTLKAFGGKRHLGAHHIRPITDFNEIHYHLLEA 227
Query: 158 IYVQLYNTRLRGGSSNQPQMTN---------------SNHLKEYNAISSNHYSFDEGKSI 202
+ L+ T RG Q T S +Y
Sbjct: 228 TAIHLHLT--RGPPEQFGQTTGVMGHQMHDQGRDVAMSGMGAAVRGGGGAYYCPPNASPH 285
Query: 203 DQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFH 258
+ +LD +R +P+ + +G H N I+Q L + + +A+ L E + Y +ID+ H
Sbjct: 286 CRRILDVVRSKPQ---HTDGTHVNTIAQMCGLSLTDVEKAIYELTEAGIAYTTIDDSH 340
>gi|302838187|ref|XP_002950652.1| hypothetical protein VOLCADRAFT_117616 [Volvox carteri f.
nagariensis]
gi|300264201|gb|EFJ48398.1| hypothetical protein VOLCADRAFT_117616 [Volvox carteri f.
nagariensis]
Length = 838
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVR-TLLPMTVKQL-SELSSNDES 58
++ + D A G S ++ + S RN +L T++ L E+ + D+
Sbjct: 85 VFGKDGDAQQRHAVGTLSASDVISLSTVACGLSTGRNQHNSLRAFTIRHLLKEIVNADDE 144
Query: 59 SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI--S 116
DG D++T+TVVG V Q+ + I + DGT IE W + M+ ++
Sbjct: 145 RYMADGHDISTVTVVGKVTAYQEGPTRVILQVYDGTASIEVCSWV-DDMDAQAQKRVDWQ 203
Query: 117 KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
G YVRVYG+LK F+ KRS+ A++++PI D NE+T HF++ I L+ T+
Sbjct: 204 VGRYVRVYGNLKTFERKRSITAFAVKPITDHNEVTYHFLQSIMQHLHLTK 253
>gi|340960305|gb|EGS21486.1| hypothetical protein CTHT_0033440 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 273
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 40 TLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T+KQ+ + ++DGA ++ +T VG V + + + +DDGTG I+
Sbjct: 39 TLRPVTIKQILDCKEPYPGGDLTLDGAPISQVTFVGQVRSVNAQTTNITYTVDDGTGMID 98
Query: 99 CSRWAHEQM---EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
+W E N N I YVR++G L + +++ + A+ +R I DFNE+ H +
Sbjct: 99 VKKWIDADRINDEMNSNNHIVPDTYVRIFGRLTTYNNRKHIGAHCVRIIRDFNEVNYHLL 158
Query: 156 ECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID------------ 203
E YV L T+ G +P T + + + I + D+G + D
Sbjct: 159 EATYVHLLLTK---GGPQRPGQTGAATVGD---IGGDSMFVDQGFNSDVQAKLAACSPAA 212
Query: 204 QMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ V +FL + N GVH N+I+ L ++A L + L+Y
Sbjct: 213 RTVFNFLADNP-MGGNEGVHVNLIASNTRLSYRDALDAGNELLSHGLIY 260
>gi|392595805|gb|EIW85128.1| replication protein A subunit RPA32 [Coniophora puteana RWD-64-598
SS2]
Length = 270
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 24/265 (9%)
Query: 14 GGGFMPSQA---TTVPDPSSSFSKNRNVRTLLPMTVKQL-SELSSNDESSASIDGADVNT 69
GGG++ + + P + ++ +L P+T+ QL + ++ ++ ++ ++
Sbjct: 8 GGGYLTGGSPYGSAAGSPGGAGRRSDVSHSLRPLTIFQLLNATQAHSDAEWMLEDTEIGH 67
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQME--FNEVNQISKGMYVRVYGHL 127
+T V V +Q++ ++ +DDGTG IE W +E ++ I +G YVRV G+L
Sbjct: 68 VTCVAHVVSVQNQATNNVYGLDDGTGHIEARHWTDSSLEEDVDKGAGIKEGTYVRVLGNL 127
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYN 187
K F KR +N +RP +EI H +E + V L R GS +P S + ++
Sbjct: 128 KMFGSKRYINVNHIRPAKSADEIYFHLLEVMTVTLMWER---GSPLRPGQQASETVGSHS 184
Query: 188 AISSNHYSFDEGKSIDQM----------VLDF-LRRPEFLANNNGVHRNVISQQLNLPMD 236
S++ + G +I+ +L F + +P A GV+ I + L
Sbjct: 185 VAQSDYTAQSHGGAINSQWAHLPELNRNILQFIINQP---ATEEGVNSAAILRALKATAL 241
Query: 237 KLMEALESLNENSLVY-SIDEFHYK 260
L +A+E L ++ L+Y +IDE H++
Sbjct: 242 ALDQAIEQLMDDGLIYTTIDESHFR 266
>gi|302895389|ref|XP_003046575.1| hypothetical protein NECHADRAFT_103427 [Nectria haematococca mpVI
77-13-4]
gi|256727502|gb|EEU40862.1| hypothetical protein NECHADRAFT_103427 [Nectria haematococca mpVI
77-13-4]
Length = 274
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 37/235 (15%)
Query: 39 RTLLPMTVKQLSELSSNDESSA-SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+L P+T+KQ+ + + + IDG+ + IT VG + + + F IDDGTG+I
Sbjct: 45 ESLRPVTIKQILDAEEAFQGADFKIDGSLITQITFVGQIRSVTPQPTNITFKIDDGTGQI 104
Query: 98 ECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
E +W + N + +VRV+G LK+F KR + A+ +RP+ DFNE++ H +E
Sbjct: 105 EVKKWV--DADNNNEPEFELDSHVRVWGRLKSFNSKRHVGAHVIRPVEDFNEVSYHMLEA 162
Query: 158 IYVQLYNTR-----------------LRGGSSNQPQMTNS--NHLKEYNAISSNHYSFDE 198
YV LY T+ + GG N N+ + L + ++ +SF
Sbjct: 163 TYVHLYFTKGPLGGQGPANGEGDSMFVDGGGYNDQAGGNAAPSKLSGCSGLAKKMFSF-- 220
Query: 199 GKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+ N GVH N I+ L + ++ A + L L+Y+
Sbjct: 221 -------------MNDAPGGNEGVHINGITSSTGLSVRDVLTAADELLGQGLIYT 262
>gi|401826582|ref|XP_003887384.1| single-stranded DNA-binding replication protein A medium subunit
[Encephalitozoon hellem ATCC 50504]
gi|395459902|gb|AFM98403.1| single-stranded DNA-binding replication protein A medium subunit
[Encephalitozoon hellem ATCC 50504]
Length = 226
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSAS-IDGADVNTITVV 73
GG++ S P F V+TL +T+KQ++ ++ SS +D A+V I ++
Sbjct: 6 GGYIQSS------PKREF---LGVKTLRALTIKQINNCEFDEPSSTHLVDSAEVTNIQII 56
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
G V + +F+++DGTG +C+ W E + + + +R+ G L+ F K
Sbjct: 57 GWVVSSRISATGSMFVLEDGTGSTDCTFWPSNSYEEEQCKVLEERNLLRISGSLRTFNGK 116
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNH 193
RS++ L + D N IT HF+ CIY L+ TR Q Q
Sbjct: 117 RSVSVSHLSQVEDSNLITYHFLNCIYQHLFYTR-------QLQREEVR------------ 157
Query: 194 YSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN--LPMDKLMEALESLNENSLV 251
+G +D++ D L + NG+H NV+ + L+ P +++ E ++ L + +
Sbjct: 158 ---GDGARLDRVQEDILECYRKNQDENGLHINVVIKMLSSKYPENEIRENIDLLLRDCHL 214
Query: 252 YSIDEFHYKSAV 263
YS+D YK+ V
Sbjct: 215 YSVDGLEYKTTV 226
>gi|299753376|ref|XP_002911864.1| hypothetical protein CC1G_13904 [Coprinopsis cinerea okayama7#130]
gi|298410272|gb|EFI28370.1| hypothetical protein CC1G_13904 [Coprinopsis cinerea okayama7#130]
Length = 265
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 17/231 (7%)
Query: 40 TLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L PMT+ QL++ + + E+ +D +V +T+VG + +Q + ++ I DGTG IE
Sbjct: 37 SLRPMTIAQLNKATQLHPEAEWRLDDIEVGQVTIVGQILSIQQQATNSVYAIVDGTGTIE 96
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W + + + + + +YVRV G+LKAF +R +N +RPI D +E+ H +E +
Sbjct: 97 ARQWLNTDTDGSIQQGLKENIYVRVAGNLKAFNSRRYINTTHIRPITDPHELYFHILESM 156
Query: 159 YVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMV-LDFLRRP--EF 215
V L R P S K+ ++ Y+ + DQ L L+R F
Sbjct: 157 TVTLSFER------GVPAAPGSAKGKDVVMADASVYNVGSTATSDQFSHLPVLQRQIVRF 210
Query: 216 LANNN----GVHRNVISQQLNLPMD--KLMEALESLNENSLVY-SIDEFHY 259
L N+ GVH + I++ + D K+ +AL+ L + VY ++DE H+
Sbjct: 211 LQENSTSDEGVHVSAIARAVGSGNDAQKISDALDKLMDAGHVYTTLDESHF 261
>gi|242803560|ref|XP_002484199.1| possible replication factor-a protein [Talaromyces stipitatus ATCC
10500]
gi|218717544|gb|EED16965.1| possible replication factor-a protein [Talaromyces stipitatus ATCC
10500]
Length = 320
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 26/244 (10%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T+KQ+ + + ++ E+ IDGAD+ ++ +G V ++ + + +DDGTG IE
Sbjct: 74 TLRPVTIKQIIDATQTHPEAPFQIDGADIGSVFCIGQVRNISTQSTNITYKLDDGTGEIE 133
Query: 99 CSRWAH--------------EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
+W + ++ + ++ +V+V+G LK F +KR L A+++RP+
Sbjct: 134 AKQWVDSTTARIEDDMDVDGKGVKHSTRKKVELNGFVKVFGKLKVFGNKRFLGAHNVRPV 193
Query: 145 IDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYS----FDEGK 200
D NEI HF+E V L+ G +Q + + + G+
Sbjct: 194 SDVNEIHVHFLEATAVHLFFK--HGPPPSQGGNSGGAGAAGAYGADAGGMKGGDDYSGGR 251
Query: 201 SIDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-ID 255
+ M R L N N G+H IS +L LP ++ +A + L L++S +D
Sbjct: 252 PLPPMSASARRVYNLLRNEPQSNEGLHMQNISAKLGLPSTEVQKAGDELLSAGLIFSTMD 311
Query: 256 EFHY 259
EF +
Sbjct: 312 EFTW 315
>gi|50425571|ref|XP_461381.1| DEHA2F23892p [Debaryomyces hansenii CBS767]
gi|49657050|emb|CAG89788.1| DEHA2F23892p [Debaryomyces hansenii CBS767]
Length = 260
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 10/246 (4%)
Query: 12 FAGGGFMPSQATTVPDPSSSFSKNRNVRT-LLPMTVKQLSELSSN-DESSASIDGADVNT 69
+ GGF ++ S+ + +R+ L P+T+KQ++E + + + ++N
Sbjct: 11 YGDGGFNTDIGNGGFQNENNGSQKQQLRSSLTPVTIKQITEATQPIPDGEFQVHNVNLNL 70
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ--MEFNEVNQISKGMYVRVYGHL 127
++ VG+V ++QD + I+DGTG IE +W + M+ NE + Y+ V G L
Sbjct: 71 VSFVGVVRNVQDITSAILITIEDGTGSIEVRKWIDDSNAMDENEQEKYEMNKYIYVTGAL 130
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYN 187
K F K++L ++RPI D NEI H + I L L ++ + + N L
Sbjct: 131 KEFNGKKNLQHATMRPITDHNEILYHHLSAISHHLKAQGLSARANGEQNQSQDNGL---- 186
Query: 188 AISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNE 247
+ + D G SI +L + R + GV ISQ+LN+ D ++E L +
Sbjct: 187 -FVKDPHGMDVGTSIQDKILTVI-RDNTSSMQEGVPVPFISQKLNVTDDLVLEQCSELID 244
Query: 248 NSLVYS 253
N +YS
Sbjct: 245 NGKIYS 250
>gi|299472930|emb|CBN80499.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 329
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 34 KNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDD 92
KN+ ++LL + +KQ+ E +N +S A IDGADV+ I +VG + ++ + + ++D
Sbjct: 60 KNKEQQSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVED 119
Query: 93 GTGRIECSRWAHEQMEFNEVNQISK-----GMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
TGR++ + ++ N+ + G YVRV+G++++++D R AY++ PI D
Sbjct: 120 TTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPITDM 179
Query: 148 NEITSHFVECIYVQLYNTR--LRG-----GSSNQPQMTNSNHLKEYNAISSNH 193
+E+T H +E IY L+NT+ L G G + Q N +N SS H
Sbjct: 180 DEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQH 232
>gi|440639394|gb|ELR09313.1| hypothetical protein GMDG_03881 [Geomyces destructans 20631-21]
Length = 286
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCD 78
SQA + P S + ++ TL P+T+KQ+ + + ++ +DG ++ IT VG V
Sbjct: 32 SQAGSQDTPGGSKTYGKD--TLRPVTIKQIIDAQQPHPDAEFKVDGHEMTQITFVGQVRA 89
Query: 79 MQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEV-NQISKGMYVRVYGHLKAFQDKRSLN 137
+ + F +DDGTG IE W + + + I + YVRV G LKAF +K+ +
Sbjct: 90 ISVQATNQTFKLDDGTGLIEVKVWLDVDAGPSPIISSIKENTYVRVLGRLKAFNNKKHVA 149
Query: 138 AYSLRPIIDFNEITSHFVECIYVQLYNTR 166
A+ +RP+ DFNEI +H +E YV LY +R
Sbjct: 150 AHVVRPVTDFNEINAHLLEATYVHLYFSR 178
>gi|343429403|emb|CBQ72976.1| related to RFA2-DNA replication factor A, 36 kDa subunit
[Sporisorium reilianum SRZ2]
Length = 285
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 114/208 (54%), Gaps = 19/208 (9%)
Query: 40 TLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T++QL + + ++ ++DGA++ +T V +V ++ + ++DGTG+IE
Sbjct: 47 TLRPVTIRQLINAEQPHPDAEFTLDGAELGQLTFVAVVRNISRNATNIAYSVEDGTGQIE 106
Query: 99 CSRWAHEQME-FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W + N+ + I + +YVRV G LK+FQ++RS++A +R + D+NE+ H +E
Sbjct: 107 VRQWLDSSGDDTNKASDIRQNVYVRVLGTLKSFQNRRSISAGHMRLVTDYNEVMFHRLEA 166
Query: 158 IYVQLYNTRL-------RGGSSN-----QPQMTNSNHLKEYNAISSNHYSFDEGKSIDQM 205
++ L TR GG+++ QPQ ++ N Y+ ++ D+ KS++ +
Sbjct: 167 VHSHLQLTRGPKASQANGGGAAHGVDRAQPQTSDIN---AYSGSANKQNVLDQYKSLEPL 223
Query: 206 VLDFLR--RPEFLANNNGVHRNVISQQL 231
+ E + +GVH N+I++ L
Sbjct: 224 PRQIMGIVTTEADKHTDGVHVNLIARML 251
>gi|392512693|emb|CAD25396.2| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBUNIT) [Encephalitozoon
cuniculi GB-M1]
Length = 226
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 25/229 (10%)
Query: 38 VRTLLPMTVKQLSELSSNDESSAS-IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
V+TL +T+KQ+ ++ SS +D A+V + ++G V + +F+++DGTG
Sbjct: 20 VKTLRALTIKQIGSCDFDETSSTHLVDSAEVTNVQIIGWVVSSKTSATGSMFVLEDGTGS 79
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
++C+ W E + + + ++V G L+ F KRS++A L + D N +T HF+
Sbjct: 80 VDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTFNGKRSVSASHLSAVEDSNFVTYHFLS 139
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFL 216
CIY L+ TR + ++ N +G +D++ D L
Sbjct: 140 CIYQHLFYTR----QLQREEVKN------------------DGAKLDRIQEDILECYRRN 177
Query: 217 ANNNGVHRNVISQQLN--LPMDKLMEALESLNENSLVYSIDEFHYKSAV 263
+ NG+H NV+ + L+ ++ E ++ L + +YS+D YK+ +
Sbjct: 178 QDENGLHINVVIKMLSSKYSESEVRENIDVLLRDCHLYSVDGLEYKTTI 226
>gi|19074286|ref|NP_585792.1| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBUNIT) [Encephalitozoon
cuniculi GB-M1]
Length = 274
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 38 VRTLLPMTVKQLSELSSNDESSAS-IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
V+TL +T+KQ+ ++ SS +D A+V + ++G V + +F+++DGTG
Sbjct: 68 VKTLRALTIKQIGSCDFDETSSTHLVDSAEVTNVQIIGWVVSSKTSATGSMFVLEDGTGS 127
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
++C+ W E + + + ++V G L+ F KRS++A L + D N +T HF+
Sbjct: 128 VDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTFNGKRSVSASHLSAVEDSNFVTYHFLS 187
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFL 216
CIY L+ TR Q Q ++G +D++ D L
Sbjct: 188 CIYQHLFYTR-------QLQREEVK---------------NDGAKLDRIQEDILECYRRN 225
Query: 217 ANNNGVHRNVISQQLN--LPMDKLMEALESLNENSLVYSIDEFHYKSAV 263
+ NG+H NV+ + L+ ++ E ++ L + +YS+D YK+ +
Sbjct: 226 QDENGLHINVVIKMLSSKYSESEVRENIDVLLRDCHLYSVDGLEYKTTI 274
>gi|322701666|gb|EFY93415.1| putative replication factor-a protein [Metarhizium acridum CQMa
102]
Length = 278
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 40 TLLPMTVKQLSELSSNDESSAS----IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+L +T+KQ+ E DE+ ID + IT VG V ++ + IDDGTG
Sbjct: 43 SLRSVTIKQILEA---DEAFTGADFKIDNTTITQITFVGQVRNINPQPTNVTLKIDDGTG 99
Query: 96 RIECSRW-AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
+IE +W ++ + +Q YVRV+G LK+F +KR + A+ +RP+ DFNE+ H
Sbjct: 100 QIEVKKWIDADKADDANADQYELDSYVRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHL 159
Query: 155 VECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMV-------- 206
+E YV LY TR G Q N + + + G QM+
Sbjct: 160 LEATYVHLYLTR---GPLGQDGAANGGGESMFVGGGGYGGNANGGGGSGQMLSKVSGCSA 216
Query: 207 -----LDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+F+ + N GVH NVIS L + ++ A + L + L+Y+
Sbjct: 217 AAKKMFNFMNGAPGM--NEGVHLNVISSSTGLSVRDVLAASDELLGHGLIYT 266
>gi|449329442|gb|AGE95714.1| replication factor a protein 2 32kDa subunit [Encephalitozoon
cuniculi]
Length = 274
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 38 VRTLLPMTVKQLSELSSNDESSAS-IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
V+TL +T+KQ+ ++ SS +D A+V + ++G V + +F+++DGTG
Sbjct: 68 VKTLRTLTIKQIGSCDFDETSSTHLVDSAEVTNVQIIGWVVSSKTSATGSMFVLEDGTGS 127
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
++C+ W E + + + ++V G L+ F KRS++A L + D N +T HF+
Sbjct: 128 VDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTFNGKRSVSASHLSAVEDSNFVTYHFLS 187
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFL 216
CIY L+ TR Q Q ++G +D++ D L
Sbjct: 188 CIYQHLFYTR-------QLQREEVK---------------NDGAKLDRIQEDILECYRRN 225
Query: 217 ANNNGVHRNVISQQLN--LPMDKLMEALESLNENSLVYSIDEFHYKSAV 263
+ NG+H NV+ + L+ ++ E ++ L + +YS+D YK+ +
Sbjct: 226 QDENGLHINVVIKMLSSKYSESEVRENIDVLLRDCHLYSVDGLEYKTTI 274
>gi|346977188|gb|EGY20640.1| replication factor-A protein [Verticillium dahliae VdLs.17]
Length = 294
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 34/271 (12%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVV 73
GGFM + ++ ++R P T+KQ L + + IDGA V +T +
Sbjct: 21 GGFMYGGSQQGSQGGGKGYQDESLR---PATIKQILDAEEAYPGADFKIDGATVTQVTFI 77
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAH-EQMEFNEVNQISKG----------MYVR 122
G V + + + +DDGT +E +W ++ + + ++ ++ G +YVR
Sbjct: 78 GQVRAINPQATNITYKLDDGTATLEVKKWVDTDKKDDDLMDGVAGGPGSGSGVDLDVYVR 137
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR--LRG------GSSNQ 174
V+G +K+F KR + A+ LR + DFNE+ H +E YV L+ T+ L G G+
Sbjct: 138 VWGRIKSFNGKRHVGAHFLRAVTDFNEVNYHLLESTYVHLFFTKGPLGGVKAEDNGAGMF 197
Query: 175 PQMTNSNHLKEYNAISSNHYSFDEGKSI--------DQMVLDFLRRPEFLANNNGVHRNV 226
N+N+ + I ++H S G+SI Q + +FL N GVH NV
Sbjct: 198 VDGGNNNNKNNNSNIGNSHASHATGQSIKVAQCTPMGQKMYNFLVNAP--GGNEGVHMNV 255
Query: 227 ISQQLNLPMDKLMEALESLNENSLVY-SIDE 256
I+ + M ++ A + L LVY +ID+
Sbjct: 256 IASGAGMSMRDILGAADELLGQGLVYTTIDD 286
>gi|226492312|ref|NP_001140245.1| uncharacterized protein LOC100272286 [Zea mays]
gi|194698682|gb|ACF83425.1| unknown [Zea mays]
gi|413939584|gb|AFW74135.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 188
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 19/168 (11%)
Query: 111 EVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+V+ +S+ GMY+ V G LK Q+++ A+S+RPI DFNE+T HF++C+ + + NT L+
Sbjct: 24 DVHWLSRNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKA 83
Query: 170 GSSNQPQMTN-------SNHLKEYN---AISSNHYSFDEGKS---IDQMVLDFLRRPEFL 216
GS P N SN E + ++ S+ G S + VL+F P L
Sbjct: 84 GS---PARINSSMGVSFSNGFSESSTPTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANL 140
Query: 217 ANNNGVHRNVISQQLN-LPMDKLMEALE-SLNENSLVYSIDEFHYKSA 262
+ +GVH + + ++ LP ++ +A++ +++ L +IDEFHYK+
Sbjct: 141 ESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFHYKAT 188
>gi|71894737|ref|NP_001026063.1| replication protein A 32 kDa subunit [Gallus gallus]
gi|53129873|emb|CAG31422.1| hypothetical protein RCJMB04_6d17 [Gallus gallus]
Length = 267
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASI 62
G FDG AGG + P + + K R+ ++++P TV QL DE+ I
Sbjct: 6 GNFDGGYGPAGGYTQSPGGFSSPTGAQAEKKQRSRSQSIVPCTVSQLLAAEQVDEA-FRI 64
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
+++ +TVVGIV + ++ +DD T ++ +W +E + G YV
Sbjct: 65 HDVEISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGSENIVVPPGTYV 124
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V GHL++FQ+K+SL A+ + P+ + NE T+H +E + + + +S PQ S
Sbjct: 125 KVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLTLASRAPQSFTSA 184
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDK 237
+ + + + VL+ ++ PE G+ + QL N+ +
Sbjct: 185 GMSDVGGYGGGSLPVNGLTAHQSQVLNLIKNCHSPE------GMSLQELKLQLHNVSIPT 238
Query: 238 LMEALESLNENSLVYS-IDEFHYKS 261
+ +A+E L+ +YS +D+ HYKS
Sbjct: 239 IKQAVEFLSSEGHIYSTVDDDHYKS 263
>gi|396081506|gb|AFN83122.1| replication factor A protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 226
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 34/254 (13%)
Query: 13 AGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSAS-IDGADVNTIT 71
+ GG++ S P F ++TL +T+KQ++ ++ SSA ID A+V +
Sbjct: 4 SDGGYIQSS------PKREF---LGIKTLRALTIKQINNCEFDEISSAHLIDSAEVTNVQ 54
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQ 131
++G V + +F+++DGTG ++C+ W E + + + +V G L+ F
Sbjct: 55 IIGWVVSSRISATGSMFVLEDGTGSVDCTFWPSNSYEEEQCKILEEKNLFKVNGSLRTFN 114
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISS 191
KRS++ L + D N IT HF+ CI+ L+ TR L+ S
Sbjct: 115 GKRSVSVSHLSQVEDSNFITYHFLNCIHQHLFYTR---------------QLQREEVRS- 158
Query: 192 NHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN--LPMDKLMEALESLNENS 249
+G +D++ D L + NG+H NV+ + L+ P +++ E ++ L +
Sbjct: 159 ------DGARLDRIQEDILECYRKNQDENGLHINVVIKMLSSKYPENEIRENIDVLLRDC 212
Query: 250 LVYSIDEFHYKSAV 263
+YS+D YK+ V
Sbjct: 213 HLYSVDGLEYKTTV 226
>gi|400597994|gb|EJP65714.1| RNA polymerase Rpb1 [Beauveria bassiana ARSEF 2860]
Length = 1945
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVV 73
GGFM + ++ ++R P+TVKQ+ E IDGA +T V
Sbjct: 1691 GGFMADGSQQGSQSGGKAYQDESLR---PVTVKQVVEAEEGYSGGDFKIDGASAPQVTFV 1747
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQD 132
G + + + IDDGTG+IE +W ++ E E ++ YVRV+G LK+F +
Sbjct: 1748 GQIRSVNAQATNITLKIDDGTGQIEVKKWIDGDKPEDPEAYELDS--YVRVWGRLKSFSN 1805
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
KR + A+ +RP+ DFNE+ H +E YV L+ TR
Sbjct: 1806 KRHVGAHVIRPVDDFNEVNYHMLEATYVHLFFTR 1839
>gi|363748783|ref|XP_003644609.1| hypothetical protein Ecym_2034 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888242|gb|AET37792.1| Hypothetical protein Ecym_2034 [Eremothecium cymbalariae
DBVPG#7215]
Length = 280
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 21/272 (7%)
Query: 6 FDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDG 64
F+ ++ +GGGF SQA+ P+S+ + TL P+T+KQ+ E + ++
Sbjct: 9 FNEYSSVSGGGFDNSQAS-AGKPNSA--GGQTTATLTPVTIKQILEAKQFVQDGPYVVNN 65
Query: 65 ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK------- 117
+++ I VG+V ++ D ++DGTG++E +W+++Q + +Q K
Sbjct: 66 IELHNICFVGVVRNVVDHTANVNVTVEDGTGQLEFRQWSNDQKDIERASQGEKGEYNSEV 125
Query: 118 ------GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV-QLYNTRLRGG 170
G YV+V+ L+ F K ++ ++PI +FNE+ +H + I L N +L
Sbjct: 126 SQQFQIGSYVKVFATLREFGGKMNIQYALVKPIENFNEVIAHHLSAIKCYALANGKLAHP 185
Query: 171 SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRP--EFLANNNGVHRNVIS 228
+S T++ ++ F K Q +LDF R + AN VH +I+
Sbjct: 186 TSAVGTGTSTGQESNAQSLFVQDNDFSNAKPATQRILDFCRDQCRDKDANTFSVHTKLIA 245
Query: 229 QQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
Q L + D + ++L E +Y + DE Y
Sbjct: 246 QSLGMLEDDVRMHCQTLTEQGFIYPTFDENSY 277
>gi|326932867|ref|XP_003212533.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 1
[Meleagris gallopavo]
Length = 267
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 14/265 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASI 62
G FDG AGG + P + + K R+ ++++P TV QL DE+ I
Sbjct: 6 GNFDGGYGPAGGYTQSPGGFSSPTGAQAEKKQRSRSQSIVPCTVSQLLAAEQVDEA-FRI 64
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
+++ +TVVGIV + ++ +DD T ++ +W +E + G YV
Sbjct: 65 HDVEISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGSENIVVPPGTYV 124
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V GHL++FQ+K+SL A+ + P+ + NE T+H +E + + + +S PQ S
Sbjct: 125 KVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLMLASRAPQSFTSA 184
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDK 237
+ + + + + VL+ ++ PE G+ + QL N+ +
Sbjct: 185 GMSDVGSYGGGSLPVNGLTAHQSQVLNLIKNCHSPE------GMSLQELKLQLHNVSIPT 238
Query: 238 LMEALESLNENSLVYS-IDEFHYKS 261
+ +A+E L+ +YS +D+ HYKS
Sbjct: 239 IKQAVEFLSSEGHIYSTVDDDHYKS 263
>gi|388582046|gb|EIM22352.1| replication protein A, subunit RPA32 [Wallemia sebi CBS 633.66]
Length = 272
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 31/260 (11%)
Query: 15 GGFMP-SQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITV 72
GGF+ SQ D S S ++N+N TL P+T+KQ L + + I+G D+ +++
Sbjct: 20 GGFLTNSQGGGYTDSSPS-TRNKNEDTLRPVTIKQVLGASQPHSDFPFQIEGRDITHVSI 78
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM-EFNEVNQISKGMYVRVYGHLKAFQ 131
V +V + ++ ++DGTG ++ W E I + YVRV G LK+F
Sbjct: 79 VAVVRSASKQATSAVYSLEDGTGTLDVRYWMDSSGGESESTTDIQQNQYVRVIGALKSFH 138
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN------------QPQMTN 179
DK + A ++PI DF+EI H E + V L ++R G+ Q +
Sbjct: 139 DKLQITAQVVKPITDFHEIFYHKAEALAVTL---QIRKGTDTIMNESKPSATYGQESTSE 195
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLM 239
N+++ Y H KS+ + V + + R + GVH I+Q+ + L
Sbjct: 196 PNYMRPYLTFPELH------KSVMKAVFEEVDR-----SPQGVHVARIAQRCPKGDEALT 244
Query: 240 EALESL-NENSLVYSIDEFH 258
EA+E L +E L D+ H
Sbjct: 245 EAIEYLISEGHLFTGEDDEH 264
>gi|346323105|gb|EGX92703.1| DNA-directed RNA polymerase I subunit RPA1 [Cordyceps militaris CM01]
Length = 1929
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 40 TLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+TV+Q+ E IDGA +T VG + + + IDDGTG+IE
Sbjct: 1693 SLRPVTVRQIIEAEEGYSGGDFKIDGASAPQVTFVGQIRSVNAQATNITLKIDDGTGQIE 1752
Query: 99 CSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W ++ E E ++ YVRV+G LK+F +KR + A+ +RP+ DFNE+ H +E
Sbjct: 1753 VKKWIDGDKPEDPEAYELDS--YVRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHMLEA 1810
Query: 158 IYVQLYNTR 166
YV L+ TR
Sbjct: 1811 TYVHLHFTR 1819
>gi|358366420|dbj|GAA83041.1| possible replication factor-a protein [Aspergillus kawachii IFO
4308]
Length = 286
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 40/269 (14%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGI 75
FMP + P S N+ TL P+T+KQ L + E+ ID A++++I +G
Sbjct: 21 FMPGEMNNSPSGGKSDYANQ---TLRPITIKQALDAVQPYPEAPYQIDSAEISSICFIGQ 77
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRW--------------AHEQMEFNEVNQISKGMYV 121
V ++ + + IDDGTG IE +W A+ + ++ Y
Sbjct: 78 VRNISSQSTNVTYKIDDGTGEIEAKQWIDSMTADSMDTDDAANPKAARGRDGKVELNGYA 137
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK+F +KR + A+ +RP+ + +E+ H +E V L+ TR G+
Sbjct: 138 KVFGKLKSFGNKRFVGAHCVRPVQNLDEVHCHLLEASAVHLFFTRGAPGAGAGAGGGVKG 197
Query: 182 HLK------EYNAISSNHYSFDEGKSIDQM------VLDFLR-RPEFLANNNGVHRNVIS 228
EY A + GK++ M V LR P+ +N G+H +I+
Sbjct: 198 DAAMGGTGDEYGAGAGG-----VGKNLPPMSPVAKRVYQLLRTEPQ---SNEGLHAQLIA 249
Query: 229 QQLNLPMDKLMEALESLNENSLVYS-IDE 256
+L+LPM + A + L +++S +DE
Sbjct: 250 AKLSLPMPDVARAGDELLTAGVIFSTVDE 278
>gi|402224913|gb|EJU04975.1| replication protein A subunit RPA32 [Dacryopinax sp. DJM-731 SS1]
Length = 281
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 127/254 (50%), Gaps = 27/254 (10%)
Query: 30 SSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIF 88
S ++ +L P+TV+Q+ + ++ IDG+D ++T V V + F
Sbjct: 29 SGNTRKAGTHSLRPVTVRQVVQSDHAFGDAEWQIDGSDAPSVTFVAQVRGKAQQATNTAF 88
Query: 89 LIDDGTGRIECSRWAHEQ-MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
++DGTG+I+ W+ Q + ++I ++VRV G +K F K+ + A +RPI D
Sbjct: 89 SLEDGTGQIDARLWSDSQDPDTAAGSEIENDVWVRVQGTIKEFNKKKHVAAQRVRPITDM 148
Query: 148 NEITSHFVECIYVQLYNTR--LRGGSS-------------NQPQMTNSNH-LKEYNAISS 191
E+ H+ E + V L TR ++GG N P +S++ + ++
Sbjct: 149 QEVYYHYCEALSVHLELTRGQVKGGGGALTSGAANVHAQVNGPTNVSSDYTMGGGGGGTA 208
Query: 192 NHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLP---MDKLMEALESLNEN 248
N+Y+ ++D+ ++ F+ E AN++G H IS+ + P +++ ALE L+++
Sbjct: 209 NNYA--HMPALDRAIMQFI---ESSANSDGCHLTAISRAVARPGVTAEQISLALERLSDD 263
Query: 249 SLVYSI-DEFHYKS 261
VY+ D+ H++S
Sbjct: 264 GHVYNTHDDNHFQS 277
>gi|389635329|ref|XP_003715317.1| replication protein A 32 kDa subunit [Magnaporthe oryzae 70-15]
gi|351647650|gb|EHA55510.1| replication protein A 32 kDa subunit [Magnaporthe oryzae 70-15]
gi|440464975|gb|ELQ34323.1| replication protein A 32 kDa subunit [Magnaporthe oryzae Y34]
gi|440480859|gb|ELQ61499.1| replication protein A 32 kDa subunit [Magnaporthe oryzae P131]
Length = 275
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 6 FDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDG 64
++ A GGGFM K+ L P+TVKQL ++ + ++ +DG
Sbjct: 14 YNAQGAEDGGGFMGGSQQGSQ--GGPGGKSYQDECLKPVTVKQLLDVQAPYPDADFLLDG 71
Query: 65 ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM--EFNEVNQISKGMYVR 122
+ IT+VG V + + + IDDGTG I+ RW + + + +Q YVR
Sbjct: 72 RAITQITLVGQVRSINPQPTNITYRIDDGTGTIDVKRWIDPEKAEDADAASQHQPDSYVR 131
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
V+G LKAF ++R + A +RP+ DFNE+ H +E YV L R G ++
Sbjct: 132 VWGKLKAFNNRRHVGALFVRPVEDFNEVNYHMLEVAYVHLDAVRQSSGGGGGAGGGGDDN 191
Query: 183 L--KEYNAISSNHYSFDEGKSID-QMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLM 239
+ Y S S + Q + + L+ A N G+ N+I++ +N+ + +
Sbjct: 192 MFVDSYGGGGGGGGSKAANCSTNAQRLFNHLQNSS--AGNEGLEANIIARGINMSVRDVE 249
Query: 240 EALESLNENSLVY-SIDEFHYKS 261
A + L L+Y ++D+ + +
Sbjct: 250 AAADELLSAGLIYPTVDDHTWAT 272
>gi|428171079|gb|EKX39999.1| replication protein A2, 32kDa [Guillardia theta CCMP2712]
Length = 288
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 39 RTLLPMTVKQL--SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
+ +LP+++KQ+ + S DE IDG D +T++ + D+++ F ++DGTG
Sbjct: 34 KGMLPVSIKQVMNAPQDSQDED-IKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGN 92
Query: 97 IECSRWA-HEQMEF--NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
I+ W ++ EF + G YVRV G +++ KRS+ A+ LR + DFNE+T H
Sbjct: 93 IDAIMWIDQDESEFMVRSRAEWVVGTYVRVVGQVRSHNGKRSMVAFHLRTVTDFNELTYH 152
Query: 154 FVECIYVQLYNTR 166
+ I+ LYNTR
Sbjct: 153 LFDTIHAHLYNTR 165
>gi|384253039|gb|EIE26514.1| replication protein A, subunit RPA32 [Coccomyxa subellipsoidea
C-169]
Length = 277
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 28/272 (10%)
Query: 9 AAAFAGGGFMPSQ---ATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGA 65
A+ F GGGF+ SQ P P S S+ +R + T+KQL D + A I
Sbjct: 11 ASQFGGGGFLGSQNDGDARSPAPKSIASRKEGLRAV---TLKQLI-----DANKAEIHD- 61
Query: 66 DVNT---ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHE--QMEFNEVNQISKGMY 120
DVN+ +T VG + ++++ I DGTG ++++ + + G+Y
Sbjct: 62 DVNSFHNVTCVGKILNVRENNNIVEMTIFDGTGTYTVHYYSNDIDDSMAQRIAEWRTGVY 121
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS--------- 171
VRV+G++ F D + AY++R I DFNE+T H ++ I+ + + GS
Sbjct: 122 VRVHGNVSDFDDNWRILAYNIRTITDFNEVTYHGLQAIFQHAHIAKGAPGSGVAQAQSGI 181
Query: 172 SNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL 231
P + D +I + VL +P LA++ G+ +S QL
Sbjct: 182 GGAPVAQTGGAGGTEFGGGPDEVGNDGLTNIQRKVLSVFEQPAHLASSEGITVEQVSAQL 241
Query: 232 -NLPMDKLMEALESLNENSLVYSI-DEFHYKS 261
NL ++ +A+ L +N+ +Y++ DE+HYKS
Sbjct: 242 PNLTPKQVRDAVTFLMDNANIYTVSDEYHYKS 273
>gi|417398120|gb|JAA46093.1| Putative single-stranded dna-binding replication protein a rpa
medium 30 kd subunit [Desmodus rotundus]
Length = 269
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 132/264 (50%), Gaps = 18/264 (6%)
Query: 8 GAAAFAG-GGFMPSQAT-TVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDG 64
G++ F G GG+ S P PS + K+R + ++P T+ QL + DE I
Sbjct: 10 GSSTFGGAGGYTQSPGGFGSPTPSQAEKKSRARAQHVVPCTISQLLSATLVDEV-FRIGN 68
Query: 65 ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRV 123
+++ + ++GI+ + ++ IDD T ++ +W E + YV+V
Sbjct: 69 VEISQVVIIGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASGENTVVPPETYVKV 128
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHL 183
GHL++FQ+K+SL A+ + P+ D NE T+H +E + + TR S+ + ++N +
Sbjct: 129 AGHLRSFQNKKSLVAFKIMPLDDMNEFTAHILEVVNAHMMLTRANQPSAGRAPISNPG-M 187
Query: 184 KEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKL 238
E N + G ++ Q VL+ ++ RPE G++ + + QL ++ + +
Sbjct: 188 GEAGNFGGNSFIPANGLTVAQNQVLNLIKACPRPE------GLNFHDLKNQLQHMTVASI 241
Query: 239 MEALESLNENSLVYS-IDEFHYKS 261
+A++ L+ +YS +D+ H+KS
Sbjct: 242 KQAVDFLSNEGHIYSTVDDDHFKS 265
>gi|342879431|gb|EGU80679.1| hypothetical protein FOXB_08820 [Fusarium oxysporum Fo5176]
Length = 277
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 39 RTLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+L P+T+KQ+ L + + + + IDG+ V IT VG + +Q + IDDGTG
Sbjct: 44 ESLRPVTIKQI--LDAEEAYAGADFKIDGSPVTQITFVGQIRKIQPQPTNITLNIDDGTG 101
Query: 96 RIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
IE +W + + +VR++G LK+F +KR + A+ +RP+ DFNE+ H +
Sbjct: 102 MIEVKKWIDVDKQDDADPGFELESHVRIWGRLKSFNNKRHVGAHVIRPVADFNEVNYHML 161
Query: 156 ECIYVQLYNTR 166
E YV LY T+
Sbjct: 162 EATYVHLYFTK 172
>gi|307110266|gb|EFN58502.1| hypothetical protein CHLNCDRAFT_140549 [Chlorella variabilis]
Length = 277
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Query: 39 RTLLPMTVKQLSEL-SSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+TL +T+KQL + S+ + + +DG ++ +T+VG V + F IDDGTG+
Sbjct: 35 QTLRALTIKQLHDANSTRQDDTLLLDGKEITNVTLVGKVLSTSESGLTFGLKIDDGTGKA 94
Query: 98 ECSRWAHE---QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
+ W E ++E + GMYVRV+GH+ F + + A+++R + D NE+T HF
Sbjct: 95 DVKIWISEDDSELEKQRRAEWRAGMYVRVHGHISNFGRTQDVLAFNIRTVTDHNEVTYHF 154
Query: 155 VECIYVQLYNTR 166
++CI+ ++ T+
Sbjct: 155 LQCIFQHVHLTK 166
>gi|229367182|gb|ACQ58571.1| Replication protein A 32 kDa subunit [Anoplopoma fimbria]
Length = 275
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 20/266 (7%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRT----LLPMTVKQLSELSSNDESSASIDGADVNT 69
GGG+ S P++S + RT ++P TV QL S DE+ + +V
Sbjct: 13 GGGYTQSPGG-FASPAASQGGEKKGRTRASQIIPCTVSQLMSASQADEA-FKVGEVEVAQ 70
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLK 128
+T+VGI+ + +DD TG ++ +W + + + G YV+V G+L+
Sbjct: 71 VTIVGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVLPLGTYVKVSGNLR 130
Query: 129 AFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNA 188
+FQ+ RS+ A+ +RP+ D NEITSH +E + +L ++ + S M++ A
Sbjct: 131 SFQNHRSVVAFGVRPLEDMNEITSHMLEVVQARLALSKPQTMLSAGGGMSSDVTPISRPA 190
Query: 189 ISSNHYSF-------DEGKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLM 239
+ S S+ + G S +Q VL +R + G+ + Q+L+ + M +
Sbjct: 191 MESRGGSYAGASDMGNNGLSANQNQVLSLIR---GCPDPQGISIQDLKQRLSVMSMAVIK 247
Query: 240 EALESL-NENSLVYSIDEFHYKSAVN 264
+A+E L NE + +IDE HYKS N
Sbjct: 248 QAVEFLSNEGHIFSTIDEDHYKSTDN 273
>gi|432910341|ref|XP_004078319.1| PREDICTED: replication protein A 32 kDa subunit-like [Oryzias
latipes]
Length = 271
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 20/252 (7%)
Query: 26 PDPSSSFSKNRNVRT-LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P S K R T ++P TV QL S DE+ + +VN +T+VGI+ DK
Sbjct: 26 PGLSQGEKKGRTRSTQIIPCTVSQLMSASQADEA-FKVGEVEVNQVTIVGIIRST-DKSM 83
Query: 85 QFI-FLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
+I + +DD TG ++ +W + + + G YV+V G+L++FQ+ RS+ A+ +R
Sbjct: 84 TYIQYRVDDMTGAPMDVKQWVDTEDPSVDSTVLPPGTYVKVSGNLRSFQNHRSMVAFCIR 143
Query: 143 PIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYS-----FD 197
P+ D NEITSH +E + + + + MT + K Y+ +
Sbjct: 144 PLEDMNEITSHMLEVVQAHMALGKPQNTLGGGGGMTAGSVSKPAIGGMGGSYAGASDMTN 203
Query: 198 EGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVY 252
G S +Q VL +R P+ ++ + HR ++LPM K +A+E L NE +
Sbjct: 204 NGLSPNQNQVLSLIRGCPEPQGISIQDLKHR---LGGMSLPMIK--QAVEFLSNEGHIFS 258
Query: 253 SIDEFHYKSAVN 264
+IDE H+KS N
Sbjct: 259 TIDEDHFKSTDN 270
>gi|380490231|emb|CCF36157.1| hypothetical protein CH063_07785 [Colletotrichum higginsianum]
Length = 279
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Query: 40 TLLPMTVKQLSEL-SSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ+ + + + IDGA V +T V + + + +DDGTG IE
Sbjct: 43 SLRPVTIKQIIDADEAYPGADFKIDGATVTQVTFVAQIRQISPQPTNITLKLDDGTGLIE 102
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W + + + YVRV+G LK+F +KR + A+ +RP+ DFNE+ H +E
Sbjct: 103 VKKWVDTDKKDDADANLEVEGYVRVWGRLKSFNNKRHVGAHFIRPVTDFNEVNYHLLEAT 162
Query: 159 YVQLYNTR 166
YV LY ++
Sbjct: 163 YVHLYFSK 170
>gi|359319064|ref|XP_003638988.1| PREDICTED: replication protein A 32 kDa subunit-like [Canis lupus
familiaris]
Length = 270
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 136/265 (51%), Gaps = 19/265 (7%)
Query: 8 GAAAFAG-GGFMPSQAT-TVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDG 64
G++AF+G GG+ S P PS + K+R + ++P T+ QL + DE I
Sbjct: 10 GSSAFSGAGGYTQSPGGFGSPTPSQAEKKSRARAQHIVPCTISQLLSATLVDEM-FKIGN 68
Query: 65 ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRV 123
+++ +T+VGI+ + ++ IDD T ++ +W +E + YV+V
Sbjct: 69 VEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKV 128
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY----NTRLRGGSS--NQPQM 177
GHL++FQ+K+SL A+ + P+ D NE T+H +E + + N++ G + + P M
Sbjct: 129 AGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILEVVNAHMILSKSNSQPPAGRAPISNPGM 188
Query: 178 TNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDK 237
+ + ++I +N + + + ++ ++ RPE L +++ +Q ++ +
Sbjct: 189 GETGNFGGISSIPANGLTVAQNQVLN--LIKACPRPEGLN-----FQDLKNQLQHMSVAS 241
Query: 238 LMEALESLNENSLVYS-IDEFHYKS 261
+ +A++ L+ +YS +D+ H+KS
Sbjct: 242 IKQAVDFLSNEGHIYSTVDDDHFKS 266
>gi|303389528|ref|XP_003072996.1| replication factor A protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302140|gb|ADM11636.1| replication factor A protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 226
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSAS-IDGADVNTITVV 73
GG++ S P F ++TL +T+KQ++ ++ SS ID A+V + +V
Sbjct: 6 GGYIQSS------PKREF---LGIKTLRTLTIKQINNCDFDEASSTHMIDSAEVTNVQIV 56
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
G V + +F+++DGT ++C+ W E + + + ++V G L+ F K
Sbjct: 57 GWVVSSRTSATGSMFVLEDGTESVDCTFWPSNSYEEEQCKALEEHGLLQVNGSLRTFNGK 116
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNH 193
RS++ L + D N IT HF+ CIY L+ TR Q + S+ K
Sbjct: 117 RSVSVSHLAQVEDPNLITYHFLNCIYQHLFYTR-----QLQREEVKSDGAKL-------- 163
Query: 194 YSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN--LPMDKLMEALESLNENSLV 251
G+ I + +L+ R+ + + NG+H NV+ + L+ P ++ E ++ L + +
Sbjct: 164 -----GR-IQEDILECYRKNQ---DENGLHINVVIKMLSSKYPESEIKENIDVLLRDCHL 214
Query: 252 YSIDEFHYKSAV 263
YS+D YK+ V
Sbjct: 215 YSVDGLEYKTTV 226
>gi|428698227|pdb|4GOP|B Chain B, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|428698230|pdb|4GOP|Y Chain Y, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|451928924|pdb|4GNX|B Chain B, Structure Of
gi|451928927|pdb|4GNX|Y Chain Y, Structure Of
Length = 136
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 40 TLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T++Q L+ + ++ +DGA++ +T V +V ++ + ++DGTG+IE
Sbjct: 8 TLRPVTIRQILNAEQPHPDAEFILDGAELGQLTFVAVVRNISRNATNVAYSVEDGTGQIE 67
Query: 99 CSRW-AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W + ++ ++I +YVRV G LK+FQ++RS+++ +RP+ID+NE+ H +E
Sbjct: 68 VRQWLDSSSDDSSKASEIRNNVYVRVLGTLKSFQNRRSISSGHMRPVIDYNEVMFHRLEA 127
Query: 158 IYVQLYNTR 166
++ L TR
Sbjct: 128 VHAHLQVTR 136
>gi|242083306|ref|XP_002442078.1| hypothetical protein SORBIDRAFT_08g009560 [Sorghum bicolor]
gi|241942771|gb|EES15916.1| hypothetical protein SORBIDRAFT_08g009560 [Sorghum bicolor]
Length = 163
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 59 SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKG 118
S S + + ++ + +VG + + F + DG G+I+ +RW +E + E+ ++ G
Sbjct: 3 SQSTESSGLSKVRLVGRMLNEVQHVRDVQFTLHDGAGKIDVNRWENESSDAKEMADVNDG 62
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGG-SSNQPQM 177
YV V G LK FQ KR + AYS+R + DFNEI HF+ CI V L +TR + +++ +
Sbjct: 63 DYVIVNGGLKGFQGKRHIVAYSVRRVTDFNEIPHHFLHCIQVHLDHTRPKAQINASTATL 122
Query: 178 TNSNHLKEYN--AISSNHYSFDEGKSIDQMVLDFLRRPEFL 216
++N ++ +N A + + G SI +V+ PE +
Sbjct: 123 GHTNQVRPFNNQAATFSASGNAVGNSISDLVMSVFNDPEAM 163
>gi|6324017|ref|NP_014087.1| Rfa2p [Saccharomyces cerevisiae S288c]
gi|132475|sp|P26754.1|RFA2_YEAST RecName: Full=Replication factor A protein 2; Short=RF-A protein 2;
AltName: Full=DNA-binding protein BUF1; AltName:
Full=Replication protein A 36 kDa subunit
gi|4314|emb|CAA42421.1| replication factor-A protein 2 [Saccharomyces cerevisiae]
gi|410539|gb|AAB27888.1| BUF1 [Saccharomyces cerevisiae]
gi|1302417|emb|CAA96241.1| RFA2 [Saccharomyces cerevisiae]
gi|151944237|gb|EDN62516.1| replication factor RF-A subunit 2 [Saccharomyces cerevisiae YJM789]
gi|190409276|gb|EDV12541.1| Replication factor-A protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|259149060|emb|CAY82301.1| Rfa2p [Saccharomyces cerevisiae EC1118]
gi|285814355|tpg|DAA10249.1| TPA: Rfa2p [Saccharomyces cerevisiae S288c]
gi|349580640|dbj|GAA25799.1| K7_Rfa2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296861|gb|EIW07962.1| Rfa2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 273
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 39/267 (14%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSK-NRNVRTLLPMTVKQLSELSSNDESSASID-GADV 67
++ GGGF S++ P S S+ N V TL P+T+KQ+ E + + + ++
Sbjct: 11 SSVTGGGFENSESR----PGSGESETNTRVNTLTPVTIKQILESKQDIQDGPFVSHNQEL 66
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-------------- 113
+ + VG+V ++ D I+DGTG+IE +W+ + + N
Sbjct: 67 HHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYGSQVAQ 126
Query: 114 QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN 173
Q G YV+V+G LK F K+++ ++PI FNE+ +H +E I + G
Sbjct: 127 QFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDSFNEVLTHHLEVIKCH----SIASGMMK 182
Query: 174 QPQMTNSNH------LKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRN 225
QP + SN+ +K+ N SS G S Q +L+F ++ AN+ V
Sbjct: 183 QPLESASNNNGQSLFVKDDNDTSS-------GSSPLQRILEFCKKQCEGKDANSFAVPIP 235
Query: 226 VISQQLNLPMDKLMEALESLNENSLVY 252
+ISQ LNL + +L + +Y
Sbjct: 236 LISQSLNLDETTVRNCCTTLTDQGFIY 262
>gi|256269456|gb|EEU04747.1| Rfa2p [Saccharomyces cerevisiae JAY291]
Length = 274
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 39/267 (14%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSK-NRNVRTLLPMTVKQLSELSSNDESSASID-GADV 67
++ GGGF S++ P S S+ N V TL P+T+KQ+ E + + + ++
Sbjct: 12 SSVTGGGFENSESR----PGSGESETNTRVNTLTPVTIKQILESKQDIQDGPFVSHNQEL 67
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-------------- 113
+ + VG+V ++ D I+DGTG+IE +W+ + + N
Sbjct: 68 HHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYGSQVAQ 127
Query: 114 QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN 173
Q G YV+V+G LK F K+++ ++PI FNE+ +H +E I + G
Sbjct: 128 QFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDSFNEVLTHHLEVIKCH----SIASGMMK 183
Query: 174 QPQMTNSNH------LKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRN 225
QP + SN+ +K+ N SS G S Q +L+F ++ AN+ V
Sbjct: 184 QPLESASNNNGQSLFVKDDNDTSS-------GSSPLQRILEFCKKQCEGKDANSFAVPIP 236
Query: 226 VISQQLNLPMDKLMEALESLNENSLVY 252
+ISQ LNL + +L + +Y
Sbjct: 237 LISQSLNLDETTVRNCCTTLTDQGFIY 263
>gi|440790733|gb|ELR12008.1| replication protein A2 family protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 298
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 9/144 (6%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
P S+ V+TL P+TV+QL + ++ + +D ++N IT+VG + ++Q +
Sbjct: 46 PRSAKRSGAIVQTLTPVTVRQLHLATHTHPDDIFKVDDRELNQITLVGQIVNLQVQSTNV 105
Query: 87 IFLIDDGTGRIECSRWAHEQMEFNEVNQISK----GMYVRVYGHLKAFQDKRSLNAYSLR 142
+DDGTG+I W ++ E NQ S+ G YVRV G+L++F D RS+ A+ +
Sbjct: 106 ELEVDDGTGKIGVRMW----LDVEEENQSSRKWDVGSYVRVIGNLRSFMDTRSVLAFRVM 161
Query: 143 PIIDFNEITSHFVECIYVQLYNTR 166
PI ++E+T HF++ I+V L T+
Sbjct: 162 PIEMYDEVTYHFLDVIHVHLAVTK 185
>gi|403417907|emb|CCM04607.1| predicted protein [Fibroporia radiculosa]
Length = 1266
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 23 TTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQD 81
+T P F + + +L P+T+KQL + + + ++ I+ A++ IT+V V +Q
Sbjct: 1003 STSGSPGGQFRRGAALHSLRPVTIKQLIDATQPHSDAEWMIEDAEIGQITIVAQVISIQS 1062
Query: 82 KEPQFIFLIDDGTGRIECSRWAHEQME-FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYS 140
+ ++ +DDGTGR+E W Q E + +++G YVRV G +K F +KR +NA
Sbjct: 1063 QTTNCVYWLDDGTGRMEARHWVDAQEEDQDRWAGVAEGKYVRVMGSVKTFGNKRYINAQH 1122
Query: 141 LRPIIDFNEITSHFVECIYVQLYNTR------------LRGGSSNQPQMTNSNHLKEYNA 188
LR D +E+ H +E + V + RG +N T++ + + +
Sbjct: 1123 LRAASDPHELYFHLLEAMTVTTVMIKGPIPRPSEAGMAPRGAMANGQTSTSAYAAQSHVS 1182
Query: 189 ISSNHYSF--DEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESL 245
S++ Y+ D + I + +L +P + +G+H I++ + + EAL+ L
Sbjct: 1183 ASNSQYAHLPDTQRKIVEFLLS---QP---TSEDGIHVAAIARAIGGQARDISEALDRL 1235
>gi|242048536|ref|XP_002462014.1| hypothetical protein SORBIDRAFT_02g012600 [Sorghum bicolor]
gi|241925391|gb|EER98535.1| hypothetical protein SORBIDRAFT_02g012600 [Sorghum bicolor]
Length = 194
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 71 TVVGIVCDMQDKEPQFI---FLIDDGTGRIECSRWAHEQ---MEFNEVNQISKGMYVRVY 124
TVV +V M +K F + DG G+I+ +RW +E E +VN S G YV V
Sbjct: 40 TVVRLVGRMLNKVQHVKDVQFTLHDGAGKIDVNRWENESSDAKEIADVNFTSDGDYVIVN 99
Query: 125 GHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGG-SSNQPQMTNSNHL 183
G LK FQ KR + AYS+R + DFNEI HF+ CI V L +TR + +++ + ++N +
Sbjct: 100 GGLKGFQGKRHIVAYSVRRVTDFNEIPHHFLHCIQVHLDHTRPKAQINASTATLGHTNQV 159
Query: 184 KEYN--AISSNHYSFDEGKSIDQMVLDFLRRPEFL 216
+ +N A + + G SI +V+ PE +
Sbjct: 160 RPFNNQAATFSASGNAAGNSISDLVMSVFNDPEAM 194
>gi|242072626|ref|XP_002446249.1| hypothetical protein SORBIDRAFT_06g009921 [Sorghum bicolor]
gi|241937432|gb|EES10577.1| hypothetical protein SORBIDRAFT_06g009921 [Sorghum bicolor]
Length = 144
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 88 FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
F + DG G+I+ +RW +E + E+ ++ G YV V G LK FQ KR + AYS+R + DF
Sbjct: 14 FTLHDGAGKIDVNRWENESSDAKEMADVNDGDYVIVNGGLKGFQGKRHIVAYSVRRVTDF 73
Query: 148 NEITSHFVECIYVQLYNTRLRGG-SSNQPQMTNSNHLKEYN--AISSNHYSFDEGKSIDQ 204
NEI HF+ CI V L +TR + +++ + ++N ++ +N A + + G SI
Sbjct: 74 NEIPHHFLHCIQVHLDHTRPKAQINASTATLGHTNQVRPFNNQAATFSASGNAAGNSISD 133
Query: 205 MVLDFLRRPE 214
+V+ PE
Sbjct: 134 LVMSVFNDPE 143
>gi|323335966|gb|EGA77243.1| Rfa2p [Saccharomyces cerevisiae Vin13]
Length = 302
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 39/267 (14%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSK-NRNVRTLLPMTVKQLSELSSNDESSASID-GADV 67
++ GGGF S++ P S S+ N V TL P+T+KQ+ E + + + ++
Sbjct: 40 SSVTGGGFENSESR----PGSGESETNTRVNTLTPVTIKQILESKQDIQDGPFVSHNQEL 95
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-------------- 113
+ + VG+V ++ D I+DGTG+IE +W+ + + N
Sbjct: 96 HHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYGSQVAQ 155
Query: 114 QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN 173
Q G YV+V+G LK F K+++ ++PI FNE+ +H +E I + G
Sbjct: 156 QFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDXFNEVLTHHLEVIKCH----SIASGMMK 211
Query: 174 QPQMTNSNH------LKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRN 225
QP + SN+ +K+ N SS G S Q +L+F ++ AN+ V
Sbjct: 212 QPLESASNNNGQSLFVKDDNDTSS-------GSSPLQRILEFCKKQCEGKDANSFAVPIP 264
Query: 226 VISQQLNLPMDKLMEALESLNENSLVY 252
+ISQ LNL + +L + +Y
Sbjct: 265 LISQSLNLDETTVRNCCTTLTDQGFIY 291
>gi|346471389|gb|AEO35539.1| hypothetical protein [Amblyomma maculatum]
Length = 247
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 27/265 (10%)
Query: 9 AAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVN 68
AA GGGFMP + P + +++ NV +P T+ Q+ + D+ + ++ +V
Sbjct: 2 AAWGDGGGFMPPDSQDTPQRKFA-ARHDNV---VPCTIAQIHMM---DQDTLTVGSLEVQ 54
Query: 69 TITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+++VG+V + + + F +DD TG IE +A E+ + + + +G YVRV G +
Sbjct: 55 YVSLVGLVLSVDQQSTRVNFTLDDRTGPPIEGLIFAQEEEQMRVMRHLVEGSYVRVVGPV 114
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS-----NQPQMTNSNH 182
++ KR L A+ + P+ D NE+T H E +Y N LR G + ++P T+SN
Sbjct: 115 RSVDGKRQLKAFKVFPVTDLNELTLHLAEVVYA---NMALRVGFASTSMKHEPMDTSSN- 170
Query: 183 LKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEA 241
+ + ++ ++ + ++V + +R N G+ N I +L +L + + +
Sbjct: 171 --SFLGGAVSNLGLNQQQ---KLVYEVIRE---CTTNIGISFNEICSKLKSLSNNSVRDV 222
Query: 242 LESL-NENSLVYSIDEFHYKSAVNA 265
+E L NE + ++D+ HYK+ +A
Sbjct: 223 VEFLANEGHIFTTMDDEHYKATDSA 247
>gi|340383369|ref|XP_003390190.1| PREDICTED: replication protein A 32 kDa subunit-like [Amphimedon
queenslandica]
Length = 324
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 130/298 (43%), Gaps = 54/298 (18%)
Query: 12 FAGGGFMPSQ-------------ATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS--ND 56
F GGG+M ++ D KN+ R P+T L ++S
Sbjct: 29 FGGGGYMANEMGGGFTSPGGTTGTPGGKDSKRGGFKNQATR---PVTAAMLHRVTSPPGA 85
Query: 57 ESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRW--AHE--QMEFNE 111
E ID VN I +VG + ++ + ++ IDD TG +E RW A E Q E
Sbjct: 86 EEIYLIDDEQVNQIVLVGEIVEVFESATSVMYKIDDRTGPPVEVRRWINAEEDSQFELER 145
Query: 112 VNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR----- 166
+G+YV++ GH+K F ++R++ + +RPI DFNE+T H E ++ L T+
Sbjct: 146 RAACREGIYVKIVGHIKMFNNQRTITGFMIRPIEDFNEVTHHMAETMFAHLAITKGLKLP 205
Query: 167 -----------LRGGS---SNQPQMTNSNH--LKEYNAISSNHYS--FDEGKS-IDQMVL 207
+ G S S PQ S L +S Y F+ G + + Q VL
Sbjct: 206 EQFSDHQQGNQMGGASSFGSTTPQAGGSGWTPLATSTQMSGTSYGNQFNSGLTLVQQKVL 265
Query: 208 DFLRRPEFLANNNGVHRN-VIS--QQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
+ + ++G+H N +IS + + AL+ L+ VYS IDE H+KS
Sbjct: 266 SVIGNTK---GDHGLHVNDIISSVKTQGFSDASIKTALDFLSNEGHVYSTIDEQHFKS 320
>gi|343887034|gb|AEM65193.1| replication protein A 32kDa subunit [Kryptolebias marmoratus]
Length = 274
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 29/257 (11%)
Query: 28 PSSSFSKNRNVRT----LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKE 83
PS+S + RT ++P TV QL S DE+ + +V+ IT+VGI+
Sbjct: 25 PSASQGGEKKGRTRATQIIPCTVSQLMSASQADEA-FRVGDVEVSQITIVGIIRSTDKSM 83
Query: 84 PQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
+ +DD TG ++ +W + + + G YVRV G+L++FQ+ RS+ A+S+R
Sbjct: 84 TNIQYKVDDMTGAPMDVKQWVDLEDPGVDSTVLPPGTYVRVSGNLRSFQNHRSVVAFSVR 143
Query: 143 PIIDFNEITSHFVECIYVQLYNTR------LRGGSS------NQPQMTNSNHLKEYNAIS 190
P+ D NEITSH +E + + + + GG S ++P +T + Y +S
Sbjct: 144 PLEDMNEITSHMLEVVQAHMVLGKSQSTPGVDGGMSGRVTPVSRPALTVTG--DNYPGVS 201
Query: 191 S-NHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESL-NE 247
Y + ++ VL +R + G+ + Q+L+ + + + +A+E L NE
Sbjct: 202 PVALYGLNANQN---QVLSLIRG---CPDPQGISIQDLKQRLSGINLSIIKQAVEFLSNE 255
Query: 248 NSLVYSIDEFHYKSAVN 264
+ +IDE HYKS N
Sbjct: 256 GHIFSTIDEDHYKSTDN 272
>gi|398391865|ref|XP_003849392.1| hypothetical protein MYCGRDRAFT_95717 [Zymoseptoria tritici IPO323]
gi|339469269|gb|EGP84368.1| hypothetical protein MYCGRDRAFT_95717 [Zymoseptoria tritici IPO323]
Length = 280
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQL--SELSSNDESSASIDGADVNTITVVG 74
FMP + + D S++ TL P+T+KQL + D +D ++ +T +G
Sbjct: 21 FMPG-SQSANDNSATKRTGYGKDTLRPVTIKQLLDAHHPHPDADHFMVDDTEMTQVTFIG 79
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRW----AHEQME-----FNEVNQISKGMYVRVYG 125
+ ++ + + +DDGTG IE W A E E + + +G Y RV+G
Sbjct: 80 QIRNISTQTTNVTYKMDDGTGSIEVKVWIDAEAFEPAEGGGGGGGKQKPVEQG-YARVWG 138
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
LKAF +KR + A ++RPI DFNEI+ H +E V L T+ G N+ Q +N
Sbjct: 139 RLKAFNNKRHVGAINVRPIQDFNEISYHLLEATVVHLQLTKGPPGGGNEGQQPGAN 194
>gi|320170239|gb|EFW47138.1| hypothetical protein CAOG_05082 [Capsaspora owczarzaki ATCC 30864]
Length = 242
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVV 73
G G+M QA + P N + + T++Q+ +++ + ++ +DGA+ + +V
Sbjct: 8 GAGYMQQQAGS-PHGDGQDKGNARAKGITSCTIRQILQMAPSQGNNWRMDGAEFAVVKIV 66
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN--QISKGMYVRVYGHLKAFQ 131
G++ +Q+ +LI+DGT +I F VN + +G+Y R+ G ++ FQ
Sbjct: 67 GVIRSVQEVTSHRTYLIEDGTSQITAK-------AFGPVNNADLREGVYARITGPVREFQ 119
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRL----RGGSSNQP 175
+ RS++ +L PI +F+EIT H +E I L T+ R G + QP
Sbjct: 120 NVRSIHPATLHPITNFDEITHHSLEAILTHLQRTKGSLQDRAGGAGQP 167
>gi|403213317|emb|CCK67819.1| hypothetical protein KNAG_0A01300 [Kazachstania naganishii CBS
8797]
Length = 287
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 28/272 (10%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID-GADVNTITV 72
GGGF S + P S S S R + TL P+T+KQ+ E + + + G +++ I+
Sbjct: 15 GGGF-ESGGDSRPGTSDS-SAVRKMSTLTPVTIKQILESTQEVQDGPFVSHGQELHHISF 72
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------AHEQMEFNEVN---------QI 115
VG+V ++ D ++DG+G+IE +W A + ME + N Q
Sbjct: 73 VGVVRNITDHTSNIYVTVEDGSGQIEVRKWSDDASDMSAPDAMEDSNGNDGVGSQIAQQF 132
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT-RLRGGSSNQ 174
+ G YV+VYG LK F K+++ ++ + FN++ +H +E I +T +L +
Sbjct: 133 TIGTYVKVYGALKEFSGKKNIQYAVIKNVESFNDVLTHHLEAIKWHAISTGKLPDPTGVS 192
Query: 175 PQMTNSNHLKEYNAISSNHYSFD--EGKSI--DQMVLDFLRRP--EFLANNNGVHRNVIS 228
P N+ EGK + Q+VLDF ++ AN+ V +IS
Sbjct: 193 PLGDNATSAASGGNSGGXXXXXXXAEGKDVAPTQLVLDFCKQQCRGKDANSFAVPMQLIS 252
Query: 229 QQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
Q LN+ + + +L E +Y + D+ H+
Sbjct: 253 QNLNIDEETVRNVCGTLTEQGFIYPTFDDTHF 284
>gi|345570658|gb|EGX53479.1| hypothetical protein AOL_s00006g345 [Arthrobotrys oligospora ATCC
24927]
Length = 284
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCD 78
SQ T P S +KN TL P+T+KQ L + +D+++ ID ++ +T V +
Sbjct: 18 SQGGTQATPGRSAAKN----TLRPVTIKQILDAQTPHDDNTFVIDDVEIGHVTFVAQILS 73
Query: 79 MQDKEPQFIFLIDDGTGRIECSRWAHEQ---MEFNEVNQISK------GMYVRVYGHLKA 129
+ D+E + ++DGTG IE + E+ ++ + N+ S+ Y RV G +K
Sbjct: 74 ISDQETNSTYKMEDGTGSIEVKFFRGERNSMVDDDGENESSREAGLQINTYARVLGSIKQ 133
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
F +KR++ +S++P+ DFNE+ HF+E V L+ TR
Sbjct: 134 FNNKRNITTHSVKPVTDFNEVQCHFLEVTAVHLHFTR 170
>gi|354472349|ref|XP_003498402.1| PREDICTED: replication protein A 32 kDa subunit-like [Cricetulus
griseus]
Length = 320
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 125/244 (51%), Gaps = 22/244 (9%)
Query: 30 SSFSKNRNVRT--LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
S K VR+ ++P T+ QL + DE I +++ +T+VGI+ + +
Sbjct: 83 SQAEKKSRVRSQHIVPCTISQLLSATLTDEV-FKIGNVEISQVTIVGIIRHAEKAPTNIV 141
Query: 88 FLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P+ D
Sbjct: 142 YKIDDMTAAPMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLED 201
Query: 147 FNEITSHFVECIYVQLY----NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
NE T+H +E + + N +L S+ +P ++NS + E S N+ G ++
Sbjct: 202 MNEFTAHILEVVNSHMMLSKSNNQL---STGRPSISNSG-MGEPGNFSGNNLMPANGLTV 257
Query: 203 DQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEF 257
Q VL+ ++ RPE L +++ +Q ++P+ + +A++ L NE + ++D+
Sbjct: 258 VQNQVLNLIKACPRPEGLN-----FQDLRNQLQHMPVASIKQAVDFLCNEGHIYSTVDDD 312
Query: 258 HYKS 261
H+KS
Sbjct: 313 HFKS 316
>gi|166092119|gb|ABY82099.1| replication protein A2, 32kDa (predicted) [Callithrix jacchus]
Length = 270
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 121/244 (49%), Gaps = 15/244 (6%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PGPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHTEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + Y +V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAPPMDVRQWVDTDDASSENTVVPPETYWKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ G S ++ + E N + G ++
Sbjct: 149 LEDMNEFTAHILEVINAHMILSKASGQPSAGKAPISNPGMSEAGNFGGNSFMPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-IDEF 257
Q VL+ ++ RPE G++ + QL ++ + + +A++ L+ +YS +D+
Sbjct: 209 QNQVLNLIKACPRPE------GLNFQELRNQLKHMSVPSIKQAVDFLSNEGHIYSTVDDD 262
Query: 258 HYKS 261
H+KS
Sbjct: 263 HFKS 266
>gi|321258174|ref|XP_003193838.1| hypothetical protein CGB_D7370C [Cryptococcus gattii WM276]
gi|317460308|gb|ADV22051.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 242
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 39 RTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+T+ P+TVKQ+ E + ++ +IDG DV + +VG V +M + I DGTG I
Sbjct: 40 QTIRPVTVKQILEAQQVHPDADFTIDGVDVAQVLLVGSVRNMSTTATNVSYEIGDGTGYI 99
Query: 98 ECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
+ W + + + + YV + G +K F KR ++A +RPI D NE+ H ++
Sbjct: 100 DARVWLDSADDDSGKTTGVEQDHYVGLMGTIKVFGGKRHVSATHIRPITDANEVQHHLLK 159
Query: 157 CIYVQLYNTRLRGGS-SNQPQMTNSNHLKEYNA----ISSNHYSFDEGKSIDQMVLDFLR 211
+YV L LRGG+ N P+ + +YNA +++ ++ + + + +L+ +
Sbjct: 160 ALYVSLI---LRGGAPGNAPKAAGTR--DDYNAGATTGATDQSAWSHLEPLQRRILEVMS 214
Query: 212 RPEFLANNNGVHRNVISQQLN 232
E N++GVH I + LN
Sbjct: 215 S-EGQGNDDGVHVTHIIKFLN 234
>gi|402082744|gb|EJT77762.1| replication protein A 32 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 278
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 14/224 (6%)
Query: 40 TLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQL S + + +DG + +T VG V + + + IDDGTG I+
Sbjct: 47 SLRPVTIKQLYSTEEAYSGAELVLDGNPLAQVTFVGQVRQVNPQATNITYRIDDGTGSID 106
Query: 99 CSRWAHEQ----MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
+W Q + E++ + +VRV+G LK QD+R + A +R + DFNE++ H
Sbjct: 107 VKKWIDSQSMTDTDPAELHPLDS--FVRVWGKLKHLQDRRHVGATFMRNVDDFNEVSYHM 164
Query: 155 VECIYVQLY--NTRLRGGSSNQPQMTNSNHLKEY---NAISSNHYSFDEGKSIDQMVLDF 209
+E YV LY N + +S +S + Y + + Q + +
Sbjct: 165 LEAAYVHLYFANAKSGAEASAGGGGDDSMFVDSYGDSHGGGGGAAKAKGCSANAQRIFGY 224
Query: 210 LRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
++ A N+G+ +VIS+ + +P++ ++ A + L L+Y+
Sbjct: 225 MQNQA--AGNDGMEAHVISKGIGMPVNTVLAAADELVTQGLIYT 266
>gi|429961492|gb|ELA41037.1| hypothetical protein VICG_01919 [Vittaforma corneae ATCC 50505]
Length = 225
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 38 VRTLLPMTVKQLSELSSNDESSASI-DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
V+TL ++ KQ++ +S++D SS I D +V+ + V G V + FIF +DD TG+
Sbjct: 20 VKTLRCLSNKQINSISTDDSSSVPIVDRFEVSNVQVCGYVTSFKKISTGFIFEVDDTTGK 79
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
IEC+ W + E +QI +G +++ G +K F K++LN ++ +D N +T H
Sbjct: 80 IECAFWTNGSFEELSADQIKEGALLKLTGSIKIFASKKTLNVSTI-CTVDGNALTYHLTS 138
Query: 157 CIYVQLYNT-RLRGGSSNQPQM 177
C+Y L+ T +L +P +
Sbjct: 139 CLYQHLFFTNKLERKDERRPSI 160
>gi|62900928|sp|Q5RC43.1|RFA2_PONAB RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2
gi|55727828|emb|CAH90667.1| hypothetical protein [Pongo abelii]
Length = 270
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSVKQAMDFLSNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|332245173|ref|XP_003271737.1| PREDICTED: replication protein A 32 kDa subunit [Nomascus
leucogenys]
gi|426328575|ref|XP_004025327.1| PREDICTED: replication protein A 32 kDa subunit [Gorilla gorilla
gorilla]
Length = 270
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|254572660|ref|XP_002493439.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|238033238|emb|CAY71260.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|328354736|emb|CCA41133.1| Replication factor A protein 2 [Komagataella pastoris CBS 7435]
Length = 251
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITV 72
GGGF + D S K + T+ P+T+KQ+++ + + ++G ++N ++
Sbjct: 15 GGGFT-TYNNNDGDGQGSQGKTQQRNTIKPVTIKQINDSKTIISDGEFVVNGVELNMVSF 73
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQD 132
VGI+ ++ D I+DGTG ++ +W E + +E N G YV V G LK F +
Sbjct: 74 VGIIRNVNDNTSSLTITIEDGTGSLDVRKWVDEGSDPSE-NNYPLGQYVYVTGLLKEFNE 132
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
K+SL ++ PI D+N++T H++ I V +
Sbjct: 133 KKSLQQATINPIEDYNQVTYHYLSAIKVHV 162
>gi|397515792|ref|XP_003828127.1| PREDICTED: replication protein A 32 kDa subunit [Pan paniscus]
Length = 270
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|332808182|ref|XP_003307967.1| PREDICTED: replication protein A 32 kDa subunit isoform 1 [Pan
troglodytes]
gi|410250836|gb|JAA13385.1| replication protein A2, 32kDa [Pan troglodytes]
gi|410330465|gb|JAA34179.1| replication protein A2, 32kDa [Pan troglodytes]
Length = 269
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 29 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 87
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 88 NIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 147
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 148 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVA 207
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 208 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDH 262
Query: 259 YKS 261
+KS
Sbjct: 263 FKS 265
>gi|255717472|ref|XP_002555017.1| KLTH0F19118p [Lachancea thermotolerans]
gi|238936400|emb|CAR24580.1| KLTH0F19118p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVN 68
+ +GGGF SQ++ P+S + + TL P+T+KQ+ E + ++ +++
Sbjct: 11 STVSGGGFDNSQSSG--RPNSGNGGSGSSSTLTPVTIKQVQESKQIVQDGPFVVNNLELH 68
Query: 69 TITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAH-----------EQMEFNEVNQISK 117
++ VG+V ++ D I+DGTG+IE +W+ EQ + E +Q+++
Sbjct: 69 HVSFVGVVRNVVDNTSNINLTIEDGTGQIEVRKWSDDSNDMANAAQDEQPDAAESSQVAQ 128
Query: 118 ----GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI-YVQLYNTRLRGGSS 172
G YVRV+G L+ F K+++ ++PI +FNE+ +H++E + + + N +L +
Sbjct: 129 MYEVGTYVRVFGALREFSGKKNVQFAVIKPIDNFNEVITHYLEAMKWHAIANGKLESPVN 188
Query: 173 NQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFL--RRPEFLANNNGVHRNVISQQ 230
QP NS E + S E K+ +L+F + A++ VH +I+Q
Sbjct: 189 LQP---NSEQTGEEQNLFVQDNSASEPKTALHKILEFCTAQCEGKDASSFAVHTKLIAQS 245
Query: 231 LNLPMDKLMEALESLNENSLVY 252
L L + ++L + +Y
Sbjct: 246 LALSEPDVKMYCQTLVDQGFIY 267
>gi|347543774|ref|NP_001125362.2| replication protein A 32 kDa subunit [Pongo abelii]
Length = 343
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 103 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 161
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 162 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 221
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 222 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVA 281
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 282 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSVKQAMDFLSNEGHIYSTVDDDH 336
Query: 259 YKS 261
+KS
Sbjct: 337 FKS 339
>gi|4506585|ref|NP_002937.1| replication protein A 32 kDa subunit [Homo sapiens]
gi|402853597|ref|XP_003891479.1| PREDICTED: replication protein A 32 kDa subunit [Papio anubis]
gi|402910515|ref|XP_003917920.1| PREDICTED: replication protein A 32 kDa subunit-like [Papio anubis]
gi|132474|sp|P15927.1|RFA2_HUMAN RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2; AltName: Full=Replication protein A 34 kDa
subunit; Short=RP-A p34
gi|158429426|pdb|2PI2|A Chain A, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|158429427|pdb|2PI2|B Chain B, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|158429428|pdb|2PI2|C Chain C, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|158429429|pdb|2PI2|D Chain D, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|161761149|pdb|2Z6K|A Chain A, Crystal Structure Of Full-Length Human Rpa1432 HETERODIMER
gi|161761150|pdb|2Z6K|B Chain B, Crystal Structure Of Full-Length Human Rpa1432 HETERODIMER
gi|337350|gb|AAA36560.1| replication protein A [Homo sapiens]
gi|12804447|gb|AAH01630.1| Replication protein A2, 32kDa [Homo sapiens]
gi|15082484|gb|AAH12157.1| Replication protein A2, 32kDa [Homo sapiens]
gi|18204222|gb|AAH21257.1| Replication protein A2, 32kDa [Homo sapiens]
gi|47496643|emb|CAG29344.1| RPA2 [Homo sapiens]
gi|62511903|gb|AAX84514.1| replication protein A2, 32kDa [Homo sapiens]
gi|119628129|gb|EAX07724.1| replication protein A2, 32kDa [Homo sapiens]
gi|123983074|gb|ABM83278.1| replication protein A2, 32kDa [synthetic construct]
gi|123998291|gb|ABM86747.1| replication protein A2, 32kDa [synthetic construct]
gi|261861606|dbj|BAI47325.1| replication protein A2, 32kDa [synthetic construct]
Length = 270
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|300175582|emb|CBK20893.2| unnamed protein product [Blastocystis hominis]
Length = 225
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 12 FAGGGFMP--SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNT 69
+ GG + P + T P S S R ++P+ V + L S+ E + + ++T
Sbjct: 2 YGGGAYNPNPTSYTGTGGPISP-SHPAASRPIIPIVVSMIGRLISHSEGNFQYFDSSIST 60
Query: 70 ITVVGIVCDM-QDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLK 128
I+V GI+C++ Q + F I DGTG I+ + + N+ Q + YVRV G L+
Sbjct: 61 ISVCGIICNIKQGSSERKSFTIHDGTGAIQATFYVQ-----NDNQQFATDGYVRVIGTLR 115
Query: 129 AFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY 163
FQDK ++ Y PI FNEIT H++ CI LY
Sbjct: 116 QFQDKVEISGYHCDPISSFNEITIHYLSCIQSYLY 150
>gi|189066545|dbj|BAG35795.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSESGNFGGNSFMPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|386781045|ref|NP_001247563.1| replication protein A 32 kDa subunit [Macaca mulatta]
gi|380815390|gb|AFE79569.1| replication protein A 32 kDa subunit [Macaca mulatta]
gi|383420569|gb|AFH33498.1| replication protein A 32 kDa subunit [Macaca mulatta]
gi|384948666|gb|AFI37938.1| replication protein A 32 kDa subunit [Macaca mulatta]
Length = 270
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 13/243 (5%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSID 203
+ D NE T+H +E I + ++ S ++ + E N + G ++
Sbjct: 149 LEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFLPANGLTVA 208
Query: 204 Q-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H
Sbjct: 209 QNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDH 263
Query: 259 YKS 261
+KS
Sbjct: 264 FKS 266
>gi|431891188|gb|ELK02065.1| Replication protein A 32 kDa subunit, partial [Pteropus alecto]
Length = 266
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 6 FDGAAAF--AGGGFMPSQATTVPDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASI 62
F GA + + GGF P PS + K+R+ + ++P T+ QL + DE I
Sbjct: 10 FGGAGGYTQSPGGF------GSPAPSQAEKKSRSRAQHIVPCTISQLLSATLVDEV-FRI 62
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
+++ +T+VGI+ + ++ IDD T ++ +W E + YV
Sbjct: 63 GNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYV 122
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + + + S ++
Sbjct: 123 KVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILEVVNAHMTLNKANSQPSRGRASISNP 182
Query: 182 HLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMD 236
+ E N + G ++ Q VL+ ++ RPE G++ + + QL ++ +
Sbjct: 183 GMGEAGNFGGNSFMPVNGLTVAQNQVLNLIKACPRPE------GLNFHELKNQLQHMTVV 236
Query: 237 KLMEALESLNENSLVYS-IDEFHYKS 261
+ +A++ L+ +YS +D+ H+KS
Sbjct: 237 SIKQAVDFLSNEGHIYSTVDDDHFKS 262
>gi|410077445|ref|XP_003956304.1| hypothetical protein KAFR_0C01760 [Kazachstania africana CBS 2517]
gi|372462888|emb|CCF57169.1| hypothetical protein KAFR_0C01760 [Kazachstania africana CBS 2517]
Length = 283
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 23/264 (8%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVN 68
++ GGGF S + + S++ + N TL P+T+KQ L+ + + +G +++
Sbjct: 11 SSITGGGFEHSDNRSNTNDSTNNTSRPN--TLTPVTIKQILNSVQEIQDGPFVTNGQELH 68
Query: 69 TITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWA--------------HEQMEFNE--V 112
++ VG++ ++ D I+DGTG+I+ +W+ ++ E+N
Sbjct: 69 YVSFVGVIRNITDHATNIFITIEDGTGQIDVKKWSDDATDMTASQENSDQQEKEYNSQVA 128
Query: 113 NQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI-YVQLYNTRLRGGS 171
Q G YV VYG LK F K+++ ++ + FNEI +H +E I + + +L S
Sbjct: 129 QQYQVGTYVTVYGALKEFGGKKNIQYAVIKNVDSFNEIIAHHLEVIKWYAIATGKLPDPS 188
Query: 172 SNQPQMTNS-NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRNVIS 228
NQ Q N+ N + + N + + S Q +L+F + AN+ + +I+
Sbjct: 189 HNQEQYNNNGNSEGQSLFVQENEATDNSNGSPLQRILEFCKTQCEGKDANSFAIPIPLIA 248
Query: 229 QQLNLPMDKLMEALESLNENSLVY 252
Q LNL D + +L E +Y
Sbjct: 249 QSLNLNEDTVRTCCSTLTEQGFIY 272
>gi|392574533|gb|EIW67669.1| hypothetical protein TREMEDRAFT_18062, partial [Tremella
mesenterica DSM 1558]
Length = 250
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
S K N T+ P+TVKQ+ + S + +S +IDG DV + +VG V +
Sbjct: 23 SPGGKKKSNTSTIRPVTVKQILDASQPHPDSDFAIDGYDVGQVLLVGSVRAVSKSATNVQ 82
Query: 88 FLIDDGTGRIECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
I DGTG I+ W + E + I + YV + G +K F KR ++A +R I D
Sbjct: 83 VEIGDGTGYIDARLWLDSAEDESEKAKGIEQDKYVGIMGSIKLFGGKRHISASHIRLIED 142
Query: 147 FNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNA---ISSNHYSFDEGKSID 203
NE+ +H ++ +YV L T G++ Q N+ +YNA +++ + +
Sbjct: 143 LNEVYNHLLKALYVSL--TLRNPGTTGQAHAHAPNN--DYNAPVGMTTTESPYANLPPLQ 198
Query: 204 QMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS 253
+ +++ + + E + +G+H + +S+ + + +MEA+E+L ++YS
Sbjct: 199 RKIMEIVSKEE---SEDGMHVSAVSRSMTGTKGEDVMEAIENLMGEGMLYS 246
>gi|310795122|gb|EFQ30583.1| hypothetical protein GLRG_05727 [Glomerella graminicola M1.001]
Length = 281
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 22/231 (9%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ+ + + + IDG V +T V + + + +DDGTG IE
Sbjct: 44 SLRPVTIKQIIDAEEAYPGADFKIDGVTVTQVTFVAQIRQISPQPTNITLKLDDGTGLIE 103
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W + + + +VRV+G LK+F KR + A+ +RP+ DF+E+ H +E
Sbjct: 104 VKKWVDTDKKDDADANLELEGHVRVWGRLKSFNGKRHVGAHFIRPVTDFDEVNYHLLEAT 163
Query: 159 YVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHY-----------SFDEGK-----SI 202
YV LY + G N + + Y S GK +
Sbjct: 164 YVHLYFAK---GPLNGAPGGAAAGGDGMFVDGGDSYGAGAGAPTGGNSAQAGKLRGCSAA 220
Query: 203 DQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
Q + +F+ + N GVH N IS L + ++ A + L L+Y+
Sbjct: 221 AQKMFNFINN--YPGGNEGVHLNQISSGAGLSVRDVIGASDELLGQGLIYT 269
>gi|344245067|gb|EGW01171.1| Replication protein A 32 kDa subunit [Cricetulus griseus]
Length = 248
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 14/229 (6%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE I +++ +T+VGI+ + ++ IDD T ++
Sbjct: 24 IVPCTISQLLSATLTDEV-FKIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 82
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
+W E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E +
Sbjct: 83 RQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVN 142
Query: 160 VQLYNTRLRGG-SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPE 214
+ ++ S+ +P ++NS + E S N+ G ++ Q VL+ ++ RPE
Sbjct: 143 SHMMLSKSNNQLSTGRPSISNSG-MGEPGNFSGNNLMPANGLTVVQNQVLNLIKACPRPE 201
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEFHYKSA 262
L +++ +Q ++P+ + +A++ L NE + ++D+ H+KS
Sbjct: 202 GLN-----FQDLRNQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFKST 245
>gi|427787439|gb|JAA59171.1| Putative replication protein a 32 kda subunit [Rhipicephalus
pulchellus]
Length = 248
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 138/268 (51%), Gaps = 32/268 (11%)
Query: 9 AAAFAGGGFMP--SQATTVPDPSSSF-SKNRNVRTLLPMTVKQLSELSSNDESSASIDGA 65
AA GGGFMP SQ T P F S++ NV +P T+ Q+ + + S +I
Sbjct: 2 AAWGDGGGFMPPDSQQDT---PQRKFASRHDNV---VPCTIAQIHMMG---QDSLTIGDL 52
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVY 124
+V +++VG+V + + + F +DD TG IE +A E+ + ++ + +G YVRV
Sbjct: 53 EVQYVSLVGLVTSVDQQSTRVNFTLDDRTGPPIEGLIFAQEEEQLRVLSHLVEGSYVRVV 112
Query: 125 GHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS-----NQPQMTN 179
G +++ + KR L A+ + P+ D NE+T H E ++ N LR G + ++P T+
Sbjct: 113 GPVRSAEGKRQLKAFKVFPVTDLNELTLHLAEVVHA---NMALRVGFTPSSVKHEPMDTS 169
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKL 238
+N + ++ + ++ + ++V + +R N G+ + I +L ++ + +
Sbjct: 170 TN---SFLGAAAGNLGLNQQQ---KLVYEVIRE---CTTNIGIGFDEICSRLKSMNKNTI 220
Query: 239 MEALESL-NENSLVYSIDEFHYKSAVNA 265
+ +E L NE + ++D+ HYK+ +A
Sbjct: 221 RDVVEFLANEGHIFTTMDDEHYKATDSA 248
>gi|449488922|ref|XP_002190972.2| PREDICTED: replication protein A 32 kDa subunit, partial
[Taeniopygia guttata]
Length = 259
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 15/262 (5%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASIDGAD 66
G A GG P + K R+ + ++P TV QL DE+ D +
Sbjct: 1 GGAGLPGGYTHSPGGFGSPAGGQAEKKQRSRSQNIVPCTVSQLLAAEQVDETFRICD-VE 59
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYG 125
++ +TVVGIV + ++ +DD T ++ +W E + G YV+V G
Sbjct: 60 ISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGGENVVVPPGTYVKVAG 119
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKE 185
HL++FQ+K+SL A+ + P+ + NE T+H +E + + + +S PQ +S + +
Sbjct: 120 HLRSFQNKKSLVAFKIMPLENMNEFTTHILEIVNAHMILRKNLMSASRGPQSFSSTGISD 179
Query: 186 YNAISSNHYSFDEGKSIDQ-MVLDFLRR---PEFLANNNGVHRNVISQQL-NLPMDKLME 240
G + Q VL+ ++ PE G+ + QL N+ M + +
Sbjct: 180 MGGYGGGGSLPVNGLTAHQSQVLNLIKSCHVPE------GMSLQDLKLQLHNMSMSTIKQ 233
Query: 241 ALESLNENSLVYS-IDEFHYKS 261
A+E L+ +YS +D+ HYKS
Sbjct: 234 AVEFLSSEGHIYSTVDDDHYKS 255
>gi|410966579|ref|XP_003989808.1| PREDICTED: replication protein A 32 kDa subunit [Felis catus]
Length = 270
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 129/256 (50%), Gaps = 23/256 (8%)
Query: 15 GGFMPSQATTVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVV 73
GGF +P PS + K+R + ++P T+ QL + DE I +++ +T+V
Sbjct: 25 GGF------GMPTPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGKVEISQVTIV 77
Query: 74 GIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQD 132
GI+ + ++ +DD T ++ +W +E + YV+V GHL++FQ+
Sbjct: 78 GIIRHAEKAPTNIVYKVDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQN 137
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR-----LRGGSS-NQPQMTNSNHLKEY 186
K+SL A+ + P+ D NE T+H +E + + ++ L G ++ + P M + +
Sbjct: 138 KKSLVAFKIMPLEDMNEFTTHILEVVNAHMILSKANSQPLAGRATISNPGMGEAGNFGGN 197
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+AI +N + + + + ++ RPE L +++ +Q ++ + + +A++ L+
Sbjct: 198 SAIPANGLTVAQNQVLS--LIKACPRPEGLN-----FQDLKNQLQHMSVASIKQAVDFLS 250
Query: 247 ENSLVYS-IDEFHYKS 261
+YS +D+ H+KS
Sbjct: 251 NEGHIYSTVDDDHFKS 266
>gi|349732264|ref|NP_001231871.1| replication protein A 32 kDa subunit [Sus scrofa]
Length = 270
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PTPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FKIGNVEISQVTIVGIIRHAEKAAT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLY----NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG 199
+ D NE T+H +E + + N++L G + ++N + E + N + G
Sbjct: 149 LEDMNEFTTHILEVVNAHMLLNKSNSQLLAG---RVPVSNPG-MGEVGSFGGNSFMPANG 204
Query: 200 KSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-I 254
++ Q VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +
Sbjct: 205 LTVAQNQVLNLIKACPRPEGLN-----FQDLKNQLQHMSVASIKQAVDFLSNEGHIYSTV 259
Query: 255 DEFHYKS 261
D+ H+KS
Sbjct: 260 DDDHFKS 266
>gi|348526085|ref|XP_003450551.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 278
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 32/274 (11%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRT--LLPMTVKQLSELSSNDESSASIDGADV 67
++ AGG P S K R ++P TV QL S DES + DV
Sbjct: 10 SSMAGGYTQSPGGFASPALSQGGEKKGRTRANQIIPCTVSQLMSASQADES-FRVGDVDV 68
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGH 126
+T+VG++ + +DD TG ++ +W + + + + G YV+V G+
Sbjct: 69 AQVTIVGVIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDQSVDSTVLPPGTYVKVSGN 128
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS------------NQ 174
L++FQ+ RS+ A+S+RP+ D NEITSH +E + + ++ + S ++
Sbjct: 129 LRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHMALSKPQTMSGAGGGMSSSVMPMSR 188
Query: 175 PQM----TNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR-PEFLANNNGVHRNVISQ 229
P M N N +++N S ++ + VL +R PE G+ + +
Sbjct: 189 PTMGGMDGNVGGYAGANDMANNGLSANQNQ-----VLCLIRSCPE----PQGISIQELKK 239
Query: 230 QL-NLPMDKLMEALESL-NENSLVYSIDEFHYKS 261
+L ++ M + +A+E L NE + +IDE HYKS
Sbjct: 240 RLGSMSMAVIKQAVEFLSNEGHIFSTIDEDHYKS 273
>gi|426221856|ref|XP_004005122.1| PREDICTED: replication protein A 32 kDa subunit [Ovis aries]
Length = 270
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 23/275 (8%)
Query: 1 MYSGEFDG--AAAFAG-GGFMPSQAT-TVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSN 55
M+S F+ ++F G GG+ S P S + K+R + ++P T+ QL +
Sbjct: 1 MWSSGFESYSTSSFGGTGGYTQSPGGFGSPTASQAEKKSRARAQHIVPCTISQLLSATLV 60
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQ 114
DE I +++ +T+VGI+ + + ++ IDD T ++ +W E
Sbjct: 61 DEV-FRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASGENTV 119
Query: 115 ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQ 174
+ YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + + ++ S
Sbjct: 120 VPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAG 179
Query: 175 PQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFL----ANNNGVHRNV 226
++ + E N+++ G ++ Q VL+ ++ RPE L N H +V
Sbjct: 180 RAPISNPGMGEAGNFGGNNFTPANGLTVAQNQVLNLIKACPRPEGLNFQDLKNQLQHMSV 239
Query: 227 ISQQLNLPMDKLMEALESLNENSLVYSIDEFHYKS 261
S + L +D L NE + ++D+ H+KS
Sbjct: 240 AS--IKLAVDFLS------NEGHIYSTVDDDHFKS 266
>gi|348526087|ref|XP_003450552.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 293
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 32/274 (11%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRT--LLPMTVKQLSELSSNDESSASIDGADV 67
++ AGG P S K R ++P TV QL S DES + DV
Sbjct: 25 SSMAGGYTQSPGGFASPALSQGGEKKGRTRANQIIPCTVSQLMSASQADES-FRVGDVDV 83
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGH 126
+T+VG++ + +DD TG ++ +W + + + + G YV+V G+
Sbjct: 84 AQVTIVGVIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDQSVDSTVLPPGTYVKVSGN 143
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS------------NQ 174
L++FQ+ RS+ A+S+RP+ D NEITSH +E + + ++ + S ++
Sbjct: 144 LRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHMALSKPQTMSGAGGGMSSSVMPMSR 203
Query: 175 PQM----TNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR-PEFLANNNGVHRNVISQ 229
P M N N +++N S ++ + VL +R PE G+ + +
Sbjct: 204 PTMGGMDGNVGGYAGANDMANNGLSANQNQ-----VLCLIRSCPE----PQGISIQELKK 254
Query: 230 QL-NLPMDKLMEALESL-NENSLVYSIDEFHYKS 261
+L ++ M + +A+E L NE + +IDE HYKS
Sbjct: 255 RLGSMSMAVIKQAVEFLSNEGHIFSTIDEDHYKS 288
>gi|327288390|ref|XP_003228909.1| PREDICTED: replication protein A 32 kDa subunit-like [Anolis
carolinensis]
Length = 268
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 20/255 (7%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF AT D S S+++N+ +P TV QL D++ +D +++ + +VG
Sbjct: 24 GGFASPSATQ--DEKKSRSRSQNI---VPCTVSQLLSAEQVDDTFRVLD-VELSQVLIVG 77
Query: 75 IVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
I+ + ++ +DD + ++ +W E N+ + G YV+V GHL++FQ+K
Sbjct: 78 IIRQAEKAPTNILYKVDDMSASPMDVRQWVDTDEEGNDNVVVPPGTYVKVAGHLRSFQNK 137
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS--NQPQMTNSNHLKEYNAISS 191
+SL A+ + P+ D NE+T+H +E + + LR N + ++ ++ +
Sbjct: 138 KSLVAFKIMPLEDMNELTTHLLEVVNAHMI---LRHAHKFVNMSEPSSVTGMESTSTYEG 194
Query: 192 NHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL---NLPMDKLMEALESLNEN 248
N+ G ++ Q L+ + ++ G+ + +L NLP L +A+E L+
Sbjct: 195 NNAMPSGGLTLHQT--QILKLIQNCTSSEGISLEDLKNRLPSINLP--TLKKAVEFLSSE 250
Query: 249 SLVYS-IDEFHYKSA 262
+YS ID+ H+KS
Sbjct: 251 GHIYSTIDDEHFKST 265
>gi|55742354|ref|NP_001006795.1| replication protein A2, 32kDa [Xenopus (Silurana) tropicalis]
gi|50370153|gb|AAH76661.1| replication protein A2, 32kDa [Xenopus (Silurana) tropicalis]
Length = 275
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 10/243 (4%)
Query: 26 PDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P P+ K+R+ + ++P TV QL + NDE I A+++ +T+VGIV +
Sbjct: 32 PAPTQGEKKSRSRSQQIVPCTVSQLLSATQNDEM-FRIGEAELSQVTIVGIVRHAEKAPT 90
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ +DD T ++ +W E + G YV+V GHL++FQ+K+S+ A+ + P
Sbjct: 91 NILYKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRSFQNKKSVVAFKIAP 150
Query: 144 IIDFNEITSHFVECIYVQLY---NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGK 200
+ D NE SH +E ++ + GG S T A S + + G
Sbjct: 151 VDDMNEFVSHMLEVVHAHMTMNSQGAPSGGGSAVALNTPGRLGDSGGAFSGGNDNATNGL 210
Query: 201 SIDQ-MVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFH 258
+ Q +L+ ++ F N + ++ + ++ + +A++ L+ +YS +D+ H
Sbjct: 211 TPHQSQILNLIK--SFKGNEGMAFEELKNRLHGMNVNTIRQAVDFLSNEGHIYSTVDDEH 268
Query: 259 YKS 261
YKS
Sbjct: 269 YKS 271
>gi|226372612|gb|ACO51931.1| Replication protein A 32 kDa subunit [Rana catesbeiana]
Length = 273
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 125/247 (50%), Gaps = 17/247 (6%)
Query: 26 PDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P P+ K+R+ + ++P TV QL + +DE I +++ +T+VGIV +
Sbjct: 31 PAPTQGEKKSRSRTQQIVPCTVSQLLSATQSDEL-FKIGEVELSQVTIVGIVRHAEKAPT 89
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ +DD T ++ +W E + G YV+V GHL++FQ+K+S+ A+ + P
Sbjct: 90 NILYKVDDMTAAPMDVRQWVDTDEASCESVVVPPGSYVKVSGHLRSFQNKKSVVAFKIAP 149
Query: 144 IIDFNEITSHFVECIYVQL-YNTRLRGGSS----NQPQMTNSNHLKEYNAISSNHYSFDE 198
+ D NE SH +E I+ + N + GG S + P +S+ ++ + H +
Sbjct: 150 VEDMNEFVSHMLEVIHSHMSLNAQPGGGGSSLTLSTPGRASSDTGGSFSGGNDMHTN--- 206
Query: 199 GKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS-ID 255
G + Q +L+ +R + G+ + +L+ + ++ + +ALE L+ +YS +D
Sbjct: 207 GLTPHQSQILNLIRS---CKGSEGMGFEDLKSRLHGMNVNTIKQALEFLSNEGHIYSTVD 263
Query: 256 EFHYKSA 262
+ HYKS
Sbjct: 264 DDHYKST 270
>gi|344287472|ref|XP_003415477.1| PREDICTED: replication protein A 32 kDa subunit-like [Loxodonta
africana]
Length = 270
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 125/248 (50%), Gaps = 23/248 (9%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P P+ + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PTPTQAEKKSRARAQHIVPCTISQLLSATLVDEV-FKIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKIDDMTAAPMDVRQWVDTDDPSGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQM----TNSNHLKEYNAISSNHYSFDEG 199
+ D NE T+H +E + + ++ S+NQP + ++ + E +N + G
Sbjct: 149 LEDMNEFTAHILEVVNAHMMLSK----SNNQPSVGRAPISNPGMGEAGNFGANSFIPVNG 204
Query: 200 KSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS- 253
++ Q VL+ ++ RPE G++ + + QL + + +A++ L+ +YS
Sbjct: 205 LTVAQNQVLNLIKACPRPE------GLNFDDLKTQLQYMSAVSIKQAVDFLSNEGHIYST 258
Query: 254 IDEFHYKS 261
+D+ H+KS
Sbjct: 259 VDDDHFKS 266
>gi|449680782|ref|XP_002161880.2| PREDICTED: replication protein A 32 kDa subunit-like [Hydra
magnipapillata]
Length = 267
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 2 YSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSA 60
Y G F G GGFM + SS KNR+ +TLLP+T + N E
Sbjct: 3 YQG-FHGNYQGGDGGFMSPGVGSPAIDSSQKKKNRS-QTLLPITAAIFHKAEYNSTEDVF 60
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRW--AHEQMEFNEVNQISK 117
D D++ +T+VG++ ++Q+ + IDD TG + +W A + + + ++ +
Sbjct: 61 RHDDIDIHQVTIVGVIREVQEAATNISYKIDDMTGDLVSVRKWIDAEDPSDNLKRSECRE 120
Query: 118 GMYVRVYGHLKAFQDK--RSLNAYSLRPIIDFNEITSHFVECIYVQL 162
YVRV G++K+F D RS+ A+SL PI DF+EI+ HF++ IY L
Sbjct: 121 DTYVRVVGNMKSFNDGQMRSVMAFSLVPIKDFDEISFHFLDVIYANL 167
>gi|348571074|ref|XP_003471321.1| PREDICTED: replication protein A 32 kDa subunit-like [Cavia
porcellus]
Length = 270
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 124/258 (48%), Gaps = 25/258 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF A+ S + S+N ++P T+ QL + DE I +++ + +VG
Sbjct: 25 GGFGSPTASQAEKKSRARSQN-----IVPCTISQLLSATLVDEV-FKIGNVEISQVIIVG 78
Query: 75 IVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
I+ + ++ IDD T ++ +W E + YV+V GHL++FQ+K
Sbjct: 79 IIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTGGENTVVPPETYVKVAGHLRSFQNK 138
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN----HLKEYNAI 189
+SL A+ + P+ D NE T+H +E + + ++ S QP ++ + E
Sbjct: 139 KSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSK----PSTQPSAGRASLSNPGMGEMGNF 194
Query: 190 SSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL 245
N ++ G ++ Q VL+ ++ RPE L +++ +Q ++P+ + + ++ L
Sbjct: 195 GGNSFTPTNGLNVTQNQVLNLIKACPRPEGLN-----FQDLRNQLQHMPLATIKQVVDFL 249
Query: 246 NENSLVYS-IDEFHYKSA 262
+ +YS +D+ H+KS
Sbjct: 250 SNEGHIYSTVDDDHFKST 267
>gi|156835859|ref|XP_001642188.1| hypothetical protein Kpol_167p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156112634|gb|EDO14330.1| hypothetical protein Kpol_167p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 274
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 32/261 (12%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID-GADVNTITV 72
GGGF S + S S + TL P+TVKQ+ E + I ++++I+
Sbjct: 13 GGGFENSDSRGGSAEGSGNS--LRISTLTPVTVKQILESKQLIQDGPFISYNQELHSISF 70
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEF----------NEVNQISK----G 118
VG+V ++ D I+DGTG+IE +W+ + + + +QI+K G
Sbjct: 71 VGVVRNITDHTSNIFLTIEDGTGQIEVRKWSEDASDIATSQENADSGSSDSQIAKQYKIG 130
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQ-LYNTRLRGGSSNQPQM 177
YV+VYG LK F K+++ ++ + FNEI +H +E I + N +L+ S Q
Sbjct: 131 TYVKVYGALKEFGGKKNVQYAVIKNVTSFNEIIAHHLEVIKCHAIANGKLQDASRVDEQA 190
Query: 178 TNSNH----LKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRNVISQQL 231
+N+N +KE SS + +D+ +L F + AN V +ISQ L
Sbjct: 191 SNNNDQSLFVKESETGSSTN-------PLDR-ILAFCKEQCSGKDANTFAVPIPLISQSL 242
Query: 232 NLPMDKLMEALESLNENSLVY 252
N+ + + E +L E +Y
Sbjct: 243 NIDENTVRECCNTLTEQGFIY 263
>gi|255725020|ref|XP_002547439.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135330|gb|EER34884.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 266
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 8 GAAAFAGGGFMP-SQATTVPD--PSSSFSKNRNVR-TLLPMTVKQLSELSSN-DESSASI 62
G A++GGGF SQ D SS K+ VR +L P+T+KQ+++ S + ++ +
Sbjct: 5 GFDAYSGGGFGNISQGGFSADHQGSSQSQKSNQVRQSLTPVTIKQINDASQHVPDAEFKV 64
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK----- 117
+ ++N I+ VG+V + + + I+DGTG IE W EQ+ E + K
Sbjct: 65 NNVELNMISFVGVVRKVDNNNATIVITIEDGTGSIEVRVWISEQITTAE-QETQKYEALL 123
Query: 118 GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQM 177
YV V G LK F +++S+ S+ PI D N+I H + I L ++ SS+ +
Sbjct: 124 NRYVFVGGSLKQFNNRKSVQNSSIFPITDSNQILYHHLSAIENHLKAQGIQKPSSSGGSL 183
Query: 178 ---TNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLP 234
NSN N +G S+ VL L+ GV + ISQ+LN+
Sbjct: 184 FVDGNSNTNSGVAGAQGN-----QGGSLTDRVLAVLKENSTTM-QEGVPVDYISQKLNIS 237
Query: 235 MDKLMEALESLNENSLVYS 253
++ +E + L E Y+
Sbjct: 238 REEALEHVNKLVEGGKAYA 256
>gi|291415888|ref|XP_002724181.1| PREDICTED: replication protein A2, 32kDa [Oryctolagus cuniculus]
Length = 268
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 122/246 (49%), Gaps = 17/246 (6%)
Query: 25 VPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKE 83
+P PS + + R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 27 LPTPSQALQEGRARAQHIVPCTISQLLSATLADEV-FKIGNVEISQVTIVGIIRHAEKAP 85
Query: 84 PQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ +
Sbjct: 86 TNIVYKIDDMTAAPMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIM 145
Query: 143 PIIDFNEITSHFVECIYVQ-LYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
P+ D NE T+H +E + + N S+ + +N + E S N + G +
Sbjct: 146 PLEDMNEFTAHILEVVNAHMMLNKSHSQPSAGRASFSNPG-MSEAGNFSGNSFLPANGLT 204
Query: 202 IDQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-ID 255
Q VL+ ++ RPE G++ + + QL ++ + + +A++ L+ +YS +D
Sbjct: 205 PAQNQVLNLIKACPRPE------GLNFHDLKNQLHHMTVASIKQAVDFLSNEGHIYSTVD 258
Query: 256 EFHYKS 261
+ H+KS
Sbjct: 259 DDHFKS 264
>gi|452978781|gb|EME78544.1| hypothetical protein MYCFIDRAFT_190791 [Pseudocercospora fijiensis
CIRAD86]
Length = 254
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 14/242 (5%)
Query: 29 SSSFSKNRNVRTLLPMTVKQL--SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
S+S ++ TL P+T+KQL + D ID ++ +T V V ++ +
Sbjct: 9 SASNKRSYGKDTLRPVTIKQLIDAHHPHPDAEHFMIDDSETTQVTFVAQVRNISTQTTNV 68
Query: 87 IFLIDDGTGRIECSRWAHEQ---MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ +DDGTG IE W + M+ + + +G Y RV+G LK F +KR + A +RP
Sbjct: 69 TYKLDDGTGTIEVKVWVDAETAAMDDGKPKVVEQG-YARVWGRLKEFNNKRHVGALFIRP 127
Query: 144 IIDFNEITSHFVECIYVQLYNTR-----LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDE 198
I D NEI+ H +E + L+ + L+ Q +
Sbjct: 128 ITDMNEISYHLLEATVIHLHYAKGPVEHLQANGGAQQSNGMGYGQQNGGGGGDAGGGMAG 187
Query: 199 GKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEF 257
+ V L+ N G+H VI+QQ+ L + +M+A + L VY ++D+
Sbjct: 188 LSPTARKVYGCLKNATH--TNEGLHAQVIAQQVGLEISAVMKAGDELMSLGKVYTTVDDL 245
Query: 258 HY 259
+
Sbjct: 246 TW 247
>gi|444314851|ref|XP_004178083.1| hypothetical protein TBLA_0A07750 [Tetrapisispora blattae CBS 6284]
gi|387511122|emb|CCH58564.1| hypothetical protein TBLA_0A07750 [Tetrapisispora blattae CBS 6284]
Length = 272
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 31/267 (11%)
Query: 13 AGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTIT 71
GGGF S D S + ++N +L P+T+KQ++E + I ++N I+
Sbjct: 14 TGGGFDSSDKIHSSDGSEAINRNN---SLTPVTIKQITESKQLVQDGPFVIHNQELNHIS 70
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNE-------------VNQISKG 118
VG+V ++ D I+DGTG+I+ +W+ + + + Q G
Sbjct: 71 FVGVVRNITDHTSNIFLTIEDGTGQIDVRKWSDDSNDISTSQDDSEKAGNSQIAQQYKVG 130
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMT 178
YV+V+G LK F K+++ +R + FNE+ +H +E I + G P
Sbjct: 131 SYVKVHGALKEFGGKKNVQYAVIRTVDSFNEVITHHLEVIKCHA----IAMGKMQNPSGE 186
Query: 179 NSNHLKEYNA---ISSNHYSFDEGKSIDQMVLDFLRRP--EFLANNNGVHRNVISQQLNL 233
+E +S N S D Q VL F R+ AN V +I+Q LN+
Sbjct: 187 AVKDTQEEGKSLFVSENSNSGDTA----QEVLAFCRKKCEGQDANQFAVPTALIAQSLNI 242
Query: 234 PMDKLMEALESLNENSLVY-SIDEFHY 259
D+ L E +Y + D+ HY
Sbjct: 243 SEDQARRCCTQLIEQGYIYPTFDDDHY 269
>gi|336470867|gb|EGO59028.1| hypothetical protein NEUTE1DRAFT_78687 [Neurospora tetrasperma FGSC
2508]
gi|350291935|gb|EGZ73130.1| replication protein A, subunit RPA32 [Neurospora tetrasperma FGSC
2509]
Length = 283
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 40 TLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQL + + +IDG V +T+VG V ++ + + IDDGTG I+
Sbjct: 35 SLRPVTIKQLLDWEETFPGAELAIDGHPVTQVTIVGQVRSVKPQPTNITYRIDDGTGAID 94
Query: 99 CSRWAHEQMEFNEVNQ-----ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
+W + + E I+ +VRV+G LK+ K+ ++A +R I DFNE+ H
Sbjct: 95 VKKWVDSEAQGGEDGGSGAGAIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNEVNYH 154
Query: 154 FVECIYVQLYNTRLRGGS 171
+E YV L+ T+ GS
Sbjct: 155 LLEATYVHLFFTKGAPGS 172
>gi|147899310|ref|NP_001085393.1| replication protein A2, 32kDa [Xenopus laevis]
gi|48734630|gb|AAH72101.1| MGC79017 protein [Xenopus laevis]
Length = 276
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 12/243 (4%)
Query: 26 PDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P P+ K+R+ + ++P TV QL + NDE I A+++ +T+VGIV +
Sbjct: 33 PAPTQGEKKSRSRSQQIVPCTVSQLLSATQNDEV-FRIGEAELSQVTIVGIVRHAEKAPT 91
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ +DD T ++ +W E + G YV+V GHL++FQ+K+S+ A+ + P
Sbjct: 92 NILYKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRSFQNKKSVVAFKIAP 151
Query: 144 IIDFNEITSHFVECIYVQLY---NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGK 200
+ D NE SH +E ++ + GG S T A S + + G
Sbjct: 152 VEDMNEFVSHMLEVVHAHMAMNSQGAPSGGGSTVALSTPGRVGDSGRAFSGGNDNPTNGL 211
Query: 201 SIDQ-MVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS-IDEF 257
+ Q +L ++ N G+ + +L+ + ++ + +A+E L+ +YS ID+
Sbjct: 212 TPHQSQILSLIKS---CKGNEGMAFEELKNRLHGMNVNTIRQAVEFLSNEGHIYSTIDDE 268
Query: 258 HYK 260
HYK
Sbjct: 269 HYK 271
>gi|85105463|ref|XP_961967.1| hypothetical protein NCU07717 [Neurospora crassa OR74A]
gi|28923556|gb|EAA32731.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 284
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 40 TLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQL + + +IDG V +T+VG V ++ + + IDDGTG I+
Sbjct: 35 SLRPVTIKQLLDWEETFPGAELAIDGHPVTQVTIVGQVRSVKPQPTNITYRIDDGTGAID 94
Query: 99 CSRWAHEQMEFNEVNQ-----ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
+W + + E I+ +VRV+G LK+ K+ ++A +R I DFNE+ H
Sbjct: 95 VKKWVDSEAQGGEDGGSGAGTIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNEVNYH 154
Query: 154 FVECIYVQLYNTRLRGGS 171
+E YV L+ T+ GS
Sbjct: 155 LLEATYVHLFFTKGAPGS 172
>gi|260821938|ref|XP_002606360.1| hypothetical protein BRAFLDRAFT_118513 [Branchiostoma floridae]
gi|229291701|gb|EEN62370.1| hypothetical protein BRAFLDRAFT_118513 [Branchiostoma floridae]
Length = 1267
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF S A + D SS R + LLP T+ L + + E S + D+N +TVVG
Sbjct: 30 GGFD-SPAASSQDRKSS----RRAQNLLPCTISHLLQ-AQQMEDSFRLGDTDINQVTVVG 83
Query: 75 IVCDMQDKEPQFIFLIDDGTGR-IECSRW--------AHEQMEFNEVNQISKGMYVRVYG 125
+V + Q ++ IDD TG ++ +W EQ + VN Y+R G
Sbjct: 84 VVRNAQRAPTNILYKIDDMTGPPMDVRQWLDNDDTIAEEEQDQLFPVNS-----YIRATG 138
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
HL+AFQ K+SL A+ + P+ DFNE+T H +E + +
Sbjct: 139 HLRAFQGKKSLVAFKIAPVTDFNELTMHILEVVQAHM 175
>gi|171690528|ref|XP_001910189.1| hypothetical protein [Podospora anserina S mat+]
gi|170945212|emb|CAP71323.1| unnamed protein product [Podospora anserina S mat+]
Length = 284
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 41 LLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG-RIE 98
L P+T+KQ+ + + +ES +IDG V+T+T+VG V +Q + + IDDGTG I+
Sbjct: 44 LRPVTIKQIHDAKAGYNESEITIDGFPVSTVTLVGQVRSVQPQTTNITYKIDDGTGGTID 103
Query: 99 CSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W E+ E S +VRV G L +F K + A+ +R I D+NE++ H +E
Sbjct: 104 VKKWVDLEKSESGAETPFSLDTWVRVLGRLSSFNGKIHVGAHHVRVIDDYNEVSYHLLES 163
Query: 158 IYVQLYNTR-LRGGSSNQPQ 176
YV + +R L GG Q +
Sbjct: 164 TYVHVCISRGLPGGPWPQKE 183
>gi|392591816|gb|EIW81143.1| replication protein A subunit RPA32 [Coniophora puteana RWD-64-598
SS2]
Length = 303
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 40 TLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+ QL + ++ ++ ++ ++ +T V V +Q++ ++ +DDGTGRIE
Sbjct: 49 SLRPLTISQLLNATQAHSDAEWMLEDMEIGHVTCVAHVVSVQNQATNHVYELDDGTGRIE 108
Query: 99 CSRWAHEQME--------FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEI 150
+E +VN + KG YVRV G+LK F R +N +RP +EI
Sbjct: 109 ARHQTDSSLEEDADKEAGIKQVNIVYKGTYVRVLGNLKMFGSTRYINVNHIRPAKSADEI 168
Query: 151 TSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFL 210
H E + + R S + Q ++ I S E ++Q +L F+
Sbjct: 169 DLHPREAVTPTMMRERGPVKSHSVAQSDDATQSHGGALIDSQWAHLSE---LNQNILQFI 225
Query: 211 R-RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYK 260
+ +P A GV I L L +ALE L + L+YS +DE H++
Sbjct: 226 KDQP---ATEEGVDSAAILGALETTALALDQALEQLMNDGLIYSTVDESHFQ 274
>gi|145353240|ref|XP_001420928.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581164|gb|ABO99221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 249
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 19/233 (8%)
Query: 40 TLLPMTVKQLS---ELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
T+ P+TVK L + + + ++G V+ +TVVG + ++ K ++ +DD TG
Sbjct: 24 TMKPLTVKMLKRAIDARQTPDETLVVNGVPVHNLTVVGKIVGVESKSSYVLYKVDDSTGV 83
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYS---LRPIIDFNEITSH 153
+ W+ + + I G YVRVYG +K ++ + A++ +R I D NE+T H
Sbjct: 84 CDVKVWSDQDGD-QTAEPIEVGAYVRVYGSVKTLANEHMIAAHTQQAVRKITDHNEVTFH 142
Query: 154 FVECIYVQLY--NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR 211
+E +Y + T++ GG++ P + + N ++ +E ID ++ L+
Sbjct: 143 MLEVVYASGHAEKTKVSGGAA--PANAYTVPQQAPNVAANGDLGSEE---IDVSIMGVLK 197
Query: 212 RPEFLANNNGVHRNVISQQLN--LPMDKLMEALESLNENSLVY-SIDEFHYKS 261
+F G+ + I+ + N D + ALE ++ V+ +IDE HY +
Sbjct: 198 --QFAEGEQGMTVDEIASKQNGKFTRDAIKAALEEMSNGGEVFTTIDEDHYAA 248
>gi|45187697|ref|NP_983920.1| ADL176Wp [Ashbya gossypii ATCC 10895]
gi|44982458|gb|AAS51744.1| ADL176Wp [Ashbya gossypii ATCC 10895]
Length = 275
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 2 YSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSA 60
Y F+ + GGGF SQA+ P S+ ++ TL P+T+KQ+ E +
Sbjct: 4 YQQPFNEFSTVTGGGF-DSQAS-AGRPGST--GGQSTATLTPVTIKQILEAKQQVQDGPY 59
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN------- 113
+ +++ I VG+V ++ D ++DGTG+IE +W+++Q + +
Sbjct: 60 VVHSMELHNICFVGVVRNVVDNTANVNVTVEDGTGQIEFRQWSNDQKDMERASQGETAEY 119
Query: 114 ------QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV-QLYNTR 166
Q G YV+V+ L+ F K ++ ++P+ +FNE+ +H + I L N R
Sbjct: 120 NSELSQQFQIGNYVKVFATLREFGGKMNIQYALVKPVENFNEVLAHHLAAIKCYALANGR 179
Query: 167 LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHR 224
L ++ + + + N YS K Q +LDF R + AN VH
Sbjct: 180 LAPPAAPFNAAAGAQGGQSL-FVQDNDYS--SAKPATQRILDFCRDQCKDKDANTFSVHT 236
Query: 225 NVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
I+Q L++ D + ++L E +Y + DE Y
Sbjct: 237 KFIAQSLSMLEDDVRMHCQTLTEQGFIYPTFDENSY 272
>gi|406694815|gb|EKC98135.1| hypothetical protein A1Q2_07546 [Trichosporon asahii var. asahii
CBS 8904]
Length = 236
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 8/227 (3%)
Query: 36 RNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGT 94
R +TL P+T+KQ+ E + ++ IDG DV+ I +G V +M ++ I DGT
Sbjct: 11 RANQTLRPVTIKQIREAKQPHPDADWQIDGVDVSHIHYIGSVHNMATTATNVMYEIGDGT 70
Query: 95 GRIECSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
G IE +W E E + I++ YV V G LK F DK ++A +RP+ + +E+ +H
Sbjct: 71 GYIETRQWLDSEADEQGKTAGIAQDKYVSVIGTLKKFNDKLHVSAQQIRPVDNSDEVYNH 130
Query: 154 FVECIYVQL--YNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR 211
++ + V L N G + + ++N A N + + +++ +++ +
Sbjct: 131 LLKALAVSLSYRNPTANGAPAGAGGVASANDYAAPGAAGGNASEYADLPPLERKIMEII- 189
Query: 212 RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEF 257
+ +++GVH + +S+Q +++M A+E+L E L +ID+
Sbjct: 190 --AAVDDDDGVHVSTVSRQCGGSGEEVMSAIENLMAEGRLFSTIDDL 234
>gi|114051646|ref|NP_001039449.1| replication protein A 32 kDa subunit [Bos taurus]
gi|86438509|gb|AAI12730.1| Replication protein A2, 32kDa [Bos taurus]
gi|296489970|tpg|DAA32083.1| TPA: replication protein A2, 32kDa [Bos taurus]
Length = 270
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 31/270 (11%)
Query: 6 FDGAAAF--AGGGFMPSQATTVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASI 62
F GA + + GGF P S + K+R + ++P T+ QL + DE I
Sbjct: 14 FGGAGGYTQSPGGF------GSPTASQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRI 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
+++ +T+VGI+ + + ++ IDD T ++ +W +E + YV
Sbjct: 67 GNVEISQVTIVGIIRNAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYV 126
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY----NTRLRGGSS--NQP 175
+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + + N++ G + + P
Sbjct: 127 KVAGHLRSFQNKKSLVAFKIIPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGRAPISNP 186
Query: 176 QMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFL----ANNNGVHRNVISQQL 231
M + + N I +N + + + ++ ++ RPE L N H +V S +
Sbjct: 187 GMGEAGNFGGNNFIPANGLTVAQNQVLN--LIKACPRPEGLNFQDLKNQLQHMSVAS--I 242
Query: 232 NLPMDKLMEALESLNENSLVYSIDEFHYKS 261
L +D L NE + ++D+ H+KS
Sbjct: 243 KLAVDFLS------NEGHIYSTVDDDHFKS 266
>gi|367045570|ref|XP_003653165.1| hypothetical protein THITE_2047529, partial [Thielavia terrestris
NRRL 8126]
gi|347000427|gb|AEO66829.1| hypothetical protein THITE_2047529, partial [Thielavia terrestris
NRRL 8126]
Length = 239
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQL E + + ++DG +T+VG V + + + IDDGTG I+
Sbjct: 3 SLRPVTIKQLIECKEAYPGADLAVDGVPTTQVTLVGQVRSVNPQAVNVTYRIDDGTGVID 62
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W N + + YVRV+G L +F ++ + A+ +R I DFNE+ H +E
Sbjct: 63 VKKWIDADKADN-TPRFAPDTYVRVFGRLSSFNGRKHVGAHYIRAIDDFNEVNYHLLEAT 121
Query: 159 YVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMV-------LDFLR 211
YV L T +GG ++ Q ++ + D G + L
Sbjct: 122 YVHLCLT--KGGLADLQQQQQQQQQQQVGDDGGDSMFVDGGYGAGGGISSDGPPRLSVCS 179
Query: 212 RPE-----FLANNNG--VHRNVISQQLNLPMDKLMEALESLNENSLVYSIDE 256
R +L N G H N IS LP+ ++ A L +N L+Y+ D+
Sbjct: 180 RNARTMYNYLVNTPGDSQHINQISAGTGLPVRDVLAASAELLDNGLIYTTDD 231
>gi|387018042|gb|AFJ51139.1| Replication protein A 32 kDa subunit [Crotalus adamanteus]
Length = 266
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 28/260 (10%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF AT S S S+N ++P TV QL D+ + +++ + +VG
Sbjct: 20 GGFTSPSATQGERKSRSRSQN-----IVPCTVSQLFSAEQVDDV-FRVREVELSQVIIVG 73
Query: 75 IVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
I+ + ++ +DD T ++ +W E +E + G YV+V GHL++FQ+K
Sbjct: 74 IIRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEEGSENVVVPPGTYVKVAGHLRSFQNK 133
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNH 193
+SL A+ + P+ D NE T+H +E + + LR SN PQ +S + + ++
Sbjct: 134 KSLVAFKIMPLEDMNEFTTHLLEVVNAHMV---LR--KSNTPQ--SSKIPQSFGVFETSS 186
Query: 194 YSFDEGKSIDQM---------VLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALE 243
S G M VL+ ++ G+ + + QL N+ + L +A+E
Sbjct: 187 MSNAGGNDSLTMHGLTPHQSQVLNLIKS---CMTTEGISLHDLKSQLHNINLQTLKKAVE 243
Query: 244 SLNENSLVYS-IDEFHYKSA 262
L+ +YS ID+ H+KS
Sbjct: 244 FLSSEGHIYSTIDDEHFKST 263
>gi|301755100|ref|XP_002913372.1| PREDICTED: replication protein A 32 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 270
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 125/245 (51%), Gaps = 17/245 (6%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +TVVGI+ +
Sbjct: 30 PTPSQAEKKSRARAQHIVPCTISQLLSATLVDEM-FKIGNVEISQVTVVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ +DD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 89 NIVYKLDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 148
Query: 144 IIDFNEITSHFVECIYVQLY----NTRLRGGSS--NQPQMTNSNHLKEYNAISSNHYSFD 197
+ D NE T+H +E + + N++ G + + P M + + +++ +N +
Sbjct: 149 LEDMNEFTTHILEVVNAHMTLSKSNSQPPAGRAPISNPGMGETANFGGNSSMPANGLTVA 208
Query: 198 EGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDE 256
+ + ++ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+
Sbjct: 209 QNQVLN--LIKACPRPEGLN-----FQDLKNQLQHMTVASIKQAVDFLSNEGHIYSTVDD 261
Query: 257 FHYKS 261
H+KS
Sbjct: 262 DHFKS 266
>gi|410927418|ref|XP_003977145.1| PREDICTED: replication protein A 32 kDa subunit-like [Takifugu
rubripes]
Length = 274
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 16/243 (6%)
Query: 34 KNRNVRT-LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDD 92
K R+ T ++P TV QL S DE+ + +V IT+VG++ + +DD
Sbjct: 34 KGRSRATQIIPCTVSQLMSASQADEA-FKVGDVEVVQITLVGVIRSTDKSMTNIQYKVDD 92
Query: 93 GTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEIT 151
T ++ +W + + + YV+V G+L++FQ+ RS+ A+S+RP+ D NEIT
Sbjct: 93 MTAAPMDVKQWVDTEDPNVDSTVLPPDTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEIT 152
Query: 152 SHFVECIYVQLY----NTRLRGGS---SNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ 204
SH +E + + + GG SN QM +N + + + G S +Q
Sbjct: 153 SHMLEVVQAHMILGTPKSMGSGGGRVNSNSTQMPRTNTETLGGSYTGVDMMANNGLSANQ 212
Query: 205 -MVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESL-NENSLVYSIDEFHYKS 261
VL +R + G+ + Q+L+ + + + + +E L NE + +IDE HYKS
Sbjct: 213 NQVLSLIRSCPY---PQGISIQELKQRLSGIGLSVIKQVVEFLSNEGHIFSTIDEDHYKS 269
Query: 262 AVN 264
N
Sbjct: 270 TDN 272
>gi|374107133|gb|AEY96041.1| FADL176Wp [Ashbya gossypii FDAG1]
Length = 275
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 2 YSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSA 60
Y F+ + GGGF SQA+ P S+ ++ TL P+T+KQ+ E +
Sbjct: 4 YQQPFNEFSTVTGGGF-DSQAS-AGRPGST--GGQSTATLTPVTIKQILEAKQQVQDGPY 59
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN------- 113
+ +++ I VG+V ++ D ++DGTG+IE +W+++Q + +
Sbjct: 60 VVHSMELHNICFVGVVRNVVDNTANVNVTVEDGTGQIEFRQWSNDQKDMERASQGETAEY 119
Query: 114 ------QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV-QLYNTR 166
Q G YV+V+ L+ F K ++ ++P+ +FNE+ +H + I L N R
Sbjct: 120 NSELSQQFQIGNYVKVFATLREFGGKMNIQYALVKPVENFNEVLAHHLAAIKCYALANGR 179
Query: 167 LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHR 224
L ++ + + + N Y + K Q +LDF R + AN VH
Sbjct: 180 LAPPAAPFNAAAGAQGGQSL-FVQDNDY--NSAKPATQRILDFCRDQCKDKDANTFSVHT 236
Query: 225 NVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
I+Q L++ D + ++L E +Y + DE Y
Sbjct: 237 KFIAQSLSMLEDDVRMHCQTLTEQGFIYPTFDENSY 272
>gi|302506485|ref|XP_003015199.1| possible replication factor-a protein [Arthroderma benhamiae CBS
112371]
gi|291178771|gb|EFE34559.1| possible replication factor-a protein [Arthroderma benhamiae CBS
112371]
Length = 274
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 39 RTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
R++ P+T+KQL++ + E+ ID AD+N ++ VG V ++ + +DDGTG
Sbjct: 18 RSVRPVTIKQLNDATQAFPEAPFKIDNADINQVSFVGQVRNVNKLATHITYKLDDGTGET 77
Query: 98 ECSRW--AHEQMEFNEV-----------------------------NQISKGMYVRVYGH 126
+ + E+ F+E+ +QI+ Y +V+ +
Sbjct: 78 DVKYFIPPEEKEAFDELEAMDVMAMDGGGSNAGPAAVTNKSGRPRAHQITTNGYAKVFAN 137
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+K F D+R +NA +RPI + NE HF+E V LY T+ + +
Sbjct: 138 VKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLYFTKGPPPKAGGASGVGAGTGGGA 197
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ ++ S + + + D L + N G+H NV++ + + ++++ +A E L
Sbjct: 198 MDMGGSNLSLPRMSPMARKLYDALSNSK--QTNEGMHVNVLAPIMQVNVNEVYKAAEELL 255
Query: 247 ENSLVY-SIDEFHYK 260
S++Y ++DE +K
Sbjct: 256 GLSVIYHTVDEDTWK 270
>gi|196015539|ref|XP_002117626.1| hypothetical protein TRIADDRAFT_32825 [Trichoplax adhaerens]
gi|190579795|gb|EDV19884.1| hypothetical protein TRIADDRAFT_32825 [Trichoplax adhaerens]
Length = 140
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
L+P+TV QL + + + + I G +V IT VG++ + + + +DD T I
Sbjct: 1 LIPVTVAQLLKATEDQGDTYQISGREVYQITFVGVIRSVTESAAYTQYAVDDMTKSPISV 60
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
RW ++ N + ++ YVRV GHL+A Q R + A +++PI D NEIT H +E I+
Sbjct: 61 RRWVDSEVSCNMYSTLADDTYVRVVGHLRALQGVRYVMAINIQPIEDCNEITYHILEVIH 120
Query: 160 VQLYNTR 166
L T+
Sbjct: 121 SHLLQTK 127
>gi|401885261|gb|EJT49383.1| hypothetical protein A1Q1_01478 [Trichosporon asahii var. asahii
CBS 2479]
Length = 236
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 8/227 (3%)
Query: 36 RNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGT 94
R +TL P+T+KQ+ E + ++ IDG DV+ I +G V +M ++ I DGT
Sbjct: 11 RANQTLRPVTIKQIREAKQPHPDADWQIDGVDVSHIHYIGSVHNMATTATNVMYEIGDGT 70
Query: 95 GRIECSRWAH-EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
G IE +W E E + I++ YV + G LK F DK ++A +RP+ + +E+ +H
Sbjct: 71 GYIETRQWLDSEADEQGKTAGIAQDKYVSMIGTLKKFNDKLHVSAQQIRPVDNSDEVYNH 130
Query: 154 FVECIYVQL--YNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR 211
++ + V L N G + + ++N A N + + +++ +++ +
Sbjct: 131 LLKALAVSLSYRNPTANGAPAGAGGVASANDYAAPGAAGGNASEYADLPPLERKIMEII- 189
Query: 212 RPEFLANNNGVHRNVISQQLNLPMDKLMEALESL-NENSLVYSIDEF 257
+ +++GVH + +S+Q +++M A+E+L E L +ID+
Sbjct: 190 --AAVDDDDGVHVSTVSRQCGGSGEEVMSAIENLMAEGRLFSTIDDL 234
>gi|395521870|ref|XP_003765037.1| PREDICTED: replication protein A 32 kDa subunit [Sarcophilus
harrisii]
Length = 275
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 1 MYSGEFDGA---AAFAGGGFMPSQATT---VPDPSSSFSKNR-NVRTLLPMTVKQLSELS 53
M++ FDG+ ++ GGG+ SQA P S + K+R + ++P T+ QL +
Sbjct: 1 MWNSGFDGSYGNTSYGGGGY--SQAPGGFGTPTASQAEKKSRARAQHIVPCTISQLLSAN 58
Query: 54 SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEV 112
DE I +++ +T+VGI+ + ++ IDD T ++ +W +E
Sbjct: 59 LIDEV-FKIGEIEISQVTIVGIIRQAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSEN 117
Query: 113 NQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC-----IYVQLYNTRL 167
+ YV+V GHL++FQ+K+SL A+ + P+ D NE T H +E I Q + L
Sbjct: 118 TVVPPETYVKVAGHLRSFQNKKSLVAFKILPLEDMNEFTIHILETVNAHMILSQSISQPL 177
Query: 168 RGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFLANNNGVH 223
G S N+ N G ++ Q VL+ ++ RPE +
Sbjct: 178 AGRPSLHTSGIGDAGNFGGNSFGGNSLMPANGLTVTQNQVLNLIKACPRPEGMN-----F 232
Query: 224 RNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
+++ SQ NL + + +A++ L+ +YS +D+ H+KS
Sbjct: 233 QDLKSQLHNLNVSVIKQAVDFLSNEGHIYSTVDDDHFKS 271
>gi|296472882|tpg|DAA14997.1| TPA: replication protein A2, 32kDa-like [Bos taurus]
Length = 270
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 6 FDGAAAF--AGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID 63
F GA + + GGF S A+ S + +++ ++P T+ QL + DE I
Sbjct: 14 FGGAGGYTQSPGGFGSSTASQAKKKSRARAQH-----IVPCTISQLLSATLVDEI-FRIG 67
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTG-RIECSRWAHEQMEFNEVNQISKGMYVR 122
+++ +T+VGI+ + + ++ IDD T ++ +W +E + YV+
Sbjct: 68 NVEISRVTIVGIIRNAEKPATNIVYKIDDMTTVPMDVRQWVDTDDASSENTVVPPEAYVK 127
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY----NTRLRGGSS--NQPQ 176
V GHL++FQ+K+SL A+ + P+ NE T+H +E + + N++ G + ++P
Sbjct: 128 VAGHLRSFQNKKSLVAFKIMPLEHMNEFTTHILEVVNAHMMLSKSNSQPSAGRAPISKPG 187
Query: 177 MTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFL----ANNNGVHRNVISQQLN 232
M + + N I +N + + + ++ ++ RPE L N H +V S +
Sbjct: 188 MGEAGNFGGNNFIPANGLTVAQNQVLN--LIKACPRPEGLNFQDLKNQLQHMSVAS--IK 243
Query: 233 LPMDKLMEALESLNENSLVYSIDEFHYKS 261
L +D L NE + ++D+ H+KS
Sbjct: 244 LAVDFLS------NEGHIYSTVDDDHFKS 266
>gi|336263699|ref|XP_003346629.1| RFA2 protein [Sordaria macrospora k-hell]
gi|380090523|emb|CCC11820.1| putative RFA2 protein [Sordaria macrospora k-hell]
Length = 284
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 40 TLLPMTVKQLSELSSNDES-SASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQL + +IDG + +T+VG V ++ + + IDDGTG I+
Sbjct: 35 SLRPVTIKQLLDWEDTYPGMDPTIDGHPITQVTIVGQVRSVKPQPTNITYKIDDGTGAID 94
Query: 99 CSRWAHEQMEFNEVN-----QISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
+W + + N I+ +VRV+G LK+ K+ ++A +R I DFNE+ H
Sbjct: 95 VKKWVDSEAQGEGENGSGAGAIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNEVNYH 154
Query: 154 FVECIYVQLY 163
+E YV L+
Sbjct: 155 LLEATYVHLF 164
>gi|389748920|gb|EIM90097.1| replication protein A subunit RPA32 [Stereum hirsutum FP-91666 SS1]
Length = 295
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 30/259 (11%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
P + + ++L PMT+KQ+ + ++ ++ + ++ ITVV V ++ +
Sbjct: 36 PGGAARRGALSQSLRPMTIKQIGASTQAHADADWIWENTEIGQITVVAQVLTIKAQTTNC 95
Query: 87 IFLIDDGTGRIECSRWAHE--QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
++ IDDGT +I+ W+ + E ++ + I + Y R+ G +K + DK+ +N ++RP
Sbjct: 96 VYTIDDGTDQIDARFWSDSTNENEGDDSSTIKELQYARITGTIKTYNDKKYINCINIRPA 155
Query: 145 IDFNEITSHFVECIYVQLYNTR--LRGGSSNQP--------------------QMTNSNH 182
D +EI H E + V L++ R +R +QP Q TNSN
Sbjct: 156 KDSHEIYFHLSEAMAVTLFHERGSVRFPPKSQPAVAHVCILQPSGAQAPSGAGQSTNSNS 215
Query: 183 LKEYNAISSNHYSFDEGKSIDQMVLDFLR-RPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ ++ + F+ +P + G+H + I++ + + A
Sbjct: 216 AYTAQTSIPADDQYAHLPPCEKAIAYFMHTQPR---HEEGIHVSNIARNVPFQAPDIGSA 272
Query: 242 LESLNENSLVYS-IDEFHY 259
LE+L ++ ++YS IDE HY
Sbjct: 273 LEALMDHGILYSTIDETHY 291
>gi|315045856|ref|XP_003172303.1| hypothetical protein MGYG_04892 [Arthroderma gypseum CBS 118893]
gi|311342689|gb|EFR01892.1| hypothetical protein MGYG_04892 [Arthroderma gypseum CBS 118893]
Length = 273
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 35/255 (13%)
Query: 39 RTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
R++ P+T+KQL++ + E++ ID AD+N ++ VG V ++ + +DDGTG
Sbjct: 17 RSVRPVTIKQLNDATQAFPEANFKIDNADINQVSFVGQVRNVNKLATHITYKLDDGTGET 76
Query: 98 ECSRW--AHEQMEFNEVN-----------------------------QISKGMYVRVYGH 126
+ + E+ F+E+ QI+ Y +V+ +
Sbjct: 77 DVKYFIPPEEKEAFDELEAMDVMAMDGAGSGAGPAAVTNKSGRPRAYQITTNGYAKVFAN 136
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+K F D+R +NA +RPI + NE HF+E V LY T+ +
Sbjct: 137 IKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLYFTKGPPPKAGGASGAGGGAGGGA 196
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+++ S + + + D L N G+H NV++ + + ++++ +A E L
Sbjct: 197 MDTGASNLSLPRMSPMARKLYDALSNSR--QTNEGMHVNVLAPIMQVNVNEVYKAAEELL 254
Query: 247 ENSLVY-SIDEFHYK 260
S++Y ++DE +K
Sbjct: 255 GLSVIYHTVDEDTWK 269
>gi|58267036|ref|XP_570674.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226907|gb|AAW43367.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 251
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 39 RTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+T+ P+TVKQ+ + + ++ +IDG DV + ++G V +M + I DGTG I
Sbjct: 40 QTIRPVTVKQILDAQQVHPDADFTIDGVDVAQVLLIGSVRNMSTTATNISYEIGDGTGYI 99
Query: 98 ECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
+ W E + I + YV + G +K F KR ++A +RPI D NE+ H ++
Sbjct: 100 DARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSATHIRPITDGNEVQHHLLK 159
Query: 157 CIYVQLYNTRLRGGS 171
+YV L LRGG+
Sbjct: 160 ALYVSLI---LRGGT 171
>gi|320581002|gb|EFW95224.1| Subunit of heterotrimeric Replication Protein A (RPA) [Ogataea
parapolymorpha DL-1]
Length = 253
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 17/231 (7%)
Query: 27 DPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQ 85
+ SSS +++ ++L+P+T+K++++ S S ++ G ++ + VGI+ ++ + Q
Sbjct: 24 ETSSSQTRSAVTQSLIPVTIKEINDASQSGPDAPFQTHGLELYYVAFVGIIRELDASQAQ 83
Query: 86 FIFL-IDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
L I+DGTG + +W E E NE + + G YV+V ++ F K+ + +++ I
Sbjct: 84 STMLKIEDGTGMVSVRKWNDE--EGNESDSFATGEYVKVVATIREFSGKKQIQTQTVQKI 141
Query: 145 IDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISS---NHYSFDEGKS 201
DFNEI HF+ I V L N+ GS+ H N SS + S D S
Sbjct: 142 QDFNEIPYHFLSAIKVYLDNS----GST-----IVGKHSTSANGDSSLFVGNGSGDGANS 192
Query: 202 IDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ + +F++ + +GV +I+Q N+ ++ + +L ++ +Y
Sbjct: 193 PLEKIFEFVQENSAVM-TDGVPLQLIAQNFNISIEDAESKIATLVDDGRIY 242
>gi|358054148|dbj|GAA99684.1| hypothetical protein E5Q_06386 [Mixia osmundae IAM 14324]
Length = 253
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 29 SSSFSKNRNVRTLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
S +K + P+T+ + S + E+ + DG ++ + V+ +V D+
Sbjct: 19 SPGGAKQKGDGHCTPVTLAMVTSAEQGHAEAPYTYDGVEIGNVEVIALVEDLNAASTNAT 78
Query: 88 FLIDDGTGRIECSRWAHEQMEFN-EVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+DDGTGR + W E + ++ I KG V V G LK F KRS+N +RP+ D
Sbjct: 79 LSLDDGTGRADARVWLENGAESSYQLEGIEKGTTVHVIGGLKDFNSKRSINIVHVRPVHD 138
Query: 147 FNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMV 206
NE H + ++QL R G + +N + I + +F + + +
Sbjct: 139 PNEEAYHRLRVAHLQLQRKRPTGARTG----PGANAYRAAGIIDGDEAAFASLTAKGKKI 194
Query: 207 LDFLR--RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYSIDEFHYKSAV 263
+ +L+ + GV +++Q + + + SL+++ ++ +DE + A+
Sbjct: 195 MLYLKELKDSGAIGGGGVAEEQLARQTGISLQDVKAEAISLSDDGQIFEMDEGFWAPAL 253
>gi|358054147|dbj|GAA99683.1| hypothetical protein E5Q_06387 [Mixia osmundae IAM 14324]
Length = 252
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 8/225 (3%)
Query: 43 PMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSR 101
P+T+ + S + E+ + DG ++ + V+ +V D+ +DDGTGR +
Sbjct: 32 PVTLAMVTSAEQGHAEAPYTYDGVEIGNVEVIALVEDLNAASTNATLSLDDGTGRADARV 91
Query: 102 WAHEQMEFN-EVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV 160
W E + ++ I KG V V G LK F KRS+N +RP+ D NE H + ++
Sbjct: 92 WLENGAESSYQLEGIEKGTTVHVIGGLKDFNSKRSINIVHVRPVHDPNEEAYHRLRVAHL 151
Query: 161 QLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR--RPEFLAN 218
QL R G + +N + I + +F + + ++ +L+ +
Sbjct: 152 QLQRKRPTGARTG----PGANAYRAAGIIDGDEAAFASLTAKGKKIMLYLKELKDSGAIG 207
Query: 219 NNGVHRNVISQQLNLPMDKLMEALESLNENSLVYSIDEFHYKSAV 263
GV +++Q + + + SL+++ ++ +DE + A+
Sbjct: 208 GGGVAEEQLARQTGISLQDVKAEAISLSDDGQIFEMDEGFWAPAL 252
>gi|443925920|gb|ELU44677.1| OB-fold nucleic acid binding domain-containing protein [Rhizoctonia
solani AG-1 IA]
Length = 305
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 20/238 (8%)
Query: 34 KNRNV-RTLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLID 91
K RNV ++L P+T++Q+ + ++ ++ ID ++ IT+V V + + ++
Sbjct: 73 KARNVNQSLRPVTIRQIYTAEQTHSDADYIIDNSETTQITLVAQVVAANKQATNITYKLN 132
Query: 92 DGTGRIECSRWAHEQMEFNEVNQISKG----MYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
DGT I+ W +E +E I G +Y+RV G LK F +R +NA R ++D
Sbjct: 133 DGTAEIKAKHW----LENSEEEPIGHGQNEHVYIRVVGTLKTFSGERQINAVHTRLVVDP 188
Query: 148 NEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYS-FDEGKSIDQMV 206
EI H +E V L+ TR R ++ + Y A S F + + +
Sbjct: 189 MEIYYHLIEAQLVHLHYTR-RANIASGAVSAGAPAASAYQAGGKGQQSKFANFPPLQRRI 247
Query: 207 LDFLRR--PEFLANNNGVHRNVISQQLNL--PMDKLMEALESLNENSLVY-SIDEFHY 259
L+ L + P+ + GVH I+ LN+ +D++ +E L E +Y ++D+ H+
Sbjct: 248 LEVLEQLMPQ---HEQGVHVTTIANGLNVQASIDEIGATMEKLAEEGHIYATMDDEHF 302
>gi|225558605|gb|EEH06889.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
capsulatus G186AR]
Length = 276
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCD 78
SQA + + KN +L P+T+KQ L ++ ++ IDG +V+ +T VG V
Sbjct: 23 SQAVKEVAKEAGYMKN----SLRPVTIKQTLDATQAHGDADFKIDGTEVSQVTFVGQVRA 78
Query: 79 MQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM-----------------YV 121
+ + +DDGTG IE W +E N VN M Y
Sbjct: 79 VSHLTTFVTYKLDDGTGEIEVKLW----LEKNAVNPTGDDMDTGDAPRSSESEIPINGYA 134
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR--LRGGSSNQPQMTN 179
+V+G L F ++R+ A+ +RPI + +E HF+E + LY TR + G ++ +
Sbjct: 135 KVWGKLNNFNNRRNFVAHVIRPITNIDEYNCHFLEATAIHLYYTRGPVGGHLGDEKPLPG 194
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPM 235
+ H +S F GK++ M + E L+N N G+H ++ + LP+
Sbjct: 195 ATH-------ASGGGPF-AGKTLPPMSPLARKMYETLSNTPQSNEGLHVQHLASLMGLPV 246
Query: 236 DKLMEALESLNENSLVYS 253
++ +A E L +L++S
Sbjct: 247 GEVYKAKEELLSLALIFS 264
>gi|397642887|gb|EJK75519.1| hypothetical protein THAOC_02754, partial [Thalassiosira oceanica]
Length = 265
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 34 KNRNVRTLLPMTVKQLSELSSNDESSASI---DGADVNTITVVGIVCDMQDKEPQFIFLI 90
+N + +TL+P+T + +++ + + DG ++ I +VG V + + +
Sbjct: 19 RNYDDQTLIPVTCRMIAQALGDPSDQGDLTLKDGRSLHMIKIVGAVREADLRSTNLFVQL 78
Query: 91 DDGTGRIECSRWAHEQMEFNEVNQISKGM-----YVRVYGHLKAFQDKRSLNAYSLRPII 145
+DGTG ++ W ++ + + ++Q+ + Y+RV G ++ F R + A +RP+
Sbjct: 79 EDGTGLMQVKVWINDGDDPSAISQLRQEACREHSYIRVIGQVREFDGSRQIVANDMRPVT 138
Query: 146 DFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLK----EYNAISSNHYSFDEGK- 200
D NE+T HF+E +++ G ++ N + I + D GK
Sbjct: 139 DSNEVTYHFLEVAQSYEKMKKMQSGQASGMGFGIGNMASGGPPQGGGIKAAGQGLDGGKG 198
Query: 201 ---SIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESL----NENSLVYS 253
S++ V++ +R L +G H N I Q++L M+ +++ NE + +
Sbjct: 199 AGNSLNDEVVNVIR---GLGGESGAHVNEIVSQVSLKGFSEMDIRDAVTYLSNEGHIYST 255
Query: 254 IDEFHYKSA 262
IDE HY+ A
Sbjct: 256 IDEDHYQYA 264
>gi|296806551|ref|XP_002844085.1| single-stranded DNA binding protein p30 subunit [Arthroderma otae
CBS 113480]
gi|238845387|gb|EEQ35049.1| single-stranded DNA binding protein p30 subunit [Arthroderma otae
CBS 113480]
Length = 276
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 36/255 (14%)
Query: 39 RTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
R++ P+T+KQL++ + +++ ID AD+N ++ VG V ++ + +DDGTG
Sbjct: 21 RSIRPVTIKQLNDATQPFPDTNFKIDNADINQVSFVGQVRNVNKLATHITYKLDDGTGET 80
Query: 98 ECSRW--AHEQMEFNEV-----------------------------NQISKGMYVRVYGH 126
+ + E+ F+E+ +QI+ Y +V+ +
Sbjct: 81 DVKYFIPPEEKEAFDELEAMDVMAMDGPGSGAGAAGVTNKSGRPRASQITTNGYAKVFAN 140
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+K F D+R +NA +RP+ NE HF+E V LY T+ +
Sbjct: 141 VKTFNDRRQVNAVLIRPVTSMNEYHVHFLEATAVHLYFTKGPPPKAGGSGAGAGIGGGPK 200
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ +S ++ S + + D L + N G+H NV++ L + ++++ +A E L
Sbjct: 201 D-MSGSNISLPRMSPTARKLYDALDKSR--QTNEGMHVNVLAPILQVNVNEVYKAAEELL 257
Query: 247 ENSLVY-SIDEFHYK 260
S++Y ++DE +K
Sbjct: 258 GLSIIYHTVDEDTWK 272
>gi|453081572|gb|EMF09621.1| replication protein A, subunit RPA32 [Mycosphaerella populorum
SO2202]
Length = 271
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 17 FMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQL--SELSSNDESSASIDGADVNTITVVG 74
FMP + S+S + TL P+T+KQL + D ID ++ +T VG
Sbjct: 21 FMPGSQNN--ENSASTKRTYGKDTLRPVTIKQLLDAHHPHPDADHFIIDDSETTQVTFVG 78
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWA--------HEQMEFNEVNQISKGMYVRVYGH 126
V ++ + + +DDGTG IE W E + + +G Y RV+G
Sbjct: 79 QVRNISAQTTNVTYKVDDGTGLIEVKVWVDADNFTGEEESGAVKKDKPVEQG-YARVWGR 137
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
LK F +KR + A +R I D NEI HF+E V L G +Q Q +
Sbjct: 138 LKQFNNKRHIGAQYIRAIEDHNEIAYHFLEATVVHL---EFAKGPLDQLQANGQTGQQAT 194
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ +F + + VL L+ N G+H +++Q L + ++ +A + L
Sbjct: 195 TDSGGSGSNFSGVSATARKVLQVLKTNG--NTNEGLHAQMVAQLTGLELVEVYKAGDELM 252
Query: 247 ENSLVY-SIDEFHY 259
+VY ++D+ +
Sbjct: 253 GMGMVYTTVDDLTW 266
>gi|325094396|gb|EGC47706.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
capsulatus H88]
Length = 276
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCD 78
SQA + + KN +L P+T+KQ L ++ ++ IDG +V+ +T VG V
Sbjct: 23 SQAVMEVAKEAGYMKN----SLRPVTIKQTLDATQAHGDADFKIDGTEVSQVTFVGQVRA 78
Query: 79 MQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM-----------------YV 121
+ + +DDGTG IE W +E N VN M Y
Sbjct: 79 VSHLTTFVTYKLDDGTGEIEVKLW----LEKNAVNPTGDDMDTGDAPRSSESEIPINGYA 134
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR--LRGGSSNQPQMTN 179
+V+G L F ++R+ A+ +RPI + +E HF+E + LY TR + G ++ +
Sbjct: 135 KVWGKLNNFNNRRNFVAHVIRPITNIDEYNCHFLEATAIHLYYTRGPVGGHLGDEKPLPG 194
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPM 235
+ H +S F GK++ M + E L+N N G+H ++ + LP+
Sbjct: 195 ATH-------ASGGGPF-AGKTLPPMSPLARKMYETLSNTPQSNEGLHVQHLASLMGLPV 246
Query: 236 DKLMEALESLNENSLVYS 253
++ +A E L +L++S
Sbjct: 247 GEVYKAKEELLSLALIFS 264
>gi|393236050|gb|EJD43601.1| replication protein A, subunit RPA32 [Auricularia delicata
TFB-10046 SS5]
Length = 279
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 34 KNRNVRTLLPMTVKQL-SELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDD 92
K + P+T++ L S++ +S IDG + ++T+VG V ++ + + ++D
Sbjct: 37 KKSTAPPVRPVTIRMLMGAESTHADSGFKIDGHKLESVTIVGKVLKVEKTDTNRRYSLED 96
Query: 93 GTGRIECSRWAHEQ-MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEIT 151
T +IE W Q E +++ + +YVRV G LKAF +KRSL+A ++R + D +EI
Sbjct: 97 STDQIEARYWIDSQATSIPEDDEVVEDVYVRVIGTLKAFNNKRSLHAATVRRVTDHHEIY 156
Query: 152 SHFVECIYVQLYNTR 166
+H ++ I L NT+
Sbjct: 157 AHNMDVIATYLLNTK 171
>gi|240275044|gb|EER38559.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
capsulatus H143]
Length = 265
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 36/238 (15%)
Query: 40 TLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ L ++ ++ IDG +V+ +T VG V + + +DDGTG IE
Sbjct: 28 SLRPVTIKQTLDATQAHGDADFKIDGTEVSQVTFVGQVRAVSHLTTFVTYKLDDGTGEIE 87
Query: 99 CSRWAHEQMEFNEVNQISKGM-----------------YVRVYGHLKAFQDKRSLNAYSL 141
W +E N VN M Y +V+G L F ++R+ A+ +
Sbjct: 88 VKLW----LEKNAVNPTGDDMDTGDAPRSSESEIPINGYAKVWGKLNNFNNRRNFVAHVI 143
Query: 142 RPIIDFNEITSHFVECIYVQLYNTR--LRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG 199
RPI + +E HF+E + LY TR + G ++ + + H +S F G
Sbjct: 144 RPITNIDEYNCHFLEATAIHLYYTRGPVGGHLGDEKPLPGATH-------ASGGGPF-AG 195
Query: 200 KSIDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
K++ M + E L+N N G+H ++ + LP+ ++ +A E L +L++S
Sbjct: 196 KTLPPMSPLARKMYETLSNTPQSNEGLHVQHLASLMGLPVGEVYKAKEELLSLALIFS 253
>gi|258573241|ref|XP_002540802.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901068|gb|EEP75469.1| predicted protein [Uncinocarpus reesii 1704]
Length = 252
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 39/256 (15%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
SS K +L P+T+KQL++ + + ++ ID ++ ++ VG V ++
Sbjct: 6 SSQSGKKATKESLRPVTIKQLNDATQAYTDAEFKIDDTEITQVSFVGQVRNISQLSTFTT 65
Query: 88 FLIDDGTGRIECSRW-------AHEQMEFNEV-------NQISKGMYVRVYGHLKAFQ-D 132
+ +DDGTG IE RW + M+ + NQI YV+V+G L ++ +
Sbjct: 66 YKLDDGTGEIEVKRWLDRSDGMQADPMDTDSAATKRPDKNQIVTNGYVKVWGKLSSYSNN 125
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQ--------MTNSNHLK 184
+RS+ A +RP+ +E HF+E + LY TR + ++P+ MT + K
Sbjct: 126 RRSVTAVVIRPLTSMDEYHCHFLEATSIHLYFTRGPPPNKDKPEAGKGQGSGMTVTG--K 183
Query: 185 EYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALES 244
A+S E S L + G+H ++ LN + + +
Sbjct: 184 PLPALSPMGTKLYEALS------------NTLQSREGLHVQQLASMLNASTSDVRKTCDE 231
Query: 245 LNENSLVY-SIDEFHY 259
L E L++ ++DEF +
Sbjct: 232 LAEQGLIFTTVDEFTW 247
>gi|326435335|gb|EGD80905.1| hypothetical protein PTSG_01490 [Salpingoeca sp. ATCC 50818]
Length = 294
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 32/255 (12%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+ + T+ P+ VKQ+ + D++S ++G V+ + +V ++ ++Q K + + ++D TG
Sbjct: 40 KRISTVTPVCVKQVKDAQRGDDTSFIVNGVAVDKVALVAVIRNVQQKATRISYNVEDHTG 99
Query: 96 RIECSRW------AHEQMEFNEVNQISKGMYVRVYGHLKAFQ-DKRSLNAYSLRPIIDFN 148
I+ ++ E EV Q +G YVR+ ++A + D + LNA+ + PI D N
Sbjct: 100 LIDVMQYLSGGDDEEEPQVPEEVAQNREGRYVRIVASIRAGEDDSKRLNAFLITPIDDHN 159
Query: 149 EITSHFVECIYVQLYNT--------------RLRGGSSNQPQMTNSNHLKEYNAISS-NH 193
E+T HF+ +Y L ++ + RG +Q M N ++ N+
Sbjct: 160 ELTYHFLNVVYANLVSSHGILGERKLGLQAGQPRGSQPSQAGMAGQGMGTATNGATAFNN 219
Query: 194 YSFDEGKSID-QMVLDFLRRPEFLANNNGVHRNVI-----SQQLNLPMDKLMEALES-LN 246
D G + Q VL+ + + E A+ GV + I Q N P ++ A+E LN
Sbjct: 220 TPMDTGLPRNLQAVLNVI-QTEGSASETGVGMSTILDRLRPQGFNEP--QIRSAVEELLN 276
Query: 247 ENSLVYSIDEFHYKS 261
E + ++D+ H+KS
Sbjct: 277 EGQVYSTVDDDHFKS 291
>gi|449273178|gb|EMC82786.1| Replication protein A 32 kDa subunit, partial [Columba livia]
Length = 232
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 39 RTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-I 97
+++LP TV QL + + E + I +++ +T+VG++ + ++ +DD T +
Sbjct: 6 QSILPCTVSQLLA-AEHMEETFRIRDTEISQVTIVGLIRHAEKAPTNVLYKVDDMTAAPM 64
Query: 98 ECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+ +W +E + G YV++ GH+++FQ+K+SL A+ + P+ + NE TSH +E
Sbjct: 65 DVRQWVDTDEAGSENVVVPPGTYVKIAGHVRSFQNKKSLVAFKIMPLENMNEFTSHMLEV 124
Query: 158 IYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLRR---P 213
++ + + + PQ +S + G + Q VL+ ++ P
Sbjct: 125 VHAHMVLRKSHMPAYRVPQSFSSAGTVDMEGYGGGSSLAVNGLTAHQSQVLNLIKNCPVP 184
Query: 214 EFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
E G+ + QL N+ M + +A+E L+ +YS +D+ HYKS
Sbjct: 185 E------GMSLQELKLQLQNMSMSTIKQAVEFLSSEGHIYSTVDDDHYKS 228
>gi|198425641|ref|XP_002126474.1| PREDICTED: similar to p32-subunit of replication protein A [Ciona
intestinalis]
Length = 262
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 17/243 (6%)
Query: 28 PSSSFSKNRNVR--TLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQ 85
P++ K + R ++P+ L E+ S D+S + +V+ +T+VG V ++ +
Sbjct: 27 PAAGGDKQKKFRFHNIVPIFASHLKEIVS-DDSGFKLGNTEVSQVTLVGTVIQVEHSQTC 85
Query: 86 FIFLIDDGTGRIECSRW----AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
+ +DD TG + W E NE + +G VRV+G ++ FQ +LN +
Sbjct: 86 NTYKVDDTTGFVTVKHWNSFTEDEDAPVNE-DVFEEGTPVRVFGQMRVFQKNITLNGLHV 144
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
R + D NEIT H +E ++ +L + G P + +S+N S D G
Sbjct: 145 RKVEDLNEITVHMLEVMHFKLATDAKKKGFDMGPTSSGFQ-----GNVSNNDQSMDLG-- 197
Query: 202 IDQMVLDFLRRPEFLANNNGVH-RNVISQQLNLPMDKLMEALESL-NENSLVYSIDEFHY 259
+D + + + +++G+ N+ S L ++++ +A++ L NE + +ID+ H+
Sbjct: 198 MDSVQTQVWKLIQSATDDDGISITNIRSSLKGLNINQIKKAVDFLCNEGHIYSTIDDDHF 257
Query: 260 KSA 262
K+
Sbjct: 258 KTT 260
>gi|395333488|gb|EJF65865.1| replication protein A subunit RPA32 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 27/271 (9%)
Query: 13 AGGGFMP--SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNT 69
GGG+M SQ + + +L P+++KQL E + + ++ I +V
Sbjct: 12 GGGGYMSQNSQFGSGGGSPGGSGRRAASHSLRPVSLKQLVEATIEHSDADWKIGDVEVGQ 71
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
+TVV V +Q + ++L+DDGT + E +W E + N+++ G YVRV G LK
Sbjct: 72 VTVVAHVLSVQAQTTNCVYLLDDGTAQFEARQWVDANNEEDGSNRVADGRYVRVLGTLKM 131
Query: 130 FQDKRSLNA---YSLRPIIDFNEITSHFVEC-----IYVQLYNTRLRGGSSNQPQMTNSN 181
F KR + A + P +E+ H E I+ + R GS+ +N
Sbjct: 132 FGQKRYITATHIIEIPPERVCDELCFHIAEAAMMSIIFERGPPPRPSEGSTTSRVNGAAN 191
Query: 182 HLKEYNAIS----SNHYSFDEGKSIDQMVLDFL-RRPEFLANNNGVHRNVISQQL----- 231
Y+A S +N + + + +++FL +P+ N G H I++ +
Sbjct: 192 PTSAYSASSNTAGANSAQYAGLSQLQRQIVEFLISQPK---TNEGTHVGAIARHIASLSG 248
Query: 232 NLPM--DKLMEALESLNENSLVY-SIDEFHY 259
P+ D + +AL+ L++ VY ++D+ H+
Sbjct: 249 GAPVNADNISKALDDLSDQGHVYTTVDDSHF 279
>gi|149568055|ref|XP_001518418.1| PREDICTED: replication protein A 32 kDa subunit-like
[Ornithorhynchus anatinus]
Length = 244
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRT--LLPMTVKQLSELSSNDESSASIDGA 65
G ++F GG + S +S F K R ++P TV QL ++ E + I
Sbjct: 13 GGSSFTGGSYTQSPGGFGSPSASQFEKKSRSRAQHIVPCTVSQLLA-ATQVEETFRIGNI 71
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVY 124
+++ +T+VGI+ + ++ +DD T ++ +W +E I YV+V
Sbjct: 72 EISQVTIVGIIRHAEKAPTNIVYKVDDMTAAPMDVRQWVDTDEISSENIVIPPETYVKVA 131
Query: 125 GHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
GHL++FQ+++SL A+ + P+ D NE+T+H +E +
Sbjct: 132 GHLRSFQNRKSLVAFKIIPLEDMNELTTHILETV 165
>gi|327304755|ref|XP_003237069.1| hypothetical protein TERG_01792 [Trichophyton rubrum CBS 118892]
gi|326460067|gb|EGD85520.1| hypothetical protein TERG_01792 [Trichophyton rubrum CBS 118892]
Length = 290
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 39 RTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
R++ P+T+KQL++ + E+ ID AD+N + VG V ++ + +DDGTG
Sbjct: 34 RSVRPVTIKQLNDATQAFPEAPFKIDNADINQVCFVGQVRNVNKLATHITYKLDDGTGET 93
Query: 98 ECSRW--AHEQMEFNEVN-----------------------------QISKGMYVRVYGH 126
+ + E+ F+E+ QI+ Y +V+ +
Sbjct: 94 DVKYFIPPEEKEAFDELEAMDVMAMDGAGSNAGPAAVTNKSGRPRAYQITTNGYAKVFAN 153
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+K F D+R +NA +RPI + NE HF+E V L+ T+ + +
Sbjct: 154 VKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLHFTKGPPPKAGGASGAGAGTGGGA 213
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ ++ S + + + D L N G+H NV++ + + ++++ +A E L
Sbjct: 214 MDMGGSNLSLPRMSPMARKLYDALSNSR--QTNEGMHVNVLAPIMQVNVNEVYKAAEELL 271
Query: 247 ENSLVY-SIDEFHYK 260
S++Y ++DE +K
Sbjct: 272 GLSVIYHTVDEDTWK 286
>gi|328853181|gb|EGG02321.1| hypothetical protein MELLADRAFT_44876 [Melampsora larici-populina
98AG31]
Length = 256
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 11 AFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNT 69
+ GGGF+ + P +K + TL P+T+KQ E + ++SA I +V
Sbjct: 5 GYDGGGFLQGSQSNTQSPGGGKAKAES--TLRPVTIKQAMEAHFPHSDASAYIQDVEVAH 62
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAH----EQMEFNEVNQISKGMYVRVYG 125
++ IV ++ + +F ++DGTG +E +W E + + + +VRV G
Sbjct: 63 VSFCAIVREIARHDSNVLFRMEDGTGTVEARKWRESNDGETEGLDPETGVQERDWVRVVG 122
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL-YNTRLRGG 170
+ F KR +NA + I DFN+I H+++ + V L Y+ GG
Sbjct: 123 KINNFNSKRYVNASRITKITDFNQINYHYLDAMRVTLEYDRGSSGG 168
>gi|355717107|gb|AES05825.1| replication protein A2, 32kDa [Mustela putorius furo]
Length = 293
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 124/249 (49%), Gaps = 25/249 (10%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P S + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 54 PTLSQAEKKSRARAQHIVPCTISQLLSATLVDEM-FKIGNVEISQVTIVGIIRHAEKAPT 112
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 113 NIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 172
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQP-----QMTNSNHLKEYNAISSNHYSFDE 198
+ D NE T+H +E + + ++ S++QP M+N + E N
Sbjct: 173 LEDMNEFTTHILEVVNAHMILSK----SNSQPPAGREPMSNPG-MGETGIFGGNSSIPAN 227
Query: 199 GKSIDQ-MVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS 253
G ++ Q VL+ ++ RPE G++ + QL ++ + + +A++ L+ +YS
Sbjct: 228 GLTVAQNQVLNLIKACPRPE------GLNFQDLKNQLHHMTVASIKQAVDFLSNEGHIYS 281
Query: 254 -IDEFHYKS 261
+D+ H+KS
Sbjct: 282 TVDDDHFKS 290
>gi|302665672|ref|XP_003024445.1| possible replication factor-a protein [Trichophyton verrucosum HKI
0517]
gi|291188498|gb|EFE43834.1| possible replication factor-a protein [Trichophyton verrucosum HKI
0517]
Length = 284
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 35/255 (13%)
Query: 39 RTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
R++ P+T+KQL++ + E+ ID AD+N + VG V ++ + +DDGTG
Sbjct: 28 RSVRPVTIKQLNDATQAFPEAPFKIDNADINQVCFVGQVRNVNKLATHITYKLDDGTGET 87
Query: 98 ECSRW--AHEQMEFNEV-----------------------------NQISKGMYVRVYGH 126
+ + E+ F+E+ +QI+ Y +V+ +
Sbjct: 88 DVKYFIPPEEKEAFDELEAMDVMAMDGAGSNAGPAAVTNKSGRPRAHQITTNGYAKVFAN 147
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+K F D+R +NA +RPI + NE HF+E V LY T+ + T +
Sbjct: 148 VKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLYFTKGPPPKAGGASGTGAGTGGGA 207
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ ++ S + + + + L N G+H NV++ + + ++++ +A E L
Sbjct: 208 MDMGGSNLSLPRISPMARKLYNALSNSR--QTNEGMHVNVLAPIMQVNVNEVYKAAEELL 265
Query: 247 ENSLVY-SIDEFHYK 260
S++Y ++DE +K
Sbjct: 266 GLSVIYHTVDEDTWK 280
>gi|194384978|dbj|BAG60901.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 117/242 (48%), Gaps = 17/242 (7%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P PS + K+R + ++P T+ QL + DE I +++ +T+VGI+ +
Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPT 88
Query: 85 QFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
++ ++ +W +E + YV+V GHL++FQ+K+SL A+ + P+
Sbjct: 89 NIVY-----AAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPL 143
Query: 145 IDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ 204
D NE T+H +E I + ++ S ++ + E N + G ++ Q
Sbjct: 144 EDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVAQ 203
Query: 205 -MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHY 259
VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H+
Sbjct: 204 NQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHF 258
Query: 260 KS 261
KS
Sbjct: 259 KS 260
>gi|149695006|ref|XP_001500549.1| PREDICTED: replication protein A 32 kDa subunit-like [Equus
caballus]
Length = 252
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 116/229 (50%), Gaps = 16/229 (6%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE+ I +++ +T+VGI+ + ++ IDD T ++
Sbjct: 28 IVPCTISQLLSATLIDEAF-KIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 86
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
+W E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E +
Sbjct: 87 RQWVDTDDTSGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVN 146
Query: 160 VQLY----NTRLRGG--SSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRP 213
+ N++ G S + P M + + + + +N + + + ++ ++ RP
Sbjct: 147 AHMMLNKANSQPPAGRASISNPGMGEAGNFGGNSLMPANGLTVAQNQVLN--LIKACPRP 204
Query: 214 EFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
E L +++ +Q ++ + + +A++ L+ +YS +D+ H+KS
Sbjct: 205 EGLN-----FQDLKNQLQHMAVASIKQAVDFLSNEGHIYSTVDDDHFKS 248
>gi|326473024|gb|EGD97033.1| hypothetical protein TESG_04455 [Trichophyton tonsurans CBS 112818]
gi|326477277|gb|EGE01287.1| replication protein A [Trichophyton equinum CBS 127.97]
Length = 289
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 39 RTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
R++ P+T+KQL++ + E+ ID AD+N + VG V ++ + +DDGTG
Sbjct: 34 RSVRPVTIKQLNDATQAFPEAPFKIDNADINQVCFVGQVRNVNKLATHITYKLDDGTGET 93
Query: 98 ECSRW--AHEQMEFNEVN-----------------------------QISKGMYVRVYGH 126
+ + E+ F+E+ QI+ Y +V+ +
Sbjct: 94 DVKYFIPPEEKEAFDELEAMDVMAMDGAGSNAGPAAVTNKSGRPRAYQITTNGYAKVFAN 153
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+K F D+R +NA +RPI + NE HF+E V L+ T+ +
Sbjct: 154 VKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLHFTKGPPPKAGGSGAGAGTGGGAM 213
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ +SN S + + + D L N G+H NV++ + + ++++ +A E L
Sbjct: 214 DMGASN-LSLPRMSPMARKLYDALSNSR--QTNEGMHVNVLAPIMQVNVNEVYKAAEELL 270
Query: 247 ENSLVY-SIDEFHYK 260
S++Y ++DE +K
Sbjct: 271 GLSVIYHTVDEDTWK 285
>gi|303313413|ref|XP_003066718.1| OB-fold nucleic acid binding domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240106380|gb|EER24573.1| OB-fold nucleic acid binding domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 295
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 25/254 (9%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
+S K N +L P+T+KQL++ + + ++ ID +V ++ VG + ++
Sbjct: 34 ASQSGKTYNKSSLRPVTIKQLNDATQAYSDADFKIDDTEVAQVSFVGQIRNISQLSTFIT 93
Query: 88 FLIDDGTGRIECSRW-----AHE--QMEFNEVNQISKGM-------YVRVYGHLKAFQ-D 132
+ +DDGTG IE +W HE M+ ++ G Y +V+G L +F +
Sbjct: 94 YKLDDGTGEIEVKKWLDNEERHEGDAMDTSDPTTGRTGKKELVVNGYAKVWGKLGSFSNN 153
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSN 192
+RS+ A+ +RP+ + +E HF+E + LY S + ++ + A+ S+
Sbjct: 154 RRSVTAHVIRPLTNMDEYHCHFLEATAIHLYFKHGPPPSKDAADVSKAQTSGSGGAMRSD 213
Query: 193 HYSFDEGKSIDQMVLDFLRRPEFLANNN------GVHRNVISQQLNLPMDKLMEALESLN 246
+ +++ M + R F NN G+H ++ + P+D + +A LN
Sbjct: 214 NSMAAGERTLPPMSP--MARKLFNTLNNTPQSREGLHLQHLASLMQAPVDNVEKAARELN 271
Query: 247 ENSLVY-SIDEFHY 259
+ SL+Y ++D++ +
Sbjct: 272 DLSLIYPTVDDYTW 285
>gi|413939583|gb|AFW74134.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 172
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Query: 111 EVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+V+ +S+ GMY+ V G LK Q+++ A+S+RPI DFNE+T HF++C+ + + NT L+
Sbjct: 24 DVHWLSRNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKA 83
Query: 170 GSSNQPQMTNSNHLKEYN----------AISSNHYSFDEGKS---IDQMVLDFLRRPEFL 216
GS P NS+ ++ ++ S+ G S + VL+F P L
Sbjct: 84 GS---PARINSSMGVSFSNGFSESSTPTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANL 140
Query: 217 ANNNGVHRNVISQQLNLPMDKLMEALESLN 246
+ +GVH + + ++ L K + SL+
Sbjct: 141 ESEHGVHVDEVLKRFKLLPKKQITYSSSLH 170
>gi|225712258|gb|ACO11975.1| Replication protein A 32 kDa subunit [Lepeophtheirus salmonis]
gi|290561278|gb|ADD38041.1| Replication protein A 32 kDa subunit [Lepeophtheirus salmonis]
Length = 257
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 14 GGGF-MPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITV 72
GGGF P + P +S K + L+P+ + SE+ E + S++G +V I++
Sbjct: 6 GGGFNTPGGLSQTPGGTSGDKKRTRAQNLVPVAI---SEILDCTEETLSVEGKEVGMISI 62
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQD 132
+G V + ++ + I+ + DGTG+I+ +W + E N + IS+ RV G ++ Q
Sbjct: 63 LGKVESITNEATKSIYSLKDGTGKIDVIQWLDDGQE-NTNDNISEDSRCRVIGTVRNSQG 121
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR 168
K+ + A+ L P+ EI H +E Y +L +L+
Sbjct: 122 KKHVMAFKLTPVTSQEEIKGHALEIEYAKLKIRQLK 157
>gi|320036333|gb|EFW18272.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 297
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
+S K N +L P+T+KQL++ + + ++ ID +V ++ VG + ++
Sbjct: 36 ASQSGKTYNKSSLRPVTIKQLNDATQAYSDADFKIDDTEVAQVSFVGQIRNISQLSTFIT 95
Query: 88 FLIDDGTGRIECSRW-----AHE--QMEFNEVNQISKGM-------YVRVYGHLKAFQ-D 132
+ +DDGTG IE +W HE M+ ++ G Y +V+G L +F +
Sbjct: 96 YKLDDGTGEIEVKKWLDNEERHEGDAMDTSDPTTGRTGKKELVVNGYAKVWGKLGSFSNN 155
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSN 192
+RS+ A+ +RP+ + +E HF+E + LY S + + + A+ S+
Sbjct: 156 RRSVTAHVIRPLTNMDEYHCHFLEATAIHLYFKHGPPPSKDSADASKAQTSDSGGAMRSD 215
Query: 193 HYSFDEGKSIDQMVLDFLRRPEFLANNN------GVHRNVISQQLNLPMDKLMEALESLN 246
+ +++ M + R F NN G+H ++ + P+D + +A LN
Sbjct: 216 NSMAAGERTLPPMSP--MARKLFNTLNNTPQSREGLHLQHLASLMQAPVDNVEKAARELN 273
Query: 247 ENSLVY-SIDEFHY 259
+ SL+Y ++D++ +
Sbjct: 274 DLSLIYPTVDDYTW 287
>gi|395854820|ref|XP_003799877.1| PREDICTED: replication protein A 32 kDa subunit isoform 1 [Otolemur
garnettii]
Length = 271
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 123/245 (50%), Gaps = 19/245 (7%)
Query: 28 PSSSFSKNRN---VRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P+S+ S+ ++ + ++P T+ QL + DE I +++ + +VGI+ +
Sbjct: 31 PTSTQSERKSRARAQHIVPCTISQLLSATLVDEV-FKIGNVEISQVIIVGIIRHTEKAPT 89
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P
Sbjct: 90 NIVYKIDDMTAAPMDVRQWVDTDDTGSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMP 149
Query: 144 IIDFNEITSHFVECIYVQLYNTRLRGGSSNQP-QMTNSNH-LKEYNAISSNHYSFDEGKS 201
+ D NE T+H +E + + T + S P ++ SN + E + + G +
Sbjct: 150 LEDMNEFTAHILEVVNAHM--TLSKANSQPPPGRVPISNPGMSEAGSFGGTSFMPANGLT 207
Query: 202 IDQ-MVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDE 256
Q VL+ ++ RPE L ++ +Q ++P+ + +A++ L+ +YS +D+
Sbjct: 208 AAQNQVLNLIKACPRPEGLN-----FYDLKNQLKHMPVASIKQAVDFLSNEGHIYSTVDD 262
Query: 257 FHYKS 261
H+KS
Sbjct: 263 DHFKS 267
>gi|410730457|ref|XP_003671408.2| hypothetical protein NDAI_0G03880 [Naumovozyma dairenensis CBS 421]
gi|401780226|emb|CCD26165.2| hypothetical protein NDAI_0G03880 [Naumovozyma dairenensis CBS 421]
Length = 284
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID-GADVN 68
++ GGGF + V S S N TL P+TVKQ+ E + + + +++
Sbjct: 11 SSVTGGGF---ETNDVVGQSGDVSDRSNTNTLRPVTVKQILESTQEIQDGPFVSYNQELH 67
Query: 69 TITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEF------------NEVNQIS 116
+ VG++ ++ D ++DGTG+IE +W+ + + + +Q++
Sbjct: 68 HVCFVGVIRNITDHTSNIYLTVEDGTGQIEVRKWSEDANDMASGPGDDSDPTKDSSSQVA 127
Query: 117 K----GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI-YVQLYNTRL---- 167
+ G YV+++G LK F K+++ ++ I FNE+ +H +E I + + N +L
Sbjct: 128 QQYQIGTYVKIFGALKEFGGKKNIQYAVIKNIESFNEVLTHHLEVIKWHAIANGKLPDPS 187
Query: 168 RGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRN 225
GGSS+Q Q + S + +S +L+F ++ AN V
Sbjct: 188 TGGSSSQVQEGQQQSTSGQSLFVSEN-DSSSSRSPSDRILEFCKKQCEGKDANTFAVPIP 246
Query: 226 VISQQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
+ISQ LN+ + +L E +Y + D+ H+
Sbjct: 247 LISQSLNIDENTTRNCCATLTEQGFIYPTFDDNHF 281
>gi|336364908|gb|EGN93261.1| hypothetical protein SERLA73DRAFT_189801 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377482|gb|EGO18644.1| hypothetical protein SERLADRAFT_480906 [Serpula lacrymans var.
lacrymans S7.9]
Length = 276
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
P +N +L PMT+ QL + S ++ ++ +D ++ +TVVG V +Q +
Sbjct: 31 PGGFGRRNEVSHSLRPMTIHQLQDASQAHSDADWMLDETEIGQVTVVGQVVSIQSQATNS 90
Query: 87 IFLIDDGTGRIECSRWAHEQM--EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
++ +DDGTGRIE W + + + + +G YVRV G+LK F +KR +NA +R +
Sbjct: 91 LYWLDDGTGRIEARHWTDSSLTESSEKWDGVLEGTYVRVLGNLKMFGNKRYINATHIRNV 150
Query: 145 IDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN------------SNHLKEYNAISSN 192
+EI H +E + V L R G P T+ + K+ ++ +SN
Sbjct: 151 QSPDEIYFHLLEAMTVTLTWER---GPPPGPGQTHRLGAVANAPGAAAAVYKQSHSTASN 207
Query: 193 HYSFDEGKSIDQMVLDF-LRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLV 251
+ ++ Q ++ F L +P + GVH I++ + + +AL+ L + V
Sbjct: 208 E-QYAHLPALQQSIISFILSQP---TSTEGVHVGAIARAVGGDAITISDALDKLMDEGHV 263
Query: 252 YS-IDEFHYKSA 262
+S I++ H+ A
Sbjct: 264 FSTINDSHFNVA 275
>gi|281351626|gb|EFB27210.1| hypothetical protein PANDA_001185 [Ailuropoda melanoleuca]
Length = 231
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 117/229 (51%), Gaps = 16/229 (6%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE I +++ +TVVGI+ + ++ +DD T ++
Sbjct: 7 IVPCTISQLLSATLVDEM-FKIGNVEISQVTVVGIIRHAEKAPTNIVYKLDDMTAAPMDV 65
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
+W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E +
Sbjct: 66 RQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVN 125
Query: 160 VQLY----NTRLRGGSS--NQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRP 213
+ N++ G + + P M + + +++ +N + + + ++ ++ RP
Sbjct: 126 AHMTLSKSNSQPPAGRAPISNPGMGETANFGGNSSMPANGLTVAQNQVLN--LIKACPRP 183
Query: 214 EFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
E L +++ +Q ++ + + +A++ L+ +YS +D+ H+KS
Sbjct: 184 EGLN-----FQDLKNQLQHMTVASIKQAVDFLSNEGHIYSTVDDDHFKS 227
>gi|367008190|ref|XP_003678595.1| hypothetical protein TDEL_0A00520 [Torulaspora delbrueckii]
gi|359746252|emb|CCE89384.1| hypothetical protein TDEL_0A00520 [Torulaspora delbrueckii]
Length = 283
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 26/248 (10%)
Query: 26 PDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASIDGADVNTITVVGIVCDMQDKEP 84
P+ S S TL P+T+KQ+ + + ID ++ ++ VG+V ++ D+
Sbjct: 28 PNSSESGGAQGRFTTLTPVTIKQILQSQQQVQDGPFVIDQQELFHVSFVGVVRNIVDETS 87
Query: 85 QFIFLIDDGTGRIECSRWA----------HEQMEFNEVNQISK----GMYVRVYGHLKAF 130
I+DGTG+I+ +W+ E ++ N +Q+++ G YV+V+G LK F
Sbjct: 88 NVRLTIEDGTGQIDVKKWSADPNDVAASQDENLKKNYSSQVAQQYHIGTYVKVFGALKEF 147
Query: 131 QDKRSLNAYSLRPIIDFNEITSHFVECI-YVQLYNTRLRGGSSN-QPQMTNSNHLKEYNA 188
K+ + ++ I FNE+ +H +E I + + N + +N Q T SN+
Sbjct: 148 GGKQHVQYALIKNIESFNEVITHHLEVIKWFTISNGKFSPSKANADEQATTSNNGPSLFV 207
Query: 189 ISSNHYSFDEGKSIDQMVLDFLRRPEFLA----NNNGVHRNVISQQLNLPMDKLMEALES 244
S+ S D G + Q VL F R E A NN V +I+Q LNL + + +
Sbjct: 208 RESD--SHDTGNPL-QRVLAFCR--EQCAGKDPNNFAVQVQLIAQSLNLDETTVRDCCTT 262
Query: 245 LNENSLVY 252
L E +Y
Sbjct: 263 LTEQGFIY 270
>gi|353243302|emb|CCA74860.1| related to RFA2-DNA replication factor A, 36 kDa subunit
[Piriformospora indica DSM 11827]
Length = 292
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 124/262 (47%), Gaps = 34/262 (12%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQ--LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQ 85
P + ++ + ++L P++++Q L+E S+ E+ ++DG ++ I++VG + + +
Sbjct: 32 PHGAGTERKQTQSLRPLSIRQVLLAEQGSHTETDYTLDGVTLSMISIVGQIINHTSQTTS 91
Query: 86 FIFLIDDGTGRIECSRWAHEQ------MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAY 139
++ I+DG+ IE W + ME +E ++K +V++ G ++ FQ++R +NA
Sbjct: 92 DVYKINDGSAEIEARHWNDSKGTDSMDMESDESPLLNK--FVKITGTIRTFQERRHINAI 149
Query: 140 SLRPIIDFNEITSHFVECIYVQL---YNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYS- 195
+R + D E H+ E I + + + GSS MT +Y+ ++ +
Sbjct: 150 IVRALDDPMEAYFHYTEAIAMAMLAKFGPPNGSGSSLGAPMTGGASASDYSRQGTSRQTN 209
Query: 196 -----FDEGKSIDQMVLDFLRRPEFLANNNGVH-RNVISQQLNL-----------PMDKL 238
+ +D+ ++ F++ + + G H R +I L P D
Sbjct: 210 EVDSMYAHLAVLDRGIIRFIK--DNPPTSEGYHVRQIIKAVKPLVNEETSKTGEDPADAF 267
Query: 239 MEALESLNENSLVYS-IDEFHY 259
A++ L E L++S +DE HY
Sbjct: 268 AAAIQRLIEEGLLFSTLDEHHY 289
>gi|367008012|ref|XP_003688735.1| hypothetical protein TPHA_0P01430 [Tetrapisispora phaffii CBS 4417]
gi|357527045|emb|CCE66301.1| hypothetical protein TPHA_0P01430 [Tetrapisispora phaffii CBS 4417]
Length = 264
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 36/258 (13%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITV 72
GGGF S + SS + + TL P+T+KQ+ E + I ++++I
Sbjct: 13 GGGFDNSDSRI----GSSDGEVKRTNTLTPVTIKQILESKPLVQDGPFVIHNQELHSICF 68
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEF---------NEVNQISK----GM 119
VG++ ++ D+ I+DGTG+IE +W+ + + + +Q+SK G
Sbjct: 69 VGVIRNISDQTQSIFLTIEDGTGQIEVRKWSEDANDLAAGDEDKNGAQDSQLSKQHEIGS 128
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQ-LYNTRLRG-GSSN-QPQ 176
YV VYG LK F K+++ ++ I FNE+ +H +E I + N +++G G+SN Q Q
Sbjct: 129 YVIVYGALKEFGGKKNVQYAVIKNIKSFNEVIAHHLEVIKSHAIANGKMKGVGASNDQGQ 188
Query: 177 MTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNN--GVHRNVISQQLNLP 234
D G + Q +LDF + + N V +++Q LNL
Sbjct: 189 QLFVTE------------GSDAGAPL-QRILDFCKEQCTGKDPNSFAVAIQLMTQTLNLD 235
Query: 235 MDKLMEALESLNENSLVY 252
+ E +L E +Y
Sbjct: 236 ETVVRECCNTLTEQGYIY 253
>gi|300707613|ref|XP_002996007.1| hypothetical protein NCER_100966 [Nosema ceranae BRL01]
gi|239605263|gb|EEQ82336.1| hypothetical protein NCER_100966 [Nosema ceranae BRL01]
Length = 218
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 27 DPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA-SIDGADVNTITVVGIVCDMQDKEPQ 85
+PSS + ++T+ +T+KQ+ D S+ +D +++T+ ++G V ++
Sbjct: 7 NPSSPKKEYTGIKTIRSLTIKQVLSAEHEDGSTVIYVDNKELSTLKIIGWVYSVKSTNSG 66
Query: 86 FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPII 145
F+++DGTG IEC WA+ E + I G+ VR+ G LK F K+++ ++ +
Sbjct: 67 KTFIVEDGTGEIECMLWANRAYEEYMASFIEDGILVRIVGTLKEFLGKKNITVSNIYVVE 126
Query: 146 DFNEITSHFVECI 158
D+NE+ H + +
Sbjct: 127 DYNELLYHMITAV 139
>gi|261193385|ref|XP_002623098.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239588703|gb|EEQ71346.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239613975|gb|EEQ90962.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis ER-3]
Length = 286
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 33/235 (14%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ E + ++ ++ IDG +V+ + VG V + + +DDGTG IE
Sbjct: 50 SLRPVTIKQTLEATQAHGDADFKIDGTEVSQLAFVGQVRAVSHLTTFVTYKLDDGTGEIE 109
Query: 99 CSRWAHEQMEFNEVNQISKGM-----------------YVRVYGHLKAFQDKRSLNAYSL 141
W +E N VN M Y +V+G L F ++R+ A+ +
Sbjct: 110 VKLW----LEKNAVNPTGDDMDTGDASRSSESEIQVNGYAKVWGKLNNFNNRRNFVAHVI 165
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
RPI +E HF+E + LY T RG + QP A S++ G++
Sbjct: 166 RPITSMDEYHCHFLEATAIHLYYT--RGPTGGQPGGNAPP-----GAASTSGGDPLGGRT 218
Query: 202 IDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ M + E L+N N G+H ++ + LP+ ++ + E L + L+Y
Sbjct: 219 LPPMSPLARKVYETLSNTPQGNEGLHVQNLASMMGLPVGEVFKGSEELLSHGLIY 273
>gi|327353325|gb|EGE82182.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 280
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 33/235 (14%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ E + ++ ++ IDG +V+ + VG V + + +DDGTG IE
Sbjct: 44 SLRPVTIKQTLEATQAHGDADFKIDGTEVSQLAFVGQVRAVSHLTTFVTYKLDDGTGEIE 103
Query: 99 CSRWAHEQMEFNEVNQISKGM-----------------YVRVYGHLKAFQDKRSLNAYSL 141
W +E N VN M Y +V+G L F ++R+ A+ +
Sbjct: 104 VKLW----LEKNAVNPTGDDMDTGDASRSSESEIQVNGYAKVWGKLNNFNNRRNFVAHVI 159
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
RPI +E HF+E + LY T RG + QP A S++ G++
Sbjct: 160 RPITSMDEYHCHFLEATAIHLYYT--RGPTGGQPGGNAPP-----GAASTSGGDPLGGRT 212
Query: 202 IDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ M + E L+N N G+H ++ + LP+ ++ + E L + L+Y
Sbjct: 213 LPPMSPLARKVYETLSNTPQGNEGLHVQNLASMMGLPVGEVFKGSEELLSHGLIY 267
>gi|448107403|ref|XP_004205356.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
gi|448110394|ref|XP_004201620.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
gi|359382411|emb|CCE81248.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
gi|359383176|emb|CCE80483.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
Length = 254
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 16/219 (7%)
Query: 40 TLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ++E + + ++ D+N ++ VG+V ++ D + I+DGTG IE
Sbjct: 37 SLTPVTIKQITEATQPIPDGEFQVNNVDLNLVSFVGVVRNVNDITSAVLITIEDGTGSIE 96
Query: 99 CSRWAHEQMEF--NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
RW E +E + YV V G LK F K++L ++R I D NE+ H +
Sbjct: 97 VRRWIDESTNASESEAQKYELNKYVYVTGALKEFNGKKNLQHATIRGITDHNEVVYHHLN 156
Query: 157 CIYVQLYNTRL--RGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPE 214
I L + L R G+S N +K+ N + D S+ + + R
Sbjct: 157 AIAHHLKSQGLSTRPGTSGGD---NGLFVKDSNGM-------DLPGSLQDRIFSVI-RDN 205
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+ GV IS +LN D +ME L +YS
Sbjct: 206 TSSMQEGVPVPFISSKLNTTDDVVMELCSELINEGKIYS 244
>gi|406601731|emb|CCH46664.1| Replication protein A 32 kDa subunit [Wickerhamomyces ciferrii]
Length = 250
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 28/256 (10%)
Query: 9 AAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGA--- 65
A+ + GG + S S ++ + +L P+T+KQ+ ND DG
Sbjct: 2 ASDYNGGDYNTSGGFDSTGGGSQGTRTQTKNSLTPVTIKQI-----NDSKPIIQDGEFVV 56
Query: 66 ---DVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
++N ++ VG++ + D I+DGTG IE +W + + + I G YV
Sbjct: 57 HNLELNLVSFVGVIRKVTDNTSNLQVQIEDGTGSIELRKWVDDNAQEDANTFIRDGKYVY 116
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
V G +K F K+++ + R I D+NE+ H + I L S TN
Sbjct: 117 VTGSVKEFGGKKNIQHTTFREITDYNEVLYHHLSAIDSHLKAQGTIKSDSGAQGSTNGLF 176
Query: 183 LKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNN-----GVHRNVISQQLNLPMDK 237
+ +A + S + R E+++ N GV +I+Q LNL +D
Sbjct: 177 VSGPSASETGGLSTAD------------RIHEYISENTPSMPEGVPVQLIAQNLNLLVDD 224
Query: 238 LMEALESLNENSLVYS 253
++ L E++ +Y+
Sbjct: 225 VILHCGKLTEDAKIYA 240
>gi|307211053|gb|EFN87305.1| Replication protein A 32 kDa subunit [Harpegnathos saltator]
Length = 238
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVV 73
GGGF+ ++ + N R+++P+ +KQ++ + + I G VNT+T V
Sbjct: 10 GGGFL-DESVSGAQTGGKKGAQSNDRSIVPVLIKQITSTTGD----LQIAGKTVNTLTFV 64
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
GIV ++ + + + I D T + W + + N + I YVRV+G ++ ++
Sbjct: 65 GIVRHIEQETTKISYHIQDDTDTLTAMMWL--EADKNSIEDIQINTYVRVHGLIRDQNNQ 122
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
R + + P+ D NE+T HFVE IY L +R
Sbjct: 123 RHILILRIYPLEDLNELTCHFVEVIYFMLKFSR 155
>gi|392567166|gb|EIW60341.1| replication protein A subunit RPA32 [Trametes versicolor FP-101664
SS1]
Length = 292
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 41 LLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
L P+T+KQL E S ++ ++ +I +V +TVV V +Q + I+L++DGT +E
Sbjct: 51 LRPVTLKQLVEASQAHSDADWTIGDVEVGQVTVVAQVLSIQPQTTNCIYLLNDGTANMEA 110
Query: 100 SRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+W A+ E ++I + Y+RV G LK F +KR + A ++P +E+ H +E
Sbjct: 111 RQWVDANTDDENGSKDEIKESTYIRVLGSLKVFGNKRYITATHIKPYKGEDELFFHILEA 170
Query: 158 IYVQLYNTRLRG-------------GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ 204
V L T RG +N S + + + +++ F + +
Sbjct: 171 ATVTL--TFERGPPPRPSEGAHALMNRANTAAAGQSAYTAQSSTTAASTGQFAHFAPLQR 228
Query: 205 MVLDFL-RRPEFLANNNGVHRNVISQQL-NLPMD-----KLMEALESLNENSLVYS-IDE 256
++ F+ +P+ ++ GVH I++ + L D + +AL+ L + VYS ID+
Sbjct: 229 EIMQFIVSQPK---SDEGVHVAAIARHVATLGPDLGNAHSISQALDHLMDQGHVYSTIDD 285
Query: 257 FHY 259
H+
Sbjct: 286 SHF 288
>gi|116196082|ref|XP_001223853.1| hypothetical protein CHGG_04639 [Chaetomium globosum CBS 148.51]
gi|88180552|gb|EAQ88020.1| hypothetical protein CHGG_04639 [Chaetomium globosum CBS 148.51]
Length = 267
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 40 TLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
TL P+T+KQL + S ++DG +T+VG V + + IDDGTG I+
Sbjct: 35 TLRPVTIKQLVDCKEPYPGSELAVDGLPTTQVTLVGQVRSSTVQSIYTTYRIDDGTGLID 94
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
++ V + YVRV+G L ++ KR++ A+++R I DFNE+ H +E
Sbjct: 95 VKKFVDSDRPDTAVT-FAPDTYVRVFGRLMSYNGKRTVTAHNIRAIDDFNEVNYHLLEAT 153
Query: 159 YVQLYNTR 166
YV L T+
Sbjct: 154 YVHLALTK 161
>gi|255580401|ref|XP_002531027.1| conserved hypothetical protein [Ricinus communis]
gi|223529380|gb|EEF31344.1| conserved hypothetical protein [Ricinus communis]
Length = 80
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 8/81 (9%)
Query: 143 PIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH---LKEYNAISSNHYSFDEG 199
PI DFNEITSHF+ECIYV YNT++RG ++ QPQ+ +S LK Y N S G
Sbjct: 1 PITDFNEITSHFIECIYVHFYNTKIRGATT-QPQLASSTMNTPLKGYQTGPQNQASAFSG 59
Query: 200 K----SIDQMVLDFLRRPEFL 216
++ Q++L+FL++P +L
Sbjct: 60 ADGVNNVGQLILNFLQQPMYL 80
>gi|440888615|gb|ELR44580.1| hypothetical protein M91_12762 [Bos grunniens mutus]
Length = 251
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRN---VRTLLPMTVKQLSELSSNDESSASIDGAD 66
++F G G P++S +K ++ + ++P T+ QL + DE I +
Sbjct: 12 SSFGGAGGYTQSPGGFGSPTASQAKKKSRAQAQHIVPCTISQLLSATLVDEI-FRIGNVE 70
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTG-RIECSRWAHEQMEFNEVNQISKGMYVRVYG 125
++ +T+VGI+ + + ++ IDD T ++ +W ++ + YV+V G
Sbjct: 71 ISRVTIVGIIRNAEKAATNIVYKIDDMTTVPVDVRQWVDTDDASSKNTVVPPETYVKVAG 130
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY----NTRLRGGSS--NQPQMTN 179
HL++FQ+K+SL A+ + P+ D NE T+H +E + + N++ G + ++P M
Sbjct: 131 HLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGRAPISKPGMGE 190
Query: 180 SNHLKEYNAISSNHYSFDEGKSID 203
+ + N I +N + + + ++
Sbjct: 191 AGNFSGNNFIPANDLTVAQNQVLN 214
>gi|429858001|gb|ELA32837.1| putative replication factor-a protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 256
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 39/215 (18%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ+ + + + IDGA V +T V + + + +DDGTG IE
Sbjct: 68 SLRPVTIKQIIDAEEAYPGADFKIDGATVTQVTFVAQIRQISPQPTNITLKLDDGTGLIE 127
Query: 99 CSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W + ++ + +VRV+G +K+F KR + A+ +RP+ DFNE+ H +E
Sbjct: 128 AKKWVDTDKKDDDAAGLDLEGHVRVWGRIKSFNGKRHVGAHFIRPVTDFNEVNYHLLEST 187
Query: 159 YVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLAN 218
Y LRG S +M N F+
Sbjct: 188 Y-------LRGCSVAAQKMFN-----------------------------FINNAP--GG 209
Query: 219 NNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
N GVH N IS L + +M A + L L+Y+
Sbjct: 210 NEGVHINQISTGAGLSIRDVMGAADELLGQGLIYT 244
>gi|443686965|gb|ELT90082.1| hypothetical protein CAPTEDRAFT_218725 [Capitella teleta]
Length = 261
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 17/233 (7%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P+TV Q+ N ++ D +++ ++++GIV + + + + IDD T R +E
Sbjct: 30 VIPVTVAQVLAAQQNGDNLI-WDEIELHQVSILGIVRSVNENPTRLEYFIDDLTARPLEV 88
Query: 100 SRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
++ A E ++ + + YV+V+G ++ FQ KRS+NA+ + + D N IT+H +E
Sbjct: 89 RQFVDADENAPEDKTDIARENQYVQVFGTIRDFQGKRSINAFKILQVADANTITTHLLEV 148
Query: 158 IYVQLYNTRLR----GGSSNQPQMTNSNHLKEYNA---ISSNHYSFDEGKSIDQMVLDFL 210
I+ L + + GS Q SN A SNH D+G + Q + +
Sbjct: 149 IHAHLALKKAKIASEAGSWAQTAEGYSNATSNPPAAMSFGSNH--MDQGLTPTQAQVHNV 206
Query: 211 RRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS-IDEFHYKS 261
R + + G+ + I+ L +P + +A+E L+ +YS +D+ HY+S
Sbjct: 207 IRA--CSEDQGMSVHTITDNLRGIPQKAIRDAIEFLSAEGHIYSTVDDEHYRS 257
>gi|427778005|gb|JAA54454.1| Putative replication protein a 32 kda subunit [Rhipicephalus
pulchellus]
Length = 238
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 121/233 (51%), Gaps = 23/233 (9%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ Q+ + + S +I +V +++VG+V + + + F +DD TG IE
Sbjct: 21 VVPCTIAQIHMMG---QDSLTIGDLEVQYVSLVGLVTSVDQQSTRVNFTLDDRTGPPIEG 77
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
+A E+ + ++ + +G YVRV G +++ + KR L A+ + P+ D NE+T H E ++
Sbjct: 78 LIFAQEEEQLRVLSHLVEGSYVRVVGPVRSAEGKRQLKAFKVFPVTDLNELTLHLAEVVH 137
Query: 160 VQLYNTRLRGGSS-----NQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPE 214
N LR G + ++P T++N + ++ + ++ + ++V + +R
Sbjct: 138 A---NMALRVGFTPSSVKHEPMDTSTN---SFLGAAAGNLGLNQQQ---KLVYEVIRE-- 186
Query: 215 FLANNNGVHRNVISQQL-NLPMDKLMEALESL-NENSLVYSIDEFHYKSAVNA 265
N G+ + I +L ++ + + + +E L NE + ++D+ HYK+ +A
Sbjct: 187 -CTTNIGIGFDEICSRLKSMNKNTIRDVVEFLANEGHIFTTMDDEHYKATDSA 238
>gi|256085911|ref|XP_002579153.1| replication protein A [Schistosoma mansoni]
gi|360044161|emb|CCD81708.1| putative replication protein A [Schistosoma mansoni]
Length = 264
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADV 67
G + GGG+M S T S+ T++P T ++ + + + S G +
Sbjct: 12 GTTSDFGGGYMASMGATTGQKKISYQG-----TIVPCTCAEIMAANQDGDKFVSPCGIEF 66
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM----YVRV 123
+ I+VVGI+ + + + + IDD TG + E + S+ YVRV
Sbjct: 67 SQISVVGIIRSVNESSTRVEYEIDDYTGPCLPVKLFTEDQDNTSSGPQSRPFRELSYVRV 126
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQM-TNSNH 182
+GH++ FQ + + A+ + + D NE+T+H +E IY ++ T+++ +N + +N +
Sbjct: 127 HGHVRNFQGVKHVIAFRVIHLSDMNELTTHIMEVIYTRMLYTKIKQDENNGTNVKSNFSE 186
Query: 183 LKEYNAISSNHYSFDEGKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLME 240
+NA S G ++ Q +L +R G+ + ++++L +P ++ E
Sbjct: 187 GGSHNAPG----SISNGLTVLQNQILAIVRT---FVGERGIPVSQLTEKLRGIPERQIRE 239
Query: 241 ALESLNENSLVYS-IDEFHYKSA 262
L+ L+ VYS +D+ H+++
Sbjct: 240 DLDFLSAEGHVYSTVDDDHFRAT 262
>gi|302692984|ref|XP_003036171.1| hypothetical protein SCHCODRAFT_106001 [Schizophyllum commune H4-8]
gi|300109867|gb|EFJ01269.1| hypothetical protein SCHCODRAFT_106001, partial [Schizophyllum
commune H4-8]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSS-NDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
S S K+ ++ T+ QL+ + + ++ ++ G ++ +T+VG V ++D+ +
Sbjct: 33 SPSAQKSEASHSIRACTIGQLTRATQVHTDAPFTVGGFELGHVTIVGHVKSLRDQATNTV 92
Query: 88 FLIDDGTGRIECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+I+DG+G +E WA Q + + +G RV G LK F K+ +NA +RP ++
Sbjct: 93 IIINDGSGELEARLWADAGQSPSDSYGGVHEGGIARVTGSLKVFGAKKYINAACVRP-VE 151
Query: 147 FNEITSHFVECIYVQLYNTRLRGGSSNQPQM------------TNSNHLKEYNAISSNHY 194
NE H E +Y + RL G+ + T+ Y A SS
Sbjct: 152 HNERVFHHFEVMYSTI---RLERGAPPGTKAAEHAPAGAFASSTSGGGASAYLAPSSKPV 208
Query: 195 SFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDK-LMEALESLNENSLVYS 253
KS+ + + D++R+ + +GV I+Q L+ K + EAL+ L + VY+
Sbjct: 209 GSGGKKSLKEEITDYMRQHK---TEDGVSVKDIAQALSSSNAKQISEALDQLLDEGNVYT 265
Query: 254 IDE 256
+
Sbjct: 266 TTD 268
>gi|148231915|ref|NP_001090609.1| uncharacterized protein LOC100036853 [Xenopus laevis]
gi|120538242|gb|AAI29536.1| LOC100036853 protein [Xenopus laevis]
Length = 274
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 18/249 (7%)
Query: 26 PDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P P+ K+R+ + ++P TV QL + NDE I +++ + +VGIV +
Sbjct: 29 PAPTQGEKKSRSRSQQIVPCTVSQLLSATQNDEV-FRIGETELSQVIIVGIVRHAEKAPT 87
Query: 85 QFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
++ +DD T ++ +W E + G YV+V GHL++FQ+K+S+ A+ + P
Sbjct: 88 NILYKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRSFQNKKSVVAFKIAP 147
Query: 144 IIDFNEITSHFVECIYVQLY----NTRLRGGSS---NQPQMTNSNHLKEYNAISSNHYSF 196
+ D NE SH +E ++ + GGS+ N P A S + +
Sbjct: 148 VDDMNEFVSHMLEVVHSHMVMNSQGAPSGGGSTMALNTPGRMGIG--DSGGAFSGGNDNP 205
Query: 197 DEGKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEALESLNENSLVYS- 253
G + Q +L+ ++ N G+ + +L+ + ++ + + ++ L+ +YS
Sbjct: 206 TNGLTPHQNQILNLIKS---CKGNEGMAFEELKNRLHGMNVNSIRKTVDFLSNEGHIYST 262
Query: 254 IDEFHYKSA 262
ID+ HYKS
Sbjct: 263 IDDEHYKST 271
>gi|63102328|gb|AAH95005.1| Rpa2 protein [Danio rerio]
gi|197247165|gb|AAI64047.1| Rpa2 protein [Danio rerio]
Length = 271
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 31/275 (11%)
Query: 8 GAAAFAG-----GGFMPSQATTVPDPSSSFSKNRNVRT----LLPMTVKQLSELSS-NDE 57
G A+ AG GGF P++S ++ RT ++P TV QL LS+ E
Sbjct: 8 GEASMAGYTQSPGGF--------GSPAASQGGDKKGRTRAQQIVPCTVSQL--LSAVQAE 57
Query: 58 SSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQIS 116
+ ++ +T+VG++ + +DD T ++ +W + + + I
Sbjct: 58 DVFKVGEVEIAQVTIVGVIRSTDKSTINIQYKVDDMTAAPMDVKQWIDTEDMGVDNSVIP 117
Query: 117 KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQ 176
G YV+V G+L++FQ+ RSL A+S+R + D NE+TSH +E + L ++ +
Sbjct: 118 PGSYVKVSGNLRSFQNNRSLVAFSVRVLEDMNEVTSHMLEVVNAHLQQSKPQNMGGGGGM 177
Query: 177 M----TNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQL 231
M T+ N + S + G S +Q VL ++ + G+ + + Q+L
Sbjct: 178 MPVSHTSMNSMGTTGGYSGANMMLVNGLSANQNQVLSLIKSCQ---EPQGISMHELKQKL 234
Query: 232 N-LPMDKLMEALESL-NENSLVYSIDEFHYKSAVN 264
N + + + + ++ L NE + +IDE H++S N
Sbjct: 235 NSMSANVIRQTVDFLSNEGHIFSTIDEDHFRSTDN 269
>gi|119191694|ref|XP_001246453.1| hypothetical protein CIMG_00224 [Coccidioides immitis RS]
gi|392864318|gb|EAS34853.2| hypothetical protein CIMG_00224 [Coccidioides immitis RS]
Length = 296
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 25/254 (9%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
+S K N +L P+T+KQL++ + + ++ ID +V ++ VG + ++
Sbjct: 35 ASQSGKTYNKSSLRPVTIKQLNDATQAYSDADFKIDDTEVAQVSFVGQIRNISQLSTFMT 94
Query: 88 FLIDDGTGRIECSRW-----AHE--QMEFNEVNQISKGM-------YVRVYGHLKAFQ-D 132
+ +DDGTG IE +W HE M+ ++ G Y +V+G L +F +
Sbjct: 95 YKLDDGTGEIEVKKWLDNEERHEGDAMDTSDPTTGRTGKKELVVNGYAKVWGKLGSFSNN 154
Query: 133 KRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSN 192
+RS+ A+ +R + + +E HF+E + LY S + + + A+ S+
Sbjct: 155 RRSVTAHVIRTLTNMDEYHCHFLEATAIHLYFKHGPPPSKDAADASKAQTSGSGGAMRSD 214
Query: 193 HYSFDEGKSIDQMVLDFLRRPEFLANNN------GVHRNVISQQLNLPMDKLMEALESLN 246
+ +++ M + R F NN G+H ++ + P+D + +A LN
Sbjct: 215 NSMAAGERTLPPMSP--MARKLFNTLNNTPQSREGLHLQHLASLMQAPVDNVEKAARELN 272
Query: 247 ENSLVY-SIDEFHY 259
+ SL+Y ++D++ +
Sbjct: 273 DLSLIYPTVDDYTW 286
>gi|154286486|ref|XP_001544038.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407679|gb|EDN03220.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 247
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCD 78
SQA + + KN +L P+T+KQ L ++ ++ IDG +V+ +T VG V
Sbjct: 12 SQAVKEVAKEAGYMKN----SLRPVTIKQTLDATQAHGDADFKIDGTEVSQVTFVGQVRA 67
Query: 79 MQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM-----------------YV 121
+ + +DDGTG IE W +E N VN M Y
Sbjct: 68 VSHLTTFVTYKLDDGTGEIEVKLW----LEKNAVNPTGDDMDTGDAPRSSESEIPINGYA 123
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR--LRGGSSNQPQMTN 179
+V+G L F ++R+ A+ +RPI + +E HF+E + LY TR + G N+ +
Sbjct: 124 KVWGKLNNFNNRRNFVAHVIRPITNIDEYNCHFLEATAIHLYYTRGPVGGHLGNERPLPG 183
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPM 235
+ H ++ GK++ M + E L+N N G+H ++ + LP+
Sbjct: 184 ATHPSGGGPLA--------GKTLPPMSPLARKMYETLSNTPQSNEGLHVQHLASLMGLPV 235
Query: 236 DK 237
+
Sbjct: 236 GR 237
>gi|383847493|ref|XP_003699387.1| PREDICTED: replication protein A 32 kDa subunit-like [Megachile
rotundata]
Length = 252
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
M+S D +A F GG + +T D ++ K R +T +P+ ++ L LS+
Sbjct: 1 MWSSNLDSSATFEGGF---ANNSTREDQDAT--KTRRAQTTVPVMIRHL--LSTGSTEDV 53
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
+I G V ++V IV ++++ + + I+D TG I +W + + +S Y
Sbjct: 54 TIWGIPVRMFSLVAIVRNVEETATKISYNIEDETGTIVALKWLEADRKTTD-RTMSVNTY 112
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
+R+ G L+ DKR + + P+ NE+T+H +E YV L
Sbjct: 113 IRLVGLLREQNDKRHVLILRMWPLQSLNELTNHILEVTYVAL 154
>gi|321464445|gb|EFX75453.1| hypothetical protein DAPPUDRAFT_226387 [Daphnia pulex]
Length = 275
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 31/274 (11%)
Query: 8 GAAAFAGGGF-MPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGAD 66
G AGG F + TV P + ++P+ +K + L DE I+ +
Sbjct: 10 GNGTMAGGFFNAGTPGGTVNTPGEKKGGAQRAHNIIPVNIKDI--LDEVDEK-LKIEDTE 66
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGH 126
+ +T VG V ++ K+ + + D TG IE +W + Q+ +G + RV G
Sbjct: 67 AHMVTFVGTVEQIESKQTNVSYTVRDDTGSIEVVQWIEGEGNVQSPFQVVEGNFCRVVGS 126
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL----------------YNTRLRGG 170
++ QD+R + A+ + + NEIT+H +E +V++ N + GG
Sbjct: 127 IRQTQDRRHVMAFRVAKLTTANEITTHLLETQWVRMKLRQMKRKMGEGTGQSMNNSVMGG 186
Query: 171 SSNQPQMTNSNHLKEY-NAISSNHYSFDEGKSIDQMVLDFLR--RPEFLANNNGVHRNVI 227
P ++S+ N I S SF MV ++ E + ++ +V
Sbjct: 187 GMTGPLASSSSATSNVANGIMSGLSSFQS------MVYTIIQATTAETGMEKSQIYNSVR 240
Query: 228 SQQLNLPMDKLMEALESLNENSLVYSIDEFHYKS 261
+ + +D +E L +E + ++DE H+KS
Sbjct: 241 GRMIPRDVDAALEFL--CSEGHIYSTVDEDHFKS 272
>gi|413939582|gb|AFW74133.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 140
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 111 EVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+V+ +S+ GMY+ V G LK Q+++ A+S+RPI DFNE+T HF++C+ + + NT L+
Sbjct: 24 DVHWLSRNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKA 83
Query: 170 GS 171
GS
Sbjct: 84 GS 85
>gi|50294217|ref|XP_449520.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528834|emb|CAG62496.1| unnamed protein product [Candida glabrata]
Length = 279
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 47/281 (16%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGA---- 65
++ GGGF S + P+ S N TL P+T+KQ+ D A DG
Sbjct: 11 SSVTGGGFENSDSR--PNTMDS-GTGSNTNTLTPVTIKQIL-----DSQQAIQDGPFITH 62
Query: 66 --DVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQME----------FNEV- 112
+++ + VG+V ++ D ++DGTG+IE +W+ + + F E+
Sbjct: 63 NQELHHVCFVGVVRNITDHTSNIYLTLEDGTGQIEVRKWSDDSSDVAQGTDGDDGFGEMK 122
Query: 113 ---NQISK----GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQ-LYN 164
+QI++ G YV+V+G LK F K+++ ++ + FN++ +H +E I + N
Sbjct: 123 GGESQIAQQYQIGTYVKVFGALKEFGGKKNIQYAVIKNVDSFNDVIAHHLEAIKCHAIAN 182
Query: 165 TRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEG---KSIDQMVLDFLRRPEFL--ANN 219
+++G S + N A S DEG K+ Q +L+F ++ AN
Sbjct: 183 GKMQGSS----LASGDNE----GAGQSLFVQDDEGAGNKNPLQRILEFCKQQCVGKDANT 234
Query: 220 NGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
V +ISQ L++ + +L E +Y ++D+ H+
Sbjct: 235 FAVPIPLISQSLDIDETTVRNCCTTLTEQGFIYPTLDDNHF 275
>gi|260940074|ref|XP_002614337.1| hypothetical protein CLUG_05823 [Clavispora lusitaniae ATCC 42720]
gi|238852231|gb|EEQ41695.1| hypothetical protein CLUG_05823 [Clavispora lusitaniae ATCC 42720]
Length = 294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 39/239 (16%)
Query: 40 TLLPMTVKQLSELSSNDESSASIDG------ADVNTITVVGIVCDMQDKEPQFIFLIDDG 93
TL P+T+KQ+ ND + DG +N ++ VG+V +++ I+DG
Sbjct: 77 TLSPVTIKQI-----NDATQPVSDGEFVVNNVSLNMVSFVGVVRKVENTTSAHTITIEDG 131
Query: 94 TGRIECSRWAHEQMEF--NEVNQIS--KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
TG ++ RW E++ E + S + YV V G LK F K+++ ++R I D NE
Sbjct: 132 TGSVDVRRWVDEKVTTAAQETERFSALENKYVYVTGALKEFNQKKNVQHATIREITDHNE 191
Query: 150 ITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDF 209
+ H + I L +G +P+ N F +G S LD
Sbjct: 192 VLYHMLYAISNHL---EAQGLMKTEPKAENG--------------LFVQGTSAAGSGLDV 234
Query: 210 LRRPEFLANNN------GVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKS 261
L + L N GV IS L L +D++ E L+E + +Y DE Y S
Sbjct: 235 LDKIMALIAANTPSMPEGVPTTWISDNLGLSVDEVKEKCHQLSEMAKIYQGYDEASYLS 293
>gi|189189806|ref|XP_001931242.1| single-stranded DNA binding protein Ssb2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972848|gb|EDU40347.1| single-stranded DNA binding protein Ssb2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 189
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 90 IDDGTGRIECSRW----AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPII 145
+DDGTG IE W + EQ + ++ +G Y R +G LK F D+RS+ A +RPI
Sbjct: 8 LDDGTGSIEVKVWVDSDSSEQPNPTKA-KLVEGAYCRAWGKLKIFNDRRSVGATVIRPIE 66
Query: 146 DFNEITSHFVECIYVQLYNTR-LRGGSSNQPQMTNSNHLKEYNAISSNHY-SFDEGK--S 201
D NE++ H +E V L+ TR GG+ N ++ + Y +D K
Sbjct: 67 DMNEVSFHLLEATAVHLHFTRGPPGGARTAGANANGAAGQQQQKAAGGEYGGYDLSKYGP 126
Query: 202 IDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS 253
+ + V +LR E +N G++++ I+ +L + + + + L L+Y+
Sbjct: 127 VAKKVFQYLR--EAPQSNEGLNQHEIAAKLGIDTADVAKGSDELLSAGLIYT 176
>gi|160285780|pdb|2PQA|A Chain A, Crystal Structure Of Full-Length Human Rpa 1432
HETERODIMER
gi|160285782|pdb|2PQA|C Chain C, Crystal Structure Of Full-Length Human Rpa 1432
HETERODIMER
Length = 131
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE I +++ +T+VGI+ + ++ IDD T ++
Sbjct: 5 IVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 63
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I
Sbjct: 64 RQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVI 122
>gi|440493484|gb|ELQ75949.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Trachipleistophora hominis]
Length = 226
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 16 GFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGI 75
GF+PS P P + +++RTL ++KQL L + D + +ID ++TI V G
Sbjct: 8 GFIPSS----PKPDYT---PKSLRTL---SIKQLKSLPT-DTPTHTIDNTTLSTICVAGW 56
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRS 135
V + + IFL+DDGT I S W + E + I ++RV G+++ + S
Sbjct: 57 VRSTRQAQSGTIFLLDDGTAMINASFWPNGLFEEEQAGLIEPSNFLRVIGNVRVYDGDIS 116
Query: 136 LNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
++ L I DFN ++ HF+ + LY R
Sbjct: 117 VSVSFLTKIDDFNYVSYHFLNVLQQHLYCRR 147
>gi|366992077|ref|XP_003675804.1| hypothetical protein NCAS_0C04500 [Naumovozyma castellii CBS 4309]
gi|342301669|emb|CCC69440.1| hypothetical protein NCAS_0C04500 [Naumovozyma castellii CBS 4309]
Length = 279
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID-GADVN 68
++ GGGF S D + ++ TL P+T+KQ+ E + + + +++
Sbjct: 11 SSVTGGGFDNSDRPNSGDADGAVNR---TNTLHPVTIKQILESTQEIQDGPFVSHNQELH 67
Query: 69 TITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-------------QI 115
+ VG+V ++ D I+DGTG+IE +W+ + + N Q
Sbjct: 68 HVCFVGVVRNITDHTSNIYLTIEDGTGQIEVRKWSDDATDMAAGNNEEDKQGSSQAAQQY 127
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI-YVQLYNTRLRGGSSNQ 174
G YV+++G LK F K+++ ++ + FNE+ +H +E I + + N ++ S+
Sbjct: 128 QMGTYVKIFGALKEFGGKKNIQYAVIKNVESFNEVLAHHLEVIKWHAIANGKIPNPSTGS 187
Query: 175 PQMTNSNHLKEYNAISSNHYSFDEGK-SIDQMVLDFLRR--PEFLANNNGVHRNVISQQL 231
+ + + S + +E SI +L+F ++ AN V +I+Q L
Sbjct: 188 GEPLQQGAMGGNQSGQSLFVTENESNHSISDRILEFCKKQCEGKDANAFAVPIPLIAQSL 247
Query: 232 NLPMDKLMEALESLNENSLVY 252
N+ + +L E +Y
Sbjct: 248 NIDENTARNCCTTLTEQGFIY 268
>gi|5822384|pdb|1QUQ|A Chain A, Complex Of Replication Protein A Subunits Rpa14 And Rpa32
gi|5822386|pdb|1QUQ|C Chain C, Complex Of Replication Protein A Subunits Rpa14 And Rpa32
Length = 129
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE I +++ +T+VGI+ + ++ IDD T ++
Sbjct: 4 IVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 62
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I
Sbjct: 63 RQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVI 121
>gi|21465963|pdb|1L1O|B Chain B, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
gi|21465966|pdb|1L1O|E Chain E, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 128
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE I +++ +T+VGI+ + ++ IDD T ++
Sbjct: 3 IVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 61
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I
Sbjct: 62 RQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVI 120
>gi|350409918|ref|XP_003488887.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
impatiens]
Length = 233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKN-RNVRTLLPMTVKQLSELSSNDESS 59
M+S D A GGF+ D S K + ++ ++P+ ++QL++L+ N E S
Sbjct: 1 MWSN-LDSTIVSASGGFLNDSQ----DQSDGNKKTGKRIKKIIPVMIQQLTQLNDNLEGS 55
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM 119
IT+VGI+ ++ + + I+D TG I C +W + +N
Sbjct: 56 I---------ITLVGIIHHIEKSSTKVTYEIEDETGHITCFQWLAVGKSESIINL---NT 103
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQ 176
YVRV+G+++ + + + + P+ NE+T+H +E YV L +++ S+N+ +
Sbjct: 104 YVRVFGYIREQTEIKHILILKIWPLTTLNELTNHLLEVTYVTL---KIQKTSNNEDK 157
>gi|443734421|gb|ELU18419.1| hypothetical protein CAPTEDRAFT_104212, partial [Capitella teleta]
Length = 217
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P+TV Q+ N ++ D +++ ++++GIV + + + + IDD T R +E
Sbjct: 7 VIPVTVAQVLAAQQNGDNLIW-DEIELHQVSILGIVRSVNENPTRLEYFIDDLTARPLEV 65
Query: 100 SRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
++ A E ++ + + YV+V+G ++ FQ KRS+NA+ + + D N IT+H +E
Sbjct: 66 RQFVDADENAPEDKTDIARENQYVQVFGTIRDFQGKRSINAFKILQVADANTITTHLLEV 125
Query: 158 IYVQLY--NTRLRGGSSNQPQMTN----SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR 211
I+ L ++ G N M + +N + +N I + S D+G S+ + D LR
Sbjct: 126 IHAHLALKKAKIAGQYINNINMCSLFGYANSQRVHNVIRA--CSEDQGMSV-HTITDNLR 182
Query: 212 RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
+P + +A+E L+ +YS +D+ HY+S
Sbjct: 183 --------------------GIPQKAIRDAIEFLSAEGHIYSTVDDEHYRS 213
>gi|126328769|ref|XP_001364781.1| PREDICTED: replication protein A 32 kDa subunit-like [Monodelphis
domestica]
gi|126328771|ref|XP_001364851.1| PREDICTED: replication protein A 32 kDa subunit-like [Monodelphis
domestica]
Length = 275
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 1 MYSGEFDG----AAAFAGGGFMPSQATTVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSN 55
M++ FDG ++ +GG P P S + K+R + ++P T+ QL +
Sbjct: 1 MWNSGFDGNYGSSSYSSGGYTQPPGGFGTPTASQAEKKSRARAQHIVPCTISQLLSATLV 60
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQ 114
DE I +++ +T+VGI+ + ++ IDD T ++ +W +E
Sbjct: 61 DEV-FKIGEIEISQVTIVGIIRQAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTV 119
Query: 115 ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+ YV+V GHL++FQ+K+SL A+ + P+ D NE T H +E +
Sbjct: 120 VPPETYVKVAGHLRSFQNKKSLVAFKILPLEDMNEFTIHILETV 163
>gi|164659159|ref|XP_001730704.1| hypothetical protein MGL_2158 [Malassezia globosa CBS 7966]
gi|159104601|gb|EDP43490.1| hypothetical protein MGL_2158 [Malassezia globosa CBS 7966]
Length = 280
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 41 LLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
L P+TV+Q L+ + +S DGA+++ +T+V + + +DDGTG+++
Sbjct: 46 LRPVTVRQVLNATQPDSDSPFEFDGAELSQVTLVAWIRQTNRNATNIQYTLDDGTGQLDV 105
Query: 100 SRWAHEQM-EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W + E + ++ + +VRV G +K+F +KR++ A ++ + D NE H ++ I
Sbjct: 106 RQWIDNALDEGAKADEFAPNQFVRVLGEIKSFNNKRNITAATVNKLEDHNEYLYHQLDVI 165
Query: 159 YVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDF 209
Y L + G S + ++++ + I ++ Y ++ D M D
Sbjct: 166 YTHLQLIKAEGMRSTKTDVSST------HGIDASVYDDSAMQTADSMAADL 210
>gi|270047786|pdb|3KDF|D Chain D, X-Ray Crystal Structure Of The Human Replication Protein A
C From Wheat Germ Cell Free Expression
gi|270047788|pdb|3KDF|B Chain B, X-Ray Crystal Structure Of The Human Replication Protein A
C From Wheat Germ Cell Free Expression
Length = 132
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE I +++ +T+VGI+ + ++ IDD T +
Sbjct: 6 IVPCTISQLLSATLVDEV-FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDXTAAPXDV 64
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I
Sbjct: 65 RQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIXPLEDXNEFTTHILEVI 123
>gi|393244248|gb|EJD51760.1| nucleic acid-binding protein, partial [Auricularia delicata
TFB-10046 SS5]
Length = 226
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 43 PMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSR 101
P+T++ L S + IDG + ++T+VG V ++ + + ++D TG++E
Sbjct: 4 PVTIRMLMGAESTLPDWGFKIDGLMLESVTIVGKVLQVEKTDTGRRYSLEDSTGQMETRC 63
Query: 102 WAHEQ-MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV 160
W Q + ++ +YVRV G LK FQ KR L+A ++R + D +EI +H ++ I
Sbjct: 64 WIDSQAASIAQDEEVVDNVYVRVIGTLKEFQGKRLLHATTVRRVTDDHEIFAHTLDVIAT 123
Query: 161 QLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLR-RPEFLANN 219
+ N++ R ++ + S + +++ +H + + + FLR P
Sbjct: 124 YVLNSKGRAAGASADHTSASMATQAASSVQYSHLPLTQ-----RAICVFLRNHPGHTMGG 178
Query: 220 NGVHRNV--ISQQLNLPMDKLMEALESLNENSLVY 252
+ V I + + EAL+ L + LVY
Sbjct: 179 ADIKTIVHGIKHVTDATPTLISEALDELMDEGLVY 213
>gi|225707618|gb|ACO09655.1| Replication protein A 32 kDa subunit [Osmerus mordax]
Length = 276
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 13/246 (5%)
Query: 28 PSSSFSKNRNVRT----LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKE 83
P++S + RT ++P TV QL ++ E I +V +T VGI+
Sbjct: 27 PAASQGGEKKGRTRAQQIVPCTVSQLMS-AAQAEDVFRIGDVEVAQVTFVGIIRSTDKSM 85
Query: 84 PQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
+ +DD TG ++ +W + + I YV+V G+L++FQ+ RS+ A+++R
Sbjct: 86 TNIQYKVDDMTGAPMDVKQWVDTEDPGVDSTVIPPNTYVKVSGNLRSFQNHRSVVAFNVR 145
Query: 143 PIIDFNEITSHFVECIYVQLY-----NTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFD 197
P+ D NEITSH +E + + +T GG N + S + S
Sbjct: 146 PLEDMNEITSHMLEVVQAHMMLGKPQSTMGGGGGMNTSMIPISKPGMGGVGGGYSGASDM 205
Query: 198 EGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALESL-NENSLVYSID 255
+ LR + G+ + Q+L + + + +A+E L NE + +ID
Sbjct: 206 SANGLSPSQNQVLRLIRSCQDAQGISIQDLKQRLGGISLAVIKQAVEFLSNEGHIFSTID 265
Query: 256 EFHYKS 261
E H+KS
Sbjct: 266 EDHFKS 271
>gi|313666984|gb|ADR72942.1| replication protein A2 [Brachionus ibericus]
Length = 260
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 18/237 (7%)
Query: 38 VRTLLPMTVKQLSELSSNDESSASI---DGADVNTITVVGIVCDMQDKEPQFIFLIDDGT 94
++ ++P+T + ++ L S E +SI + N + +VG++ + + +LIDD T
Sbjct: 27 IKYIVPVTGQTIN-LCSQVEGESSIFEYNHLRFNQMYIVGLIRSVIKRANDITYLIDDMT 85
Query: 95 G---RIECSRWAHEQMEFNEV----NQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
++ ++ ME +E +Q + YV+V+G +K+ Q+++ + A+ + P+ +
Sbjct: 86 TNEIHVKLQTDDNDDMETDEPKAQHSQFIENQYVKVFGIIKSLQNQKVVQAFRILPLKEL 145
Query: 148 NEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVL 207
NEI+ H ++C+ +Y +G + QM SN + +A N S G S + +
Sbjct: 146 NEISHHILDCMNASIYYIT-KGNDNFDMQM--SNPMSGVSAYGDNGGSSTSGLSGLHLNI 202
Query: 208 DFLRRPEFLANNNGVH-RNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
L + N+ GVH R + S N P +K+ EALE L+ VYS ID+ H+KS
Sbjct: 203 SNLIKQA--RNSEGVHIREICSHFNNYPENKIREALEFLSTEGHVYSTIDDEHFKST 257
>gi|301780752|ref|XP_002925793.1| PREDICTED: replication protein A 30 kDa subunit-like [Ailuropoda
melanoleuca]
gi|281340349|gb|EFB15933.1| hypothetical protein PANDA_015347 [Ailuropoda melanoleuca]
Length = 263
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 16/262 (6%)
Query: 8 GAAAFAGGGF----MPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID 63
G+ + GG P Q P + S+ R ++ ++P V QL S+ ++ I
Sbjct: 10 GSVSAVGGAIGSNDQPFQGGAAPATKAPRSRVR-IQDIIPCCVNQLLT-STLVDNVFKIR 67
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVR 122
G V+ +VVGI+ + ++ IDD T + E +W ++ + G+YV+
Sbjct: 68 GIQVSQASVVGIIRKAERASNYILYRIDDMTTKPFEVRQWLGRNKAKQGMSLLPVGVYVK 127
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
V G LK F++ + L ++R + D NE T+H +E + + + +S +
Sbjct: 128 VIGILKCFKEVKGLKVLNIRVLEDMNEFTTHILETVNAHMMLDKAHQVASGPSAPVVPSK 187
Query: 183 LKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN-LPMDKLMEA 241
+ E + E +D + + LR G + + QL+ L + +A
Sbjct: 188 IDEVQ-------KYGEYYHLDFIHKEVLRLIHECPQQEGKSVHELQTQLHSLSERAIKQA 240
Query: 242 LESLNENSLVYS-IDEFHYKSA 262
LE L +YS +DE H+KSA
Sbjct: 241 LEYLTVEGYIYSTVDEEHFKSA 262
>gi|403175388|ref|XP_003889007.1| hypothetical protein PGTG_22244 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171580|gb|EHS64408.1| hypothetical protein PGTG_22244 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 169
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 41 LLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
L P+T+KQ L +SN +S+ SI DV ++ G+V D+ + ++DGTG IE
Sbjct: 42 LRPVTIKQVLDAEASNTDSAISIQDIDVTNVSFCGVVRDIVRNATNVLLQVEDGTGGIEV 101
Query: 100 SRWAH----EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFV 155
+W E F I +VRV G K F +K+++ + I DFNEI +
Sbjct: 102 RKWIDSSDGESEGFEAETGIQIRDWVRVIGSPKLFNNKKNVAGLRIEKITDFNEINYRLL 161
Query: 156 ECIYVQL 162
+ + V L
Sbjct: 162 DAVRVTL 168
>gi|383847491|ref|XP_003699386.1| PREDICTED: replication protein A 32 kDa subunit-like [Megachile
rotundata]
Length = 244
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 13 AGGGFMPSQATTVPDPSSSFSKN-RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTIT 71
A GGF+ D + S +N + V ++P+ +K +++ S+ND + G V+ IT
Sbjct: 13 ASGGFLN-------DSNISRRENSKRVENVIPIMIKHITQ-SNND---LQLWGMTVHMIT 61
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQ 131
V IV ++ + + + +D TG I RW E+M + + I+ YVRVYGH+K
Sbjct: 62 FVAIVRNIGNTSTKMTYEFEDETGTISGFRWL-ERMNRPDTS-INLNSYVRVYGHIKEQN 119
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
+ + + A + P+ NE+T+H +E YV L
Sbjct: 120 ETKYVLALKILPLTKLNELTTHLLEVSYVTL 150
>gi|68482450|ref|XP_714857.1| hypothetical protein CaO19.2267 [Candida albicans SC5314]
gi|68482573|ref|XP_714795.1| hypothetical protein CaO19.9807 [Candida albicans SC5314]
gi|46436389|gb|EAK95752.1| hypothetical protein CaO19.9807 [Candida albicans SC5314]
gi|46436454|gb|EAK95816.1| hypothetical protein CaO19.2267 [Candida albicans SC5314]
gi|238883606|gb|EEQ47244.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 272
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVR-TLLPMTVKQLSELSSNDESSASIDG------ADV 67
GGF A SS VR +L P+T+KQ+ ND + DG ++
Sbjct: 20 GGFNTEHA-----GSSQRQTTTQVRQSLTPVTIKQI-----NDATQPVPDGEFKVNNVEL 69
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM-----EFNEVNQISKGMYVR 122
N I+ VG+V ++++ I+DGTG I+ +W E + +F + N++ KG YV
Sbjct: 70 NMISFVGVVRNVENTNASIAVTIEDGTGSIDVRKWVDETISSAEEDFEKYNEM-KGKYVY 128
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
V G LK F +++++ S+ I D N+I H + I
Sbjct: 129 VGGSLKQFNNRKTVQNASISLITDSNQIVYHHLSAI 164
>gi|380013149|ref|XP_003690630.1| PREDICTED: replication protein A 32 kDa subunit-like [Apis florea]
Length = 247
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+ V+TL+P+T+K L +SS ++ + G T VG++ ++++ + + I+D TG
Sbjct: 30 QRVQTLIPVTIKLLHSISSIED--PTFWGIKARMFTFVGLIRNVEETATKISYDIEDDTG 87
Query: 96 RIECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
I +W + E + V +++ YVR+ G L+ DKR + L P+ + NE+T+H
Sbjct: 88 TITALKWLEANKQETDRVAEVN--TYVRIVGMLREQNDKRHILILRLLPLQNLNELTNHI 145
Query: 155 VECIYVQL 162
+E IY L
Sbjct: 146 LEVIYASL 153
>gi|440909265|gb|ELR59190.1| Replication protein A 32 kDa subunit [Bos grunniens mutus]
Length = 270
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IEC 99
++P T+ QL + DE SI +++ +T+VGI+ + + ++ IDD T ++
Sbjct: 46 IVPCTISQLLSATLVDEV-FSIGNVEISQVTIVGIIRNAEKATTNIVYKIDDMTAAPMDV 104
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+W +E + YV+V G+L++FQ+ +SL A+ + P+ D NE T+H +E +
Sbjct: 105 RQWVDTDDANSENTVVPPETYVKVAGNLRSFQNNKSLVAFKIMPLEDMNEFTTHILEVV 163
>gi|18859321|ref|NP_571786.1| replication protein A 32 kDa subunit [Danio rerio]
gi|11496148|gb|AAG12435.1| replication protein A [Danio rerio]
Length = 272
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 8 GAAAFAG-----GGFMPSQATTVPDPSSSFSKNRNVRT----LLPMTVKQLSELSS-NDE 57
G A+ AG GGF P++S ++ RT ++P TV QL LS+ E
Sbjct: 8 GEASMAGYTQSPGGF--------GSPAASQGGDKKGRTRAQQIVPCTVSQL--LSAVQAE 57
Query: 58 SSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQIS 116
+ ++ +T+VG++ + +DD T ++ +W + + + I
Sbjct: 58 DVFKVGEVEIAQVTIVGVIRSTDKSTINIQYKVDDMTAAPMDVKQWIDTEDMGVDNSVIP 117
Query: 117 KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
G YV+V G+L++FQ+ RSL A+S+R + D NE+TSH +E + L ++
Sbjct: 118 PGSYVKVSGNLRSFQNNRSLVAFSVRVLEDMNEVTSHMLEVVNAHLQQSK 167
>gi|429964366|gb|ELA46364.1| hypothetical protein VCUG_02128 [Vavraia culicis 'floridensis']
Length = 284
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 16 GFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGI 75
GF+PS P P + +++RTL ++KQL L + D + +ID + ++TI V G
Sbjct: 66 GFIPSS----PKPDYT---PKSLRTL---SIKQLKSLPT-DTPTHTIDNSTLSTICVAGW 114
Query: 76 VCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRS 135
V + + IF++DDGT I S W + E + I ++RV G+++ + S
Sbjct: 115 VRSTRQAQSGTIFVLDDGTAMINASFWPNGMFEEEQAGLIEPNNFLRVIGNVRVYDGDIS 174
Query: 136 LNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
++ L I DFN ++ HF+ + L+ R
Sbjct: 175 VSVSFLTKIDDFNYVSYHFLNVLQQHLHCRR 205
>gi|302310678|ref|XP_002999398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199428225|emb|CAR56736.1| KLLA0E07371p [Kluyveromyces lactis]
Length = 227
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ------- 114
I G +++ ++ VG++ ++ D ++DGTG+IE +W ++ + + +Q
Sbjct: 15 IMGQELHHVSFVGVIRNVADNTSNVTLTVEDGTGQIEFRKWTNDSNDMSHASQEDQNGDY 74
Query: 115 -------ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV-QLYNTR 166
S G Y++VY L+ F K ++ ++ I FNEI +H +E I + N
Sbjct: 75 NSQVAQDYSVGKYIKVYASLREFSGKMNVQYAVVKHIDSFNEILAHHLEVIKAFAVANGN 134
Query: 167 LRGGSSNQPQMTNSNHLKEYNA--ISSNHYSFDEGKSIDQMVLDFLRRPEFLANNN--GV 222
L S+ N+ E N+ + N + KS + VLDF+R ++N V
Sbjct: 135 LSVDSTVAVNGANT----ETNSLFVQDN----EPPKSATEKVLDFIRAQCAGKDSNSFSV 186
Query: 223 HRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHY 259
+ISQ LN+ D + ++L E +Y + DEF +
Sbjct: 187 QTKLISQSLNMIEDDVRMYCQTLTEQGYIYPTFDEFTF 224
>gi|56755527|gb|AAW25942.1| SJCHGC02904 protein [Schistosoma japonicum]
Length = 262
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 27/260 (10%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVR-TLLPMTVKQLSELSSNDESSASIDGADVNTITV 72
GGG+M S +S+ K N + T++P T ++ + + + S G + + ITV
Sbjct: 17 GGGYMASAG------ASAGQKKINYQGTIVPCTCAEILAANQDGDKFVSPCGLEFSQITV 70
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ---ISKGMYVRVYGHLKA 129
VGIV + + + + IDD TG ++ E + Q + YVRV+GH++
Sbjct: 71 VGIVRSVNESSTRVEYEIDDYTGPYLPVKFFTEDQDSTSSIQSRPFRELSYVRVHGHVRN 130
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLR----GGSSNQPQMTNSNHLKE 185
FQ + + A+ + + D NE+T+H +E IY ++ +++ G +N+ T S
Sbjct: 131 FQGVKHVIAFRVIYVSDMNELTTHILEVIYARMLYIKMKHDESDGINNKGIFTESASNNA 190
Query: 186 YNAISSNHYSFDEGKSIDQ-MVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEALE 243
+S+ G ++ Q +L +R G+ + ++++L +P ++ E L+
Sbjct: 191 VGTVSN-------GLTVLQNQILAIVRT---FIGERGIPISQLTEKLRGIPERQIREDLD 240
Query: 244 SLNENSLVYS-IDEFHYKSA 262
L+ VYS +D+ H+++
Sbjct: 241 FLSAEGHVYSTVDDDHFRAT 260
>gi|385301665|gb|EIF45839.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 280
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 23/256 (8%)
Query: 13 AGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQL-SELSSNDESSASIDGADVNTIT 71
AG G SQ D S+ + +T+ P+T+K + S + + G + ++
Sbjct: 29 AGNGGFSSQ-----DNSNRQQRQNTTQTITPVTIKMIQSATQPTQDGPYEVYGMPLYYVS 83
Query: 72 VVGIVCDMQ-DKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK-GMYVRVYGHLKA 129
+GI+ ++ ++ ++DGT I +W ++ + + Q K G YVRV ++
Sbjct: 84 FIGIIREIDTSNTSSTMYKLEDGTEAISVRQWNNDGDDAADDQQQFKSGEYVRVSATIRE 143
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAI 189
F K+ L S+RPI DFNEI HF+ V++Y GG + NS + + N
Sbjct: 144 FNSKKQLQTQSIRPITDFNEIPYHFLSA--VKVYVGHKNGGDPSSQGGNNSLFVGDGNQT 201
Query: 190 SSNHYSFDEGKSIDQMVLDFLRRPE----FLANNN-----GVHRNVISQQLNLPMDKLME 240
+ G+ Q L E F+ N+ GV +++Q+ N+ +D++ E
Sbjct: 202 GDSQ----PGRQQQQQNNANLPLTEKLYNFIKENSNSMVEGVPTQLMAQEFNISVDQVNE 257
Query: 241 ALESLNENSLVYSIDE 256
L +L ++ +++ D+
Sbjct: 258 HLGTLVDDGRIFATDD 273
>gi|150866145|ref|XP_001385638.2| hypothetical protein PICST_47651 [Scheffersomyces stipitis CBS
6054]
gi|149387401|gb|ABN67609.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 247
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 39/261 (14%)
Query: 2 YSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSAS 61
Y GEF GGF T + +S S+ R +L P+T+KQ+ ND +
Sbjct: 5 YDGEF-------SGGF------TTENAPNSQSEPRTRTSLTPVTIKQI-----NDATQPI 46
Query: 62 IDG------ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ----MEFNE 111
DG ++N I+ VGIV + I+DGTG +W E E E
Sbjct: 47 PDGNFKVNNVELNMISFVGIVRSVDSLPSAISVTIEDGTGTTNVRKWVDENSGTPAEAEE 106
Query: 112 VNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS 171
++ YV V G LK+ +K + S+ P+ D N++ SH + I+ L L G
Sbjct: 107 KYRMYLDKYVYVTGALKSMSNKSYIQNASVMPVKDHNQVLSHVLSAIHHHL----LAQGI 162
Query: 172 SNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL 231
+P+ S + E + S+ S E I ++V D P + GV +ISQ +
Sbjct: 163 KPRPKDEKSLFVSESASTSAPQLSIKE--RIMKVVRD--HSPSMV---EGVPPRLISQIV 215
Query: 232 NLPMDKLMEALESLNENSLVY 252
+ D++ + L + +Y
Sbjct: 216 GIGQDEVTKICTELVDRGELY 236
>gi|328781494|ref|XP_001121269.2| PREDICTED: replication protein A 32 kDa subunit [Apis mellifera]
Length = 246
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
+ V+TL+P+T+K L +S ++ + G T VG++ ++++ + + I+D TG
Sbjct: 30 QRVQTLIPVTIKLLHSISPIED--PTFWGIKARMFTFVGLIRNVEETATKISYDIEDDTG 87
Query: 96 RIECSRWAHE-QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
I +W + E + V +++ YVR+ G L+ DKR + L P+ + NE+T+H
Sbjct: 88 TITALKWLEANKQETDRVAEVN--TYVRIVGMLREQNDKRHILILRLLPLQNLNELTNHI 145
Query: 155 VECIYVQL 162
+E IY L
Sbjct: 146 LEVIYASL 153
>gi|302406823|ref|XP_003001247.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
gi|261359754|gb|EEY22182.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
Length = 181
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 15/150 (10%)
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR--LRGGSS--NQP 175
YVRV+G +K+F KR + A+ LR + DFNE+ H +E YV L+ T+ L G + N
Sbjct: 19 YVRVWGRIKSFNGKRHVGAHFLRAVTDFNEVNYHLLESTYVHLFFTKGPLGGAKAEDNGD 78
Query: 176 QMTNSNHLKEYNAISSNHYSFDEGKS--------IDQMVLDFLRRPEFLANNNGVHRNVI 227
M N ++N+ S G+S + Q + +FL N GVH NVI
Sbjct: 79 GMFVDGGGHGNNTSNNNNASHATGQSSKVAQCTPMGQKMYNFLVNAP--GGNEGVHMNVI 136
Query: 228 SQQLNLPMDKLMEALESLNENSLVY-SIDE 256
+ + M ++ A + L LVY +ID+
Sbjct: 137 ASGAGMSMRDVLGAADDLLGQGLVYTTIDD 166
>gi|340718537|ref|XP_003397722.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
terrestris]
Length = 233
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 1 MYSGEFDGAAAFAGGGFM-PSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESS 59
M+S D A GGF+ SQ + + + ++ ++P+ ++QL++L+ N E S
Sbjct: 1 MWSN-LDSTIVNASGGFLNDSQHQSDGNKKTG----GRIKKIIPVMIQQLTQLNDNLEGS 55
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM 119
IT+VGI+ ++ + + I+D TG I C +W + +N
Sbjct: 56 I---------ITLVGIIHHIEKSSTKVTYEIEDETGHITCFQWLAVGKSQSIINL---NT 103
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
YVRV+G+++ + + + + P+ NE+T+H +E YV L
Sbjct: 104 YVRVFGYIREQTEIKHILILRIWPLTTLNELTNHLLEVTYVAL 146
>gi|149755174|ref|XP_001491922.1| PREDICTED: replication protein A 30 kDa subunit-like [Equus
caballus]
Length = 263
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID 63
G A +GG PSQ + F ++ ++P +V QL + D+ I
Sbjct: 10 GSISAAGGASGGNDQPSQGGGTAPATKLFRSRALIQEIIPCSVNQLLTSTLVDDV-FQIR 68
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVR 122
G +V+ +++VGI+ + ++ IDD T + IE +W + V + G+YV+
Sbjct: 69 GVEVSQVSIVGIIRQAEMAPNYVLYKIDDMTTKPIEVRQWVSNEKAKQGVTLLPVGVYVK 128
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
V+G LK + L ++R + NE T+H +E
Sbjct: 129 VFGTLKCSAGVKCLEVLNIRVLESMNEFTAHVLE 162
>gi|225680139|gb|EEH18423.1| single-stranded DNA binding protein Ssb2 [Paracoccidioides
brasiliensis Pb03]
Length = 285
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 30/235 (12%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ + S ++ ++ I G DV+ I VG V + + +DDGTG E
Sbjct: 46 SLRPVTIKQTQDASQAHGDADFKISGTDVSQIVFVGQVRAISHLTTFVTYKLDDGTGETE 105
Query: 99 CSRWAHEQMEFNEVNQISKGM-----------------YVRVYGHLKAFQDKRSLNAYSL 141
W +E N VN M Y +V+G L F ++R+ A+ +
Sbjct: 106 VKLW----LEKNAVNPTGDDMETRDAAHPSESEIQVNGYAKVWGKLNNFNNRRNFVAHVI 161
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
RPI + NE HF+E + LY TR G Q + A+ S G+
Sbjct: 162 RPITNMNEYHCHFLEATAIHLYYTRGPPGG----QQGDKPVAGTAPAVGGGGGSTFAGRV 217
Query: 202 IDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ + + E L++ N G+H ++ + L ++ + E L N L++
Sbjct: 218 LPPLSPLARKVYETLSDTPQSNEGLHVQNLAALMGLSAGEVFKGGEELLSNGLIF 272
>gi|241951792|ref|XP_002418618.1| replication factor A protein 2, putative [Candida dubliniensis
CD36]
gi|223641957|emb|CAX43921.1| replication factor A protein 2, putative [Candida dubliniensis
CD36]
Length = 268
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 12 FAGGGFM-PSQA--TTVPDPSSSFSKNRNVR-TLLPMTVKQLSELSSN-DESSASIDGAD 66
+ GGGF SQ TT SS VR +L P+T+KQ+++ + ++ ++ +
Sbjct: 9 YHGGGFNNTSQGGFTTEHAGSSQRQTATQVRQSLTPVTIKQINDATQPVPDAEFKVNNVE 68
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEF--NEVNQIS--KGMYVR 122
+N I+ VG+V +++ I+DGTG I+ +W E + E + S K YV
Sbjct: 69 LNMISFVGVVRKVENMNASISVTIEDGTGSIDVRKWVDEAISTADEECQKYSELKDKYVF 128
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI----YVQLYNTRLRGGSSNQPQMT 178
V G LK F +++++ S+ PI D N+I H + I Q +T GG + +
Sbjct: 129 VGGSLKQFSNRKTVQNASISPITDSNQIVYHHLSAIEHHLKAQGISTTGAGGQTTNATTS 188
Query: 179 NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKL 238
+ L N + +S G DQ V L+ + Q +P+D +
Sbjct: 189 AGSGLFVDNPTT---HSKGTGSMTDQ-VFAVLKESSN------------TMQAGVPVDYI 232
Query: 239 MEALESLNENSLVY 252
+E L E L++
Sbjct: 233 IEKLNITKEECLLH 246
>gi|190344638|gb|EDK36354.2| hypothetical protein PGUG_00452 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 21/252 (8%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRT-LLPMTVKQ-LSELSSNDESSASIDGA 65
G F GGF + K + R+ + P+T+KQ + ++ + I+
Sbjct: 5 GYGNFGDGGFSDTATGGFQADVDGSQKPQQTRSSITPVTIKQVIQAVALGPDLDFRINNV 64
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM--YVRV 123
++N + V+G++ + I+DG+G +E +W E E + S + YV V
Sbjct: 65 ELNMVRVIGVLRKVDTNASAVNLTIEDGSGSMEVRKWTDETASAAEAEKYSSYLNQYVSV 124
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHL 183
G LK F +K+ + ++RPI D N++ H + I L L +P+ N +
Sbjct: 125 SGALKEFNNKKGIQQATIRPISDHNQVIYHHLSAISHHLKAQGLH--VRRKPENENGLFV 182
Query: 184 KEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRNVISQQLNLPMDKLMEA 241
E G S+ + VL + P GV +I+Q++N D +
Sbjct: 183 SENGG----------GDSLQERVLQVINELTPSM---QEGVPLQLIAQKVNATDDSVENE 229
Query: 242 LESLNENSLVYS 253
+ L ++ +YS
Sbjct: 230 CQELVQSGRIYS 241
>gi|328770622|gb|EGF80663.1| hypothetical protein BATDEDRAFT_33168 [Batrachochytrium
dendrobatidis JAM81]
Length = 273
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 34 KNRNVRTLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLI 90
K ++L P+T+KQL + ++S S ID ++ +T+VG + + ++I
Sbjct: 9 KGSGNQSLRPVTIKQLLAATQTQQTSDSPFTIDSQELTQVTLVGRLNSTTLQSTNCTYVI 68
Query: 91 DDGTG-RIECSRWAHEQMEFN-------EVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR 142
DDGTG IEC ++ ++N + +Q + YV+V+G +K+F K++L+ + +R
Sbjct: 69 DDGTGLTIECKKF----FDYNGADDEKVQADQFPEESYVQVFGQIKSFGSKKTLSLFKMR 124
Query: 143 PIIDFNEITSHFVECIYVQLYNTR 166
I +EIT H I L T+
Sbjct: 125 LINSIDEITYHNTMVIMAHLALTK 148
>gi|226291933|gb|EEH47361.1| replication factor-A protein [Paracoccidioides brasiliensis Pb18]
Length = 285
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 30/235 (12%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ + S ++ ++ I G DV+ I VG V + + +DDGTG E
Sbjct: 46 SLRPVTIKQTQDASQAHGDADFKISGTDVSQIVFVGQVRAISHLTTFVTYKLDDGTGETE 105
Query: 99 CSRWAHEQMEFNEVNQISKGM-----------------YVRVYGHLKAFQDKRSLNAYSL 141
W +E N VN M Y +V+G L F ++R+ A+ +
Sbjct: 106 VKLW----LEKNAVNPTGDDMETRDAAHPSESEIQVNGYAKVWGKLNNFNNRRNFVAHVI 161
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
RPI + NE HF+E + LY TR G Q + A+ S G+
Sbjct: 162 RPITNMNEYHCHFLESTAIHLYYTRGPPGG----QQGDKPVAGTAPAVGGGGGSTFAGRV 217
Query: 202 IDQMVLDFLRRPEFLAN----NNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ + + E L++ N G+H ++ + L ++ + E L N L++
Sbjct: 218 LPPLSPLARKVYETLSDTPQSNEGLHVQNLAALMGLSAGEVFKGGEELLSNGLIF 272
>gi|335772536|gb|AEH58099.1| replication protein A 32 kDa subunit-like protein [Equus caballus]
Length = 212
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVY 124
+++ +T+VGI+ + ++ IDD T ++ +W E + YV+V
Sbjct: 12 EISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENAVVPPETYVKVA 71
Query: 125 GHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY----NTRLRGG--SSNQPQMT 178
GHL++FQ+K+ A+ + P+ D NE T+H +E + + N++ G S + P M
Sbjct: 72 GHLRSFQNKKKSVAFKIMPLEDMNEFTTHILEVVNAHMMLNKANSQPPAGRASISNPGMG 131
Query: 179 NSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKL 238
+ + + + +N + + + ++ ++ RPE L +++ +Q ++ + +
Sbjct: 132 EAGNFGGNSLMPANGLTVAQNQVLN--LIKACPRPEGLN-----FQDLKNQLQHMAVASI 184
Query: 239 MEALESLNENSLVYS-IDEFHYKS 261
+A++ L+ +YS +D+ H+KS
Sbjct: 185 KQAVDFLSNEGHIYSTVDDDHFKS 208
>gi|146422268|ref|XP_001487075.1| hypothetical protein PGUG_00452 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 21/251 (8%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRT-LLPMTVKQ-LSELSSNDESSASIDGA 65
G F GGF + K + R+ + P+T+KQ + ++ + I+
Sbjct: 5 GYGNFGDGGFSDTATGGFQADVDGSQKPQQTRSSITPVTIKQVIQAVALGPDLDFRINNV 64
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM--YVRV 123
++N + V+G++ + I+DG+G +E +W E E + S + YV V
Sbjct: 65 ELNMVRVIGVLRKVDTNASAVNLTIEDGSGSMEVRKWTDETASAAEAEKYSLYLNQYVSV 124
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHL 183
G LK F +K+ + ++RPI+D N++ H + I L L +P+ N +
Sbjct: 125 SGALKEFNNKKGIQQATIRPILDHNQVIYHHLSAISHHLKAQGLH--VRRKPENENGLFV 182
Query: 184 KEYNAISSNHYSFDEGKSIDQMVLDFLRR--PEFLANNNGVHRNVISQQLNLPMDKLMEA 241
E G S+ + VL + P GV +I+Q++N D +
Sbjct: 183 SENGG----------GDSLQERVLQVINELTPSM---QEGVPLQLIAQKVNATDDSVENE 229
Query: 242 LESLNENSLVY 252
+ L ++ +Y
Sbjct: 230 CQELVQSGRIY 240
>gi|295667655|ref|XP_002794377.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286483|gb|EEH42049.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 285
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 30/235 (12%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+L P+T+KQ + S ++ ++ I G +V+ I VG V + + +DDGTG IE
Sbjct: 46 SLRPVTIKQTQDASQTHGDTDFKISGTEVSQIVFVGQVRAISHLTTFVTYKLDDGTGEIE 105
Query: 99 CSRWAHEQMEFNEVNQISKGM-----------------YVRVYGHLKAFQDKRSLNAYSL 141
W +E N VN M Y +V+G L F ++R+ A+ +
Sbjct: 106 VKLW----LEKNAVNPTGDEMEARDAAHPSESEIQVNGYAKVWGKLNNFNNRRNFVAHVI 161
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
RPI + NE HF+E + LY TR G + SS G+
Sbjct: 162 RPITNMNEYHCHFLEATAIHLYYTRGPPGEQQGDKPVAGAAPAVGGGGSSTF----AGRV 217
Query: 202 IDQMVLDFLRRPEFLA----NNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
+ M + E L+ +N G+H ++ + L ++ + E L N L++
Sbjct: 218 LPPMSPLARKVYETLSETPQSNEGLHVQNLAALMGLSAGEVFKGGEELLSNGLIF 272
>gi|194766307|ref|XP_001965266.1| GF24241 [Drosophila ananassae]
gi|190617876|gb|EDV33400.1| GF24241 [Drosophila ananassae]
Length = 245
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S K + +P+ VKQ+ + E + + G VVG
Sbjct: 6 GDFNATQ--TAPAGAASSQKGEGI---VPLVVKQIVDAP---EGNIEMFGMQYAMACVVG 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ ++
Sbjct: 58 IVRNIETSSTKITYTLEDHSGRIDAHYWL-EEGDTLKAPEVMVNNYVKVYGTTRSQAGQK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLY--NTRLRGGSSNQPQMTNSNHLKEYNAISSN 192
+L + L PI+D NE+ +H +E + + + + +GG++ + + + ++ A SN
Sbjct: 117 TLMVFKLLPILDPNEVCTHLLEVLNARYKAEDYQSKGGATGGAAYSGAGSIADFTASQSN 176
>gi|112983110|ref|NP_001036939.1| replication protein A2 [Bombyx mori]
gi|55700850|dbj|BAD69790.1| Replication protein A middle subunit [Bombyx mori]
Length = 259
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 13 AGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITV 72
+GGGF+ + + + R RT P+ ++Q L S +E I G ++ +++
Sbjct: 7 SGGGFLNTTNQFGNTATPKKTGRRAARTA-PIVIRQ--ALHSGEEG-VKIWGTEIQIVSI 62
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWA-HEQMEFNEVN--QISKGMYVRVYGHLKA 129
V + ++ + + + I D TGR+ W E ME + + ++ Y+++YG++K
Sbjct: 63 VARIRSIRMQSTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKT 122
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN---SNHLKEY 186
+ + L A+ + P+ D N IT H+ +CI+ ++ ++ GS + + + +N L
Sbjct: 123 NKGTKVLMAFKIMPVTDVNIITFHYFQCIHNKI---QMEAGSKKEKNIQDVPINNMLPAN 179
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKL--MEALES 244
+ + S G + QM++ L R + G+ + + L M K+ LE
Sbjct: 180 SMVGITETSSVNGLNSRQMMVFNLIRGSTV--EQGISKQDMYASLKDRMTKVEFENILEW 237
Query: 245 LNENSLVYS-IDEFHYKSA 262
+ +YS IDE H+++
Sbjct: 238 MCGEGHIYSTIDEEHFRAT 256
>gi|326487640|dbj|BAK05492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 158
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGH 126
V+++ ++G+V + F + DGTG + W + + S GMYVRV G
Sbjct: 3 VSSVELLGMVTNKTVSMDHCTFDLYDGTGAVNVIYWFEGAQDSKDAWSFSNGMYVRVVGR 62
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY 186
+ + + AY +RPI +FN++T HF+ CIY + S Q ++ H
Sbjct: 63 TTSMEQFFQIKAYIVRPINNFNDVTHHFIYCIYAHI-------DISRQARLQIPEHF--- 112
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLM 239
++ Q + LR P + A +GV ++ ++ D +M
Sbjct: 113 --------------NLQQNIFSVLRDPAYSALEHGVSLKLLRNAVDASQDVIM 151
>gi|331243151|ref|XP_003334219.1| hypothetical protein PGTG_15756 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 223
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 39 RTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+ L P+T+KQ L +SN +S+ SI DV ++ G+V D+ + ++DGTG I
Sbjct: 40 QALRPVTIKQVLDAEASNTDSAISIQDIDVTNVSFCGVVRDIVRNATNVLLQVEDGTGGI 99
Query: 98 ECSRWAH----EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
E +W E F I +VRV G K F +K+++ + I DFNEI
Sbjct: 100 EVRKWIDSSDGESEGFEAETGIQIRDWVRVIGSPKLFNNKKNVAGLRIEKITDFNEINYR 159
Query: 154 FVECIYVQLY 163
++ + Y
Sbjct: 160 LLDANKIMEY 169
>gi|254579595|ref|XP_002495783.1| ZYRO0C02948p [Zygosaccharomyces rouxii]
gi|238938674|emb|CAR26850.1| ZYRO0C02948p [Zygosaccharomyces rouxii]
Length = 259
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 27/247 (10%)
Query: 26 PDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEP 84
P+ S N TL P+T+KQ+ E + I +++ ++ VG+V ++ DK
Sbjct: 6 PNSGESGGPNYRTNTLTPVTIKQILEAKQQVQDGPFVIHNQELHHVSFVGVVRNITDKTS 65
Query: 85 QFIFLIDDGTGRIECSRWAHEQMEFN---------EVNQISK----GMYVRVYGHLKAFQ 131
I+DGT +I+ +W+ + + + +Q+++ G YV+VYG LK F
Sbjct: 66 NVELTIEDGTAQIDVRKWSDDTSDMKMSQEGNGEKDSSQVAQQYHIGEYVKVYGALKEFS 125
Query: 132 DKRSLNAYSLRPIID-FNEITSHFVECIYV-QLYNTRLRGGSSNQPQMTNSNHLKEYNA- 188
K ++ Y++ I+D FN++ H +E I + N +L+ QP M ++ +
Sbjct: 126 GKSNVQ-YAVIKIVDSFNDVIMHHLEVIKCFSIANGKLK-----QPAMEEGAQQQDGKSL 179
Query: 189 -ISSNHYSFDEGKSIDQMVLDFLR-RPEFLANNN-GVHRNVISQQLNLPMDKLMEALESL 245
I + + + ++ + VL + R R + N+ GV Q L+L D + + ++L
Sbjct: 180 FIQEDERAAN-SENPKERVLAYCRVRCQGQDPNDFGVPIPQFVQALDLDEDTVKQCCDTL 238
Query: 246 NENSLVY 252
E +Y
Sbjct: 239 TEQGFIY 245
>gi|195437930|ref|XP_002066892.1| GK24313 [Drosophila willistoni]
gi|194162977|gb|EDW77878.1| GK24313 [Drosophila willistoni]
Length = 239
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECS 100
+LPM +KQ+ L E + + G TVV IV +++ + + ++D TGR++
Sbjct: 25 ILPMLIKQILLLP---EGNIELFGMHYAMTTVVAIVRNIETSSTKITYTLEDHTGRLDAH 81
Query: 101 RWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV 160
W E+ + ++ + YVRVYG ++ +++L + P++D NE+T+H +E +
Sbjct: 82 YWL-EEGDAHKAPDVMLNNYVRVYGTTRSQGGQKTLMVFKALPVLDPNEVTTHLLEVLNA 140
Query: 161 QLYNTRL---RGGSSNQPQMTNSNHLKEYNAISSN 192
+ Y +GGSS T + +++A SN
Sbjct: 141 R-YKAEAYQEKGGSSGHQNST----MPDFSASQSN 170
>gi|403298742|ref|XP_003940167.1| PREDICTED: replication protein A 30 kDa subunit [Saimiri
boliviensis boliviensis]
Length = 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASIDGADVNTITVVGIVCD 78
S+ VP + + R ++ ++P V QL LSS ++ + G V+ +++VGI+
Sbjct: 26 SERGAVPAVKTQRPRVR-IQDIVPCNVNQL--LSSTVLDTVFKVRGITVSQVSIVGIIRG 82
Query: 79 MQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLN 137
+ + IDD T + IE +W + + ++ +S G+YV+V+G LK +SL
Sbjct: 83 AEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQLTPLSVGLYVKVFGILKCPAGTKSLE 141
Query: 138 AYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFD 197
+ + D NE T H +E + + + RG ++ Q +++ + + + +F
Sbjct: 142 VLKIYVLEDMNEFTVHILESVNAHMMLDKARGDATVQSVPVSASEVDDAGDNDESRRNF- 200
Query: 198 EGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDE 256
I VL ++ L + +H + +Q +L + + E ++ L +Y ++D
Sbjct: 201 ----IRDEVLRLIQECPRLEGRS-IH-EIHAQLCHLGIQAIKEVIDYLTLEGHIYPTVDR 254
Query: 257 FHYKSA 262
H+KSA
Sbjct: 255 EHFKSA 260
>gi|402910745|ref|XP_003918013.1| PREDICTED: replication protein A 30 kDa subunit [Papio anubis]
Length = 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS ++ +
Sbjct: 10 GSISAADGESGGSDQLCERDAAPAIKTQRPKVR-IQDVVPCNVNQL--LSSTVFDTVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V +S G YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLSVGAYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK ++L + + D NE T H +E + + + R ++ + +
Sbjct: 126 KVFGILKCPTGTKTLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVFPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H SF I VL + E ++ +Q +L + + EA
Sbjct: 186 EVDDAGDNDESHRSF-----IRDEVLRLIH--ECPQQEGKSIYDLQAQLCDLSLKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
+E L +Y ++D+ H+KSA
Sbjct: 239 IEYLTVEGHIYPTVDQEHFKSA 260
>gi|219112023|ref|XP_002177763.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410648|gb|EEC50577.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 270
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 23/239 (9%)
Query: 39 RTLLPMTVKQLSELSSNDESSASI------DGADVNTITVVGIVCDMQDKEPQFIFLIDD 92
+T++P+T++ + + DE S + DG + + V V +D ++ ++D
Sbjct: 41 QTMVPVTIR-MCLGAMPDEISEGVGGLQLEDGRRLYHVRFVAAVRSFEDFSTNVVYTLED 99
Query: 93 GTGRIECSRWAHEQ--MEFNEVNQ--ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFN 148
GTG +E +W + E+ Q + + +Y++V G +K + K+ + A S+R + N
Sbjct: 100 GTGLMEVKQWLDDNHCTAIAEMRQHTLKENIYLKVVGQIKEYDGKKMVVAESIRVLSTGN 159
Query: 149 EITSHFVECIYVQLYNTRLRGGSSNQPQ---MTNSNHLKEYNAISSNHYSFDEGKSIDQM 205
E+ H +E +Y T R S PQ M N+N +K S+ H + +G D++
Sbjct: 160 ELAHHMLEVVYAG--ETFKRKDSIVAPQSSMMFNTNTVKG----SALHANSSDGGWKDEL 213
Query: 206 VLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSAV 263
L F+R E ++ GV + + + P ++ +A+ + N +YS IDE +YK A+
Sbjct: 214 -LRFIRM-EGDKSDMGVSIDACIKYIGRPSSEVHQAVADFSSNGNLYSTIDENYYKFAM 270
>gi|114689388|ref|XP_001136507.1| PREDICTED: replication protein A 30 kDa subunit [Pan troglodytes]
Length = 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS + +
Sbjct: 10 GSISAADGASGGSDQQCERDATPAMKTQRPKVR-IQDVVPCNVNQL--LSSTVFDPVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V +S G+YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEVRQWFGRE-KVKQVTPLSVGVYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK +SL + + D NE T H +E + + + R ++ + + +
Sbjct: 126 KVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVSPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H +F I VL + +H + +Q +L + + EA
Sbjct: 186 EVNDAGDNDESHRNF-----IQDEVLRLIHECPH-QEGKSIH-ELRAQLCDLSVKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
++ L +Y ++D H+KSA
Sbjct: 239 IDYLTVEGHIYPTVDREHFKSA 260
>gi|397478178|ref|XP_003810430.1| PREDICTED: replication protein A 30 kDa subunit [Pan paniscus]
Length = 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS + +
Sbjct: 10 GSISAADGASGGSDQQCERDATPAMKTQRPKVR-IQDVVPCNVNQL--LSSTVFDPVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V +S G+YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLSVGVYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK +SL + + D NE T H +E + + + R ++ + + +
Sbjct: 126 KVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVSPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H +F I VL + +H + +Q +L + + EA
Sbjct: 186 EVNDAGDNDESHRNF-----IQDEVLRLIHECPH-QEGKSIH-ELRAQLCDLSVKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
++ L +Y ++D H+KSA
Sbjct: 239 IDYLTVEGHIYPTVDREHFKSA 260
>gi|119623199|gb|EAX02794.1| replication protein A4, 34kDa [Homo sapiens]
Length = 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS + +
Sbjct: 10 GSISAADGASGGSDQLCERDATPTIKTQRPKVR-IQDVVPCNVNQL--LSSTVFDPVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V +S G+YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLSVGVYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK +SL + + D NE T H +E + + + R ++ + + +
Sbjct: 126 KVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVSPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H +F I VL + +H + +Q +L + + EA
Sbjct: 186 EVNDAGDNDESHRNF-----IQDEVLRLIHECPH-QEGKSIH-ELRAQLCDLSVKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
++ L +Y ++D H+KSA
Sbjct: 239 IDYLTVEGHIYPTVDREHFKSA 260
>gi|9558731|ref|NP_037479.1| replication protein A 30 kDa subunit [Homo sapiens]
gi|14917036|sp|Q13156.2|RFA4_HUMAN RecName: Full=Replication protein A 30 kDa subunit; Short=RP-A p30;
AltName: Full=Replication factor A protein 4; Short=RF-A
protein 4
gi|20067243|gb|AAM09569.1|AF494047_1 replication protein A complex 34 kDa subunit RPA4 [Homo sapiens]
gi|5729680|gb|AAB08488.2| replication protein A complex 34 kd subunit homolog Rpa4 [Homo
sapiens]
gi|46854555|gb|AAH69791.1| Replication protein A4, 34kDa [Homo sapiens]
gi|46854571|gb|AAH69808.1| Replication protein A4, 34kDa [Homo sapiens]
gi|46854955|gb|AAH69824.1| Replication protein A4, 34kDa [Homo sapiens]
gi|74353576|gb|AAI04014.1| Replication protein A4, 34kDa [Homo sapiens]
gi|74355202|gb|AAI04015.1| Replication protein A4, 34kDa [Homo sapiens]
gi|190691999|gb|ACE87774.1| replication protein A4, 34kDa protein [synthetic construct]
gi|254071361|gb|ACT64440.1| replication protein A4, 34kDa protein [synthetic construct]
gi|312152764|gb|ADQ32894.1| replication protein A4, 34kDa [synthetic construct]
Length = 261
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS + +
Sbjct: 10 GSISAADGASGGSDQLCERDATPAIKTQRPKVR-IQDVVPCNVNQL--LSSTVFDPVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V +S G+YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLSVGVYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK +SL + + D NE T H +E + + + R ++ + + +
Sbjct: 126 KVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVSPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H +F I VL + +H + +Q +L + + EA
Sbjct: 186 EVNDAGDNDESHRNF-----IQDEVLRLIHECPH-QEGKSIH-ELRAQLCDLSVKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
++ L +Y ++D H+KSA
Sbjct: 239 IDYLTVEGHIYPTVDREHFKSA 260
>gi|340718580|ref|XP_003397743.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
terrestris]
Length = 246
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
M+S + D + GGF+ S T K R +T++P + L SS DE
Sbjct: 1 MWSSDLDSSIN-PRGGFLESLNKT------DGIKERKKQTIVPAMIGNLLSFSSTDE--P 51
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-QISKGM 119
+ V +VG+V ++++ + + I+D TG I +W + ++ QI+
Sbjct: 52 KLWEIPVRMFMIVGLVRNVEETTTKISYDIEDETGTITALKWLEMDKKTSDTTMQIN--T 109
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
YVR+ G L+ DKR + + P+ NE+T+H +E YV L
Sbjct: 110 YVRIVGFLREQTDKRHILILRMWPLQTLNELTNHILEVTYVTL 152
>gi|109131484|ref|XP_001088106.1| PREDICTED: replication protein A 30 kDa subunit [Macaca mulatta]
Length = 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS ++ +
Sbjct: 10 GSISAADGGSGGSDQLCERDAAPAIKTQRPKVR-IQDVVPCNVNQL--LSSTVFDTVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V +S G YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLSVGAYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK ++L + + D NE T H +E + + + R ++ + +
Sbjct: 126 KVFGILKCPTGTKTLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVFPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H SF I VL + E + +Q +L + + EA
Sbjct: 186 EVDDAGDNDESHRSF-----IRDEVLRLIH--ECPQQEGKSIYELQAQLCDLSLKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
+E L +Y ++D+ H+KSA
Sbjct: 239 IEYLTVEGHIYPTVDQEHFKSA 260
>gi|326932869|ref|XP_003212534.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 2
[Meleagris gallopavo]
Length = 229
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 50/264 (18%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRN-VRTLLPMTVKQLSELSSNDESSASI 62
G FDG AGG + P + + K R+ ++++P TV QL DE+
Sbjct: 6 GNFDGGYGPAGGYTQSPGGFSSPTGAQAEKKQRSRSQSIVPCTVSQLLAAEQVDEA---- 61
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
F I D +E S+ A + N V + G YV+
Sbjct: 62 -------------------------FRIHD----VEISQEAGSE---NIV--VPPGTYVK 87
Query: 123 VYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
V GHL++FQ+K+SL A+ + P+ + NE T+H +E + + + +S PQ S
Sbjct: 88 VAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLMLASRAPQSFTSAG 147
Query: 183 LKEYNAISSNHYSFDEGKSIDQMVLDFLR---RPEFLANNNGVHRNVISQQL-NLPMDKL 238
+ + + + + VL+ ++ PE G+ + QL N+ + +
Sbjct: 148 MSDVGSYGGGSLPVNGLTAHQSQVLNLIKNCHSPE------GMSLQELKLQLHNVSIPTI 201
Query: 239 MEALESLNENSLVYS-IDEFHYKS 261
+A+E L+ +YS +D+ HYKS
Sbjct: 202 KQAVEFLSSEGHIYSTVDDDHYKS 225
>gi|307189877|gb|EFN74121.1| Replication protein A 32 kDa subunit [Camponotus floridanus]
Length = 239
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 14 GGGFM--PSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTIT 71
GGGF+ +Q T S +++ P+ +K ++ + + I G VNT+T
Sbjct: 10 GGGFLDESTQGGTAKKSQDS------DKSIAPVMIKHITSATGD---GLQIAGKTVNTLT 60
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM--YVRVYGHLKA 129
VG++ +++ + F I D TG + +W + + N + I + YVR+YG ++
Sbjct: 61 FVGVIRNIEQDTTKISFSIQDDTGTVTAVKWL--EADKNPLESICTQINTYVRIYGLIRN 118
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
+++ + + P+ D NE+T HF+E IY L
Sbjct: 119 QNNQQHVLIVRMFPLEDLNELTCHFMEVIYFIL 151
>gi|426396624|ref|XP_004064533.1| PREDICTED: replication protein A 30 kDa subunit [Gorilla gorilla
gorilla]
Length = 264
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 13/229 (5%)
Query: 37 NVRTLLPMTVKQLSELSSND-ESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
++ ++P V QL LSS ++ + G V+ +++VG++ + + IDD T
Sbjct: 45 RIQDVVPCNVNQL--LSSTVFDTVFKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTA 102
Query: 96 R-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
+ IE +W + + +V +S G+YV+V+G LK +SL + + D NE T H
Sbjct: 103 KPIEARQWFGRE-KVKQVTPLSVGVYVKVFGILKCPTGTKSLEVLKIHVLKDMNEFTVHI 161
Query: 155 VECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPE 214
+E + + + R ++ + + + + + +H SF I VL +
Sbjct: 162 LETVNAHMMLDKARCDTTVESVPVSPSEVNDAGDNDESHRSF-----IQDEVLRLIHECP 216
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSA 262
+H + +Q +L + + EA++ L +Y ++D H+KSA
Sbjct: 217 H-QEGKSIH-ELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 263
>gi|296235951|ref|XP_002763117.1| PREDICTED: replication protein A 30 kDa subunit-like [Callithrix
jacchus]
Length = 261
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 19 PSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASIDGADVNTITVVGIVC 77
PS+ P + + R ++ ++P V QL LSS ++ + G V+ ++VVG++
Sbjct: 25 PSERGAAPVVKTQRPRVR-IQNIVPCNVYQL--LSSTVLDTVFKVRGITVSQVSVVGVIR 81
Query: 78 DMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSL 136
+ + + IDD T + IE +W + + ++ +S G+YV+V+G LK +SL
Sbjct: 82 EAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQLTPLSVGLYVKVFGILKCPAGTKSL 140
Query: 137 NAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY--NAISSNHY 194
+ + D NE T H +E + + + RG ++ + + + + + N S ++
Sbjct: 141 EVLKIYVLEDMNEFTVHILETVSAHMMLYKARGDTTLESVPVSPSEVDDAGDNDESRRNF 200
Query: 195 SFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-S 253
DE + +++ + R+ +H + +Q +L + + E ++ L +Y +
Sbjct: 201 IRDE---VLRLIHECPRQ-----EGRSIH-ELQAQLCDLSIQAIKEVIDYLTLEGHIYPT 251
Query: 254 IDEFHYKSA 262
+D H+KSA
Sbjct: 252 VDREHFKSA 260
>gi|224001160|ref|XP_002290252.1| replication protein A2 [Thalassiosira pseudonana CCMP1335]
gi|220973674|gb|EED92004.1| replication protein A2, partial [Thalassiosira pseudonana CCMP1335]
Length = 288
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRN--VRTLLPMTVKQLSELSSNDESSAS------IDGAD 66
GGF SQ T SS R+ +TL+P+T+K + + + ++ D
Sbjct: 16 GGFG-SQNTPSRGGSSDGKPRRDYDAQTLIPVTIKMILDAYATPGAAGGSGDLQLKDERP 74
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKG-----MYV 121
++ + VV V +++ I+DGTG + W +E E + V Q+ + YV
Sbjct: 75 IHMVKVVVAVRSHEERSTNLFLDIEDGTGFTQAKVWVNEGDECSGVVQLRQNACKDHQYV 134
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
R+ G ++ F R + A +RP+ +EIT HF+E + Y ++ Q Q
Sbjct: 135 RIIGQVREFDGTRQIVANDVRPVSSGDEITYHFLEVAHS--YEKHMK----RQQQGGGMG 188
Query: 182 HLKEYNAISSNHYS-----------------FDEGKSIDQMVLDFLRRPEFLANNN--GV 222
N S G +++ VL F+ + NNN GV
Sbjct: 189 IGGAMGYGIGNMASAPPQQGGLGISAQSGGNMGGGSALNDAVLAFI---QGAGNNNDSGV 245
Query: 223 HRNVISQQLN---LPMDKLMEALESLNENSLVYS-IDEFHYK 260
H N I+ +++ + A+ +L+ +YS IDE HY+
Sbjct: 246 HVNEITAKVSANGFTESDVRTAINNLSNEGHIYSTIDENHYQ 287
>gi|332251800|ref|XP_003275037.1| PREDICTED: replication protein A 30 kDa subunit-like [Nomascus
leucogenys]
Length = 261
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG P + K R ++ ++P V QL LSS ++ +
Sbjct: 10 GSISAADGASGGSDQLCGRDAAPAVKTQRPKVR-IQEVVPCNVNQL--LSSTVFDTVFKV 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + + IDD T + IE +W + + +V ++ G+YV
Sbjct: 67 RGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLAVGVYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK +SL + + D NE T H +E + + + R ++ + + +
Sbjct: 126 KVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVSPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H +F I VL + +H + +Q +L + + EA
Sbjct: 186 EVDDAGDNDESHRNF-----IRNEVLRLIHECPH-QEGKSIH-ELQAQLCDLSVKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
++ L +Y ++D H+KSA
Sbjct: 239 IDYLTVEGHIYPTVDREHFKSA 260
>gi|326439177|ref|NP_001191993.1| replication protein A2 [Acyrthosiphon pisum]
gi|239790330|dbj|BAH71733.1| ACYPI003814 [Acyrthosiphon pisum]
Length = 249
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF T P+++ T++ + +++L SN+E+ + + VVG
Sbjct: 7 GGF---NVTMTQSPTTASGVEPKQNTVISVAIREL--FDSNEENKNT-------HVVVVG 54
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
I+ ++ + + +F I+D TGR+ C +W E E + ++ + Y +V G + DK
Sbjct: 55 IIKQVETQALKNMFTIEDNTGRLLCIQWGDEN-ELSRYPKLIENAYFKVVGSKRMQNDKV 113
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
+L +S+RP+ NE+T H + I + + S Q Q T +N
Sbjct: 114 TLLCHSVRPLETLNELTHHLLSIIALPYITEEINVASGTQ-QSTATNQ 160
>gi|225709990|gb|ACO10841.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
P K + L+P+T+ + E + E S SI+G +V + ++G V + ++ + +
Sbjct: 19 PGGGEKKRTRAQNLVPVTISSVLECT---EESLSIEGLEVGMVCLLGKVVSISNEATKSV 75
Query: 88 FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
+ + D T +I+ +W E + ++ + + + M+ RV G ++ K+ + A+ + P+
Sbjct: 76 YSLKDKTAQIDVIQWLDEGQDASK-DDVCEDMHARVIGTVRNSGGKKHIMAFKISPVEAM 134
Query: 148 NEITSHFVECIYVQLYNTRLR 168
+EI H +E Y +L +L+
Sbjct: 135 SEIKGHALEVEYARLKIKQLK 155
>gi|225711774|gb|ACO11733.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
P K + L+P+T+ + E + E S SI+G +V + ++G V + ++ + +
Sbjct: 19 PGGGEKKRTRAQNLVPVTISSVLECT---EESLSIEGLEVGMVCLLGKVVSISNEATKSV 75
Query: 88 FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
+ + D T +I+ +W E + ++ + + + M+ RV G ++ K+ + A+ + P+
Sbjct: 76 YSLKDKTAQIDVIQWLDEGQDASK-DDVCEDMHARVIGTVRNSGGKKHIMAFKISPVEAM 134
Query: 148 NEITSHFVECIYVQLYNTRLR 168
+EI H +E Y +L +L+
Sbjct: 135 SEIKGHTLEVEYARLKIKQLK 155
>gi|344233012|gb|EGV64885.1| replication protein A, subunit RPA32 [Candida tenuis ATCC 10573]
Length = 251
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 46/262 (17%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRT-LLPMTVKQLSELSSN-DESSASIDGADV 67
A+ GGF Q T S+ + R+ L P+T+KQ+++ S ++ I+G ++
Sbjct: 8 GAYGDGGF--DQGETSFQQDQQSSQRQGTRSSLTPVTIKQINDSSQPLPDADFQINGVNL 65
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------AHEQMEFNEVNQISKGM 119
N ++ VG++ + + I+DGTG +E +W + E ++ ++ K
Sbjct: 66 NMVSFVGVLRKVDNGNSATTLTIEDGTGALEVRKWIDDNTSSVSEESTKYADM----KDK 121
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN 179
YV V G LK F K+++ ++ + D N++ H + I V + + + S N + N
Sbjct: 122 YVYVTGSLKEFSSKKAVQNANITEVTDHNQVLYHNLSAISVHITSQGITKKSENALFVGN 181
Query: 180 --------SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL 231
S + ++ +SSN S E GV +I+Q+L
Sbjct: 182 DDVSHSAGSQEEQVFSTVSSNAASMPE----------------------GVPLQLIAQKL 219
Query: 232 NLPMDKLMEALESLNENSLVYS 253
N+ D+ L E Y+
Sbjct: 220 NITADEAFVICTKLVEEGRFYT 241
>gi|432115744|gb|ELK36929.1| Replication protein A 30 kDa subunit [Myotis davidii]
Length = 262
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 15/263 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID 63
G F A+ +G PSQ P + S+ R + ++P V QL S D+ +
Sbjct: 10 GGFFAASGASGSNEGPSQGGMAPFLKAPRSRAR-IEPIIPCCVNQLLTASLVDDVF-KVR 67
Query: 64 GADVNTITVVGIVCDMQDKEPQFI-FLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VGI+ ++ P +I + IDD T + I+ W E+ G+Y
Sbjct: 68 GIVVSQVSIVGII-RKAERAPNYILYKIDDMTTKPIDARHWLGRNKAKQELAPCPVGVYA 126
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V G L+ + R L +R + D NE T+H +E + NT + + S
Sbjct: 127 KVLGILRGSAEVRILEVLQIRVLEDMNEFTAHILETV-----NTHMMLAKGQEEAYGQSA 181
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLME 240
A + + + VL +R + G + +L +L + + +
Sbjct: 182 PSAPPEAAQAPEPCEVRPQVVQADVLRLIRE---CPHQEGKSVGELHAELGSLSIKAIKD 238
Query: 241 ALESLNENSLVY-SIDEFHYKSA 262
ALE L +Y ++D H+KSA
Sbjct: 239 ALEYLMVEGHIYPTVDGQHFKSA 261
>gi|194374123|dbj|BAG62374.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
++ +W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E
Sbjct: 6 MDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILE 65
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---R 212
I + ++ S ++ + E N + G ++ Q VL+ ++ R
Sbjct: 66 VINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVAQNQVLNLIKACPR 125
Query: 213 PEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
PE L +++ +Q ++ + + +A++ L+ +YS +D+ H+KS
Sbjct: 126 PEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKS 170
>gi|225710782|gb|ACO11237.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
P K + L+P+T+ + E + E S SI+G +V + ++G V + ++ + +
Sbjct: 19 PGGGEKKRTRAQNLVPVTISSVLECT---EESLSIEGLEVGMVCLLGKVVSISNEATKSV 75
Query: 88 FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
+ + D T +I+ +W E + + + + + M+ RV G ++ K+ + A+ + P+
Sbjct: 76 YSLKDKTAQIDVIQWLDEGQDASR-DDVCEDMHARVIGTVRNSGGKKHIMAFKISPVEAM 134
Query: 148 NEITSHFVECIYVQLYNTRLR 168
+EI H +E Y +L +L+
Sbjct: 135 SEIKGHTLEVEYARLKIKQLK 155
>gi|351697889|gb|EHB00808.1| Replication protein A 32 kDa subunit [Heterocephalus glaber]
Length = 396
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 46/236 (19%)
Query: 26 PDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP 84
P S + K+R + ++P T+ QL + DE I +++ +TVVGI+ +
Sbjct: 28 PTASQAEKKSRARAQYIVPCTISQLLSATLVDEV-FKIGNVEISQVTVVGIIRQAEKAPT 86
Query: 85 QFIFLIDDGTGR-IECSRW----------AHEQMEFNEVNQISKGM-------------- 119
++ IDD T ++ +W A + M ++N+ + +
Sbjct: 87 NIVYKIDDMTAAPMDVRQWVDTDNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKPS 146
Query: 120 ---------------YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYN 164
YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + +
Sbjct: 147 TQDTGGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMML 206
Query: 165 TRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---RPEFL 216
++ S ++ + E S N + G ++ Q VL+ ++ RPE L
Sbjct: 207 SKPSTQPSAGRASISNPGMGEPGNFSGNSFMPANGLTMTQNQVLNLIKACPRPEGL 262
>gi|430814638|emb|CCJ28161.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 33/164 (20%)
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN 179
YVRV G LKAF +KR + A+ +R I D NE+ HF+E I + LY TR + N
Sbjct: 8 YVRVIGQLKAFNNKRHIGAHHIRLITDLNEVQYHFLEAIAIHLYFTR--------GPLQN 59
Query: 180 SNHLKEYNAISSN--HYSFDEGKSID-----QMVLD----FLRR--------PEFLANNN 220
K + ++ N HY F + S+ Q+ L +L++ P+ N
Sbjct: 60 GVFSKNHTSVDGNMSHYDFQDSISMKGALNAQIALHNLSPYLQKVMAAVHAAPD---TNE 116
Query: 221 GVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSAV 263
GV+ + +S+ + + +A+E L + L+Y +ID+ H KS +
Sbjct: 117 GVNIHQLSKAIG--GGNIEQAIEELTSDGLLYTTIDDEHVKSTI 158
>gi|350409924|ref|XP_003488889.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
impatiens]
Length = 246
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
M+S + D + GGF+ S T +K R +T++P + L SS DE
Sbjct: 1 MWSSDLDSSIN-PRGGFLESFNKT------DGTKERKKQTIVPAMIGNLLSFSSTDE--P 51
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-QISKGM 119
+ +VG+V ++++ + + I+D TG I +W + ++ QI+
Sbjct: 52 KLWEIPARMFMIVGLVRNVEETTTKISYDIEDETGTITALKWLEMDKKTSDTTMQIN--T 109
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
YVR+ G L+ DKR + + P+ NE+ +H +E YV L
Sbjct: 110 YVRIVGFLREQTDKRHILILRMWPLQTLNELINHILEVTYVTL 152
>gi|344302683|gb|EGW32957.1| hypothetical protein SPAPADRAFT_135817 [Spathaspora passalidarum
NRRL Y-27907]
Length = 262
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 28 PSSSFSKNRNVRT-LLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQ 85
P S+ + + VR+ L P+T+KQ++E + + ++ ++N ++ VGI+ + E
Sbjct: 24 PVSAGANSAAVRSSLTPVTIKQINESTQPVPDGPFHVNNMELNMVSFVGIIRKITAFESA 83
Query: 86 FIFLIDDGTGRIECSRWAH-EQMEFNEVNQISKGM---YVRVYGHLKAFQDKRSLNAYSL 141
F I+DGTG E +W + +Q + + G YV V G LKAF K SL +
Sbjct: 84 ISFTIEDGTGSTEIRKWINSDQTSKDAEEERYAGWLNTYVCVGGSLKAFNGKTSLQYSGI 143
Query: 142 RPIIDFNEITSHFVECIYVQL 162
+ D N++ H + I+ L
Sbjct: 144 HQVTDSNQVVYHHLAAIHTHL 164
>gi|349934880|dbj|GAA29387.1| replication factor A2 [Clonorchis sinensis]
Length = 167
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN 179
YVRV+GH++ FQ + + A+ + P+ D NE+T+H +E IY ++ NT+ + ++ ++
Sbjct: 28 YVRVHGHVRNFQGAKQIIAFRVLPVTDMNELTTHIMEVIYTRMLNTKAKLDEASGANLSK 87
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKL 238
N S+ ++ + + + L G+ +S++L +P ++
Sbjct: 88 INS-------SATNFGGNVANGLTALQNQILAIVRAFVGERGIPVTQLSEKLRGIPERQI 140
Query: 239 MEALESLNENSLVYS-IDEFHYKS 261
E L+ L+ VYS +D+ H+++
Sbjct: 141 RENLDFLSGEGYVYSTVDDDHFRA 164
>gi|242011240|ref|XP_002426363.1| Replication protein A 32 kDa subunit, putative [Pediculus humanus
corporis]
gi|212510440|gb|EEB13625.1| Replication protein A 32 kDa subunit, putative [Pediculus humanus
corporis]
Length = 208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVV 73
GG F+ ++ TT P+ S S + L P+TV+Q+ E E + +++
Sbjct: 9 GGYFVGNEPTT---PNQSVSSAIRQQFLCPVTVRQVLEAP---EQGLKVGSLTATMVSLC 62
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ--MEFNEVNQISKGMYVRVYGHLKAFQ 131
G+V +++ F + D TG I+C W Q + ++ + + Y VYG +K Q
Sbjct: 63 GVVSNVEITSTTIKFSLTDDTGIIDCLEWLETQDNSKISKTTNLLENNYYHVYGCVKYPQ 122
Query: 132 DKRSLNAYSLRPIIDFNEITSHFVECIYVQLY 163
R + + + DFNEIT+ +E + Y
Sbjct: 123 GSRRIMVFKTVKVTDFNEITAFMLEVLSTNEY 154
>gi|297710508|ref|XP_002831919.1| PREDICTED: replication protein A 30 kDa subunit [Pongo abelii]
Length = 261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 4 GEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSND-ESSASI 62
G A +GG + P + K R ++ ++P V QL LSS ++ I
Sbjct: 10 GSISAADGASGGSDPLCERDAAPAIKTQRPKVR-IQDVVPCNVNQL--LSSTVFDTVFKI 66
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYV 121
G V+ +++VG++ + IDD T + IE +W + + +V ++ G+YV
Sbjct: 67 RGIIVSQVSIVGVIRGADKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLTVGVYV 125
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+V+G LK +SL + + D NE T H +E + + + ++ + + +
Sbjct: 126 KVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKACRDTTVESVPVSPS 185
Query: 182 HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEA 241
+ + +H SF I VL + +H + +Q +L + + EA
Sbjct: 186 EVNDAGDNDESHRSF-----IRDEVLRLIHECPH-QEGKSIH-ELQAQLCDLSVKAIKEA 238
Query: 242 LESLNENSLVY-SIDEFHYKSA 262
++ L +Y ++D H+KSA
Sbjct: 239 IDYLTVEGHIYPTVDREHFKSA 260
>gi|332375126|gb|AEE62704.1| unknown [Dendroctonus ponderosae]
Length = 265
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 31/273 (11%)
Query: 2 YSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKN-RNVRTLLPMTVKQLSELSSNDESSA 60
Y+ F+ + A GGF+ + TT PS K+ R +++++P+ V+ L + S DE
Sbjct: 6 YNSGFNDSTA---GGFLNN--TTNDSPSVKQPKSVRRLQSVVPLVVRMLRD--SGDE--F 56
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQM--EFNEVNQISKG 118
+ G V +++VGI+ + + + + I D TG I+ W + E ++ + +G
Sbjct: 57 KLFGMPVQIVSLVGILLEFDVQSTKASYTIQDHTGSIKAIFWLEGENCDEACKMPAVKEG 116
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQ-- 176
YV+VYG ++ + +++L + PI D N I +H +E I +L + ++ Q +
Sbjct: 117 GYVKVYGTIRNQEGEKALMVLKMFPIDDCNIILTHLLEVIDTRLQAEVMSKNTAQQIKQN 176
Query: 177 -----MTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL 231
+ NS + + N + + ++ I V FL+ + A ++ S
Sbjct: 177 NPGATLANSMTMFDENVVENGQHNL---SGIQLRVYKFLQSDQSQAG-----PDIASILG 228
Query: 232 NLPMDKLMEALESL----NENSLVYSIDEFHYK 260
+ P ++ +A E+L NE +ID H+K
Sbjct: 229 HFPPNQRKDANEALDFLVNEGHAYSTIDNEHFK 261
>gi|242088237|ref|XP_002439951.1| hypothetical protein SORBIDRAFT_09g023290 [Sorghum bicolor]
gi|241945236|gb|EES18381.1| hypothetical protein SORBIDRAFT_09g023290 [Sorghum bicolor]
Length = 242
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 42 LPMTVKQLSEL--SSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
+ +T+K + + S D+ I+ + V T+ + G++ ++ E + I DGTG I
Sbjct: 34 MKVTIKMIRDACGESRDQGRLVINESQVFTVELCGMLTRIEQHERWTDYEIYDGTGSIRS 93
Query: 100 SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIY 159
W ++ + +++ G Y V G +N R + ++N +T H + I+
Sbjct: 94 RIWPRDEDGYTDMSGSRVGGYYAVNGTCTVIDGDAMINTLIAREVTNYNSVTEHMLSVIH 153
Query: 160 VQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS----ID-QMVLDFLRRPE 214
HL+ + +SSN G ID + VL L E
Sbjct: 154 ---------------------EHLELGHRLSSNRIVDRMGTKAQLDIDKEGVLMLLSSDE 192
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSA 262
+G+ + I ++ L D + + L+ L LVY ++DE+HYK A
Sbjct: 193 EREKEDGLTEDYIRAKMGLDRDNMRKVLDGLINEGLVYNTVDEYHYKMA 241
>gi|224143432|ref|XP_002324954.1| predicted protein [Populus trichocarpa]
gi|222866388|gb|EEF03519.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 166 RLRGGSSNQPQMTNSN-----------HLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPE 214
+L GG+S QPQM S+ + + + S ++ D K DQ+VLD L++
Sbjct: 21 QLHGGTSTQPQMVESSMNTPLWSGSNGYQTSTSNLMSKQFNVDGPKDFDQVVLDCLQQSS 80
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYSIDEFHYKS 261
G+ + QQL LPM+K+ E++ SL + L+YS E + +
Sbjct: 81 STGQEKGMQMVELCQQLKLPMEKIKESIRSLEDEGLIYSTIEMSFTT 127
>gi|395854822|ref|XP_003799878.1| PREDICTED: replication protein A 32 kDa subunit isoform 2 [Otolemur
garnettii]
Length = 174
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 16/173 (9%)
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
++ +W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E
Sbjct: 6 MDVRQWVDTDDTGSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILE 65
Query: 157 CIYVQLYNTRLRGGSSNQP-QMTNSNH-LKEYNAISSNHYSFDEGKSIDQ-MVLDFLR-- 211
+ + T + S P ++ SN + E + + G + Q VL+ ++
Sbjct: 66 VVNAHM--TLSKANSQPPPGRVPISNPGMSEAGSFGGTSFMPANGLTAAQNQVLNLIKAC 123
Query: 212 -RPEFLANNNGVHRNVISQQL-NLPMDKLMEALESLNENSLVYS-IDEFHYKS 261
RPE G++ + QL ++P+ + +A++ L+ +YS +D+ H+KS
Sbjct: 124 PRPE------GLNFYDLKNQLKHMPVASIKQAVDFLSNEGHIYSTVDDDHFKS 170
>gi|351704547|gb|EHB07466.1| Replication protein A 32 kDa subunit [Heterocephalus glaber]
Length = 169
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
++ +W E + Y++V GHL++FQ+K+SL A+ + P+ D NE T+H +E
Sbjct: 1 MDVRQWVDTDDTGGENTVVPPETYMKVVGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILE 60
Query: 157 CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQ-MVLDFLR---R 212
+ + ++ S + + E S N + G ++ Q VL+ +
Sbjct: 61 VVKAHMMLSKPSTHPSAGRASISYPGMGEPGNFSGNSFMLANGLTMTQNQVLNLINASPS 120
Query: 213 PEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
PE L +++ +Q ++P+ + +A++ L+ +YS +D+ H+KS
Sbjct: 121 PEGLN-----FQDLRNQLQHMPIASVKQAVDFLSNEGHIYSTVDDDHFKST 166
>gi|50555129|ref|XP_504973.1| YALI0F03993p [Yarrowia lipolytica]
gi|49650843|emb|CAG77780.1| YALI0F03993p [Yarrowia lipolytica CLIB122]
Length = 238
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 34 KNRNVRTLLPMTVKQLSELSSNDESSAS--IDGADVNTITVVGIVCDMQDKEPQFIFLID 91
K N +++P+T+KQL++ +N + + IDG + + G + ++ K F+ +D
Sbjct: 17 KPANSGSVIPVTLKQLNDAFNNSPPAGALQIDGVPSQHVALCGKIILLESKPSFFMLTVD 76
Query: 92 DGTGRIECS--RWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
DGTG + R E E +E+ + +G Y+ LK+F +K +N+ + + DFN
Sbjct: 77 DGTGSTDVRLFRKGTEDDENSELT-VKEGDYISCVAALKSFNNKWMVNSSGVAAVTDFNH 135
Query: 150 ITSHFVECIYVQLYNTRLR--GGS 171
+ H ++ + L T + GG+
Sbjct: 136 VIFHQMQSLQTHLKATGAKPSGGA 159
>gi|402468639|gb|EJW03766.1| hypothetical protein EDEG_01961 [Edhazardia aedis USNM 41457]
Length = 234
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 119/258 (46%), Gaps = 31/258 (12%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKN-RNVRTLLPMTVKQLSELSSNDESSASIDGADVN 68
+ + GGF+ S P + + RN+R+L T+K L + ++ +++ +D + ++
Sbjct: 2 SEYDDGGFIHSS------PKKDYKQQQRNLRSL---TIKHL-KTANIEQNPYQLDNSGLS 51
Query: 69 TITVVGIVCDMQDKEPQFI-FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
I ++G V ++++ + F ++D T I C+ W IS+ +RV G++
Sbjct: 52 HIQLIGFVSNVKEISGKGKGFDLNDNTDVISCTYWISSDHSSEVCGFISERNLLRVVGNI 111
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL-YNTRLRGGSSNQPQMTNSNHLKEY 186
+ Q K S L+ + D N +T H++ CI+ L YN RL+ + +
Sbjct: 112 RVNQSKISFTVAMLKIVDDVNFMTFHYLNCIHQFLFYNNRLKRCDIKKSSKKFVPMEAGF 171
Query: 187 NAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL--NLPMDKLMEALES 244
+ + S+ +LD R+ + ++G+H + + + L ++ + +E
Sbjct: 172 SRLQSD-------------ILDIYRKYQ---EDDGLHTDAVVKMLGGKYQESEIRDTIEC 215
Query: 245 LNENSLVYSIDEFHYKSA 262
L + +YSI + HYK+
Sbjct: 216 LLSDCHLYSISDMHYKTT 233
>gi|149240019|ref|XP_001525885.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450008|gb|EDK44264.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 262
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 33/253 (13%)
Query: 10 AAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDG----- 64
++ GGF + S +K + +L P+T+KQ+ E + A+ DG
Sbjct: 22 TGYSQGGFSNENGS-----QSGGTKTQGRSSLTPVTIKQILE-----ATQATPDGDFLVH 71
Query: 65 -ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEF----NEVNQISKGM 119
++ I+ VG+V + + I ++DGTG I+ +W E E K
Sbjct: 72 NVTLSMISFVGVVRKVDGQGMSVIITVEDGTGSIDVRKWVDESTTSLAVETEKYSAFKNK 131
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTN 179
YV V G LK +K+S+ ++ I D N+I H + I L + L P+ +
Sbjct: 132 YVFVGGSLKLHMNKKSIQNAAIALIEDSNQIIYHHLSAIDHHLKSQGL-------PKSSG 184
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLM 239
+N + D +S+ VL F+ E +GV N I+++L + D+ +
Sbjct: 185 ANTDGDLFVKDE-----DSNESLMNRVLKFITE-ESKTMQDGVPINYIAEKLGISKDEGL 238
Query: 240 EALESLNENSLVY 252
L EN +Y
Sbjct: 239 RQCNELIENGRIY 251
>gi|195148506|ref|XP_002015214.1| GL19582 [Drosophila persimilis]
gi|198474871|ref|XP_001356842.2| GA21663 [Drosophila pseudoobscura pseudoobscura]
gi|194107167|gb|EDW29210.1| GL19582 [Drosophila persimilis]
gi|198138584|gb|EAL33908.2| GA21663 [Drosophila pseudoobscura pseudoobscura]
Length = 237
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ +KQ+ + E + + G +V
Sbjct: 6 GDFNATQ--TAPAGAAS---NQKGEGIVPLFIKQIVDAP---EGNIELFGMQFGMACLVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ ++
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMLNNYVKVYGTTRSQAGQK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLY--NTRLRGGSS 172
SL + L P++D NE+ +H +E + + + + +GGSS
Sbjct: 117 SLMVFKLLPVLDPNEVCTHLLEALNARYKAEDYQNKGGSS 156
>gi|167521223|ref|XP_001744950.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776564|gb|EDQ90183.1| predicted protein [Monosiga brevicollis MX1]
Length = 837
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 16 GFMPSQATTVPDPSSSFSKNRN-----VRTLLPMTVKQLSELSSNDESSASIDGADVNTI 70
G P+ TTV + ++ N V L+P++V QL + N E ++ D++ +
Sbjct: 504 GLPPALNTTVAPQRVATTQPLNAGLTRVEGLMPVSVCQLRSATKNGEHY-RLNNQDIDKV 562
Query: 71 TVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ----ISKGMYVRVYGH 126
+VG++ + + + + ++D TG I +RW+ + E + + YV+V G
Sbjct: 563 MIVGVIRSVDARATRVTYTVEDHTGAISATRWSSNAGDEEESSAAPDLYRENDYVQVVGQ 622
Query: 127 LKA-FQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
L++ ++ L AY++ + + N++T H + ++ L T+
Sbjct: 623 LRSDNENNLQLTAYNISKLTNGNQLTHHLISIVHAHLRLTK 663
>gi|19528549|gb|AAL90389.1| RH07841p [Drosophila melanogaster]
Length = 246
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPTGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L PI+D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPILDPNEVCTHLLEVL-----NARYRA 146
>gi|170040961|ref|XP_001848249.1| insect replication protein a [Culex quinquefasciatus]
gi|167864549|gb|EDS27932.1| insect replication protein a [Culex quinquefasciatus]
Length = 248
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 11 AFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTI 70
+F GGGF S A D + + +LP+ V+ + E S E+ + G +
Sbjct: 4 SFGGGGFNASSAGGAKDENKA-------EGVLPLMVRHILESS---EAGIQLFGFQYAMV 53
Query: 71 TVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAF 130
T VGIV + + + ++D TG+++ W E N + + YVR+ G +++
Sbjct: 54 TFVGIVRHIDHSSTKVTYRVEDHTGQVDAHLWLEEGDNMN-IPGVLINTYVRIVGSVRSQ 112
Query: 131 QDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+++ + + I NE+T+H +E + N R +G
Sbjct: 113 GGSKAVMIFKIAQIDSPNEVTTHLLEVL-----NARYKG 146
>gi|225709452|gb|ACO10572.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI 87
P K + L+P+T+ + E + E S SI+G +V + ++G V + ++ + +
Sbjct: 19 PGGGEKKRTRAQNLVPVTISSVLECT---EESLSIEGLEVGMVCLLGKVVSISNEATKGV 75
Query: 88 FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
+ + D T +I+ +W E + ++ + + + M+ RV G ++ K+ + A+++ P+
Sbjct: 76 YSLKDKTAQIDVIQWLDEGQDASK-DDVCEDMHARVIGTVRNSGGKKHIMAFNISPVEAM 134
Query: 148 NEITSHFVECIYVQLYNTRLR 168
+EI +E Y +L +L+
Sbjct: 135 SEIKGLTLEVEYARLKIKQLK 155
>gi|391333319|ref|XP_003741065.1| PREDICTED: replication protein A 32 kDa subunit-like [Metaseiulus
occidentalis]
Length = 265
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 56/283 (19%)
Query: 14 GGGFMPSQATTVPDPSSSFS-------KNRNVRTLLPMTVKQLSELSSNDESSASIDGAD 66
GGF D SSFS + R L P+T + ++ + S +
Sbjct: 7 AGGF---------DIDSSFSDGVTKKDRQRAPPNLTPLTCADIHSMTGERWTFGS---HE 54
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFN--EVNQISKGMYVRV 123
+ +VG+V ++ + ++DD TG + C + M+ N E+ ++++GMY++V
Sbjct: 55 AEKVCLVGVVRSIEISSLKATLVVDDRTGPPVIC-----QSMDTNDAELERLNEGMYIKV 109
Query: 124 YGHLKAFQDKRS------LNAYSLRPIIDFNEITSHFVECIYVQLY----NTRLRG--GS 171
+G L+ R +N LR + NE++ H +EC+ ++Y RL+ G
Sbjct: 110 FGTLRKQSVNRDEEMKTMINLIKLRAVSSLNEVSLHMMECVQARVYYLTAEKRLQAILGE 169
Query: 172 SNQPQMTNSNHLKEYNAISSNHYSFDEG-----KSIDQMVLDFLRRPEFLANNN-GVHRN 225
S P + + +A +N +FD+ QMV ++ E AN++ G+H N
Sbjct: 170 SQAPSQPSKS-----SAPINNGTTFDDSGVPGLNRKQQMVYQAIK--EAGANDSQGLHIN 222
Query: 226 VISQQLNLPMDKLMEALESL----NENSLVYSIDEFHYKSAVN 264
+ Q++N+ EA ++L NE + +IDE Y N
Sbjct: 223 KLLQKINMHGVSEREARDALEFLSNEGHVYTTIDEDTYACLEN 265
>gi|194878552|ref|XP_001974086.1| GG21537 [Drosophila erecta]
gi|190657273|gb|EDV54486.1| GG21537 [Drosophila erecta]
Length = 246
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPAGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNIETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEAL-----NARYRA 146
>gi|116811971|emb|CAL26152.1| CG9273 [Drosophila melanogaster]
Length = 246
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPTGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|19921606|ref|NP_610077.1| replication protein A2, isoform A [Drosophila melanogaster]
gi|442628687|ref|NP_001260652.1| replication protein A2, isoform B [Drosophila melanogaster]
gi|17861854|gb|AAL39404.1| GM04951p [Drosophila melanogaster]
gi|22946959|gb|AAF53948.2| replication protein A2, isoform A [Drosophila melanogaster]
gi|116811973|emb|CAL26153.1| CG9273 [Drosophila melanogaster]
gi|116811977|emb|CAL26155.1| CG9273 [Drosophila melanogaster]
gi|116811979|emb|CAL26156.1| CG9273 [Drosophila melanogaster]
gi|116811981|emb|CAL26157.1| CG9273 [Drosophila melanogaster]
gi|116811983|emb|CAL26158.1| CG9273 [Drosophila melanogaster]
gi|116811985|emb|CAL26159.1| CG9273 [Drosophila melanogaster]
gi|116811989|emb|CAL26161.1| CG9273 [Drosophila melanogaster]
gi|116811991|emb|CAL26162.1| CG9273 [Drosophila melanogaster]
gi|116811993|emb|CAL26163.1| CG9273 [Drosophila melanogaster]
gi|220942772|gb|ACL83929.1| RPA2-PA [synthetic construct]
gi|223967015|emb|CAR93244.1| CG9273-PA [Drosophila melanogaster]
gi|223967017|emb|CAR93245.1| CG9273-PA [Drosophila melanogaster]
gi|223967019|emb|CAR93246.1| CG9273-PA [Drosophila melanogaster]
gi|223967021|emb|CAR93247.1| CG9273-PA [Drosophila melanogaster]
gi|223967023|emb|CAR93248.1| CG9273-PA [Drosophila melanogaster]
gi|223967025|emb|CAR93249.1| CG9273-PA [Drosophila melanogaster]
gi|223967027|emb|CAR93250.1| CG9273-PA [Drosophila melanogaster]
gi|223967029|emb|CAR93251.1| CG9273-PA [Drosophila melanogaster]
gi|223967033|emb|CAR93253.1| CG9273-PA [Drosophila melanogaster]
gi|223967035|emb|CAR93254.1| CG9273-PA [Drosophila melanogaster]
gi|223967037|emb|CAR93255.1| CG9273-PA [Drosophila melanogaster]
gi|440214018|gb|AGB93187.1| replication protein A2, isoform B [Drosophila melanogaster]
Length = 246
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPTGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|116811975|emb|CAL26154.1| CG9273 [Drosophila melanogaster]
Length = 246
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPTGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|339259190|ref|XP_003369781.1| replication protein A subunit [Trichinella spiralis]
gi|316966007|gb|EFV50643.1| replication protein A subunit [Trichinella spiralis]
Length = 279
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 60/295 (20%)
Query: 6 FDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGA 65
FDG GGF+ SQ+ P+ S R ++P+T ++ +S E + I
Sbjct: 5 FDGGV----GGFLASQSGDRPEIRKS------QREIVPVTCSMINNMSPG-EDNLRIGTY 53
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAH-------------------- 104
+V+ + +V ++ D+ + IDD T I +W
Sbjct: 54 EVSQVCIVAVIRDVSYGDIYTDITIDDMTSSPITARQWVKVHSIYVVKVVTIQYLAVICI 113
Query: 105 -EQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL- 162
++ + E Q V+V+G++ FQ K+ L + + + D N++T H +E + +L
Sbjct: 114 VKENKNTEEMQKKCNSLVKVFGNITTFQKKKILTVFGMMTVADLNDLTVHLLEVLRAKLS 173
Query: 163 -----YNTRLRGGSSNQPQMTNSNHLKEYNAI---SSNHYSFDEGKSIDQMVLDFLRRP- 213
NT + SN+P+ ++ Y + N ++D G L LR
Sbjct: 174 FEKDCLNTDRK--ESNRPK--DATPFMSYGTSEMQADNKMTYDNG-------LSGLRAEI 222
Query: 214 -EFLANNNGVH----RNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYKSA 262
FL+NN+ + ++ S ++ M KL + +E L +YS IDE H+K++
Sbjct: 223 YRFLSNNDTIEGCSVNDIKSHFAHVTMSKLRDEIEFLCCEGHIYSTIDEDHFKAS 277
>gi|195580553|ref|XP_002080100.1| GD21666 [Drosophila simulans]
gi|116811995|emb|CAL26164.1| CG9273 [Drosophila simulans]
gi|194192109|gb|EDX05685.1| GD21666 [Drosophila simulans]
Length = 246
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPAGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|195351987|ref|XP_002042497.1| GM23291 [Drosophila sechellia]
gi|194124366|gb|EDW46409.1| GM23291 [Drosophila sechellia]
Length = 246
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPAGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|407839347|gb|EKG00293.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi]
Length = 264
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQD----------KEPQ 85
R + + P+T+KQL E E +DG +V TVVG V +D
Sbjct: 32 RRMHPIRPVTIKQLLEAQRVGEGVMVVDGREVTQATVVGRVIGYEDDTANRVTGALTAKH 91
Query: 86 FIFLIDDGTGRIECSRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ + I DGTG + +W A Q E V YVR G +K +Q+ + ++R
Sbjct: 92 YGYRITDGTGLVVVRQWMDADHQEEPLPVQ-----CYVRASGTVKVWQNAPIVTG-TVRL 145
Query: 144 IIDFNEITSHFVECIYVQLYNTR 166
+ D NE+ H+++ I L TR
Sbjct: 146 VSDCNELNYHYLDVILTHLRLTR 168
>gi|71410456|ref|XP_807521.1| replication Factor A 28 kDa subunit [Trypanosoma cruzi strain CL
Brener]
gi|70871542|gb|EAN85670.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi]
Length = 264
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQD----------KEPQ 85
R + + P+T+KQL E E +DG +V TVVG V +D
Sbjct: 32 RRMHPIRPVTIKQLLEAQRVGEGVMVVDGREVTQATVVGRVIGYEDDTTNRVTGALTAKH 91
Query: 86 FIFLIDDGTGRIECSRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ + I DGTG + +W A Q E V YVR G +K +Q+ + ++R
Sbjct: 92 YGYRITDGTGLVVVRQWMDADHQEEPLPVQ-----CYVRASGTVKVWQNAPIVTG-TVRL 145
Query: 144 IIDFNEITSHFVECIYVQLYNTR 166
+ D NE+ H+++ I L TR
Sbjct: 146 VSDCNELNYHYLDVILTHLRLTR 168
>gi|72389098|ref|XP_844844.1| replication Factor A 28 kDa subunit [Trypanosoma brucei TREU927]
gi|62358669|gb|AAX79127.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei]
gi|70801378|gb|AAZ11285.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 255
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQ-DKEPQFI 87
S++ ++ R V + P+T+KQL E E IDG +V TVVG V + D + +F
Sbjct: 16 SNAATQQRRVHPIRPVTIKQLLEAQRVGEGVTVIDGREVTQATVVGRVVGYENDSDNRFS 75
Query: 88 ----------FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLN 137
+ I DGTG + +W + + + YVR G +K +Q+ +
Sbjct: 76 GGALTAKHHGYRITDGTGVVVVRQWMDADQQDDP---LPLQCYVRAAGTVKMWQNSPIVT 132
Query: 138 AYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS 171
++R + D NE+ HF++ I L RL GS
Sbjct: 133 G-TVRLVSDCNELNYHFLDVILTHL---RLTQGS 162
>gi|195053087|ref|XP_001993462.1| GH13058 [Drosophila grimshawi]
gi|193900521|gb|EDV99387.1| GH13058 [Drosophila grimshawi]
Length = 240
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
+ VGIV +++ + + I+D +GRI+ W E + + YV++YG +++
Sbjct: 53 VCAVGIVRNIETSSTKITYSIEDHSGRIDAHYWLEEGDAIKSPD-VMLNNYVKIYGSVRS 111
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIY----VQLYNTRLRGGSSNQ--PQMTNSNHL 183
++ L + L ++D NE+ +H +E ++ + YN + GG SNQ P +T S
Sbjct: 112 QAGQKVLMVFKLLNVLDPNEVCTHVLEALHSRYKAEEYNHKGDGGPSNQLMPNVTAS--- 168
Query: 184 KEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQL-NLPMDKLMEAL 242
+ NAI + +D L + + + G+HR +S + ++ ++ L
Sbjct: 169 -QSNAIVA---------GLDSKQLAVFQAIKSNCSEEGIHRRELSAKFSHISQSEMTNIL 218
Query: 243 E-SLNENSLVYSIDEFHY 259
+ ++E + SID H+
Sbjct: 219 DFMISEGHIYSSIDPDHF 236
>gi|193890957|gb|ACF28632.1| replication protein [Amphidinium carterae]
Length = 264
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 34 KNRNVRTLLPMTVKQLSELSSNDESSAS---IDGADVNTITVVGIVCDMQDKEPQFIFLI 90
+ V T +P T++ E + S A + G +V + +VG+V D+ + F +
Sbjct: 9 RQEEVETCMPATIRIAQEAAMGPLSEAKNVYVHGKEVGVLLLVGMVEDIAKQGSSMEFSV 68
Query: 91 DDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEI 150
+DGTGR++ + ++ +E+ + G Y++ G ++A L+A L+ + ++E+
Sbjct: 69 NDGTGRMKVKYYVTSELP-SELASLQVGDYIKAVGSVRATPGVH-LSAVVLKKVASYDEV 126
Query: 151 TSHFVECIYVQL 162
+ H +E Y L
Sbjct: 127 SYHLIEVAYAAL 138
>gi|195476000|ref|XP_002090270.1| GE13014 [Drosophila yakuba]
gi|194176371|gb|EDW89982.1| GE13014 [Drosophila yakuba]
Length = 244
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S K + P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPSGAASSQKGEGIA---PLVVKQIVDAP---EGNIEMFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +GRI+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNIETSSTKITYALEDHSGRIDAHYWL-EEGDALKAPEVMINNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|157104136|ref|XP_001648269.1| insect replication protein a [Aedes aegypti]
gi|108869254|gb|EAT33479.1| AAEL014250-PA [Aedes aegypti]
Length = 247
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 11 AFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTI 70
+F GGF + AT ++ +LP+T++Q+ E S ES + G + +
Sbjct: 4 SFGAGGF-SANAT-----GGGAAQENKAEGVLPLTIRQILESS---ESGVQLFGIHYSMV 54
Query: 71 TVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAF 130
T V IV + + + ++D TG+++ W E+ + N V + Y RV+G ++
Sbjct: 55 TFVAIVRSVDHSSTKITYGLEDHTGQVDAHLWL-EEGDTNSVPGMMTHSYARVFGSVRHQ 113
Query: 131 QDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+++ Y + + N++T+H +E + N R +G
Sbjct: 114 GGSKAVMIYKIEQVSSPNDVTTHLLEVL-----NARYKG 147
>gi|294885959|ref|XP_002771487.1| Replication protein A 32 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239875191|gb|EER03303.1| Replication protein A 32 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 319
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 15 GGF---MPSQATTVPDPSSSFSKNRNVRTLLPMT----VKQLSELSSNDESSASIDGADV 67
GGF PS + DPS+ R L+P+T + E+ E++ G +
Sbjct: 41 GGFGPVSPSTGRSKSDPSA-----RESMGLIPVTAAMVINAFKEMEVG-EANFKFHGKEA 94
Query: 68 NTITVVGIVCDMQDKEPQFI-FLIDDGTGRIECSRWAHEQ---MEFNEVNQISKGMYVRV 123
I +VG V D+Q + + + IDDGTG + +R+ M V+ I G YV V
Sbjct: 95 FMIEIVGAVIDVQRRADNGMEYTIDDGTGCVRATRFVESSLSAMTDAPVDDIRVGQYVSV 154
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNT 165
G L+ F + ++ A+ + PI + I H + + + T
Sbjct: 155 VGRLRRFSSENNITAHHIEPISTPDRIAHHMISVAHAMVMLT 196
>gi|448523340|ref|XP_003868878.1| Rfa2 DNA replication factor A [Candida orthopsilosis Co 90-125]
gi|380353218|emb|CCG25974.1| Rfa2 DNA replication factor A [Candida orthopsilosis]
Length = 289
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 36/264 (13%)
Query: 4 GEFDG---AAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESS 59
G F G A F+ GF +Q D +S +K + ++ P+T+KQ+ E +
Sbjct: 36 GNFGGDYNAGGFSNSGF--TQGGFSGDGNSQQNKVQTRNSIAPVTIKQILEAEQPVPDGE 93
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK-- 117
+ ++ + +G+V + ++DG+G I+ +W E N V Q +
Sbjct: 94 FKVHNVSISLVGFIGVVRKVHANGVTLFITVEDGSGSIDVRKWIDENN--NSVEQEKEKY 151
Query: 118 ----GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN 173
YV V G LK + + +S+ S+ I D N+I H + I L + +G + +
Sbjct: 152 MGFLNKYVFVGGALKVYNNNKSIQNASINLIEDSNQIIYHHLNAIDNHL---KCQGVTKS 208
Query: 174 QPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRR-----PEFLANNNGVHRNVIS 228
TN N ++ + DEG + D+ VL+F+R+ PE GV + I
Sbjct: 209 SGSTTNGND-------NNKLFVDDEGSATDR-VLNFIRQESKTMPE------GVPISYII 254
Query: 229 QQLNLPMDKLMEALESLNENSLVY 252
Q+L++ + + L E+ +Y
Sbjct: 255 QKLSITEKEGEKHCNDLVESGKIY 278
>gi|407420707|gb|EKF38640.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 322
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQD----------KEPQ 85
R + + P+T+KQL E E +DG +V TVVG V +D
Sbjct: 90 RRMHPIRPVTIKQLLEAQRVGEGVMVVDGREVTQATVVGRVIGYEDDTANRVTGALTAKH 149
Query: 86 FIFLIDDGTGRIECSRW--AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+ + I DGTG + +W A Q E V YVR G +K +Q+ + ++R
Sbjct: 150 YGYRITDGTGLVVVRQWMDADHQEEPLPVQ-----CYVRASGTVKVWQNAPIVTG-TVRL 203
Query: 144 IIDFNEITSHFVECIYVQLYNTR 166
+ D NE+ H+++ I L TR
Sbjct: 204 VSDCNELNYHYLDVILTHLRLTR 226
>gi|269860373|ref|XP_002649908.1| single-stranded DNA-binding replication protein A 30 kD subunit
[Enterocytozoon bieneusi H348]
gi|220066668|gb|EED44142.1| single-stranded DNA-binding replication protein A 30 kD subunit
[Enterocytozoon bieneusi H348]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 27 DPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQF 86
D S +N RTL MT+KQL +++ ID +V TI++VG V ++
Sbjct: 14 DASGIQERNIPKRTLRSMTIKQLFQITG-----GIIDNTNVTTISIVGFVRELTKTNTGL 68
Query: 87 IFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
F + D T I+ + W + + + ++ I +G V++ G L+ F DK+ + ++ ++D
Sbjct: 69 NFKLFDTTEIIDINFWPNGNYDESLIDSIHEGYIVKIIGTLRLFNDKKIV-VCNVFKVVD 127
Query: 147 FNEITSHFVECIY 159
N + H + Y
Sbjct: 128 GNYLIYHLINAAY 140
>gi|342180984|emb|CCC90461.1| putative replication Factor A 28 kDa subunit [Trypanosoma
congolense IL3000]
gi|343475586|emb|CCD13058.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 276
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 20 SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDM 79
S TT P+ S R + + P+T+KQL E IDG +V TVVG V
Sbjct: 29 SGGTTGPNASQ---PQRRMHPIRPVTIKQLLGAQRVGEGVTVIDGREVTQATVVGRVIGY 85
Query: 80 QD-------------KEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ-ISKGMYVRVYG 125
+D + I DGTG + +W M+ + ++ + + YVR G
Sbjct: 86 EDDGSSGNFAAGGALTAKHHGYRITDGTGIVVVRQW----MDAGQQDEPLPQQCYVRAAG 141
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR 166
+K +Q+ + ++R + D NE+ HF++ I L TR
Sbjct: 142 TVKMWQNAPIVTG-TVRLVSDCNELNYHFLDVILTHLRLTR 181
>gi|223967031|emb|CAR93252.1| CG9273-PA [Drosophila melanogaster]
Length = 246
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 35 NRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGT 94
N+ ++P+ VKQ+ + E + + G VV IV +++ + + ++D +
Sbjct: 21 NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVAIVRNVETSSTKITYTLEDHS 77
Query: 95 GRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
GRI+ W E+ + + ++ YV+VYG ++ ++L + L P++D NE+ +H
Sbjct: 78 GRIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLDPNEVCTHL 136
Query: 155 VECIYVQLYNTRLRG 169
+E + N R R
Sbjct: 137 LEVL-----NARYRA 146
>gi|403417909|emb|CCM04609.1| predicted protein [Fibroporia radiculosa]
Length = 361
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 40 TLLPMTVKQLSELS-SNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGT--GR 96
+ P+T++QL E ++D + IDG DV+ + VV + D++ + I ++DGT G+
Sbjct: 26 AIRPVTIRQLLEAQRAHDTAPFEIDGIDVDQVVVVAHLRDLRQTSTKLILRLEDGTSKGQ 85
Query: 97 IECSRW---AHEQMEFNEVNQISKGMYVRVYGHLKAFQ------DKRSLNAYSLRPIIDF 147
I +W H+ E + +Q YVRV G L F+ K L L + D
Sbjct: 86 ITAHQWLSNVHQVFEESRPDQ----TYVRVVGRLSRFRGSQAQVGKNELRVIHLHEVTDP 141
Query: 148 NEITSHFVECIYV 160
+E H +E V
Sbjct: 142 HEPLFHILEAFMV 154
>gi|328716608|ref|XP_003245992.1| PREDICTED: replication factor A protein 2-like [Acyrthosiphon
pisum]
Length = 244
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF T P+++ T++ + +++L SN+E+ + + VVG
Sbjct: 7 GGF---NVTMTQSPTTASGVEPKQNTVISVAIREL--FDSNEENKNT-------HVVVVG 54
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
I+ K+ + +F++ TGR+ C +W E E + ++ + Y +V G + DK
Sbjct: 55 II-----KQVKPLFILXXXTGRLLCIQWGDEN-ELSRYPKLIENAYFKVVGSKRMQNDKV 108
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNH 182
+L +S+RP+ NE+T H + I + + S Q Q T +N
Sbjct: 109 TLLCHSVRPLETLNELTHHLLSIIALPYITEEINVASGTQ-QSTATNQ 155
>gi|403352426|gb|EJY75728.1| hypothetical protein OXYTRI_02881 [Oxytricha trifallax]
Length = 515
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW----------AHEQMEF-NEVNQI 115
+N I + GI+ + +E ++IF IDD TG + C W A +F N I
Sbjct: 169 LNKIQICGIMVFIIKREEKYIFGIDDSTGVMTCVLWLNDNKQGGQSARRNQDFRNLFANI 228
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQ 161
+ G + + G ++ ++DK +N + LRP+ID NE + + I Q
Sbjct: 229 TIGSSLAILGTMEYYKDKIQVNVHKLRPVIDINEEMLQYQQTINAQ 274
>gi|340053618|emb|CCC47911.1| putative replication Factor A 28 kDa subunit [Trypanosoma vivax
Y486]
Length = 260
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 1 MYSGEFDGAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
+++ F GAA GG P+ P R + + P+T+KQL E +
Sbjct: 3 LHASGFFGAA---GGHIAPNSGNVTSQP------QRRMHPIRPVTIKQLLEAQRVGDGVT 53
Query: 61 SIDGADVNTITVVGIVCDMQD----------KEPQFIFLIDDGTGRIECSRWA-HEQMEF 109
ID +V TVVG V +D + I DGTG + +W +Q E
Sbjct: 54 VIDEREVTQATVVGRVVGYEDGGSAVGGGALTAKHHGYRITDGTGFVVVRQWMDSDQQE- 112
Query: 110 NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+ YVR G +K +Q+ + ++R + D NE+ HF++ I L TR
Sbjct: 113 ---EPLPLQCYVRAAGTVKMWQNAPIVTG-TVRLVSDNNELNYHFLDVILTHLRLTRGDK 168
Query: 170 GSSNQPQMTNSN 181
S+ +T SN
Sbjct: 169 KPSSSAGLTVSN 180
>gi|209882741|ref|XP_002142806.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558412|gb|EEA08457.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 351
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 44 MTVKQLSELSSNDESSASIDGADVNTITVVGIV-CDMQDKEPQFI-FLIDDGTGRIECSR 101
M +K S +N S + ++N +VG V C ++ PQ + F +DDG+G I
Sbjct: 56 MILKSYSGFITN--SRLQLLNREINLFKLVGFVRCAEHEEYPQRVRFYLDDGSGLILID- 112
Query: 102 WAHEQMEFNE----VNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH---- 153
W + N +N I++G +V+VYG L + S+ A+ +RP++ +EI++H
Sbjct: 113 WLIDNTGTNYKQELINSITEGCFVKVYGELTLMVSEPSVRAFVVRPLVCTDEISAHDIDV 172
Query: 154 ---FVECIY 159
V C+Y
Sbjct: 173 AVFIVRCLY 181
>gi|116811987|emb|CAL26160.1| CG9273 [Drosophila melanogaster]
Length = 246
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
G F +Q T P ++S N+ ++P+ VKQ+ + E + + G VV
Sbjct: 6 GDFNATQ--TAPTGAAS---NQKGEGIVPLVVKQIVDAP---EGNIELFGMQYAMACVVA 57
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
IV +++ + + ++D +G I+ W E+ + + ++ YV+VYG ++ +
Sbjct: 58 IVRNVETSSTKITYTLEDHSGSIDAHYWL-EEGDALKAPEVMVNNYVKVYGTTRSQGGSK 116
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG 169
+L + L P++D NE+ +H +E + N R R
Sbjct: 117 TLMIFKLLPVLDPNEVCTHLLEVL-----NARYRA 146
>gi|393238287|gb|EJD45825.1| hypothetical protein AURDEDRAFT_137173 [Auricularia delicata
TFB-10046 SS5]
Length = 231
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 27/161 (16%)
Query: 8 GAAAFAGGGFM-PSQATTVPDPSSSFSKN-----RNVRTLLPMTVKQLSELSSNDESSAS 61
G+ GGGF+ PS+ DPS K R V +PMT + S++ +
Sbjct: 14 GSGMSQGGGFVSPSKGA---DPSGGPKKPTAPPVRPVTIRMPMTAE-----STHLDGGFK 65
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYV 121
IDG + ++ G V + E + +D+ ++ E ++ G YV
Sbjct: 66 IDGEKLESVRG-GAVARERGGEMETRCQVDN------------QEANMPEDEEVVDGGYV 112
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
RV G LK F KRSL+ +LR ++D +EI +H ++ I L
Sbjct: 113 RVIGKLKEFSGKRSLHGSTLRLVVDHHEIYAHTLDVIATYL 153
>gi|403357173|gb|EJY78206.1| hypothetical protein OXYTRI_24641 [Oxytricha trifallax]
Length = 285
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
R R P+T+K L++ + + + IDG + I +VG + ++ + F ++D TG
Sbjct: 47 RKKRLFTPVTIKMLTDAALGPDDTCEIDGEMIQDIIIVGRIIARTEESMRIQFEVNDSTG 106
Query: 96 RIECSRW---------AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+ + A + E+ + MY +++G ++A+++++ + ++ +
Sbjct: 107 TFKIIFYKKDANMIPTALKNFEYTQF------MYAKIFGTIRAYKEEKGIVGTHIKKVEK 160
Query: 147 FNEITSHFVECIYVQLYNTRLRGGSSNQ 174
F E+T+H ++ RL+G S Q
Sbjct: 161 FEEMTNHLLQVFVAN--QMRLKGVLSQQ 186
>gi|354548121|emb|CCE44857.1| hypothetical protein CPAR2_406600 [Candida parapsilosis]
Length = 256
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 27 DPSSSFSKNRNVRTLLPMTVKQLSELSSN-DESSASIDGADVNTITVVGIVCDMQDKEPQ 85
D +S +K + ++ P+T+KQ+ E + + ++ + +G+V +
Sbjct: 27 DGNSQQNKVQTRNSINPVTIKQILEAEQPVPDGEFKVHNVSISLVGFIGVVRKVHANGVT 86
Query: 86 FIFLIDDGTGRIECSRWAHEQM----EFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
++DGTG I+ +W E + E E + YV V G LK + +S+ S+
Sbjct: 87 LFITVEDGTGSIDVRKWVDENINSVEEEKERYMVFLNKYVFVGGALKVYNGNKSIQNASV 146
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKS 201
I D N+I H + I L + + S + + N L + DEG +
Sbjct: 147 SLIEDSNQIIYHHLSAIDNHLKSQGVTKSSGSAVNGSQGNKL----------FVDDEGST 196
Query: 202 IDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY 252
D+ VL+F+R+ E GV + I+Q+L++ + + L E+ +Y
Sbjct: 197 TDR-VLNFIRQ-ESKTMPEGVPISFITQKLSISEKEGEKHCNDLVESGKIY 245
>gi|403308386|ref|XP_003945231.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 32 kDa
subunit [Saimiri boliviensis boliviensis]
Length = 259
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 36/205 (17%)
Query: 1 MYSGEFD--GAAAFAG-GGFMPSQAT-TVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSN 55
M++ F+ G++ + G GG+ S P PS + K+R + ++P T+ QL +
Sbjct: 74 MWNSGFESYGSSNYGGAGGYTQSPGGFGSPGPSQAEKKSRARAQHIVPCTISQLLSATLV 133
Query: 56 DESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI 115
DE I +++ +T+VGI+ + ++ IDD T
Sbjct: 134 DEV-FRIGNVEISQVTIVGIIRHTEKAPTNIVYKIDDMT--------------------- 171
Query: 116 SKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQP 175
+ M VR + +K+SL A+ + P+ D NE T+H +E I + L GSS P
Sbjct: 172 APPMDVRQWVDTDVKTNKKSLVAFKIMPLEDMNEFTAHILEVINAHMI---LSKGSSQFP 228
Query: 176 QMTN------SNHLKEYNAISSNHY 194
++ SN Y+ + +H+
Sbjct: 229 ILSRQAVDFLSNEGHIYSTVDDDHF 253
>gi|282400156|ref|NP_001164201.1| replication protein A2 [Tribolium castaneum]
gi|270012721|gb|EFA09169.1| hypothetical protein TcasGA2_TC005650 [Tribolium castaneum]
Length = 254
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 36 RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG 95
R +++++P+ + + E + + ++ G V+ VVG++ D + + + I+D +
Sbjct: 32 RRMQSVVPLFISHILECT---DEEFNLYGMPVHFADVVGVLKDFEVQTTKATCTIEDHSA 88
Query: 96 RIECSRWAHEQME-FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
I+ W + + + + YVRV+G ++ ++ + + P+ D N +T+H
Sbjct: 89 SIKAIMWLETDNDTVTALPPVKENCYVRVFGSVRTQDGEKMIMILKILPVDDLNIVTNHL 148
Query: 155 VECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPE 214
+E I +LY RL G ++ + +A ++N K + +++ L+
Sbjct: 149 LEIIQAKLYAERLADGRLPAANLSTTVATTSTSAAANNSSGL---KPMQVKIINLLKP-- 203
Query: 215 FLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKS 261
+ + G+ R+ I Q + AL+ L + VY ++D HYK+
Sbjct: 204 -IKSRTGLSRSEIMQHFGAQAREAEVALDFLLDEGHVYTTVDTDHYKA 250
>gi|167380559|ref|XP_001735369.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902679|gb|EDR28436.1| hypothetical protein EDI_350300 [Entamoeba dispar SAW760]
Length = 149
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 34 KNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDG 93
+N+NV + P+T SN++ + +NT+ V G + + + + I+D
Sbjct: 24 ENKNV--VFPLTALSFIHTESNNKKQFTYKQVVLNTVVVCGRITSIDIQNDVKRYTINDS 81
Query: 94 TGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
TG + + + E N I G Y++ G +K F + + A L ++D N + +H
Sbjct: 82 TGSVVVGVYQTDSTEEN----IEVGQYIKCVGKIKKFSQETYILASRLPLVVDVNHMMTH 137
Query: 154 FVECIY 159
+EC Y
Sbjct: 138 LIECAY 143
>gi|123482304|ref|XP_001323747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121906618|gb|EAY11524.1| hypothetical protein TVAG_005990 [Trichomonas vaginalis G3]
Length = 242
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Query: 38 VRT---LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQF-IFLIDDG 93
VRT ++P+T+KQ+ D ++ I+G I ++G + ++++ ++++D
Sbjct: 21 VRTNVNIIPVTIKQILNAEVKD-NAFMINGVQAKVIRIIGKILSHEEQDATTDKYVLNDC 79
Query: 94 TGRIECSRWAHEQMEFNEVNQ-ISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITS 152
+G IE A E ++ + V + YV + G LK D +SL+ S+ D+N IT
Sbjct: 80 SGTIE----AFESVDPSNVREPFEDNRYVAITGMLKFENDSKSLSIESIEYADDYNRITY 135
Query: 153 HFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEY--NAISSNHYSFDEGKSIDQMVLDFL 210
H ++ I+ LY T+ G Q + + + + Y N ++ + EG IDQ +L +
Sbjct: 136 HALDTIHAHLYFTK---GGFPQNTIYTAQNREPYQPNTAHADTKAASEG-DIDQGILSCM 191
Query: 211 RRPEFLANNNGVHRNVISQQL--NLPMDKLMEALESLNENSLVYSIDEFHYKSA 262
+ V ++ I L + ++ + LNE+ L+Y DE Y A
Sbjct: 192 KSH---GEGAQVTKSEIISALKDKFSVVQIEGRISKLNEDGLIYQADEDTYSIA 242
>gi|332025139|gb|EGI65319.1| Replication protein A 32 kDa subunit [Acromyrmex echinatior]
Length = 237
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 6 FDGAAAFAGGGFM--PSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASID 63
++ ++ GGFM +Q T + +N +T++P+ +K ++ + + I
Sbjct: 2 WNNESSMGEGGFMNDSTQGT-----GTGKKGPQNDKTIVPVLIKHITSTTGD----LQIA 52
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRV 123
G VN +++VGIV ++ + F I D TG + + + +N +++ K + +
Sbjct: 53 GRTVNVLSIVGIVRHIEQDTTKISFNIQDDTG-VLFMFFNLTIIMYNYNDKMQK--ILTI 109
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
YG ++ ++R + + P+ D N++T HF+E +YV L
Sbjct: 110 YGLIRTQNNQRHVLILRMYPLEDLNDLTCHFMEVMYVIL 148
>gi|67467186|ref|XP_649713.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56466205|gb|EAL44327.1| hypothetical protein EHI_147000 [Entamoeba histolytica HM-1:IMSS]
gi|407042005|gb|EKE41068.1| OB-fold nucleic acid binding domain containing protein [Entamoeba
nuttalli P19]
gi|449701972|gb|EMD42689.1| OBfold nucleic acid binding domain containing protein [Entamoeba
histolytica KU27]
Length = 149
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIF 88
SS N + P+T SN++ + +NT+ V G + ++ + +
Sbjct: 17 SSPRKNTENKSVVFPLTALSFIHTESNNKKQFTYKQVVLNTVVVCGRITNIDIQNDVKRY 76
Query: 89 LIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFN 148
I+D TG + + + E N I G Y++ G +K F + + A L ++D N
Sbjct: 77 TINDSTGSVVVGVYQIDSTEEN----IEVGQYIKCVGKIKKFSQETYILASRLPLVVDVN 132
Query: 149 EITSHFVECIY 159
+ +H +EC Y
Sbjct: 133 HMMTHLIECAY 143
>gi|321472834|gb|EFX83803.1| hypothetical protein DAPPUDRAFT_239719 [Daphnia pulex]
Length = 208
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVN-QISKGMY 120
++ ++ IT+VG + ++ K ++I D TG IE W + N + S GM+
Sbjct: 19 VEDSEAKLITLVGTIEKIESKINCISYMIRDDTGEIEVLLWVDIGSAIDSHNTKFSNGMF 78
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGG-SSNQPQMTN 179
RV G K L A ++ + NEIT+H +E ++++ +L+ +SN Q+
Sbjct: 79 CRVVGSPKVTDGITHLIALNISKLSSANEITTHLLETQWIRMKLRQLKNNKASNDSQLPK 138
Query: 180 SNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLN--LPMDK 237
S D + Q ++ + + E N+ G+ + V+ ++++ LP +
Sbjct: 139 S----------------DITLAPQQRLIYTIVKAE--TNDIGIEKAVVVERVHGELPQRE 180
Query: 238 LMEALESLNENSLVY-SIDEFHYKSAV 263
+ L+ L L++ ++D H+K+ +
Sbjct: 181 VDNILDYLCTEGLIFNTVDVDHFKATI 207
>gi|195118913|ref|XP_002003976.1| GI18202 [Drosophila mojavensis]
gi|193914551|gb|EDW13418.1| GI18202 [Drosophila mojavensis]
Length = 242
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
+ VVGIV +++ + + ++D +GRI+ W E+ + + + YV++YG ++
Sbjct: 53 VCVVGIVRNVETSSTKITYTLEDHSGRIDAHYWL-EEGDAIKAPDVMINNYVKIYGSVRP 111
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIY--VQLYNTRLRGGSSNQP 175
++ L + L ++D NE+ +H +E ++ + ++G SS+ P
Sbjct: 112 QAGQKVLMVFKLINVLDPNEVCTHVLEALHSRYKAEEYHVKGNSSHAP 159
>gi|343957967|emb|CCA30600.1| replication factor A protein 2 homolog, partial [Glomus diaphanum]
Length = 164
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 30/146 (20%)
Query: 88 FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
+++DDGTG I+ W H+ E VN K+ + + + PI+D
Sbjct: 10 YVVDDGTGFIDVKVW-HDDSEETNVN-------------------KKLILPHVVHPIVDH 49
Query: 148 NEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVL 207
NEI+ H + I LY T++ SN QMT+++ EY + SS+ + + + + +
Sbjct: 50 NEISYHMADVIRAHLYLTKVLNNQSNN-QMTSTSSTYEYQSRSSSGHG---NQQLHKDIF 105
Query: 208 DFLRRPEFLANNNGVHRNV--ISQQL 231
D + + NN + NV I+QQL
Sbjct: 106 DLISK----QNNTQIGANVDEIAQQL 127
>gi|344244081|gb|EGW00185.1| Replication protein A 30 kDa subunit [Cricetulus griseus]
Length = 333
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 8 GAAAFAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADV 67
G+ AGG + TT+ P + +++P + QL D + I G +
Sbjct: 90 GSDEQAGGQDLGLPMTTLTRP--------GIHSIVPCCISQLLTAVEVD-NVFKIRGFAL 140
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGH 126
+ +++VG++ + + ++ IDD T + IE + + V + G+Y +V G
Sbjct: 141 HRVSIVGMIMEAKKASRYMMYKIDDMTAKAIEARQPLSRERVRQCVIPLPVGVYAKVLGV 200
Query: 127 LKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSN 173
L++ + R L S+R + D NE+++H +E + + + R G S
Sbjct: 201 LQSSEGTRRLGVLSIRVLEDMNELSTHTLEVVNAHMMLDQSREGVST 247
>gi|390986565|gb|AFM35802.1| hypothetical protein, partial [Oryza eichingeri]
Length = 87
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 35 NRNVRTLLPMTVKQLSELSSNDESSAS-----IDGADVNTITVVGIVCDMQDKEPQFIFL 89
+R + +P+TVKQ+SE + + +DG + + +VG+V ++ F
Sbjct: 1 SRGASSTMPLTVKQISEAQQSGTTGEKGAPFVVDGVETANVRLVGLVSGKTERNTDVSFT 60
Query: 90 IDDGTGRIECSRWAHEQMEFNE 111
IDDGTGR++ RW ++ + E
Sbjct: 61 IDDGTGRLDFIRWVNDAADSAE 82
>gi|148698144|gb|EDL30091.1| replication protein A2, isoform CRA_b [Mus musculus]
Length = 152
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 3 SGEFDGAAAF--AGGGFMPSQATTVPDPSSSFSKNR-NVRTLLPMTVKQLSELSSNDESS 59
S + GA + + GGF P PS + K+R + ++P T+ QL + DE
Sbjct: 11 SSTYGGAGGYTQSPGGF------GSPTPSQAEKKSRVRAQHIVPCTISQLLSATLTDEV- 63
Query: 60 ASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG-RIECSRWAHEQMEFNEVNQISKG 118
I +++ +T+VGI+ + ++ IDD T ++ +W E +
Sbjct: 64 FRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVVPPE 123
Query: 119 MYVRVYGHLKAFQDK 133
YV+V GHL++FQ K
Sbjct: 124 TYVKVAGHLRSFQVK 138
>gi|168016881|ref|XP_001760977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687986|gb|EDQ74366.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 19/114 (16%)
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW------------------AHE 105
G V + V+GIV + KE F +DDGTG + C W + +
Sbjct: 1 GRSVRQVEVMGIVVTVDRKERYLRFTLDDGTGCVPCIFWTNYASFPATSPAKGLELRSRQ 60
Query: 106 QMEF-NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+M Q+ G +RV G L + ++ + SLR D N H+VEC+
Sbjct: 61 EMAIATTAKQVKLGDLLRVQGRLNTYTNQIQVTVASLRTEKDPNAEVLHWVECM 114
>gi|312381550|gb|EFR27277.1| hypothetical protein AND_06147 [Anopheles darlingi]
Length = 330
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVV 73
GGGF TT + + SK V LPM V+Q+ E + ++ S+ G IT+V
Sbjct: 117 GGGFN----TTTAGGAEAESKAEGV---LPMVVRQIKE---SPDAGISMFGNQYTMITLV 166
Query: 74 GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDK 133
I+ ++ + ++D TGRI W E N I Y RV G ++ +
Sbjct: 167 AIIRSVEYSSTNVTYQLEDHTGRINAHFWLDEG-NANSTPSIVPRSYARVVGSVRNQEGT 225
Query: 134 RSLNAYSLRPIIDFNEITSHFVECIYVQ 161
+ + + + + N+ T+H +E ++ +
Sbjct: 226 KVIMIFKIDQVNSPNDYTTHLLEVLHAR 253
>gi|440299316|gb|ELP91884.1| hypothetical protein EIN_398140 [Entamoeba invadens IP1]
Length = 146
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVG 74
GGF+PS S K + P+T + ++N++ + + + V G
Sbjct: 8 GGFIPS---------SPAKKQPAKNVVFPLTCLEFLNTTTNNKKEFLYENNILTNVVVCG 58
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISK-GMYVRVYGHLKAFQDK 133
V + + + +LIDD TGRIE + ++ F+ I++ G Y+ G +K F
Sbjct: 59 EVVEAKTENEIAKYLIDDSTGRIEVGIYGEDEPTFSAKPLINRVGDYIITSGKIKKFSSS 118
Query: 134 RSLNAYSLRPII-DFNEITSHFVECIY 159
+ +S R I D + + H +EC Y
Sbjct: 119 NYV--HSQRTIKSDLDHMMLHLIECAY 143
>gi|119587398|gb|EAW66994.1| hCG2042180 [Homo sapiens]
Length = 128
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 62 IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMY 120
I A+++ IT+VGI+ + ++ IDD T + +W +E + Y
Sbjct: 41 IGNAEISQITLVGIIRHAEKTSTNIVYKIDDMTAAPMNVHQWVDTDDTSSENTVVPPETY 100
Query: 121 VRVYGHLKAFQDKRSLNAY 139
V+V GHL++FQ+K+SL A+
Sbjct: 101 VKVAGHLRSFQNKKSLVAF 119
>gi|403221612|dbj|BAM39744.1| uncharacterized protein TOT_020000017 [Theileria orientalis strain
Shintoku]
Length = 314
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 39 RTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+T +P+ + + SS +I G ++ I +VG + D + E F+IDDGTG I+
Sbjct: 54 KTFMPLKINMIYSSWKTGGSSINILGYQLDIIKLVGRIVDAKTTEQDTTFVIDDGTGSID 113
Query: 99 CSRWAHEQM---EFNEVNQISKGM-YVRVYGHLKAF--QDKRSLNAYSLRPIIDFNEITS 152
C M + N VN + K V+VYG ++ YS++ + E
Sbjct: 114 CIHLFPGDMTEWKTNYVNNLMKTKSQVKVYGGFNPLYSSSNPTIIIYSIKELSSPEESKL 173
Query: 153 HFVECIYVQLYN 164
H ++ IY L N
Sbjct: 174 HDLDVIYSILSN 185
>gi|283135230|ref|NP_001164370.1| replication protein A2 [Nasonia vitripennis]
Length = 253
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 30/268 (11%)
Query: 6 FDGAAAFAGGGFMPSQATTVPDPSSSFSKN--RNVRTLLPMTVKQLSELSSNDESSASID 63
FD + A GGFM TTV D ++ K + + +P+ + L ++
Sbjct: 6 FDNSTA-GEGGFM---NTTVNDSTAGEDKANLKRGQNCVPVMIAHLVRYGE----KLTVW 57
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRV 123
G V +T VG+V ++ + F D TG I +W E N + + Y RV
Sbjct: 58 GTPVRLVTFVGLVRKVEPTSTKVSFEFSDDTGNISGLKWL-EGDSANYESPVKVNSYARV 116
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHL 183
+G ++ + + +++P+ E+ SH +E + L G S ++ N++H
Sbjct: 117 HGMIRDQGEDHYVLIVNIQPMDHLMELLSHHMEVTLMSLQ------GDSMVNKVANNDHS 170
Query: 184 KEYNAI---SSNHYSFDEG-KSIDQMVLDFLRR--PEFLANNNGVHRNVISQQL--NLPM 235
++ S N+ + + G QMVLD + PEF G R+ I + N+P
Sbjct: 171 MGNQSVQNGSVNNSNANSGLNRQQQMVLDIIENSDPEF-----GAERDQIKSAVAPNVPP 225
Query: 236 DKLMEALESLNENSLVYSIDEFHYKSAV 263
+ E LE L +Y+ Y A+
Sbjct: 226 QMVDEILEFLFAEGHIYTTKTDDYFKAI 253
>gi|387593702|gb|EIJ88726.1| hypothetical protein NEQG_01416 [Nematocida parisii ERTm3]
gi|387597362|gb|EIJ94982.1| hypothetical protein NEPG_00507 [Nematocida parisii ERTm1]
Length = 232
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 32 FSKNRNVRTLLPMTVKQLSELSSNDESS--ASIDGADVNTITVVGIVCDMQDK-EPQFIF 88
S+ R + + M++K ++++ ++ES G V+ + ++G + D F
Sbjct: 6 ISEARGSQFIRRMSIKHVNQVEFDEESKQNTQFRGQGVSLVELMGWITFENDSVHGGKKF 65
Query: 89 LIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFN 148
+ DGTG I C W + + + I KG Y+R+ G L + S+N PI D N
Sbjct: 66 TLSDGTGSISCLLWDEK-----DSSHIKKGAYIRIVGSLSKHEQNISINCTITTPITDGN 120
Query: 149 EITSHFV 155
+ H +
Sbjct: 121 SVMYHLL 127
>gi|66358822|ref|XP_626589.1| RP-A, OB fold single strand binding protein [Cryptosporidium parvum
Iowa II]
gi|46227708|gb|EAK88628.1| RP-A, OB fold single strand binding protein [Cryptosporidium parvum
Iowa II]
Length = 362
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 66 DVNTITVVGIVCDMQ-DKEPQFI-FLIDDGTGRIECSRW----AHEQMEFNEVNQISKGM 119
D+N +VG V +++ D PQ + F +DDG+G I W + + + VN I +G
Sbjct: 76 DINLFKLVGFVRNVEHDDYPQRLRFYLDDGSGLILID-WLVDNTGTKYKQDLVNSIHEGC 134
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS---SNQPQ 176
+V+++G L + S+ A+ +RP++ +EI+ H ++ V Y R G+ S + Q
Sbjct: 135 FVKIFGELTLMVSEPSVRAFVVRPLVCTDEISLHDID---VASYIVRSMYGNTYDSGKVQ 191
Query: 177 MTNSN 181
+++SN
Sbjct: 192 LSDSN 196
>gi|67590598|ref|XP_665492.1| replication protein A2; CpRPA2 [Cryptosporidium hominis TU502]
gi|54656206|gb|EAL35260.1| replication protein A2; CpRPA2 [Cryptosporidium hominis]
Length = 362
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 66 DVNTITVVGIVCDMQ-DKEPQFI-FLIDDGTGRIECSRW----AHEQMEFNEVNQISKGM 119
D+N +VG V +++ D PQ + F +DDG+G I W + + + VN I +G
Sbjct: 76 DINLFKLVGFVRNVEHDDYPQRLRFYLDDGSGLILID-WLVDNTGTKYKQDLVNSIHEGC 134
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVEC 157
+V+++G L + S+ A+ +RP++ +EI+ H ++
Sbjct: 135 FVKIFGELTLMVSEPSVRAFVVRPLVCTDEISLHDIDV 172
>gi|32395677|gb|AAP37459.1| replication protein A2 [Cryptosporidium parvum]
Length = 362
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 66 DVNTITVVGIVCDMQ-DKEPQFI-FLIDDGTGRIECSRW----AHEQMEFNEVNQISKGM 119
D+N +VG V +++ D PQ + F +DDG+G I W + + + VN I +G
Sbjct: 76 DINLFKLVGFVRNVEHDDYPQRLRFYLDDGSGLILID-WLVDNTGTKYKQDLVNSIHEGC 134
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGS---SNQPQ 176
+V+++G L + S+ A+ +RP++ +EI+ H ++ V Y R G+ S + Q
Sbjct: 135 FVKIFGELTLMVSEPSVRAFVVRPLVCTDEISLHDID---VASYIVRSMYGNTYDSGKVQ 191
Query: 177 MTNSN 181
+++SN
Sbjct: 192 LSDSN 196
>gi|409045864|gb|EKM55344.1| hypothetical protein PHACADRAFT_195372 [Phanerochaete carnosa
HHB-10118-sp]
Length = 422
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 18/150 (12%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSE----LSSNDESSASIDGADVNTITVVGIVC--DMQDK 82
S++ SK+ ++ TL P+T++Q+ E S ND IDG ++ I VV V + +
Sbjct: 22 SNASSKSASLPTLRPVTLRQVLEAKRPWSGNDTVPWYIDGQQIHHILVVASVVAEGFRPE 81
Query: 83 EPQFIFLIDDGTGR--IECSRWAHEQMEFNEVNQ----ISKGMYVRVYGHLKAFQDK--- 133
+ ++DGT R + R+ + + + + Q + K +YVRV GHL F D+
Sbjct: 82 SRTAWYRLEDGTNRRTVTVLRYIEDPNDAHILPQGQGFVPKNVYVRVMGHL--FADRGGG 139
Query: 134 -RSLNAYSLRPIIDFNEITSHFVECIYVQL 162
S+ A + + D +E H + +YV +
Sbjct: 140 SPSIRADAFHVVQDPHEPYVHVLRVMYVHM 169
>gi|403356006|gb|EJY77591.1| Replication protein A 30 kDa subunit [Oxytricha trifallax]
Length = 467
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 18 MPSQATTVPDPSSSFSKN-RNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIV 76
+PS P + +S+ + + +P+T+K + E + + DG + I V+G +
Sbjct: 138 IPSIKQKPPQSHAEYSQQVKKSKIFVPVTLKMVQECGARHDDVCEFDGDVICNIVVLGRL 197
Query: 77 CDMQDKEPQFIFLIDDGTGRIEC---SRWAHEQMEF-NEVNQISKGMYVRVYGHLKAFQD 132
+ + + F I+D T + EQ E ++N YV+++G ++ F+D
Sbjct: 198 IQKRTEPQRTQFEINDTTSSFRILFYHKSESEQPEMIRKLNAKPLQDYVKIFGQIQVFKD 257
Query: 133 KRSLNAYSLRPIIDFNEITSHFV 155
++++ +R + +EIT+HF+
Sbjct: 258 QKAIIGAFIRQVNSSDEITNHFL 280
>gi|440794453|gb|ELR15614.1| OBfold nucleic acid binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 201
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 52 LSSNDESSA-SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFN 110
LS D + +++G V + V+GI+ + + +DDGTGRI+C+ +A+ E
Sbjct: 73 LSEPDATEPFNLNGHPVTRVAVMGIIVEALPRPRHLALSVDDGTGRIQCAYYANSVDEGG 132
Query: 111 -EVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+ + G + G L F+ +RS+ Y + D N T H ++ +
Sbjct: 133 VPYSDLQVGCLASIQGKLHHFRQQRSIAIYRIGIEEDPNAETQHMLDVV 181
>gi|119600787|gb|EAW80381.1| hCG1811392 [Homo sapiens]
Length = 140
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 95 GRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHF 154
G + S+W +E I YV V G L+ QDK+SL + + P+ D NE T H
Sbjct: 28 GLLTPSQWVDTDDTSSENTVIPPEKYVIVAGDLRPLQDKKSLVPFKIMPLEDMNEFTVHI 87
Query: 155 VECIYVQL 162
+E I V +
Sbjct: 88 LEVINVHM 95
>gi|47026872|gb|AAT08661.1| single-stranded DNA-binding replication protein A [Hyacinthus
orientalis]
Length = 88
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 202 IDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVYS-IDEFHYK 260
I +MVLD + P LA+++GVH + + ++L LP K+ EA++ + +YS ID++H+K
Sbjct: 27 IYKMVLDVFQEPSSLASDHGVHVDEVVKRLGLPEKKIKEAIDYHVDTGHIYSTIDDYHFK 86
Query: 261 S 261
+
Sbjct: 87 A 87
>gi|289743139|gb|ADD20317.1| single-stranded DNA-binding replication protein A medium subunit
RPA 30kD [Glossina morsitans morsitans]
Length = 241
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 22 ATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQD 81
AT D +++ K+ + P+ +KQL + + E + + G + + + + IV +++
Sbjct: 11 ATQTTDGAAAEKKSEGIA---PVLIKQLLK---SAEGNFQMFGMNFSMVCLRAIVRNIET 64
Query: 82 KEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
+ + ++D TG+I W E+ + + + Y VYG +++ ++++ + +
Sbjct: 65 SSTKITYSLEDNTGQITAHYWL-EEGDTLKAPDVMLNKYATVYGSVRSQGGQKTIMVFKM 123
Query: 142 RPIIDFNEITSHFVECI 158
PI D NEI +H +E +
Sbjct: 124 LPINDPNEIVTHVLEVL 140
>gi|410911352|ref|XP_003969154.1| PREDICTED: replication protein A 32 kDa subunit-like [Takifugu
rubripes]
Length = 251
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIF 88
++ + R +LP+TV QL + I +++ ++VVG+V + +
Sbjct: 3 TAQATTKRATLQILPVTVSQLLSAPQVGHGAFVIGYLELHQVSVVGVVRRSAHYDTNVQY 62
Query: 89 LIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDF 147
+DD TG + +WA I G YV+V G L+ D++ L A ++R + +
Sbjct: 63 CVDDMTGPPLLVKQWA---------TPICPGTYVKVTGCLRGGSDQKVLLALNVRCLQEL 113
Query: 148 NEITSHFVECI--YVQLYN 164
NEITSH +E + ++QL+
Sbjct: 114 NEITSHMMEVVQAHMQLFG 132
>gi|71029898|ref|XP_764591.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351547|gb|EAN32308.1| hypothetical protein TP02_0022 [Theileria parva]
Length = 314
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 39 RTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+T +P+ + + S ++ G ++ I +VG V D ++ E F+IDDGTG IE
Sbjct: 54 KTFMPLKINMIYSSWKTGGVSINVFGYHLDIIKLVGYVKDAKETEQDTSFVIDDGTGTIE 113
Query: 99 C--------SRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRS--LNAYSLRPIIDFN 148
C S W + +E+ + V++YG S + YS++ +
Sbjct: 114 CIHLSPGDISDWKRSYI--SELTRTKSP--VKIYGGFNPLYSSSSPTIIIYSIKEVTSPE 169
Query: 149 EITSHFVECIYVQL 162
EI H ++ IY L
Sbjct: 170 EIKLHNLDVIYSVL 183
>gi|158296779|ref|XP_317127.3| AGAP008332-PA [Anopheles gambiae str. PEST]
gi|157014875|gb|EAA12428.4| AGAP008332-PA [Anopheles gambiae str. PEST]
Length = 247
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECS 100
+LP+ ++Q+ E S + S+ G IT+V I+ ++ + + ++D TGRI+
Sbjct: 28 VLPLVIEQVLESS---DGGISLFGHQYAMITLVAIIRNVDYSSTKVTYQLEDHTGRIDAH 84
Query: 101 RWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV 160
W E I Y RV G ++ +S+ + + I NE+T+H +E ++
Sbjct: 85 LWI-EDDGVTSTPSIVPQSYARVVGSVRNQGGSKSIMIFKIDQINSPNEVTTHLLEVLHA 143
Query: 161 Q 161
+
Sbjct: 144 R 144
>gi|149634570|ref|XP_001512243.1| PREDICTED: CST complex subunit STN1-like [Ornithorhynchus anatinus]
Length = 370
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 27/103 (26%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHE----------------- 105
+G + + ++G V M+++E FI+ +DD TG I C W +E
Sbjct: 49 NGHPIKQVDILGTVIGMKEREAFFIYGVDDSTGVINCICWKNERDSKTSPAGTQPCTVSG 108
Query: 106 ----------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNA 138
Q + Q+ G +R+ GH++ ++D+R + A
Sbjct: 109 PYLTTQLKKLQEVLRQKTQLEIGDIIRIRGHIRVYRDQREVQA 151
>gi|403370718|gb|EJY85227.1| hypothetical protein OXYTRI_16916 [Oxytricha trifallax]
Length = 385
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 39 RTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+ P+T+K + + + DG +N I +VG V ++ + F I+D T
Sbjct: 53 KVFTPVTLKMVQQSQPRPDDQCEYDGDTINDIIIVGRVLKRIEEPMRTQFEINDNT---- 108
Query: 99 CSRWAHEQMEFNEVNQISKGM---------YVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
C+ H NQ+ + Y ++YG+++ F++++++ ++ I F+E
Sbjct: 109 CT--FHVLFYHKGENQVPTALRNFNFEQFTYAKIYGNIRVFKEEKAIVGTHIKRIEKFDE 166
Query: 150 ITSHFV 155
+T+HF+
Sbjct: 167 VTNHFL 172
>gi|195385024|ref|XP_002051208.1| GJ14710 [Drosophila virilis]
gi|194147665|gb|EDW63363.1| GJ14710 [Drosophila virilis]
Length = 242
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKA 129
+ VGIV +++ + + ++D +GRI+ W E + + YV++YG +++
Sbjct: 53 VCAVGIVRNIETSSTKITYSLEDHSGRIDAHYWLEEGDAIKSPDVMINN-YVKIYGSVRS 111
Query: 130 FQDKRSLNAYSLRPIIDFNEITSHFVECIY--VQLYNTRLRGGSSNQPQ---MTNSNHLK 184
++ L + L ++D NE+ +H +E ++ + ++G +S MTN
Sbjct: 112 QAGQKVLMVFKLINVLDPNEVCTHILEALHSRYKAEEYHVKGDTSAAASNTLMTNVT-AT 170
Query: 185 EYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALES 244
+ NAI + +D L + + + G+HR ++LN + +A
Sbjct: 171 QSNAIVA---------GLDSKQLAVFQAIKSNCSEEGIHR----RELNAKFSHISQA--E 215
Query: 245 LNENSLVYSIDEFHYKSAVNA 265
+N N L + I E H S+++A
Sbjct: 216 MN-NILDFMISEGHIYSSIDA 235
>gi|299753378|ref|XP_002911865.1| hypothetical protein CC1G_13905 [Coprinopsis cinerea okayama7#130]
gi|298410273|gb|EFI28371.1| hypothetical protein CC1G_13905 [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 37 NVRTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEP----QFIFLIDD 92
+V + P+TV+ S + E +A I G V IV ++ D E Q ++ + D
Sbjct: 52 HVSSAQPVTVR-----SGDKEETAYILGK--KPFKHVDIVANIFDVEKASNGQIVYTLSD 104
Query: 93 GTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITS 152
TG+++ WA E F VN S YVRV G L+ + + S+ +R + + +E+
Sbjct: 105 ETGQVKARAWASEY--FRYVNPSSHLEYVRVTGELETYNKRNSIRIKQIRVLENPHEVYH 162
Query: 153 HFVECI-YVQ 161
H + + Y+Q
Sbjct: 163 HLLSILFYIQ 172
>gi|449547020|gb|EMD37988.1| hypothetical protein CERSUDRAFT_113110 [Ceriporiopsis subvermispora
B]
Length = 434
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 33 SKNRNVRTLLPMTVKQL-SELSSNDESSASIDGADV-NTITVVGIVCDMQDKEPQFIFL- 89
SK + +R P+T++Q S ++ E+ +IDG + + I VV + ++ +E + +
Sbjct: 35 SKEKWIR---PVTIRQAQSAQQAHREAKFAIDGVPIQHYIRVVAHLFKVEFREQRSALMK 91
Query: 90 IDDGTGRIECSRWAHEQMEFNEVNQISK---GMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+DDGT I A+E + Q+ K G YVRV G LK + L A S+ + D
Sbjct: 92 LDDGTSFIN----AYEVWRADTAYQVQKKYEGSYVRVVGVLKRLGNTTMLMAESVCRVED 147
Query: 147 FNEITSHFVECIYVQLYNTR 166
+E+ H +E IY L+ R
Sbjct: 148 PHEVYFHTLESIYATLHVKR 167
>gi|326431143|gb|EGD76713.1| hypothetical protein PTSG_12677 [Salpingoeca sp. ATCC 50818]
Length = 167
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFI-FLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYV 121
+G V + GIV ++ DK F+ + +DDGT + C W ++ E + + G +V
Sbjct: 62 NGRHVRLAMLAGIVTEV-DKGTHFVAYKVDDGTAEVPCIVWRRDESERHARFNLELGCHV 120
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+G + F+ KR L + + I E H+ E +
Sbjct: 121 LAWGAVTVFRGKRQLTTHGISEITAVEEAV-HWAEAM 156
>gi|431896048|gb|ELK05466.1| Replication protein A 32 kDa subunit [Pteropus alecto]
Length = 331
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 120 YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
YV++ GHL +FQ+ +SL A+ + P+ D NE T+H +E + +
Sbjct: 24 YVKMAGHLSSFQNNKSLIAFKIMPLEDMNEFTAHILEVVNAHM 66
>gi|403353556|gb|EJY76316.1| hypothetical protein OXYTRI_02177 [Oxytricha trifallax]
Length = 313
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/117 (18%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 42 LPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSR 101
+P+T KQL ++ + + ++G V I ++G ++ +F I+D T +
Sbjct: 62 IPVTCKQLRQMPVDMDDICLMNGDQVQEIVIIGRTMSCREDSMRFTLEINDSTEIFKVVF 121
Query: 102 WAHE--QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVE 156
+ + Q F + + +YV+++G ++ +++++++ ++ ++ +EIT+H ++
Sbjct: 122 FQKDPFQSPFPADFKFQENIYVKIFGTIRVYKEEKAIIGSYIKNLVKSDEITNHLLQ 178
>gi|403159168|ref|XP_003319819.2| hypothetical protein PGTG_01993 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166617|gb|EFP75400.2| hypothetical protein PGTG_01993 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 154
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 39 RTLLPMTVKQ-LSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRI 97
+ L P+T+KQ L +SN +S+ SI DV ++ G+V D+ + + DGTG I
Sbjct: 64 QALQPVTIKQVLDAEASNSDSAISIQDIDVTNVSFCGVVRDIVRNATNVLLQVGDGTGGI 123
Query: 98 ECSRW 102
E +W
Sbjct: 124 EARKW 128
>gi|399218729|emb|CCF75616.1| unnamed protein product [Babesia microti strain RI]
Length = 280
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 9 AAAFAGGGFMPSQATTVPDPSSSFSKNR----NVRTLLPMTVKQLSELSSNDESSASIDG 64
G GF+ + DP+ F K+ N +P+ + ++ +D I G
Sbjct: 25 GPGIEGSGFISN------DPNEDFDKSSLEPSNKINFMPLKIGMINSTWKSDSRYIQIFG 78
Query: 65 ADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSR-WAHEQMEF--NEVNQISKG-MY 120
V I +VG + ++Q + +LI+D TGRI C A E E+ ++ + G
Sbjct: 79 NQVEIIKIVGRIVNVQWTDQNNQYLIEDDTGRIMCILVRADEFSEYRTKQLKDLENGHKL 138
Query: 121 VRVYGHLKAFQDKR--SLNAYSLRPIIDFNEITSHFVECIYVQL 162
V++YG + ++ YS++ I +FNE H ++ ++ L
Sbjct: 139 VKIYGGYNPINSTQYPVISIYSIKCIQNFNESLLHDLDVMHTIL 182
>gi|223946827|gb|ACN27497.1| unknown [Zea mays]
gi|413955646|gb|AFW88295.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 165
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ----------------- 106
G V +VG+V +E FL+DDGTG + C W + Q
Sbjct: 34 GRRVARAELVGVVVSRDRREKFLRFLVDDGTGCVPCILWLNHQYLNARTSSGPSSDHDPT 93
Query: 107 --MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
M ++ G +RV G + +++ + + P D N H+++C+
Sbjct: 94 AEMALKMSEEVRLGTLLRVRGKIASYRGAIQITVRDVVPEKDPNSEVLHWLQCV 147
>gi|145345363|ref|XP_001417183.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577410|gb|ABO95476.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 137
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 19/99 (19%)
Query: 70 ITVVGIVCD-MQDKEPQFIFLIDDGTGRIECSRWAH-------EQMEFNEV--------- 112
+ V G V + + K+ + IF +DDG+G +EC W EQME +
Sbjct: 27 VEVCGFVVEKRRRKDSKVIFTVDDGSGCVECVVWTQDGDAVSGEQMELFGIASTADGAAA 86
Query: 113 --NQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
I G RV G ++ + +R +NA +++ +D NE
Sbjct: 87 VARDIRVGSLARVQGRIRDWNGRRQINATAVQVDLDPNE 125
>gi|395333489|gb|EJF65866.1| hypothetical protein DICSQDRAFT_165568 [Dichomitus squalens
LYAD-421 SS1]
Length = 382
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 28 PSSSFSKNRNVRTLLPMTVKQLSELSSNDESSAS--IDGADVNTITVVGIVCDMQDKEPQ 85
P+ S K R P+T++QL + + D S A ID ++N I++V D+ E
Sbjct: 21 PNGSREKTR------PVTIRQLLD-AKRDHSEAPFKIDDHEINRISLVAHAVDVHRYEST 73
Query: 86 FIFLIDDGT--GRIECSRWAHEQM--EFNEVNQISKGMYVRVYGHLK---AFQDKRSLNA 138
++ ++DGT GRI+ + E ++ +Q + +YV V G L + +
Sbjct: 74 VVYTLEDGTSLGRIDARHYPTGSSFEELSDSDQGTSQLYVHVLGTLDLKVKLGSRNVIRV 133
Query: 139 YSLRPIIDFNEITSHFVECIYVQL 162
+ + D N++ H +E +V L
Sbjct: 134 LHMYRVTDPNQLFFHILEAAFVTL 157
>gi|449275577|gb|EMC84390.1| Oligonucleotide/oligosaccharide-binding fold-containing protein 1
[Columba livia]
Length = 378
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 30/142 (21%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAH------------------ 104
+G V + VVGIV ++++ F + +DD TG I C W +
Sbjct: 50 NGHPVRQVDVVGIVVQRKERDAFFNYGVDDSTGVINCVCWKNPMVLETSLSGRPRTPSSL 109
Query: 105 ---EQME-----FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR----PIIDFNEITS 152
EQM+ ++ ++ G VRV G ++ ++ +R + A P+ D
Sbjct: 110 TVLEQMKKLQEMVSQKTRLEIGDVVRVRGQIRTYRQQREVQALCFYKVDDPVCDVQISRM 169
Query: 153 HFVECIYVQLYNTRLRGGSSNQ 174
+ C+Y ++Y+ +G Q
Sbjct: 170 LELPCLYREVYDKPFQGPEEGQ 191
>gi|409096331|ref|ZP_11216355.1| OB-fold nucleic acid binding domain-containing protein
[Thermococcus zilligii AN1]
Length = 669
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 60 ASIDGADVNTITVV-GIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ--IS 116
+SI ADV I V+ G + D+ +DDGTGRI + +E + + +
Sbjct: 365 SSIGKADVGRIVVIEGNIVDVAQVGSNLKLTVDDGTGRIVVFIPSSAVLELDNTTRDSLK 424
Query: 117 KGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
KG+ VR+ G+++ +Q + Y+ + I+ + E
Sbjct: 425 KGLGVRIGGYVEEYQGTLEVVPYTGKAILAYGE 457
>gi|378755292|gb|EHY65319.1| hypothetical protein NERG_01765 [Nematocida sp. 1 ERTm2]
Length = 235
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 29 SSSFSKNRNVRTLLPMTVKQLSELSSND--ESSASIDGADVNTITVVGIVCD---MQDKE 83
S S S + V+T+ M +K + ++ ND + + G +++ + VVG + MQ+
Sbjct: 3 SLSISDGKGVQTIRRMPIKHVKQVDFNDAIKITTQFRGQEISLVEVVGWITTESPMQNGG 62
Query: 84 PQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+F I DGT I C++WA + + + KG VRV G L
Sbjct: 63 KRF--SISDGTDSIWCTQWADKNYMY-----VKKGALVRVIGTL 99
>gi|429327164|gb|AFZ78924.1| hypothetical protein BEWA_017650 [Babesia equi]
Length = 293
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 15 GGFMPSQATT-VPDPSSSFSKNRNV--RTLLPMTVKQLSELSSNDESSASIDGADVNTIT 71
GGF+ + + D SS +K+ NV +T +P+ + + + S ++ G + I
Sbjct: 28 GGFLDEDVSNFITDDVSSKNKSENVQKKTFMPLKISMIHNAWKSGGSFLNVFGYQLEIIK 87
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
+VG + + + + + F++DDG+G+++C
Sbjct: 88 IVGRIKETKSTDQETTFVVDDGSGKVDC 115
>gi|18390729|ref|NP_563781.1| CST complex subunit STN1 [Arabidopsis thaliana]
gi|75335200|sp|Q9LMK5.1|STN1_ARATH RecName: Full=CST complex subunit STN1; AltName: Full=Suppressor of
cdc thirteen homolog; Short=AtSTN1
gi|8954034|gb|AAF82208.1|AC067971_16 F10K1.17 [Arabidopsis thaliana]
gi|21554324|gb|AAM63429.1| unknown [Arabidopsis thaliana]
gi|26452561|dbj|BAC43365.1| unknown protein [Arabidopsis thaliana]
gi|28827422|gb|AAO50555.1| unknown protein [Arabidopsis thaliana]
gi|332189958|gb|AEE28079.1| CST complex subunit STN1 [Arabidopsis thaliana]
Length = 160
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI-FLIDDGTGRIEC 99
L+ +++L++ + S + + GA V+ + +VG + +D P+F+ F +DDGTG + C
Sbjct: 12 LVARDIQRLTQSPTESNSFSLLGGACVSRVEIVGTIVS-RDLTPKFLKFGVDDGTGCVTC 70
Query: 100 ------------SRWAHEQMEF------NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
SRW + + QI G RV G + +++ + A
Sbjct: 71 VMWLNQLTSSYFSRWDPATILLLASAARKQAAQIRIGAVARVRGRVGSYRGVMQITANVA 130
Query: 142 RPIIDFNEITSHFVECIYVQLYNTRLR 168
D N H++EC+ + R+R
Sbjct: 131 VAERDPNAEILHWLECLKLGQSCYRVR 157
>gi|294463299|gb|ADE77185.1| unknown [Picea sitchensis]
Length = 185
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHE------------QME--- 108
G V + +VG+V + K+ F +DDG+G + C W + QME
Sbjct: 46 GRPVRKVEMVGVVVSRERKDKFLKFELDDGSGCVPCILWLNHMTNRYYPKTDQLQMESMA 105
Query: 109 ---FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
+ Q+ G VRV G + + + + S D N H++ECI
Sbjct: 106 AMALKQAEQVQLGRLVRVQGRITLYNKQLQITVSSAVVEKDPNAEILHWMECI 158
>gi|226480512|emb|CAX73353.1| Replication protein A 32 kDa subunit [Schistosoma japonicum]
Length = 147
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 14 GGGFMPSQATTVPDPSSSFSKNRNVR-TLLPMTVKQLSELSSNDESSASIDGADVNTITV 72
GGG+M S +S+ K N + T++P T ++ + + + S G + + ITV
Sbjct: 17 GGGYMASAG------ASAGQKKINYQGTIVPCTCAEILAANQDGDKFVSPCGLEFSQITV 70
Query: 73 VGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ---ISKGMYVRVYGHLKA 129
VGIV + + + + IDD TG ++ E + Q + YVRV+GH++
Sbjct: 71 VGIVRSVNESSTRVEYEIDDYTGPYLPVKFFTEDQDSTSSIQSRPFRELSYVRVHGHVRN 130
Query: 130 FQDKRSLNAY 139
FQ + + A+
Sbjct: 131 FQGVKHVIAF 140
>gi|209881913|ref|XP_002142394.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
gi|209558000|gb|EEA08045.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
Length = 346
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 39 RTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTG--- 95
R +P T+K + E +S + G V+++T+VG + Q + IF I DGTG
Sbjct: 98 RMCVPSTIKIILESLEKSPNSFILYGIRVSSVTIVGWIIHKQMYNSRMIFRIADGTGGID 157
Query: 96 -RIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
RI+ + N ++ + +GM +R+ G +
Sbjct: 158 ARIDIDTETTGEELINYLDTLKEGMIIRIVGQV 190
>gi|326428258|gb|EGD73828.1| hypothetical protein PTSG_12335 [Salpingoeca sp. ATCC 50818]
Length = 350
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECS 100
L P+ + E + +I ++ + +VG V D+ + + D TG I C
Sbjct: 44 LTPVVARLCHEAEILAHDNVTIRSTPMSLLRLVGCVQDIVSVAMFTMMDVADHTGVISCR 103
Query: 101 RWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV 160
W + + +G YV + G + D R + + P+ DFN+IT H + ++V
Sbjct: 104 SW-------RPLPSL-QGAYVCIVGRIVGNADTRIFDLQHVAPVTDFNQITYHLLSTVFV 155
>gi|449505865|ref|XP_004174912.1| PREDICTED: CST complex subunit STN1 [Taeniopygia guttata]
Length = 314
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 31/150 (20%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAH------------------ 104
+G + + VVGIV ++++ + + +DD TG I C W +
Sbjct: 50 NGHPIRQVDVVGIVVQTKERDAFYNYGVDDSTGVINCVCWKNPMCLTPSLLAGHPSTPSS 109
Query: 105 ----EQME-----FNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLR----PIIDFNEIT 151
EQ++ ++ ++ G VRV GH++ ++ KR + A P+ D
Sbjct: 110 LSVFEQLKKLQETVSQRTKVEIGDVVRVRGHIRTYRQKREIQASCFYKVDDPVCDVQISR 169
Query: 152 SHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+ C+Y ++Y+ + Q + N
Sbjct: 170 MLELPCLYREVYDKPFKVPEEIQSGLEGQN 199
>gi|84995920|ref|XP_952682.1| hypothetical protein [Theileria annulata]
gi|65302843|emb|CAI74950.1| hypothetical protein TA11650 [Theileria annulata]
Length = 308
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 39 RTLLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIE 98
+T +P+ + + S ++ G ++ I ++G V + ++ + FLIDDGTG IE
Sbjct: 54 KTFMPLKINMIYSSWKTGGVSINVYGYQLDIIKLIGYVKEAKETDQDTSFLIDDGTGTIE 113
Query: 99 CSRWAHEQMEFNEVNQISK----GMYVRVYGHLKAFQDKRS--LNAYSLRPIIDFNEITS 152
C + + + N IS+ V++YG S + YS++ + EI
Sbjct: 114 CIHLSPGDISDWKRNYISELTRTKSAVKIYGGFNPLYSSSSPTIIIYSIKEVTSPEEIKL 173
Query: 153 H 153
H
Sbjct: 174 H 174
>gi|242042563|ref|XP_002468676.1| hypothetical protein SORBIDRAFT_01g050092 [Sorghum bicolor]
gi|241922530|gb|EER95674.1| hypothetical protein SORBIDRAFT_01g050092 [Sorghum bicolor]
Length = 83
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 204 QMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDEFHYKSA 262
+ VLD L P + +GVH + I ++ LP + +A+ L + +Y +ID+FH+KSA
Sbjct: 16 KQVLDILHEPANIEREHGVHVDEIVKRFRLPERNIRDAIMQLVDMGCIYNTIDDFHFKSA 75
>gi|307108432|gb|EFN56672.1| hypothetical protein CHLNCDRAFT_144539 [Chlorella variabilis]
Length = 279
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 19/156 (12%)
Query: 15 GGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA-SIDGAD------V 67
GGF+ + ++ P P S R + + +TV QL S+A +DG D
Sbjct: 51 GGFLIASSSQAPKPES----ERQAKVVRSVTVGQLHNAHQACGSAALWLDGHDFTDPFSA 106
Query: 68 NTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHL 127
+ VVG + ++ + ++DGTGRI RW +E G Y R+
Sbjct: 107 GAVEVVGKLVRVRMRVSVLDVTLEDGTGRITAKRW-ESGTALDEPAGWEVGAYYRLGLTF 165
Query: 128 KAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY 163
+ L A + + +T+HF+ I+ L+
Sbjct: 166 NFVPELSPLVAAAWK-------VTTHFLRAIFEHLH 194
>gi|170041047|ref|XP_001848289.1| insect replication protein a [Culex quinquefasciatus]
gi|167864631|gb|EDS28014.1| insect replication protein a [Culex quinquefasciatus]
Length = 242
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECS 100
+LP+ ++ + E + E + G T+T V IV + + + ++D T +++
Sbjct: 27 VLPVMLRHIQE---SPEEGIELFGYQYATVTFVAIVRQIVQTPTKVTYRMEDHTAQLDAH 83
Query: 101 RWAHEQM-EFNEVNQISKGMYVRVYGHL----KAFQDKRSLNAYSLRPIIDFNEITSHFV 155
RW E+ + N++ + Y RV G + K +++ + + + NEIT+H +
Sbjct: 84 RWIDEEHPDQNDIPVVRINSYARVVGSVRNEGKGSDRVKAVMIFKISQVDSPNEITTHLL 143
Query: 156 ECIYVQLYNTRLRG 169
E + N R +G
Sbjct: 144 EVL-----NARYKG 152
>gi|290979135|ref|XP_002672290.1| hypothetical protein NAEGRDRAFT_81289 [Naegleria gruberi]
gi|284085865|gb|EFC39546.1| hypothetical protein NAEGRDRAFT_81289 [Naegleria gruberi]
Length = 253
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGAD----VNTITVVGIVCDMQDKEPQ---FIFLIDDG 93
+ P+ ++QL + + ID + +T+V + + EP+ +DDG
Sbjct: 40 ITPVNIRQLIHAEMPETNHFVIDCKTKKKRIEQVTLVAQIVKFTN-EPEKRKLNLFLDDG 98
Query: 94 TGRIECSRWAHEQMEFNEV--NQISKGMYVRVYGHLKAFQDKRSLNAY----SLRPIIDF 147
TGR+ +A + + E I G+++R+YG L D R+ Y L I+D
Sbjct: 99 TGRMSVILYAIDTEKKFEACGGVIENGLFLRIYGILNI--DNRTGTRYIVGTGLSLIMDI 156
Query: 148 NEITSHFVECIYVQLYN 164
NE T+H ++ I L++
Sbjct: 157 NEFTTHLLDVIVASLHS 173
>gi|268565217|ref|XP_002639372.1| C. briggsae CBR-RPA-2 protein [Caenorhabditis briggsae]
Length = 286
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 42/277 (15%)
Query: 8 GAAAFAGG--GFMP-----SQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSA 60
GA +AGG FM S+A T+ D R +P+T+ L+E S +
Sbjct: 11 GAGGWAGGESSFMTDRKPDSKAATLGD-----------RLPVPVTISNLNEHFSATDDKY 59
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIF-LIDDGTGRIECSRWAHEQMEFN-EVNQISKG 118
I T+ VGIV ++ + + + L D +E +E N + + I +G
Sbjct: 60 IIGNFRFATVQTVGIVKEINQEGTTWSYDLCDPNNEAMEYRALKYENEGSNSDQSSIVEG 119
Query: 119 MYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLY-----NTRLRGGSSN 173
VR G LK+F S+ +++ P+ D + T +E +L+ N +L+ +S+
Sbjct: 120 TRVRAIGKLKSFDGSNSIMLFNITPVTDDKDFTIFELEAEAARLFFQKNMNDKLKSDASS 179
Query: 174 ----------------QPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLA 217
QP +S + + + + Q V L+ A
Sbjct: 180 RGFQGMLAPPKSRAGQQPMQQSSQGSDKKERLYPAQSQVNVEGDLRQRVTAVLKGVSEEA 239
Query: 218 NNNGVHRNVISQQLNLP-MDKLMEALESLNENSLVYS 253
+ G + I++QL + KL + L + EN L Y+
Sbjct: 240 HEEGSNILWIAEQLQEKDIKKLRDCLSGMVENGLAYT 276
>gi|297843504|ref|XP_002889633.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297335475|gb|EFH65892.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 158
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI-FLIDDGTGRIEC 99
L+ +++L++ + S + + GA V+ + VG + +D P+F+ F +DDGTG + C
Sbjct: 12 LVARDIQRLTQSPTESNSFSLLGGACVSRVETVGTIIS-RDLTPKFLKFGVDDGTGCVTC 70
Query: 100 ------------SRWAHEQMEF------NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSL 141
SRW + + + +I G RV G + +++ + A +
Sbjct: 71 VLWLNQLTSSYFSRWHPDTILLLASAARKQAAEIRIGSVARVRGRVGSYRGVMQITATVV 130
Query: 142 RPIIDFNEITSHFVECI 158
D N H++EC+
Sbjct: 131 VVERDPNAEILHWLECL 147
>gi|326923929|ref|XP_003208185.1| PREDICTED: CST complex subunit STN1-like [Meleagris gallopavo]
Length = 365
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 30/142 (21%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAH------------------ 104
+G V + VVG+V +++E + +DD TG I C W +
Sbjct: 50 NGHPVRQVDVVGMVVQTKEREAFHSYGVDDSTGVINCVCWKNPMVAERSLSDCPSTPSSL 109
Query: 105 ---EQM-EFNE-VNQISK---GMYVRVYGHLKAFQDKRSLNAYSLR----PIIDFNEITS 152
EQM +F E V+Q +K G +RV G+++ F+ +R + + P+ D
Sbjct: 110 KVLEQMKKFQEMVSQKTKLEIGDVIRVRGYVRTFRQQREIQSSCFYKVDDPVCDVQISRM 169
Query: 153 HFVECIYVQLYNTRLRGGSSNQ 174
+ C+Y ++Y+ + + Q
Sbjct: 170 LELPCLYREVYDKPFQSPGAGQ 191
>gi|374606297|ref|ZP_09679179.1| AraC family transcriptional regulator [Paenibacillus dendritiformis
C454]
gi|374388096|gb|EHQ59536.1| AraC family transcriptional regulator [Paenibacillus dendritiformis
C454]
Length = 290
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 18/203 (8%)
Query: 65 ADVNTITVVGIVCDM----QDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
A +T+ I CD+ Q K+P F + DD RW EQM E++ + M
Sbjct: 73 APEDTMDACNIYCDLWCVPQPKQPTFAYQWDDYD-----PRWLTEQMPCPELDALPTSMS 127
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS 180
+R Y HL K++L A++ +++ C Y + G + +
Sbjct: 128 LRPYPHLIEL-IKQTLAAFNRSGKYTAQAVSA----CFYSWILQWHEAGSLTQTADYRIT 182
Query: 181 NHLKEYNAISSNHYSFDEGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDK--L 238
L++ A +S D S + L+ + G+ + Q + L
Sbjct: 183 RILEQMEAYPEQRFSVDYWCS--ECGLEKSQFYRLFKQETGMSPKEYALQARMKKAAVLL 240
Query: 239 MEALESLNENSLVYSIDEFHYKS 261
ME+ +S+ E +L+ D HY S
Sbjct: 241 MESRQSITEIALMLGYDSIHYFS 263
>gi|112253335|gb|ABI14255.1| single-stranded DNA-binding replication protein A [Pfiesteria
piscicida]
Length = 283
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 40 TLLPMTVKQLSELSSNDESSA---SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
T LP+T++Q+ + S + G + + VV V + + I+DGTGR
Sbjct: 34 TCLPVTLRQMEAALAKRAGSGEELTFFGVEPKELIVVAAVESIARQGTSLEMTINDGTGR 93
Query: 97 IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR-SLNAYSLRPIIDFNEITSHFV 155
++ +R+ + ++ ++I G Y+ +G L+A ++N LR + +E++ H +
Sbjct: 94 LK-ARYFVTDAQPDDSDRIVPGRYISAFGGLRAAPAVHFAING--LRLVESVDEVSYHVI 150
Query: 156 ECIYVQL 162
E + L
Sbjct: 151 EVAHAAL 157
>gi|226495337|ref|NP_001151468.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195646980|gb|ACG42958.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 164
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 20/114 (17%)
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQ----------------- 106
G V +VG+V +E FL+DDGTG + C W + Q
Sbjct: 34 GRRVARAELVGVVVSRDRREKFLRFLVDDGTGCVPCILWLNHQYLNARTSSGPSSDHDPT 93
Query: 107 --MEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 158
M ++ G +RV G + +++ + + P D N H+++C+
Sbjct: 94 AEMALKMSEEVRLGTLLRVRGKIASYRGAIQITVRDVVP-NDPNSDVLHWLQCV 146
>gi|156400076|ref|XP_001638826.1| predicted protein [Nematostella vectensis]
gi|156225950|gb|EDO46763.1| predicted protein [Nematostella vectensis]
Length = 757
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 90 IDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNE 149
+DDG+G I+C +W + + + + + G + V G + AF++KR + + P+ D N
Sbjct: 36 VDDGSGSIDCCQWQKDDPDEDRIT-LELGELICVQGKITAFREKRQITVDFIYPLEDKNS 94
Query: 150 ITSHFVECIYVQ 161
+++ ++++
Sbjct: 95 EVLFWLDVLHLR 106
>gi|450100611|ref|ZP_21858843.1| DNA polymerase III PolC [Streptococcus mutans SF1]
gi|450171380|ref|ZP_21883971.1| DNA polymerase III PolC [Streptococcus mutans SM4]
gi|449220361|gb|EMC20241.1| DNA polymerase III PolC [Streptococcus mutans SF1]
gi|449244133|gb|EMC42520.1| DNA polymerase III PolC [Streptococcus mutans SM4]
Length = 1466
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V DM+ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDMERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|393239723|gb|EJD47253.1| hypothetical protein AURDEDRAFT_151398, partial [Auricularia
delicata TFB-10046 SS5]
Length = 229
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIEC 99
+T VGIV D+ ++E F F +DDGT +EC
Sbjct: 77 VTTVGIVVDVWEREKSFGFSVDDGTATLEC 106
>gi|440912383|gb|ELR61953.1| CST complex subunit STN1 [Bos grunniens mutus]
Length = 371
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAH-------------EQMEF 109
+G + + ++G V +++K+ + + +DD TG I C W E
Sbjct: 50 NGHPIKQVDILGTVIGVREKDAFYSYGVDDSTGVINCICWKRLNNTKSSSATAAPSAREL 109
Query: 110 NEVNQISK-------------GMYVRVYGHLKAFQDKRSLNAYSLRPIID--FNEITSHF 154
+ QI K G +RV GH++ F+ +R ++A + + D N +
Sbjct: 110 SLTPQIKKLQETIAQRAKLEIGDIIRVRGHIRMFRGEREIHATTYYKVDDPVCNVQIARM 169
Query: 155 VE--CIYVQLYNTRLRGGSSNQPQMTNSNHLKEYNAISSNHYSFD 197
+E IY ++Y+ Q +S LKE A+SSN + D
Sbjct: 170 LELPAIYRKVYD-----------QPFHSPALKEDEALSSNPGTLD 203
>gi|209880922|ref|XP_002141900.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
gi|209557506|gb|EEA07551.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
Length = 280
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQI--------SKGMYV 121
I +VGI+ +++ K+ + I+D +G I W +Q NEVN I + G V
Sbjct: 50 IRLVGIILNIKKKQKYVEYTINDSSGTIRVIFW-FDQNIINEVNLIGSIARDNPALGTLV 108
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 181
+ G + + +K + + LR + D N F +++LY +R R S Q+ SN
Sbjct: 109 DIRGTIDKYNNKIQVKCFLLRVVDDPN-----FESFWWIKLYESRNRYLSRLTTQIQTSN 163
>gi|388453435|ref|NP_001253519.1| CST complex subunit STN1 [Macaca mulatta]
gi|75076890|sp|Q4R804.1|STN1_MACFA RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|67968822|dbj|BAE00768.1| unnamed protein product [Macaca fascicularis]
gi|355783079|gb|EHH65000.1| hypothetical protein EGM_18338 [Macaca fascicularis]
gi|387542194|gb|AFJ71724.1| CST complex subunit STN1 [Macaca mulatta]
Length = 368
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 46/228 (20%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------------AHE--- 105
+G + + V+G V +++++ + + +DD TG I C W A E
Sbjct: 50 NGHPIKQVDVLGTVVGVRERDAFYSYGVDDSTGVINCICWKKLNTESVSAAPSAARELSL 109
Query: 106 -------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID--FNEITSHFVE 156
Q +I G +RV G ++ ++++R ++A + + D +N + +E
Sbjct: 110 TSQLKKLQETIERRTKIEIGDTIRVRGSIRTYREEREIHATAYYKVDDPVWNIQIARMLE 169
Query: 157 --CIYVQLYNTRLRG------------GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
IY ++Y+ R G+ + P +T+ K + N +S
Sbjct: 170 LPTIYRKIYDQPFRSSALEKEEALSNPGALDLPSLTSLLSEKAKEFLMENRV-----QSF 224
Query: 203 DQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
Q L+ + LAN +H + S Q+N D +A+ S+ +N++
Sbjct: 225 YQQELEMVESLLCLANQPVIH-SACSDQVNFKKDTTSKAIHSIFKNAI 271
>gi|413937899|gb|AFW72450.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 98
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 198 EGKSIDQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSLVY-SIDE 256
+G I +VL P + +G+H + +L LP D + A++ + +Y +ID+
Sbjct: 30 DGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 89
Query: 257 FHYKSAVNA 265
FHYKS N
Sbjct: 90 FHYKSVRNG 98
>gi|355562758|gb|EHH19352.1| hypothetical protein EGK_20040 [Macaca mulatta]
gi|380789681|gb|AFE66716.1| CST complex subunit STN1 [Macaca mulatta]
gi|383421737|gb|AFH34082.1| CST complex subunit STN1 [Macaca mulatta]
Length = 368
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 46/228 (20%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------------AHE--- 105
+G + + V+G V +++++ + + +DD TG I C W A E
Sbjct: 50 NGHPIKQVDVLGTVVGVRERDAFYSYGVDDSTGVINCICWKKLNTESVSAAPSAARELSL 109
Query: 106 -------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID--FNEITSHFVE 156
Q +I G +RV G ++ ++++R ++A + + D +N + +E
Sbjct: 110 TSQLKKLQETIERRTKIEIGDTIRVRGSIRTYREEREIHATAYYKVDDPVWNIQIARMLE 169
Query: 157 --CIYVQLYNTRLRG------------GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
IY ++Y+ R G+ + P +T+ K + N +S
Sbjct: 170 LPTIYRKIYDQPFRSSALEKEEALSNPGALDLPSLTSLLSEKAKEFLMENRV-----QSF 224
Query: 203 DQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
Q L+ + LAN +H + S Q+N D +A+ S+ +N++
Sbjct: 225 YQQELEMVESLLCLANQPVIH-SACSNQVNFKKDTTSKAIHSIFKNAI 271
>gi|332212746|ref|XP_003255480.1| PREDICTED: CST complex subunit STN1 [Nomascus leucogenys]
Length = 368
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 95/228 (41%), Gaps = 46/228 (20%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------------AHE--- 105
+G + + V+G V +++++ + + +DD TG I C W A E
Sbjct: 50 NGHPIKQVDVLGTVIGVRERDAFYSYGVDDSTGVINCICWKKLNTESVSAAPSAARELSL 109
Query: 106 -------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID--FNEITSHFVE 156
Q + +I G +RV G ++ ++++R ++A + + D +N + +E
Sbjct: 110 TSQLKKLQETIEQRTKIEIGDTIRVRGSIRTYREEREIHATAYYKVDDPVWNIQIARMLE 169
Query: 157 --CIYVQLYNTRLRG------------GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSI 202
IY ++Y+ R G+ + P +T+ K + N +S
Sbjct: 170 LPTIYRKVYDQPFRSSALEKEEALSNPGALDLPTLTSLLSEKAKEFLMENRV-----QSF 224
Query: 203 DQMVLDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
Q L+ + LAN +H + S Q+N D +A+ S+ +N++
Sbjct: 225 YQQELEMVESLLSLANQPVIH-SACSDQVNFKKDTTSKAIHSIFKNAI 271
>gi|297687334|ref|XP_002821171.1| PREDICTED: CST complex subunit STN1 [Pongo abelii]
Length = 368
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------------AHE--- 105
+G + + V+G V +++++ + + +DD TG I C W A E
Sbjct: 50 NGHPIKQVDVLGTVIGVRERDAFYSYGVDDSTGVINCICWKKLNTESVSAAPSAARELSL 109
Query: 106 -------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID--FNEITSHFVE 156
Q + +I G +RV G ++ ++++R ++A + + D +N + +E
Sbjct: 110 TSQLKKLQETIEQRTKIEIGDTIRVRGSIRTYREEREIHAAAYYKVDDPVWNIQIARMLE 169
Query: 157 --CIYVQLYNTRLRGGS-SNQPQMTNSNHLKEYN---AISSNHYSF---DEGKSIDQMVL 207
IY ++Y+ R + + ++N L N +S F + +S Q L
Sbjct: 170 LPTIYRKVYDQPFRSSALEKEEALSNPGALDLPNLTSLLSEKAKEFLMENRVQSFYQQEL 229
Query: 208 DFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
+ + LAN +H + S Q+N D +A+ S+ +N++
Sbjct: 230 EMVESLLSLANQPVIH-SACSDQVNFKKDTTSKAIHSIFKNAI 271
>gi|302808730|ref|XP_002986059.1| hypothetical protein SELMODRAFT_269089 [Selaginella moellendorffii]
gi|300146207|gb|EFJ12878.1| hypothetical protein SELMODRAFT_269089 [Selaginella moellendorffii]
Length = 108
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 70 ITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWA------HEQMEFNEVNQISKGMYVRV 123
+ +VG+ ++ K F +DDGTG I C W +Q + ++ G + V
Sbjct: 22 VEMVGVAVSVERKPKYVRFAVDDGTGCISCILWTNQSGAPQQQAAADMARLVTLGGLLAV 81
Query: 124 YGHLKAFQDKRSLNAYSLRPIIDFN 148
+G + + L SL P D N
Sbjct: 82 HGRVSRYHHHPQLTVSSLLPQPDAN 106
>gi|449888572|ref|ZP_21787325.1| DNA polymerase III PolC [Streptococcus mutans SA41]
gi|449251129|gb|EMC49155.1| DNA polymerase III PolC [Streptococcus mutans SA41]
Length = 1466
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNIKTIV 325
>gi|345565861|gb|EGX48809.1| hypothetical protein AOL_s00079g448 [Arthrobotrys oligospora ATCC
24927]
Length = 158
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 55 NDESSASIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQ 114
+ ES+ S +G + I++VG V + + E + +F IDDG+G+ + + M ++ +
Sbjct: 38 DSESTYSFNGHPIRWISIVGTVTSIDEHEKKILFSIDDGSGQCINAVARKDSMTSKDMPR 97
Query: 115 ISKGMYVRVYGHLKAFQDKRSLNAYSL 141
+ V+ G L+ + D L SL
Sbjct: 98 LHST--VKARGELELYHDAWQLKLTSL 122
>gi|322785909|gb|EFZ12528.1| hypothetical protein SINV_14985 [Solenopsis invicta]
Length = 158
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 95 GRIECSRWAHEQMEFNEVNQISK-GMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSH 153
G + W + E N ++ YVR++G L+ ++R + + P+ N++T+H
Sbjct: 1 GTVSAMMWLEADKDPAESNICTQVNTYVRIFGVLRTQSNQRFVMILRMHPLESLNDLTAH 60
Query: 154 FVECIYV 160
F+E +Y+
Sbjct: 61 FMEVLYI 67
>gi|387785283|ref|YP_006250379.1| DNA polymerase III subunit alpha [Streptococcus mutans LJ23]
gi|379131684|dbj|BAL68436.1| DNA polymerase III subunit alpha [Streptococcus mutans LJ23]
Length = 1471
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 246 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 305
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 306 VRGNIENNPFTKALTMNVQNVKTIV 330
>gi|254504091|ref|ZP_05116242.1| DNA topoisomerase IV, B subunit [Labrenzia alexandrii DFL-11]
gi|222440162|gb|EEE46841.1| DNA topoisomerase IV, B subunit [Labrenzia alexandrii DFL-11]
Length = 691
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 12 FAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTIT 71
FAG GF+ S TVP P + R L +K EL +N ++S I G DV +T
Sbjct: 317 FAGDGFINSYCNTVPTPEGG-THEAGFRYALLRGLKAYGELVNNKKASI-ITGDDV--MT 372
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQME----------FNEVNQISKGMYV 121
G + + +EP+F+ D E +R A + N+ N++ + +
Sbjct: 373 SAGGMLSVFIREPEFVGQTKDKLATNEATRVAETAVRDAFDHWLTASPNQANKLLEWVID 432
Query: 122 RVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRL-------RGGSSNQ 174
R L+ Q+K ++R + + +C Q T L GGS+ Q
Sbjct: 433 RAEERLRRRQEKDVARKTAVRKL----RLPGKLADCSTSQSEGTELFIVEGDSAGGSAKQ 488
Query: 175 PQ 176
+
Sbjct: 489 AR 490
>gi|450145497|ref|ZP_21874583.1| DNA polymerase III PolC [Streptococcus mutans 1ID3]
gi|449149311|gb|EMB53118.1| DNA polymerase III PolC [Streptococcus mutans 1ID3]
Length = 1466
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450029432|ref|ZP_21832663.1| DNA polymerase III PolC [Streptococcus mutans G123]
gi|449194564|gb|EMB95917.1| DNA polymerase III PolC [Streptococcus mutans G123]
Length = 1466
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450131087|ref|ZP_21869293.1| DNA polymerase III PolC [Streptococcus mutans NLML8]
gi|449154147|gb|EMB57757.1| DNA polymerase III PolC [Streptococcus mutans NLML8]
Length = 1466
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449981150|ref|ZP_21817655.1| DNA polymerase III PolC [Streptococcus mutans 5SM3]
gi|449176107|gb|EMB78473.1| DNA polymerase III PolC [Streptococcus mutans 5SM3]
Length = 1465
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|449925846|ref|ZP_21800450.1| DNA polymerase III PolC [Streptococcus mutans 4SM1]
gi|449161136|gb|EMB64346.1| DNA polymerase III PolC [Streptococcus mutans 4SM1]
Length = 1466
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449899898|ref|ZP_21791274.1| DNA polymerase III PolC [Streptococcus mutans R221]
gi|449257796|gb|EMC55416.1| DNA polymerase III PolC [Streptococcus mutans R221]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|450120624|ref|ZP_21865820.1| DNA polymerase III PolC [Streptococcus mutans ST6]
gi|449230117|gb|EMC29396.1| DNA polymerase III PolC [Streptococcus mutans ST6]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449878263|ref|ZP_21783551.1| DNA polymerase III PolC [Streptococcus mutans S1B]
gi|449991439|ref|ZP_21821867.1| DNA polymerase III PolC [Streptococcus mutans NVAB]
gi|449181172|gb|EMB83292.1| DNA polymerase III PolC [Streptococcus mutans NVAB]
gi|449249772|gb|EMC47875.1| DNA polymerase III PolC [Streptococcus mutans S1B]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449928932|ref|ZP_21801410.1| DNA polymerase III PolC [Streptococcus mutans 3SN1]
gi|449164814|gb|EMB67853.1| DNA polymerase III PolC [Streptococcus mutans 3SN1]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Query: 18 MPSQATTVPDPSSSFSKNRNVR--TLLPMTVKQLSELSSNDESSASIDGADVNTITVVGI 75
MP + +P P S+F + R + ++E+ + + N IT G+
Sbjct: 201 MPPEE--IPKPVSNFKERIKDRQAAFEKAEITPMAEIETEE-----------NRITFEGL 247
Query: 76 VCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLK-- 128
V D++ K + F + D T +WA + E + + ISKG ++RV G+++
Sbjct: 248 VFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLRVRGNIENN 307
Query: 129 AFQDKRSLNAYSLRPII 145
F ++N +++ I+
Sbjct: 308 PFTKALTMNVQNVKTIV 324
>gi|449911159|ref|ZP_21795020.1| DNA polymerase III PolC [Streptococcus mutans OMZ175]
gi|449258592|gb|EMC56162.1| DNA polymerase III PolC [Streptococcus mutans OMZ175]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|449881721|ref|ZP_21784597.1| DNA polymerase III PolC [Streptococcus mutans SA38]
gi|449250895|gb|EMC48933.1| DNA polymerase III PolC [Streptococcus mutans SA38]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450177283|ref|ZP_21886304.1| DNA polymerase III PolC [Streptococcus mutans SM1]
gi|449243863|gb|EMC42265.1| DNA polymerase III PolC [Streptococcus mutans SM1]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450165686|ref|ZP_21881956.1| DNA polymerase III PolC [Streptococcus mutans B]
gi|449240404|gb|EMC39082.1| DNA polymerase III PolC [Streptococcus mutans B]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450005396|ref|ZP_21826644.1| DNA polymerase III PolC [Streptococcus mutans NMT4863]
gi|449188643|gb|EMB90347.1| DNA polymerase III PolC [Streptococcus mutans NMT4863]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449894529|ref|ZP_21789284.1| DNA polymerase III PolC [Streptococcus mutans SF12]
gi|449915526|ref|ZP_21796323.1| DNA polymerase III PolC [Streptococcus mutans 15JP3]
gi|449937691|ref|ZP_21804703.1| DNA polymerase III PolC [Streptococcus mutans 2ST1]
gi|449943414|ref|ZP_21806388.1| DNA polymerase III PolC [Streptococcus mutans 11A1]
gi|450041598|ref|ZP_21837421.1| DNA polymerase III PolC [Streptococcus mutans T4]
gi|450044428|ref|ZP_21837856.1| DNA polymerase III PolC [Streptococcus mutans N34]
gi|450078266|ref|ZP_21850923.1| DNA polymerase III PolC [Streptococcus mutans N3209]
gi|450153645|ref|ZP_21877304.1| DNA polymerase III PolC [Streptococcus mutans 21]
gi|449149341|gb|EMB53146.1| DNA polymerase III PolC [Streptococcus mutans 11A1]
gi|449156314|gb|EMB59786.1| DNA polymerase III PolC [Streptococcus mutans 15JP3]
gi|449164006|gb|EMB67091.1| DNA polymerase III PolC [Streptococcus mutans 2ST1]
gi|449197609|gb|EMB98772.1| DNA polymerase III PolC [Streptococcus mutans T4]
gi|449201733|gb|EMC02715.1| DNA polymerase III PolC [Streptococcus mutans N34]
gi|449210200|gb|EMC10674.1| DNA polymerase III PolC [Streptococcus mutans N3209]
gi|449238606|gb|EMC37364.1| DNA polymerase III PolC [Streptococcus mutans 21]
gi|449255282|gb|EMC53142.1| DNA polymerase III PolC [Streptococcus mutans SF12]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|450180337|ref|ZP_21887161.1| DNA polymerase III PolC [Streptococcus mutans 24]
gi|449248313|gb|EMC46563.1| DNA polymerase III PolC [Streptococcus mutans 24]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|450087754|ref|ZP_21854439.1| DNA polymerase III PolC [Streptococcus mutans NV1996]
gi|449217459|gb|EMC17513.1| DNA polymerase III PolC [Streptococcus mutans NV1996]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450061271|ref|ZP_21843728.1| DNA polymerase III PolC [Streptococcus mutans NLML5]
gi|449207612|gb|EMC08283.1| DNA polymerase III PolC [Streptococcus mutans NLML5]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450068831|ref|ZP_21847354.1| DNA polymerase III PolC [Streptococcus mutans NLML9]
gi|449206202|gb|EMC06915.1| DNA polymerase III PolC [Streptococcus mutans NLML9]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|450057687|ref|ZP_21842690.1| DNA polymerase III PolC [Streptococcus mutans NLML4]
gi|449204944|gb|EMC05719.1| DNA polymerase III PolC [Streptococcus mutans NLML4]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|450037367|ref|ZP_21835776.1| DNA polymerase III PolC [Streptococcus mutans M21]
gi|450111982|ref|ZP_21862971.1| DNA polymerase III PolC [Streptococcus mutans SM6]
gi|449192394|gb|EMB93817.1| DNA polymerase III PolC [Streptococcus mutans M21]
gi|449223035|gb|EMC22742.1| DNA polymerase III PolC [Streptococcus mutans SM6]
Length = 1466
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449919853|ref|ZP_21798193.1| DNA polymerase III PolC [Streptococcus mutans 1SM1]
gi|449159143|gb|EMB62517.1| DNA polymerase III PolC [Streptococcus mutans 1SM1]
Length = 1465
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|290579638|ref|YP_003484030.1| DNA polymerase III subunit alpha [Streptococcus mutans NN2025]
gi|254996537|dbj|BAH87138.1| DNA polymerase III alpha subunit [Streptococcus mutans NN2025]
Length = 1470
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 245 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 304
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 305 VRGNIENNPFTKALTMNVQNVKTIV 329
>gi|450125762|ref|ZP_21867813.1| DNA polymerase III PolC [Streptococcus mutans U2A]
gi|449232112|gb|EMC31247.1| DNA polymerase III PolC [Streptococcus mutans U2A]
Length = 1466
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450116711|ref|ZP_21864646.1| DNA polymerase III PolC [Streptococcus mutans ST1]
gi|449226740|gb|EMC26235.1| DNA polymerase III PolC [Streptococcus mutans ST1]
Length = 1466
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449960017|ref|ZP_21810477.1| DNA polymerase III PolC [Streptococcus mutans 4VF1]
gi|450138868|ref|ZP_21872327.1| DNA polymerase III PolC [Streptococcus mutans NLML1]
gi|449168139|gb|EMB70975.1| DNA polymerase III PolC [Streptococcus mutans 4VF1]
gi|449233609|gb|EMC32674.1| DNA polymerase III PolC [Streptococcus mutans NLML1]
Length = 1465
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Query: 18 MPSQATTVPDPSSSFSKNRNVR--TLLPMTVKQLSELSSNDESSASIDGADVNTITVVGI 75
MP + +P P S+F + R + ++E+ + + N IT G+
Sbjct: 201 MPPEE--IPKPVSNFKERIKDRQAAFEKAEITPMAEIETEE-----------NRITFEGL 247
Query: 76 VCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLK-- 128
V D++ K + F + D T +WA + E + + ISKG ++RV G+++
Sbjct: 248 VFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLRVRGNIENN 307
Query: 129 AFQDKRSLNAYSLRPII 145
F ++N +++ I+
Sbjct: 308 PFTKALTMNVQNVKTIV 324
>gi|450050577|ref|ZP_21840361.1| DNA polymerase III PolC [Streptococcus mutans NFSM1]
gi|449202530|gb|EMC03441.1| DNA polymerase III PolC [Streptococcus mutans NFSM1]
Length = 1466
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|449969491|ref|ZP_21813257.1| DNA polymerase III PolC [Streptococcus mutans 2VS1]
gi|450094429|ref|ZP_21857032.1| DNA polymerase III PolC [Streptococcus mutans W6]
gi|450149230|ref|ZP_21876047.1| DNA polymerase III PolC [Streptococcus mutans 14D]
gi|449174117|gb|EMB76629.1| DNA polymerase III PolC [Streptococcus mutans 2VS1]
gi|449216313|gb|EMC16442.1| DNA polymerase III PolC [Streptococcus mutans W6]
gi|449234768|gb|EMC33757.1| DNA polymerase III PolC [Streptococcus mutans 14D]
Length = 1465
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|449963914|ref|ZP_21811065.1| DNA polymerase III PolC [Streptococcus mutans 15VF2]
gi|449173024|gb|EMB75620.1| DNA polymerase III PolC [Streptococcus mutans 15VF2]
Length = 1466
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|24378642|ref|NP_720597.1| DNA polymerase III PolC [Streptococcus mutans UA159]
gi|449866737|ref|ZP_21779627.1| DNA polymerase III PolC [Streptococcus mutans U2B]
gi|449873126|ref|ZP_21781668.1| DNA polymerase III PolC [Streptococcus mutans 8ID3]
gi|449906046|ref|ZP_21793266.1| DNA polymerase III PolC [Streptococcus mutans M230]
gi|449986260|ref|ZP_21820094.1| DNA polymerase III PolC [Streptococcus mutans NFSM2]
gi|450083762|ref|ZP_21853102.1| DNA polymerase III PolC [Streptococcus mutans N66]
gi|32469722|sp|Q8DWE0.1|DPO3_STRMU RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|24376501|gb|AAN57903.1|AE014864_1 DNA polymerase III, alpha subunit [Streptococcus mutans UA159]
gi|449154188|gb|EMB57792.1| DNA polymerase III PolC [Streptococcus mutans 8ID3]
gi|449178224|gb|EMB80496.1| DNA polymerase III PolC [Streptococcus mutans NFSM2]
gi|449212665|gb|EMC13020.1| DNA polymerase III PolC [Streptococcus mutans N66]
gi|449257536|gb|EMC55184.1| DNA polymerase III PolC [Streptococcus mutans M230]
gi|449263612|gb|EMC60981.1| DNA polymerase III PolC [Streptococcus mutans U2B]
Length = 1465
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|449947600|ref|ZP_21807513.1| DNA polymerase III PolC [Streptococcus mutans 11SSST2]
gi|449168444|gb|EMB71262.1| DNA polymerase III PolC [Streptococcus mutans 11SSST2]
Length = 1465
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|397648908|ref|YP_006489435.1| DNA polymerase III PolC [Streptococcus mutans GS-5]
gi|449997857|ref|ZP_21824130.1| DNA polymerase III PolC [Streptococcus mutans A9]
gi|392602477|gb|AFM80641.1| DNA polymerase III PolC [Streptococcus mutans GS-5]
gi|449181493|gb|EMB83585.1| DNA polymerase III PolC [Streptococcus mutans A9]
Length = 1466
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450107964|ref|ZP_21861243.1| DNA polymerase III PolC [Streptococcus mutans SF14]
gi|449221247|gb|EMC21042.1| DNA polymerase III PolC [Streptococcus mutans SF14]
Length = 1466
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450071225|ref|ZP_21848041.1| DNA polymerase III PolC [Streptococcus mutans M2A]
gi|449212603|gb|EMC12961.1| DNA polymerase III PolC [Streptococcus mutans M2A]
Length = 1466
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|450000933|ref|ZP_21825432.1| DNA polymerase III PolC [Streptococcus mutans N29]
gi|449185175|gb|EMB87075.1| DNA polymerase III PolC [Streptococcus mutans N29]
Length = 1465
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|449975247|ref|ZP_21815693.1| DNA polymerase III PolC [Streptococcus mutans 11VS1]
gi|449177110|gb|EMB79424.1| DNA polymerase III PolC [Streptococcus mutans 11VS1]
Length = 1465
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G+V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 240 NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 299
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 300 VRGNIENNPFTKALTMNVQNVKTIV 324
>gi|426253053|ref|XP_004020216.1| PREDICTED: CST complex subunit STN1 [Ovis aries]
Length = 368
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 63 DGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW-----------AHEQMEFNE 111
+G + + ++G V +++K+ + + +DD TG I C W A E +
Sbjct: 50 NGHPIKQVDILGTVIGVREKDAFYSYGVDDSTGVINCICWKSLNNTKSSSAAPSARELSL 109
Query: 112 VNQISK-------------GMYVRVYGHLKAFQDKRSLNAYSLRPIID 146
+Q+ K G +RV GH++ F+ +R ++A + + D
Sbjct: 110 TSQLKKLQETTAQRAKLEIGDIIRVRGHIRMFRGEREIHATTYYKVDD 157
>gi|390597897|gb|EIN07296.1| hypothetical protein PUNSTDRAFT_114758 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 364
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 32 FSKNRNVRTLLPMTVKQLSELSSNDESSA-SIDGADVNTITVVGIVCDMQDKEPQFIFLI 90
F++ R VR P+T+ QL E + +I+ +++ + VV V + + + ++++
Sbjct: 28 FNEWRGVR---PVTIYQLKRAEKRSEDAKFTIENHEIHHVCVVAHVVSIDTETGENVYML 84
Query: 91 DDGTGRIECSRWAHEQMEF-----NEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRP 143
+DGTGRI+ R E +E + + +++G + RV G LK ++ ++L +RP
Sbjct: 85 EDGTGRIK-GRQYEEDIEGTVDDPDGLCGVARGTFARVIGILKLWKIFKTLQVLHVRP 141
>gi|218192901|gb|EEC75328.1| hypothetical protein OsI_11709 [Oryza sativa Indica Group]
Length = 327
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 21/124 (16%)
Query: 64 GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHE------------------ 105
G V +VG+V +E FL+DDGTG + C W +
Sbjct: 200 GRTVTRAEIVGVVVSRDRREKFLRFLVDDGTGCVPCVLWLNHHYLSAASSSFRASDSDPT 259
Query: 106 -QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYV--QL 162
+M +S G +RV G + + + + D N H+++CI + +
Sbjct: 260 AEMALRMSEVVSLGTLLRVRGRIVLYHGAIQIAVRDVVLEKDPNVEVMHWLQCICMAKEC 319
Query: 163 YNTR 166
Y+ R
Sbjct: 320 YDLR 323
>gi|429748138|ref|ZP_19281349.1| TonB-dependent receptor plug domain protein [Capnocytophaga sp.
oral taxon 380 str. F0488]
gi|429161175|gb|EKY03601.1| TonB-dependent receptor plug domain protein [Capnocytophaga sp.
oral taxon 380 str. F0488]
Length = 963
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
I M D + D G + W +Q++ + +I+K M+ G +A+
Sbjct: 160 IRPKMVDSYSWATYFNDADVGGTQFQDWKLQQIKDFQEGKITKSMFENSSGKWEAW---- 215
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHL 183
+A+ L PI + N I H+ + Y +N + GGS ++N+L
Sbjct: 216 --DAHDLLPIANTNWIEEHYKKAYYSYEHNLSVSGGSDKNQYYISANYL 262
>gi|224085511|ref|XP_002307601.1| predicted protein [Populus trichocarpa]
gi|222857050|gb|EEE94597.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 19/134 (14%)
Query: 44 MTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI-FLIDDGTGRIECSRW 102
+++ Q S+ D + + ++ ++G++ + K +F+ F IDDGTG + C W
Sbjct: 18 LSLAQTPSFSTYDPITFTRKNTTISRTEILGVITSRELKPNKFLKFTIDDGTGCVTCVLW 77
Query: 103 AHE------------------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPI 144
++ M + ++I G+ RV G + ++ + +
Sbjct: 78 LNQLTSPYFSRRNPANVKLIADMAAHFASEIKIGLVARVRGRIAGYRGAVQVTVSDVVVE 137
Query: 145 IDFNEITSHFVECI 158
D N H+++CI
Sbjct: 138 RDPNVEAFHWLDCI 151
>gi|420149481|ref|ZP_14656657.1| TonB-linked outer membrane protein, SusC/RagA family
[Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394753704|gb|EJF37211.1| TonB-linked outer membrane protein, SusC/RagA family
[Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 1049
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 75 IVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKR 134
I M D + D G + W +Q++ + +I+K M+ G +A+
Sbjct: 246 IRPKMVDSYSWATYFNDADVGGTQFQDWKLQQIKDFQEGKITKSMFENSSGKWEAW---- 301
Query: 135 SLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSNHL 183
+A+ L PI + N I H+ + Y +N + GGS ++N+L
Sbjct: 302 --DAHDLLPIANTNWIEEHYKKAYYSYEHNLSVSGGSDKNQYYISANYL 348
>gi|254524078|ref|ZP_05136133.1| DNA polymerase III, alpha subunit subfamily, putative
[Stenotrophomonas sp. SKA14]
gi|219721669|gb|EED40194.1| DNA polymerase III, alpha subunit subfamily, putative
[Stenotrophomonas sp. SKA14]
Length = 1196
Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 66 DVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYG 125
+V T+ +V + E Q ++DG GR+ECS ++ EF + ++K + V G
Sbjct: 1023 EVQTVLAGQVVGVRRKGESQIFIQLEDGRGRVECSAFSDAMAEFGHL--MTKDRILVVKG 1080
Query: 126 HLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQL 162
L+ + A +R + DF+E+ +++ + ++L
Sbjct: 1081 GLREDEFNGGF-ALRIRQVWDFDEVCANYATRLSLRL 1116
>gi|402881413|ref|XP_003904268.1| PREDICTED: CST complex subunit STN1 [Papio anubis]
Length = 368
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 92/224 (41%), Gaps = 46/224 (20%)
Query: 67 VNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRW--------------AHE------- 105
+ + V+G V +++++ + + +DD TG I C W A E
Sbjct: 54 IKQVDVLGTVVGVRERDAFYSYGVDDSTGVINCICWKKLNTESVSAAPSAARELSLTSQL 113
Query: 106 ---QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIID--FNEITSHFVE--CI 158
Q +I G +RV G ++ ++++R ++A + + D +N + +E I
Sbjct: 114 KKLQETIERRTKIEIGDTIRVRGSIRTYREEREIHATAYYKVDDPVWNIQIARMLELPTI 173
Query: 159 YVQLYNTRLRG------------GSSNQPQMTNSNHLKEYNAISSNHYSFDEGKSIDQMV 206
Y ++Y+ R G+ + P +T+ K + N +S Q
Sbjct: 174 YRKVYDQPFRSSALEKEEALSNPGALDLPSLTSLLSEKAKEFLMENRV-----QSFYQQE 228
Query: 207 LDFLRRPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNENSL 250
L+ + LAN +H + S Q+N D +A+ S+ +N++
Sbjct: 229 LEMVESLLCLANQPVIH-SACSDQVNFKKDTTSKAIHSIFKNAI 271
>gi|307946858|ref|ZP_07662193.1| DNA topoisomerase IV, B subunit [Roseibium sp. TrichSKD4]
gi|307770522|gb|EFO29748.1| DNA topoisomerase IV, B subunit [Roseibium sp. TrichSKD4]
Length = 682
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 12 FAGGGFMPSQATTVPDPSSSFSKNRNVRTLLPMTVKQLSELSSNDESSASIDGADVNTIT 71
FAG GF+ S TVP P + +R L +K EL +N++ +A I G D+ +T
Sbjct: 308 FAGDGFVNSYCNTVPTPEGG-THETGLRYALMRGLKAYGEL-TNNKKAAIITGDDI--LT 363
Query: 72 VVGIVCDMQDKEPQFIFLIDDGTGRIECSR 101
G + + +EP+F+ D E +R
Sbjct: 364 SAGGMLSVFIREPEFVGQTKDKLATNEATR 393
>gi|450161236|ref|ZP_21880447.1| DNA polymerase III PolC [Streptococcus mutans 66-2A]
gi|449238928|gb|EMC37666.1| DNA polymerase III PolC [Streptococcus mutans 66-2A]
Length = 1466
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 68 NTITVVGIVCDMQDKEPQ-----FIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVR 122
N IT G V D++ K + F + D T +WA + E + + ISKG ++R
Sbjct: 241 NRITFEGFVFDVERKTTRTRRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR 300
Query: 123 VYGHLK--AFQDKRSLNAYSLRPII 145
V G+++ F ++N +++ I+
Sbjct: 301 VRGNIENNPFTKALTMNVQNVKTIV 325
>gi|294949566|ref|XP_002786261.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900418|gb|EER18057.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 309
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 39 RTLLPMTVKQLSELSSNDESSASID--GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR 96
R L+P+ V+ + + I+ GA + ++G D++ + +DD TG
Sbjct: 58 RPLIPVNVRVFHDAVTQHSGGDDIEVFGAAARVVEILGNARDVEHDGLAIHWTLDDFTGS 117
Query: 97 IECSRWAHEQ--MEFNEVNQISKGM--------YVRVYGHLKAFQDKRSLNAYSLRPIID 146
+ C + E ++VN+I K YVRV G ++ + ++A + P+ D
Sbjct: 118 VRCKMYLEESDTTGRDKVNEILKNGKFHIHGQPYVRVIGAIRGGSNPY-ISALKVLPVDD 176
Query: 147 FNEI 150
NEI
Sbjct: 177 LNEI 180
>gi|401398468|ref|XP_003880322.1| putative replication protein A2 [Neospora caninum Liverpool]
gi|325114732|emb|CBZ50288.1| putative replication protein A2 [Neospora caninum Liverpool]
Length = 282
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 88 FLIDDGTGRIECSRW-------AHEQMEFNEVNQISKGMYVRVYGHLKAF-QDKRSLNAY 139
F ++DGTG ++C W ++Q Q++ YVRVYG + Q L +
Sbjct: 155 FELEDGTGVVDC-EWLLGDDITPYKQKRVEAALQVNN--YVRVYGQMSTLGQAVPMLRVH 211
Query: 140 SLRPIIDFNEITSHFVEC----IYVQLYNTRL 167
++RP+ ++ H +C + ++ + +L
Sbjct: 212 AVRPVTSAGDLLFHEADCCSAFVKIKFFGQQL 243
>gi|270268747|gb|ACZ65915.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268749|gb|ACZ65916.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268751|gb|ACZ65917.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268753|gb|ACZ65918.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268755|gb|ACZ65919.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268757|gb|ACZ65920.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268759|gb|ACZ65921.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268761|gb|ACZ65922.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268763|gb|ACZ65923.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268765|gb|ACZ65924.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268767|gb|ACZ65925.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268769|gb|ACZ65926.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268771|gb|ACZ65927.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268773|gb|ACZ65928.1| putative replication protein A middle subunit [Nasonia giraulti]
Length = 185
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
++ G+ V +T +G+V ++ + F + D TG I +W E N + + Y
Sbjct: 39 TVWGSPVRLVTFLGLVRKIEPTSTKVSFELSDDTGNISGLKWL-EGDSANYESPVKVNSY 97
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS 180
RV+G ++ + + +++P+ E+ SH +E + L + +N +
Sbjct: 98 ARVHGMIRDQGEDHYVLILNIQPMDHLMELLSHHMEVTLMSLQGDSMVNKVANNDHSMGN 157
Query: 181 NHLKEYNAISSNHYSFDEGKSIDQMVLDFL 210
+K + +SN S + QMVLD +
Sbjct: 158 QSVKNGSVNNSNANSGLNRQQ--QMVLDII 185
>gi|270268713|gb|ACZ65898.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268715|gb|ACZ65899.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268717|gb|ACZ65900.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268719|gb|ACZ65901.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268721|gb|ACZ65902.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268723|gb|ACZ65903.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268725|gb|ACZ65904.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268727|gb|ACZ65905.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268729|gb|ACZ65906.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268731|gb|ACZ65907.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268733|gb|ACZ65908.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268735|gb|ACZ65909.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268737|gb|ACZ65910.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268739|gb|ACZ65911.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268741|gb|ACZ65912.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268743|gb|ACZ65913.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268745|gb|ACZ65914.1| putative replication protein A middle subunit [Nasonia longicornis]
Length = 185
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 61 SIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMY 120
++ G V +T +G+V ++ + F + D TG I +W E N + + Y
Sbjct: 39 TVWGTPVRLVTFLGLVRKIEPTSTKISFELSDDTGNISGLKWL-EGDSANYESPVKVNSY 97
Query: 121 VRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNS 180
RV+G ++ + + +++P+ E+ SH +E + L + +N +
Sbjct: 98 ARVHGMIRDQGEDHYVLIVNIQPMDHLMELLSHHMEVTLMSLQGDSMVNKVANNDHSMGN 157
Query: 181 NHLKEYNAISSNHYSFDEGKSIDQMVLDFL 210
+K + +SN S + QMVLD +
Sbjct: 158 QSVKNGSVNNSNANSGLNRQQ--QMVLDII 185
>gi|400180216|gb|AFP73237.1| CST complex subunit STN1-like protein [Carica papaya]
Length = 154
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDKEPQFI-FLIDDGTGRIEC 99
LL L++ S+ +S G ++ + +G V K +F+ F +DDGTG I C
Sbjct: 12 LLAFDFTSLTQTRSHSKSFTR-KGIPISRVESLGTVVSRDLKPSRFLKFKLDDGTGCIAC 70
Query: 100 SRWAHE--------------QMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPII 145
W ++ Q+ + +I G RV G + ++ + + +
Sbjct: 71 ILWLNQLSSNQNPSTVRLIAQVANHLAEEIKMGRVARVRGRVTGYRGRIQITVSDIVIER 130
Query: 146 DFNEITSHFVECIYV 160
D N H++ECI +
Sbjct: 131 DPNAQILHWLECIRL 145
>gi|237840155|ref|XP_002369375.1| replication protein A2, putative [Toxoplasma gondii ME49]
gi|211967039|gb|EEB02235.1| replication protein A2, putative [Toxoplasma gondii ME49]
gi|221483062|gb|EEE21386.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221503994|gb|EEE29671.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 278
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 87 IFLIDDGTGRIECSRW-------AHEQMEFNEVNQISKGMYVRVYGHLKAF-QDKRSLNA 138
F ++DGTG ++C W ++Q +++ YVRVYG + Q L
Sbjct: 152 CFELEDGTGVVDC-EWLLGDDITPYKQKRVESTIRVNN--YVRVYGQMSTLGQAVPMLRV 208
Query: 139 YSLRPIIDFNEITSHFVEC----IYVQLYNTRL 167
+++RP+ E+ H +C + ++ + +L
Sbjct: 209 HAVRPVTSAGELLFHEADCCSSFVKIKFFGQQL 241
>gi|2498848|sp|Q23697.1|RFA2_CRIFA RecName: Full=Replication protein A 28 kDa subunit; Short=RP-A p28;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2
gi|410432|emb|CAA80683.1| 28 kilodalton subunit of replication protein A [Crithidia
fasciculata]
Length = 258
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 24/141 (17%)
Query: 41 LLPMTVKQLSELSSNDESSASIDGADVNTITVVGIVCDMQDK----------EPQFIFLI 90
+ P+T+KQ+ E S +DG +V TVVG V ++ F + I
Sbjct: 30 IRPLTIKQMLEAQSVGGGVMVVDGREVTQATVVGRVVGYENANMASGGGAITAKHFGYRI 89
Query: 91 DDGTGRIECSRW-----AHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPII 145
D TG I +W A E + N +VR G + +Q + ++ +
Sbjct: 90 TDNTGMIVVRQWIDADRAQEPIPLNT--------HVRASGTVNVWQQSPIVTG-TVVSMA 140
Query: 146 DFNEITSHFVECIYVQLYNTR 166
D NE+ H ++ I L T+
Sbjct: 141 DSNEMNYHMLDAILTHLRLTQ 161
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,060,614,901
Number of Sequences: 23463169
Number of extensions: 162911351
Number of successful extensions: 424172
Number of sequences better than 100.0: 576
Number of HSP's better than 100.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 224
Number of HSP's that attempted gapping in prelim test: 423146
Number of HSP's gapped (non-prelim): 618
length of query: 265
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 125
effective length of database: 9,074,351,707
effective search space: 1134293963375
effective search space used: 1134293963375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)