BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024595
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYU7|PPA4_ARATH Purple acid phosphatase 4 OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1
Length = 339
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 207/261 (79%), Gaps = 2/261 (0%)
Query: 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
MG IGE+++I+FV+STGDN Y++G+ +DPAF SF++IYT+PSLQK WY VLGNHDYR
Sbjct: 69 MGRIGEEMDINFVVSTGDNIYDNGMKSIDDPAFQLSFSNIYTSPSLQKPWYLVLGNHDYR 128
Query: 61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
GDVEAQLSP+L DSRW+C RSFI+DAEIAE FVDTTPFVD YF P D TYDW GV
Sbjct: 129 GDVEAQLSPILRSMDSRWICMRSFIVDAEIAELFFVDTTPFVDAYFLSPQDQTYDWSGVS 188
Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
RK YL +L +++ L+ S AKWKIVVGHH IKSA HG TKEL LLPILE N VD+
Sbjct: 189 PRKSYLQTILTELEMGLRESSAKWKIVVGHHAIKSASIHGNTKELESLLLPILEANKVDL 248
Query: 181 YVNGHDHCLQHISSNG--IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
Y+NGHDHCLQHIS++ I+FLTSGGGSKAWRG NW +PE++K +YDGQGFMSVK+TRS
Sbjct: 249 YMNGHDHCLQHISTSQSPIQFLTSGGGSKAWRGYYNWTTPEDMKFFYDGQGFMSVKITRS 308
Query: 239 EAVVLFYDVHGNILHKWSIPK 259
E V+FYDV GN LHKW K
Sbjct: 309 ELSVVFYDVSGNSLHKWDTSK 329
>sp|Q8S341|PPA7_ARATH Purple acid phosphatase 7 OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 328
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 211/261 (80%), Gaps = 1/261 (0%)
Query: 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
MG++GEKL+IDFVIS GDNFY+DGL G DP+F SF+ IYT PSLQKQWY+VLGNHDYR
Sbjct: 64 MGVVGEKLDIDFVISVGDNFYDDGLKGVNDPSFEASFSHIYTHPSLQKQWYSVLGNHDYR 123
Query: 61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
G+VEAQLS VLT+KD RW C RSF+L + + +F F DT PFV++YF +P D TYDWR V
Sbjct: 124 GNVEAQLSKVLTQKDWRWFCRRSFVLSSGMVDFFFADTNPFVEKYFTEPEDHTYDWRNVL 183
Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
R +Y+S+LL D+D +K S+A WK VVGHH IK+AG+HGVT+EL+ +LLPILEEN VD+
Sbjct: 184 PRNKYISNLLHDLDLEIKKSRATWKFVVGHHGIKTAGNHGVTQELVDQLLPILEENKVDL 243
Query: 181 YVNGHDHCLQHISSNG-IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE 239
Y+NGHDHCLQHI S+G +FLTSGGGSKAWRG W P+ELKLYYDGQGFMS+ +T S+
Sbjct: 244 YINGHDHCLQHIGSHGKTQFLTSGGGSKAWRGHVQPWDPKELKLYYDGQGFMSLHITHSK 303
Query: 240 AVVLFYDVHGNILHKWSIPKE 260
A ++YDV GN+LH+ S+ K
Sbjct: 304 AKFIYYDVSGNVLHRSSLSKR 324
>sp|Q8H129|PPA3_ARATH Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1
Length = 366
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/258 (67%), Positives = 209/258 (81%), Gaps = 3/258 (1%)
Query: 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
MG IGEKL+IDFVISTGDNFY++GLT DP F DSFT+IYTAPSLQK WY+VLGNHDYR
Sbjct: 97 MGEIGEKLDIDFVISTGDNFYDNGLTSLHDPLFQDSFTNIYTAPSLQKPWYSVLGNHDYR 156
Query: 61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
GDV AQLSP+L D+RW+C RSFI++AEI + FVDTTPFVD+YF P YDW GV
Sbjct: 157 GDVRAQLSPMLRALDNRWVCMRSFIVNAEIVDLFFVDTTPFVDKYFIQPNKHVYDWSGVL 216
Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
R+ YL++LLK++D AL+ S AKWKIV+GHHTIKSAGHHG T EL LLPIL+ N VD+
Sbjct: 217 PRQTYLNNLLKELDVALRESVAKWKIVIGHHTIKSAGHHGNTIELEKHLLPILQANEVDL 276
Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWR-GDRNWWSPEELKLYYDGQGFMSVKMTR 237
YVNGHDHCL+HISS + I+F+TSGGGSKAW+ GD N+ PEE++ YYDGQGFMSV ++
Sbjct: 277 YVNGHDHCLEHISSVDSNIQFMTSGGGSKAWKGGDVNYVEPEEMRFYYDGQGFMSVHVSE 336
Query: 238 SEAVVLFYDVHGNILHKW 255
+E V+FYDV G++LH W
Sbjct: 337 AELRVVFYDVFGHVLHHW 354
>sp|Q8VYZ2|PPA8_ARATH Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 335
Score = 362 bits (930), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 2/262 (0%)
Query: 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
MG IG+ L IDF+ISTGDNFY+DG+ D F DSFT+IYTA SLQK WYNVLGNHDYR
Sbjct: 68 MGKIGKDLNIDFLISTGDNFYDDGIISPYDSQFQDSFTNIYTATSLQKPWYNVLGNHDYR 127
Query: 61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
G+V AQLSP+L D RW+C RS++++AEI + FVDTTPFVD YF++P D YDWRGV
Sbjct: 128 GNVYAQLSPILRDLDCRWICLRSYVVNAEIVDIFFVDTTPFVDRYFDEPKDHVYDWRGVL 187
Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
R +YL+ LL DVD AL+ S AKWKIVVGHHTIKSAGHHG T EL +LLPILE N VD+
Sbjct: 188 PRNKYLNSLLTDVDVALQESMAKWKIVVGHHTIKSAGHHGNTIELEKQLLPILEANEVDL 247
Query: 181 YVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238
Y+NGHDHCL+HISS +GI+F+TSGGGSKAW+GD N W+P+E++ YYDGQGFMSV + +
Sbjct: 248 YINGHDHCLEHISSINSGIQFMTSGGGSKAWKGDVNDWNPQEMRFYYDGQGFMSVYTSEA 307
Query: 239 EAVVLFYDVHGNILHKWSIPKE 260
E V+FYD G++LH+WS K
Sbjct: 308 ELRVVFYDGLGHVLHRWSTLKN 329
>sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17 OS=Arabidopsis thaliana GN=PAP17 PE=2
SV=1
Length = 338
Score = 354 bits (908), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 209/269 (77%), Gaps = 4/269 (1%)
Query: 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60
MG IGEK+++DFV+STGDNFY++GL E DP F SF++IYTAPSLQKQWY+VLGNHDYR
Sbjct: 69 MGKIGEKIDLDFVVSTGDNFYDNGLFSEHDPNFEQSFSNIYTAPSLQKQWYSVLGNHDYR 128
Query: 61 GDVEAQLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY 120
GD EAQLS VL DSRW+C RSF++DAE+ E FVDTTPFV EY+ + +YDWR V
Sbjct: 129 GDAEAQLSSVLREIDSRWICLRSFVVDAELVEMFFVDTTPFVKEYYTEADGHSYDWRAVP 188
Query: 121 RRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDM 180
R Y+ LL+D++ +LK+SKA+WKIVVGHH ++S GHHG TKEL LLPIL+EN VD+
Sbjct: 189 SRNSYVKALLRDLEVSLKSSKARWKIVVGHHAMRSIGHHGDTKELNEELLPILKENGVDL 248
Query: 181 YVNGHDHCLQHIS--SNGIEFLTSGGGSKAWRGDRN--WWSPEELKLYYDGQGFMSVKMT 236
Y+NGHDHCLQH+S + I+FLTSG GSKAWRGD N +P+ LK YYDGQGFMS + T
Sbjct: 249 YMNGHDHCLQHMSDEDSPIQFLTSGAGSKAWRGDINPVTINPKLLKFYYDGQGFMSARFT 308
Query: 237 RSEAVVLFYDVHGNILHKWSIPKEPLKAA 265
S+A ++FYDV G ILHKW K+ L ++
Sbjct: 309 HSDAEIVFYDVFGEILHKWVTSKQLLHSS 337
>sp|P09889|PPA5_PIG Tartrate-resistant acid phosphatase type 5 OS=Sus scrofa GN=ACP5
PE=1 SV=4
Length = 340
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 43/281 (15%)
Query: 6 EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVE 64
+ L DF++S GDNFY G+ +D F ++F +++ PSL+ W+ + GNHD+ G+V
Sbjct: 67 KTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVS 126
Query: 65 AQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPG 110
AQ++ ++ RW + I + ++ +F+ ++ FV + E P
Sbjct: 127 AQIA--YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERP- 183
Query: 111 DSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLL 170
R + + L+ + K + A K + +V GH+ + S HG T L+ +LL
Sbjct: 184 ------RNLALARTQLAWIKKQLAAA----KEDYVLVAGHYPVWSIAEHGPTHCLVKQLL 233
Query: 171 PILEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS------KAWRGDRNWWSPEELKL 223
P+L + V Y+ GHDH LQ++ NG+ F+ SG G+ K R N + L+
Sbjct: 234 PLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGY----LRF 289
Query: 224 YYDGQ----GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
++ + GF V++T E V + + G L K +P+
Sbjct: 290 HFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRR 330
>sp|Q05117|PPA5_MOUSE Tartrate-resistant acid phosphatase type 5 OS=Mus musculus GN=Acp5
PE=2 SV=2
Length = 327
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 31/276 (11%)
Query: 6 EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVE 64
+ + DF++S GDNFY G+ D F ++F +++ +L+ WY + GNHD+ G+V
Sbjct: 61 QTMGADFIMSLGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVS 120
Query: 65 AQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFVDTTPFV----DEYFEDPGDSTY 114
AQ++ ++ RW + I I +F+ T + D++
Sbjct: 121 AQIA--YSKISKRWNFPSPYYRLRFKIPRTNITVAIFMLDTVMLCGNSDDFASQQPKMPR 178
Query: 115 DWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILE 174
D GV R + LS L K + A K + +V GH+ I S HG T+ L+ L P+L
Sbjct: 179 DL-GVARTQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLA 231
Query: 175 ENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS---KAWRGDRNWWSPEE-LKLYYDGQ- 228
V Y+ GHDH LQ++ NG+ ++ SG G+ + R R P L+ +Y +
Sbjct: 232 TYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRK--VPNGYLRFHYGSED 289
Query: 229 ---GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
GF V+++ E +++ + G L K S+P+ P
Sbjct: 290 SLGGFTHVEISPKEMTIIYVEASGKSLFKTSLPRRP 325
>sp|O97860|PPA5_RABIT Tartrate-resistant acid phosphatase type 5 OS=Oryctolagus cuniculus
GN=ACP5 PE=2 SV=1
Length = 325
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDY 59
+G + + L F++S GDNFY G+ D F ++F +++ SLQ WY + GNHD+
Sbjct: 54 IGKVVQMLGAHFILSLGDNFYFSGVQSVSDKRFQETFEDVFSDRSLQNVPWYVLAGNHDH 113
Query: 60 RGDVEAQLSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEY 105
G+V AQ++ ++ RW F I ++ +++ ++ F+ +
Sbjct: 114 IGNVSAQIA--YSKVSKRWNFPSPFYRLRFRIPRTNVSVAIYMLDTVTLCGNSNDFLSQQ 171
Query: 106 FEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKEL 165
E P R E L + L ++K + +V GH+ + S HG T L
Sbjct: 172 PERP-----------RNLELARTQLAWLKRHLADAKEDYVLVAGHYPVWSIAEHGPTHCL 220
Query: 166 LLRLLPILEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGG------SKAWRGDRNWWSP 218
+ +L P+L + V Y+ GHDH LQ++ NG+ ++ SG G ++ R N +
Sbjct: 221 VKKLQPLLVKYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSTQHQRSVPNGY-- 278
Query: 219 EELKLYYDGQ----GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
L+ +Y + GF +++T E V + + G L K +PK
Sbjct: 279 --LRFHYGAENSLGGFAYLEITPKEMTVTYMEASGKSLFKTRLPKR 322
>sp|P29288|PPA5_RAT Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus
GN=Acp5 PE=1 SV=1
Length = 327
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 39/275 (14%)
Query: 11 DFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQLSP 69
DF++S GDNFY G+ D F ++F +++ +L+ WY + GNHD+ G+V AQ++
Sbjct: 66 DFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA- 124
Query: 70 VLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDSTYD 115
++ RW + + + I +F+ ++ FV + E P D
Sbjct: 125 -YSKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRD---- 179
Query: 116 WRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE 175
GV R + LS L K + A K + +V GH+ I S HG T+ L+ L P+L
Sbjct: 180 -LGVARTQ--LSWLKKQLAAA----KEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLAA 232
Query: 176 NNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGS---KAWRGDRNWWSPEE-LKLYYDGQ-- 228
V Y+ GHDH LQ++ NG+ ++ SG G+ + R R P L+ +Y +
Sbjct: 233 YGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRK--VPNGYLRFHYGSEDS 290
Query: 229 --GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261
GF V++ E + + + G L K S+P+ P
Sbjct: 291 LGGFTYVEIGSKEMSITYVEASGKSLFKTSLPRRP 325
>sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5
PE=1 SV=3
Length = 325
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 35/275 (12%)
Query: 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQK-QWYNVLGNHDYRGDVEAQ 66
L DF++S GDNFY G+ D F ++F +++ SL+K WY + GNHD+ G+V AQ
Sbjct: 61 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ 120
Query: 67 LSPVLTRKDSRWLCSRSF------ILDAEIAEFVFV--------DTTPFVDEYFEDPGDS 112
++ ++ RW F I ++ +F+ ++ F+ + E P
Sbjct: 121 IA--YSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERP--- 175
Query: 113 TYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPI 172
R V + LS L K + A + + +V GH+ + S HG T L+ +L P+
Sbjct: 176 ----RDVKLARTQLSWLKKQLAAA----REDYVLVAGHYPVWSIAEHGPTHCLVKQLRPL 227
Query: 173 LEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEE--LKLYYDGQ- 228
L V Y+ GHDH LQ++ NG+ ++ SG G+ R+ L+ +Y +
Sbjct: 228 LATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTED 287
Query: 229 ---GFMSVKMTRSEAVVLFYDVHGNILHKWSIPKE 260
GF V+++ E V + + G L K +P+
Sbjct: 288 SLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRR 322
>sp|P33561|RHO_BORBU Transcription termination factor Rho OS=Borrelia burgdorferi
(strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=rho
PE=3 SV=3
Length = 515
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 145 KIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGG 204
KIV G T + EL+ L+ IL ENN+D+ G L S+G FL +
Sbjct: 112 KIVEGLGTNHTIAVTMKKTELIFLLVKILSENNIDVLFTGVLDVL----SDGYGFLRTAS 167
Query: 205 GSKAWRGDRNWWSPEELKLY 224
S G+ + SP +++L+
Sbjct: 168 NSYLSGGNDVYVSPSQIRLF 187
>sp|Q50644|Y2577_MYCTU Uncharacterized protein Rv2577/MT2654 OS=Mycobacterium tuberculosis
GN=Rv2577 PE=4 SV=1
Length = 529
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 103 DEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT 162
D ++D G+S RG Y E L ++ A ++S+ W +V H T S
Sbjct: 304 DVCYQDGGNSYV--RG-YSGGEQRRWLQAELANARRDSEIDWVVVCMHQTAISTADDNNG 360
Query: 163 KELLLRL--LPILEENNVDMYVNGHDH 187
+L +R LP+ ++ VD+ V GH+H
Sbjct: 361 ADLGIRQEWLPLFDQYQVDLVVCGHEH 387
>sp|P57446|Y365_BUCAI UPF0176 protein BU365 OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=BU365 PE=3 SV=1
Length = 324
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 45 SLQKQWYNVLGNHDYRGDVEA---QLSPVLTRKDSRWLCSRSFILDAEIAEFVFVDTTPF 101
S+ K++Y++L Y D+E +++ L + S W +L +I + + D
Sbjct: 70 SVPKKYYSILKKFLYNFDIELNNLRINKSLDNEKSFW------VLCVKIKKKIVQDG--- 120
Query: 102 VDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHH----TIKSAG 157
+ E+F +P + G+Y + E ++ +L D + + ++ +GH IKS
Sbjct: 121 IKEHFFNPNNV-----GIYIQSEQVNSMLNDKKTIFIDMRNSYEYAIGHFENAIEIKSIT 175
Query: 158 HHGVTKELLLRLLPILEENNVDMYVNGHDHC 188
K+ +++L+ + + MY G C
Sbjct: 176 FREQLKK-VIQLMAYAKNKKIVMYCTGGIRC 205
>sp|B8D7Q2|Y359_BUCAT UPF0176 protein BUAPTUC7_359 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain Tuc7) GN=BUAPTUC7_359 PE=3
SV=1
Length = 324
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 19 NFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA---QLSPVLTRKD 75
NFY+ + G ++ S I S+ K++Y++L Y D+E +++ L +
Sbjct: 48 NFYKYNVLGR---IYVAS-EGINAQISVPKKYYSILKKFLYNFDIELNNLRINKSLDNEK 103
Query: 76 SRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDG 135
S W +L +I + + D + E+F +P + G+Y + E ++ +L D
Sbjct: 104 SFW------VLCVKIKKKIVQDG---IKEHFFNPNNV-----GIYIQSEQVNSMLNDKKT 149
Query: 136 ALKNSKAKWKIVVGHH----TIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHC 188
+ + ++ +GH IKS K+ +++L+ + + MY G C
Sbjct: 150 IFIDMRNSYEYAIGHFENAIEIKSITFREQLKK-VIQLMAYAKNKKIVMYCTGGIRC 205
>sp|B8D9F0|Y358_BUCA5 UPF0176 protein BUAP5A_358 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain 5A) GN=BUAP5A_358 PE=3 SV=1
Length = 324
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 19 NFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA---QLSPVLTRKD 75
NFY+ + G ++ S I S+ K++Y++L Y D+E +++ L +
Sbjct: 48 NFYKYNVLGR---IYVAS-EGINAQISVPKKYYSILKKFLYNFDIELNNLRINKSLDNEK 103
Query: 76 SRWLCSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDG 135
S W +L +I + + D + E+F +P + G+Y + E ++ +L D
Sbjct: 104 SFW------VLCVKIKKKIVQDG---IKEHFFNPNNV-----GIYIQSEQVNSMLNDKKT 149
Query: 136 ALKNSKAKWKIVVGHH----TIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHC 188
+ + ++ +GH IKS K+ +++L+ + + MY G C
Sbjct: 150 IFIDMRNSYEYAIGHFENAIEIKSITFREQLKK-VIQLMAYAKNKKIVMYCTGGIRC 205
>sp|Q75DS8|FEN1_ASHGO Flap endonuclease 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=FEN1 PE=3 SV=2
Length = 378
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 45/193 (23%)
Query: 88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIV 147
AE + + + P+VD PG++ + ++ + + +D+D + +
Sbjct: 137 AEAKKLLGLMGIPYVDA----PGEAEAQCAELAKKGKVFAAASEDMDTLCYRTP----YL 188
Query: 148 VGHHTIKSAGH---HGVTKELLLRLLPILEENNVDMYVN-GHDHC-----------LQHI 192
+ H T A H + EL+L+ L + +E VD+ + G D+C L+ I
Sbjct: 189 LRHLTFSEARKEPIHEIDTELVLQGLGLSQEQLVDLGIMLGCDYCESIKGVGPVTALKLI 248
Query: 193 SSNG-----IEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDV 247
+G +EF++SGG +K W+ NW E L F+ + +E V L
Sbjct: 249 KEHGSLENIVEFISSGGNAK-WKVPENWPYKEARAL------FLQPDVLDAEGVSL---- 297
Query: 248 HGNILHKWSIPKE 260
KW PKE
Sbjct: 298 ------KWEEPKE 304
>sp|A9FGS5|ATP6_SORC5 ATP synthase subunit a OS=Sorangium cellulosum (strain So ce56)
GN=atpB PE=3 SV=1
Length = 255
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 125 YLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNV 178
+L+ LL + G +N++ K +GHHT+ G + LL+ +L +L + V
Sbjct: 7 FLTYLLAQLPGLRENARNIGKTFIGHHTVDYRGTEPIFMSLLIMVLFVLLASEV 60
>sp|Q6PXP0|PA2_ANUPH Phospholipase A2 phaiodactylipin OS=Anuroctonus phaiodactylus PE=1
SV=2
Length = 157
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 186 DHCLQHISSN-GIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLF 244
DHCL+ IS+N + GG WR W++ +LY + K R EA
Sbjct: 92 DHCLKEISNNVTTDIRQKGGAENVWRFYFQWYNANCYRLYCKDE-----KSARDEACTNQ 146
Query: 245 YDV 247
Y V
Sbjct: 147 YAV 149
>sp|P20301|APRN_ENTHI Antigenic protein NP1 (Fragment) OS=Entamoeba histolytica PE=4 SV=1
Length = 640
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 16 TGDNFYEDG-------LTGEEDPAFLDSFTSIY------TAPSLQKQWYNVLGNHDYRGD 62
+G N+ DG L GE D L S+ +I T +L K +Y + ++Y G+
Sbjct: 252 SGWNYVSDGYSTIYKILNGENDQPHLRSYVNIAHAFGTDTLIALVKSYYGLWYENNYEGE 311
Query: 63 VEAQ---------LSPVLTRKDSRWLCS 81
+ L+ + T++D+R+LCS
Sbjct: 312 YSIKRDSTSAFCLLAAIATKRDTRYLCS 339
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 179 DMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPE 219
++ + GH C+Q++ S I L GGG R W+ E
Sbjct: 270 NLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYE 310
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 179 DMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPE 219
++ + GH C+Q++ S I L GGG R W+ E
Sbjct: 270 NLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYE 310
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,498,371
Number of Sequences: 539616
Number of extensions: 5074825
Number of successful extensions: 10692
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 10656
Number of HSP's gapped (non-prelim): 28
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)