Query 024595
Match_columns 265
No_of_seqs 134 out of 1621
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 05:53:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024595.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024595hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2679 Purple (tartrate-resis 100.0 1.3E-51 2.9E-56 320.6 19.3 263 1-263 67-333 (336)
2 PTZ00422 glideosome-associated 100.0 4.9E-43 1.1E-47 294.4 23.4 244 1-262 49-332 (394)
3 cd07378 MPP_ACP5 Homo sapiens 100.0 7.4E-37 1.6E-41 253.9 22.4 242 2-249 25-277 (277)
4 cd00839 MPP_PAPs purple acid p 100.0 2.3E-33 4.9E-38 235.0 20.7 231 8-259 32-294 (294)
5 PLN02533 probable purple acid 100.0 9.2E-29 2E-33 214.8 21.0 231 5-262 161-421 (427)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 1.1E-28 2.4E-33 203.2 16.5 203 9-246 49-261 (262)
7 KOG1378 Purple acid phosphatas 99.9 1.2E-24 2.5E-29 183.9 20.8 228 7-261 172-439 (452)
8 PRK11148 cyclic 3',5'-adenosin 99.9 1.1E-24 2.4E-29 180.4 15.7 205 8-249 54-263 (275)
9 cd07402 MPP_GpdQ Enterobacter 99.9 3.9E-25 8.4E-30 179.9 12.2 196 9-239 40-239 (240)
10 cd07396 MPP_Nbla03831 Homo sap 99.9 1.4E-24 3.1E-29 178.9 14.3 213 6-242 37-266 (267)
11 cd07401 MPP_TMEM62_N Homo sapi 99.9 3.7E-22 7.9E-27 163.3 12.1 182 3-199 27-223 (256)
12 cd07399 MPP_YvnB Bacillus subt 99.8 1.4E-20 3E-25 150.0 10.7 129 4-194 30-166 (214)
13 cd08163 MPP_Cdc1 Saccharomyces 99.8 1.8E-19 3.9E-24 146.7 10.8 171 4-194 40-233 (257)
14 cd00842 MPP_ASMase acid sphing 99.8 4E-19 8.6E-24 148.9 12.5 174 9-194 68-266 (296)
15 TIGR03729 acc_ester putative p 99.8 2.8E-18 6E-23 139.3 11.6 184 5-203 28-236 (239)
16 cd07393 MPP_DR1119 Deinococcus 99.8 2.4E-18 5.3E-23 138.8 10.9 181 9-209 41-230 (232)
17 TIGR03767 P_acnes_RR metalloph 99.8 2.2E-17 4.8E-22 141.8 17.2 97 82-194 292-397 (496)
18 cd07392 MPP_PAE1087 Pyrobaculu 99.7 1.8E-17 3.8E-22 129.7 10.8 165 5-202 19-187 (188)
19 PF09423 PhoD: PhoD-like phosp 99.7 4.8E-17 1E-21 143.9 11.1 239 4-244 127-453 (453)
20 cd07383 MPP_Dcr2 Saccharomyces 99.7 1.7E-17 3.6E-22 131.1 6.8 139 3-206 35-193 (199)
21 cd07388 MPP_Tt1561 Thermus the 99.6 4.5E-15 9.8E-20 118.0 13.7 183 5-241 27-222 (224)
22 COG3540 PhoD Phosphodiesterase 99.6 2.3E-15 5E-20 127.2 10.5 239 3-244 162-490 (522)
23 PF00149 Metallophos: Calcineu 99.6 1.5E-16 3.2E-21 122.5 2.6 63 127-189 134-200 (200)
24 COG1409 Icc Predicted phosphoh 99.6 2.3E-14 5.1E-19 120.0 15.5 167 5-199 29-205 (301)
25 KOG1432 Predicted DNA repair e 99.6 2.5E-14 5.4E-19 116.4 14.6 189 2-206 93-329 (379)
26 cd07404 MPP_MS158 Microscilla 99.6 1.1E-14 2.5E-19 111.6 10.0 60 143-202 97-162 (166)
27 cd00840 MPP_Mre11_N Mre11 nucl 99.5 2.7E-14 5.8E-19 114.7 9.8 169 4-203 36-215 (223)
28 TIGR03768 RPA4764 metallophosp 99.5 3.6E-13 7.8E-18 115.0 16.4 100 83-192 294-414 (492)
29 cd07400 MPP_YydB Bacillus subt 99.5 3.5E-14 7.7E-19 106.3 8.3 59 146-204 81-144 (144)
30 cd07385 MPP_YkuE_C Bacillus su 99.5 3.3E-13 7.1E-18 108.5 10.9 141 5-194 28-171 (223)
31 PRK11340 phosphodiesterase Yae 99.4 3.8E-12 8.2E-17 105.1 9.5 139 5-193 76-218 (271)
32 cd07394 MPP_Vps29 Homo sapiens 99.3 3.7E-10 8.1E-15 87.3 17.0 80 168-257 97-176 (178)
33 cd08166 MPP_Cdc1_like_1 unchar 99.3 2.6E-11 5.6E-16 93.7 9.1 112 5-194 38-152 (195)
34 cd07397 MPP_DevT Myxococcus xa 99.3 4.1E-11 8.8E-16 95.6 10.5 180 4-204 20-233 (238)
35 PF12850 Metallophos_2: Calcin 99.3 1.3E-11 2.8E-16 93.5 7.2 76 143-238 81-156 (156)
36 PF14582 Metallophos_3: Metall 99.3 2.8E-11 6.2E-16 93.7 8.7 197 3-243 26-253 (255)
37 COG1768 Predicted phosphohydro 99.3 9.5E-11 2.1E-15 87.1 10.8 167 10-204 44-219 (230)
38 cd08165 MPP_MPPE1 human MPPE1 99.3 1.8E-11 3.9E-16 92.5 7.2 45 146-206 107-152 (156)
39 cd07384 MPP_Cdc1_like Saccharo 99.2 2.3E-11 5.1E-16 93.3 7.5 57 3-61 39-101 (171)
40 cd00841 MPP_YfcE Escherichia c 99.2 1.9E-10 4.2E-15 87.0 12.0 79 144-244 76-154 (155)
41 cd00838 MPP_superfamily metall 99.2 3.6E-11 7.7E-16 87.7 7.6 36 166-201 92-129 (131)
42 TIGR00583 mre11 DNA repair pro 99.2 4.2E-10 9.1E-15 97.1 14.0 100 142-258 200-304 (405)
43 cd07379 MPP_239FB Homo sapiens 99.1 3.2E-10 7E-15 83.8 9.1 59 144-202 69-134 (135)
44 TIGR00040 yfcE phosphoesterase 99.1 2.5E-09 5.4E-14 81.2 13.6 78 144-241 79-156 (158)
45 PHA02546 47 endonuclease subun 99.1 9.2E-10 2E-14 93.8 11.4 55 3-60 33-89 (340)
46 cd07403 MPP_TTHA0053 Thermus t 99.1 9.7E-10 2.1E-14 80.4 8.5 27 167-193 81-107 (129)
47 COG2129 Predicted phosphoester 99.1 5.6E-09 1.2E-13 81.3 12.8 193 3-245 24-224 (226)
48 cd08164 MPP_Ted1 Saccharomyces 99.0 2.7E-10 5.9E-15 88.0 4.9 54 5-61 40-112 (193)
49 PRK09453 phosphodiesterase; Pr 99.0 9.3E-09 2E-13 80.0 13.5 65 175-257 116-181 (182)
50 cd07389 MPP_PhoD Bacillus subt 98.9 3.6E-09 7.9E-14 85.3 8.1 57 6-62 26-104 (228)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.9 8.6E-09 1.9E-13 83.2 10.1 38 168-205 176-217 (231)
52 COG1408 Predicted phosphohydro 98.9 1.6E-08 3.4E-13 83.6 10.6 52 5-62 69-120 (284)
53 COG0420 SbcD DNA repair exonuc 98.9 1.1E-08 2.4E-13 89.1 9.5 55 3-61 34-89 (390)
54 COG0622 Predicted phosphoester 98.9 2.3E-07 4.9E-12 70.8 15.1 87 143-249 81-167 (172)
55 PRK10966 exonuclease subunit S 98.9 2.9E-08 6.3E-13 86.4 11.6 65 177-256 220-289 (407)
56 PRK05340 UDP-2,3-diacylglucosa 98.9 1.4E-08 3E-13 82.6 9.0 39 167-205 177-219 (241)
57 cd07398 MPP_YbbF-LpxH Escheric 98.8 1E-08 2.2E-13 82.1 5.9 39 166-204 178-216 (217)
58 cd07410 MPP_CpdB_N Escherichia 98.7 1.4E-07 3E-12 78.4 11.5 73 129-203 171-245 (277)
59 cd07406 MPP_CG11883_N Drosophi 98.7 1.5E-06 3.3E-11 71.3 16.5 56 137-205 167-223 (257)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.7 2E-07 4.4E-12 76.2 10.0 164 8-191 27-230 (262)
61 TIGR00619 sbcd exonuclease Sbc 98.5 1.4E-07 3E-12 77.2 6.0 54 4-61 34-89 (253)
62 KOG3770 Acid sphingomyelinase 98.5 5E-07 1.1E-11 79.6 8.2 172 5-192 205-407 (577)
63 COG2908 Uncharacterized protei 98.5 6.3E-08 1.4E-12 76.2 1.6 40 167-206 177-216 (237)
64 cd07411 MPP_SoxB_N Thermus the 98.4 1.9E-05 4.2E-10 65.1 14.5 57 134-203 176-236 (264)
65 cd00845 MPP_UshA_N_like Escher 98.3 1.4E-05 3.1E-10 65.4 12.1 51 140-203 169-222 (252)
66 cd07408 MPP_SA0022_N Staphyloc 98.2 5.3E-05 1.2E-09 62.2 14.4 61 134-201 164-228 (257)
67 KOG3662 Cell division control 98.2 1.2E-06 2.6E-11 74.7 4.5 91 7-102 91-184 (410)
68 cd07412 MPP_YhcR_N Bacillus su 98.2 2.3E-05 4.9E-10 65.5 12.0 73 134-206 184-261 (288)
69 cd07386 MPP_DNA_pol_II_small_a 98.0 3.2E-05 7E-10 63.0 8.8 32 177-208 191-222 (243)
70 KOG2310 DNA repair exonuclease 98.0 2.9E-05 6.3E-10 67.7 8.1 86 144-244 212-299 (646)
71 cd07407 MPP_YHR202W_N Saccharo 98.0 0.00028 6.1E-09 58.6 13.4 70 131-206 177-249 (282)
72 KOG3325 Membrane coat complex 97.9 0.00022 4.7E-09 51.9 10.6 102 142-259 78-182 (183)
73 PRK04036 DNA polymerase II sma 97.9 8.6E-05 1.9E-09 66.7 10.2 30 178-207 441-470 (504)
74 KOG2863 RNA lariat debranching 97.9 6.4E-05 1.4E-09 62.5 8.4 171 8-191 29-232 (456)
75 cd07391 MPP_PF1019 Pyrococcus 97.9 7.3E-06 1.6E-10 63.1 2.4 55 3-61 35-89 (172)
76 cd07405 MPP_UshA_N Escherichia 97.9 0.0011 2.4E-08 55.3 15.3 55 137-191 169-223 (285)
77 cd07424 MPP_PrpA_PrpB PrpA and 97.8 9.9E-05 2.1E-09 58.6 7.6 31 177-207 168-198 (207)
78 PRK09419 bifunctional 2',3'-cy 97.7 0.0006 1.3E-08 67.6 12.6 62 140-206 837-899 (1163)
79 TIGR00282 metallophosphoestera 97.7 0.003 6.6E-08 51.8 14.5 62 142-213 144-208 (266)
80 PRK09558 ushA bifunctional UDP 97.6 0.002 4.3E-08 58.9 14.7 55 133-190 200-258 (551)
81 COG5555 Cytolysin, a secreted 97.6 0.00015 3.2E-09 58.6 6.4 213 10-261 127-390 (392)
82 cd07409 MPP_CD73_N CD73 ecto-5 97.6 0.0011 2.5E-08 55.1 11.7 41 137-190 178-219 (281)
83 cd07382 MPP_DR1281 Deinococcus 97.5 0.0073 1.6E-07 49.4 14.4 61 141-211 140-203 (255)
84 TIGR00024 SbcD_rel_arch putati 97.4 8.5E-05 1.8E-09 59.6 1.8 50 4-60 53-102 (225)
85 COG0737 UshA 5'-nucleotidase/2 97.3 0.0044 9.5E-08 56.3 12.5 61 142-206 204-269 (517)
86 PRK09419 bifunctional 2',3'-cy 97.3 0.0037 7.9E-08 62.1 12.4 54 135-191 228-282 (1163)
87 cd07380 MPP_CWF19_N Schizosacc 97.3 0.00094 2E-08 49.9 6.2 46 6-58 23-68 (150)
88 PRK09418 bifunctional 2',3'-cy 97.3 0.009 1.9E-07 56.4 13.9 67 136-206 239-306 (780)
89 PF14008 Metallophos_C: Iron/z 97.2 0.0018 3.9E-08 40.6 5.9 59 196-255 2-62 (62)
90 PRK11907 bifunctional 2',3'-cy 97.1 0.011 2.4E-07 56.0 12.7 52 135-190 303-355 (814)
91 COG1311 HYS2 Archaeal DNA poly 97.0 0.025 5.5E-07 49.5 13.1 31 177-207 418-448 (481)
92 COG4186 Predicted phosphoester 97.0 0.0012 2.6E-08 48.6 4.2 39 144-188 109-147 (186)
93 TIGR01530 nadN NAD pyrophospha 97.0 0.0096 2.1E-07 54.4 11.0 43 135-190 176-219 (550)
94 COG1407 Predicted ICC-like pho 97.0 0.00052 1.1E-08 54.6 2.4 55 3-61 57-111 (235)
95 TIGR01390 CycNucDiestase 2',3' 96.9 0.019 4.1E-07 53.2 12.7 51 136-190 190-241 (626)
96 cd08162 MPP_PhoA_N Synechococc 96.9 0.027 5.9E-07 47.6 12.1 45 134-190 200-245 (313)
97 cd07390 MPP_AQ1575 Aquifex aeo 96.8 0.0013 2.7E-08 50.4 3.7 42 9-61 42-83 (168)
98 PHA02239 putative protein phos 96.7 0.00069 1.5E-08 54.7 1.2 43 10-59 30-72 (235)
99 PRK00166 apaH diadenosine tetr 96.4 0.0019 4.1E-08 53.4 2.1 43 8-60 27-69 (275)
100 KOG4419 5' nucleotidase [Nucle 96.4 0.029 6.3E-07 50.3 9.4 60 128-193 212-273 (602)
101 cd07422 MPP_ApaH Escherichia c 96.2 0.0029 6.2E-08 51.8 2.3 43 8-60 25-67 (257)
102 cd07425 MPP_Shelphs Shewanella 95.9 0.0041 8.9E-08 49.3 1.7 25 168-192 158-182 (208)
103 PRK09420 cpdB bifunctional 2', 95.8 0.18 4E-06 47.0 12.2 51 135-190 212-264 (649)
104 cd00144 MPP_PPP_family phospho 95.8 0.0059 1.3E-07 48.9 2.1 46 8-60 23-68 (225)
105 cd07387 MPP_PolD2_C PolD2 (DNA 95.7 0.17 3.7E-06 41.4 10.4 55 47-101 94-154 (257)
106 cd07413 MPP_PA3087 Pseudomonas 95.5 0.0095 2.1E-07 47.8 2.5 43 9-59 33-75 (222)
107 PF13277 YmdB: YmdB-like prote 95.3 0.27 5.8E-06 39.8 9.9 169 3-210 21-200 (253)
108 PRK11439 pphA serine/threonine 94.8 0.015 3.3E-07 46.5 1.7 29 177-205 179-207 (218)
109 PRK09968 serine/threonine-spec 94.7 0.018 3.9E-07 46.1 1.8 29 177-205 179-207 (218)
110 cd07421 MPP_Rhilphs Rhilph pho 94.5 0.023 5.1E-07 47.1 2.2 46 9-59 34-79 (304)
111 PRK13625 bis(5'-nucleosyl)-tet 94.5 0.019 4.1E-07 46.8 1.6 42 10-59 37-78 (245)
112 TIGR00668 apaH bis(5'-nucleosy 94.5 0.021 4.5E-07 47.1 1.7 42 8-59 27-68 (279)
113 cd07423 MPP_PrpE Bacillus subt 94.4 0.023 5E-07 45.9 1.8 29 177-205 181-209 (234)
114 PF09587 PGA_cap: Bacterial ca 93.7 1.7 3.7E-05 35.5 11.6 62 130-194 170-233 (250)
115 COG1692 Calcineurin-like phosp 93.3 3.7 8E-05 33.2 15.2 74 130-213 129-207 (266)
116 smart00854 PGA_cap Bacterial c 92.4 1.1 2.5E-05 36.2 8.7 51 141-194 172-222 (239)
117 cd07381 MPP_CapA CapA and rela 92.4 1.2 2.6E-05 36.0 8.8 50 142-194 175-224 (239)
118 KOG3947 Phosphoesterases [Gene 91.7 2.4 5.3E-05 34.7 9.4 53 141-194 211-269 (305)
119 cd07420 MPP_RdgC Drosophila me 88.9 0.22 4.9E-06 42.1 1.5 24 167-190 254-277 (321)
120 cd07416 MPP_PP2B PP2B, metallo 87.7 0.35 7.5E-06 40.8 1.9 23 167-189 223-245 (305)
121 smart00156 PP2Ac Protein phosp 87.4 0.36 7.8E-06 40.0 1.9 22 167-188 201-222 (271)
122 cd07415 MPP_PP2A_PP4_PP6 PP2A, 86.0 0.36 7.8E-06 40.2 1.2 24 167-190 215-238 (285)
123 cd07390 MPP_AQ1575 Aquifex aeo 85.7 0.91 2E-05 34.5 3.2 36 142-193 106-141 (168)
124 cd07419 MPP_Bsu1_C Arabidopsis 85.6 0.47 1E-05 40.1 1.7 20 167-186 243-262 (311)
125 cd07417 MPP_PP5_C PP5, C-termi 85.2 0.42 9.1E-06 40.5 1.2 24 167-190 234-257 (316)
126 PTZ00480 serine/threonine-prot 84.9 0.63 1.4E-05 39.4 2.1 23 167-189 232-254 (320)
127 cd07418 MPP_PP7 PP7, metalloph 84.8 0.52 1.1E-05 40.8 1.6 20 167-186 274-293 (377)
128 PTZ00244 serine/threonine-prot 84.2 0.48 1E-05 39.7 1.1 23 167-189 225-247 (294)
129 cd07414 MPP_PP1_PPKL PP1, PPKL 83.6 0.6 1.3E-05 39.1 1.4 24 167-190 223-246 (293)
130 PTZ00239 serine/threonine prot 82.9 0.72 1.6E-05 38.8 1.6 24 167-190 216-239 (303)
131 PF04042 DNA_pol_E_B: DNA poly 81.8 0.45 9.8E-06 37.6 0.1 56 7-62 29-93 (209)
132 PRK09968 serine/threonine-spec 80.7 2.3 4.9E-05 34.0 3.7 41 7-59 40-80 (218)
133 COG1168 MalY Bifunctional PLP- 80.2 7.4 0.00016 33.6 6.6 62 130-194 147-217 (388)
134 KOG0374 Serine/threonine speci 69.0 4 8.7E-05 34.8 2.4 26 167-192 234-259 (331)
135 PRK11439 pphA serine/threonine 65.1 7 0.00015 31.1 3.0 39 9-59 44-82 (218)
136 PHA03008 hypothetical protein; 64.2 20 0.00043 27.9 5.0 54 145-201 163-219 (234)
137 cd07425 MPP_Shelphs Shewanella 63.6 16 0.00035 28.9 4.8 49 8-60 31-80 (208)
138 KOG0372 Serine/threonine speci 62.8 3 6.5E-05 33.6 0.5 42 13-61 73-115 (303)
139 PRK10799 metal-binding protein 60.6 13 0.00029 30.2 3.9 46 145-191 58-103 (247)
140 PF03808 Glyco_tran_WecB: Glyc 60.5 38 0.00082 25.8 6.2 49 130-185 61-109 (172)
141 PF06874 FBPase_2: Firmicute f 60.3 2.7 5.8E-05 38.5 -0.2 42 170-211 512-562 (640)
142 COG3855 Fbp Uncharacterized pr 58.8 2.8 6.2E-05 36.9 -0.3 48 2-60 183-230 (648)
143 TIGR03413 GSH_gloB hydroxyacyl 58.6 7.8 0.00017 31.6 2.2 45 12-60 120-167 (248)
144 PF02350 Epimerase_2: UDP-N-ac 57.2 3.9 8.5E-05 35.2 0.3 40 2-55 60-99 (346)
145 cd07423 MPP_PrpE Bacillus subt 53.6 18 0.0004 29.0 3.6 43 9-59 37-79 (234)
146 KOG0373 Serine/threonine speci 52.6 6 0.00013 31.4 0.6 42 13-61 76-118 (306)
147 COG2843 PgsA Putative enzyme o 50.0 42 0.0009 29.2 5.3 52 140-194 222-273 (372)
148 PF01784 NIF3: NIF3 (NGG1p int 48.4 23 0.0005 28.7 3.5 44 145-190 55-100 (241)
149 COG0381 WecB UDP-N-acetylgluco 46.8 9.7 0.00021 33.0 1.1 44 141-187 203-247 (383)
150 PF07819 PGAP1: PGAP1-like pro 45.7 64 0.0014 25.8 5.6 30 122-151 62-93 (225)
151 PRK10241 hydroxyacylglutathion 45.1 15 0.00034 29.9 2.0 44 13-60 122-168 (251)
152 cd06533 Glyco_transf_WecG_TagA 42.5 1.1E+02 0.0023 23.3 6.2 48 130-184 59-106 (171)
153 PRK14347 lipoate-protein ligas 41.6 71 0.0015 25.4 5.1 39 123-161 14-52 (209)
154 PF01012 ETF: Electron transfe 39.5 1.6E+02 0.0034 21.9 8.9 98 130-258 47-149 (164)
155 PRK14341 lipoate-protein ligas 38.9 79 0.0017 25.2 5.0 38 124-161 17-54 (213)
156 PF05582 Peptidase_U57: YabG p 38.9 36 0.00079 28.2 3.1 25 163-187 140-165 (287)
157 TIGR03568 NeuC_NnaA UDP-N-acet 36.1 19 0.0004 31.3 1.2 43 3-59 87-130 (365)
158 PF13285 DUF4073: Domain of un 35.0 1.9E+02 0.0041 21.4 6.3 30 231-260 54-84 (158)
159 TIGR02855 spore_yabG sporulati 34.3 36 0.00078 28.1 2.4 25 164-188 140-165 (283)
160 TIGR00486 YbgI_SA1388 dinuclea 34.2 52 0.0011 26.8 3.4 44 145-190 59-103 (249)
161 COG0488 Uup ATPase components 33.3 37 0.00081 31.1 2.7 26 125-151 184-209 (530)
162 PF13860 FlgD_ig: FlgD Ig-like 32.8 1.1E+02 0.0025 19.8 4.3 26 234-259 19-46 (81)
163 KOG0257 Kynurenine aminotransf 32.5 1.4E+02 0.003 26.4 5.8 75 130-208 162-246 (420)
164 COG1922 WecG Teichoic acid bio 31.1 2E+02 0.0044 23.6 6.2 48 130-184 121-168 (253)
165 PF01764 Lipase_3: Lipase (cla 28.7 66 0.0014 23.0 3.0 22 166-187 51-73 (140)
166 KOG0375 Serine-threonine phosp 27.3 45 0.00098 28.7 2.0 14 47-60 146-159 (517)
167 KOG0371 Serine/threonine prote 24.8 42 0.00091 27.6 1.3 13 48-60 119-131 (319)
168 PRK14345 lipoate-protein ligas 24.7 1.7E+02 0.0037 23.7 4.8 37 124-160 24-60 (234)
169 PF09313 DUF1971: Domain of un 23.7 1.2E+02 0.0027 20.0 3.2 36 226-261 22-57 (82)
170 PF13258 DUF4049: Domain of un 22.1 66 0.0014 26.0 1.9 17 45-61 125-141 (318)
171 PF02078 Synapsin: Synapsin, N 21.7 51 0.0011 22.8 1.1 18 3-20 66-83 (105)
172 PRK14348 lipoate-protein ligas 21.1 2.3E+02 0.0051 22.7 4.8 39 124-162 15-58 (221)
No 1
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-51 Score=320.63 Aligned_cols=263 Identities=70% Similarity=1.171 Sum_probs=243.1
Q ss_pred CcccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee
Q 024595 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC 80 (265)
Q Consensus 1 ~~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~ 80 (265)
|++++++++.||||-+||++|++|+.++.|+++.+.|+.++..++|+.|||.|.||||++++..+++.+.+++.+.||.+
T Consensus 67 mg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c 146 (336)
T KOG2679|consen 67 MGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWIC 146 (336)
T ss_pred HHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceec
Confidence 57788899999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC
Q 024595 81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG 160 (265)
Q Consensus 81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~ 160 (265)
++.|+.....+.++++|+..+...+........++|.+..|+..+...++.||+..|+++.++|+||+.|||+.+.+.||
T Consensus 147 ~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG 226 (336)
T KOG2679|consen 147 PRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKASRAKWKIVVGHHPIKSAGHHG 226 (336)
T ss_pred ccHHhhcceeeeeeccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHHhhcceEEEecccceehhhccC
Confidence 99998887778999999999887766555455688888888888899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhCCccEEEeCCcccceEEee--CCeEEEEeCCCCCCCCC-CCC-CCCCccceeeecCCCeEEEEEe
Q 024595 161 VTKELLLRLLPILEENNVDMYVNGHDHCLQHISS--NGIEFLTSGGGSKAWRG-DRN-WWSPEELKLYYDGQGFMSVKMT 236 (265)
Q Consensus 161 ~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~--~~~~~i~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~gy~~~~v~ 236 (265)
.+.+++++|+++|+.++|+++++||+|+.++... .+|.|+++|+|++.|++ ..+ ++++...+|.++..||+.++++
T Consensus 227 ~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~is 306 (336)
T KOG2679|consen 227 PTKELEKQLLPILEANGVDLYINGHDHCLQHISSPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEIS 306 (336)
T ss_pred ChHHHHHHHHHHHHhcCCcEEEecchhhhhhccCCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEEe
Confidence 9999999999999999999999999999998866 78999999999999987 554 4678889999999999999999
Q ss_pred CCeEEEEEEecCCCeEEEEEccCCCcc
Q 024595 237 RSEAVVLFYDVHGNILHKWSIPKEPLK 263 (265)
Q Consensus 237 ~~~i~~~~~~~~g~~~~~~~i~~~~~~ 263 (265)
..++++.||+..|+.++.|...+|...
T Consensus 307 ~~e~~vvfyD~~G~~Lhk~~t~kr~~~ 333 (336)
T KOG2679|consen 307 HSEARVVFYDVSGKVLHKWSTSKRSLY 333 (336)
T ss_pred cceeEEEEEeccCceEEEeeccccccc
Confidence 999999999999999999998888654
No 2
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=4.9e-43 Score=294.40 Aligned_cols=244 Identities=23% Similarity=0.454 Sum_probs=200.6
Q ss_pred CcccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCC--CCCceEEcCCCcccCCCcccccccccc------
Q 024595 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPS--LQKQWYNVLGNHDYRGDVEAQLSPVLT------ 72 (265)
Q Consensus 1 ~~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~--l~~p~~~i~GNHD~~~~~~~~~~~~~~------ 72 (265)
|++.+++.++||||.+||++ .+|+.+.+|++|...|+.++..++ +++||++++||||+.++..+++.+...
T Consensus 49 M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~ 127 (394)
T PTZ00422 49 LKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGH 127 (394)
T ss_pred HHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccc
Confidence 56788899999999999999 899999999999999999998877 899999999999999988887753111
Q ss_pred -----------ccCCCceeeeeeE-e----c-------------CceEEEEEEeCccccccccCCCCCCCCCccccchhh
Q 024595 73 -----------RKDSRWLCSRSFI-L----D-------------AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRK 123 (265)
Q Consensus 73 -----------~~~~~~~~~~~y~-~----~-------------~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (265)
..+++|.+|..|+ + . ...+.||++||..+...+ .+.
T Consensus 128 ~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~---------~~~------ 192 (394)
T PTZ00422 128 GQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSF---------PYK------ 192 (394)
T ss_pred cccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEEEEECchhcccC---------Ccc------
Confidence 1257899885332 2 1 133899999998765321 111
Q ss_pred hhHHHHHHHHHHHhhc--CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEE
Q 024595 124 EYLSDLLKDVDGALKN--SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLT 201 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~--~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~ 201 (265)
...+.|++||+++|+. +.++|+||+.|||+++.+.|+...++...|.++|++++|+++++||.|+.++....++.|++
T Consensus 193 ~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL~ky~VdlYisGHDH~lq~i~~~gt~yIv 272 (394)
T PTZ00422 193 KVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLLKDAQVDLYISGYDRNMEVLTDEGTAHIN 272 (394)
T ss_pred ccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCCHHHHHHHHHHHHHcCcCEEEEccccceEEecCCCceEEE
Confidence 1234689999999964 35789999999999999988877788889999999999999999999999999889999999
Q ss_pred eCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe-cCCCeEEEEEccCCCc
Q 024595 202 SGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNILHKWSIPKEPL 262 (265)
Q Consensus 202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~ 262 (265)
+|+||..++... ...+...|.....||+.++++.+++++++++ .+|++++++++++++.
T Consensus 273 SGaGs~~~~~~~--~~~~~s~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~~ 332 (394)
T PTZ00422 273 CGSGGNSGRKSI--MKNSKSLFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKKR 332 (394)
T ss_pred eCccccccCCCC--CCCCCcceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccch
Confidence 999998775432 1244567777899999999999999999998 8999999998877643
No 3
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=100.00 E-value=7.4e-37 Score=253.92 Aligned_cols=242 Identities=40% Similarity=0.671 Sum_probs=174.9
Q ss_pred cccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceee
Q 024595 2 GLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS 81 (265)
Q Consensus 2 ~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~ 81 (265)
.+.+++.+|||||++||++|++|.....+.++.+.|..++....+++|+++++||||+..+..+...+.......+|..|
T Consensus 25 ~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~ 104 (277)
T cd07378 25 AKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP 104 (277)
T ss_pred HHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccCc
Confidence 34566689999999999999888766555666666666654334689999999999998764443332111113445444
Q ss_pred -eeeEecCc------eEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccc
Q 024595 82 -RSFILDAE------IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIK 154 (265)
Q Consensus 82 -~~y~~~~~------~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~ 154 (265)
.+|++..+ +++||+|||..+...+.... ... ......+.++|++||++.|+++.++|+||++|||++
T Consensus 105 ~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~--~~~----~~~~~~~~~~Q~~wL~~~L~~~~~~~~iv~~H~P~~ 178 (277)
T cd07378 105 AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA--SPY----GPPNGKLAEEQLAWLEKTLAASTADWKIVVGHHPIY 178 (277)
T ss_pred chheEEEeecCCCCCEEEEEEEeChhHcCcccccc--ccc----cCcchhhHHHHHHHHHHHHHhcCCCeEEEEeCccce
Confidence 34556544 79999999998643221100 000 011345778999999999999877999999999998
Q ss_pred cCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeC--CeEEEEeCCCCCCCCCCCCCCC--CccceeeecCCCe
Q 024595 155 SAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSN--GIEFLTSGGGSKAWRGDRNWWS--PEELKLYYDGQGF 230 (265)
Q Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~--~~~~i~~g~~~~~~~~~~~~~~--~~~~~~~~~~~gy 230 (265)
+...++.....++.|.+++++++|++||+||.|........ ++.|+++|+++........... +....+.....||
T Consensus 179 ~~~~~~~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy 258 (277)
T cd07378 179 SSGEHGPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGF 258 (277)
T ss_pred eCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecCCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCE
Confidence 77655444556788999999999999999999999988876 9999999999887654321101 0112344578999
Q ss_pred EEEEEeCCeEEEEEEecCC
Q 024595 231 MSVKMTRSEAVVLFYDVHG 249 (265)
Q Consensus 231 ~~~~v~~~~i~~~~~~~~g 249 (265)
.++++++++++++|++.+|
T Consensus 259 ~~i~v~~~~l~~~~~~~~g 277 (277)
T cd07378 259 AYLELTKEELTVRFYDADG 277 (277)
T ss_pred EEEEEecCEEEEEEECCCC
Confidence 9999999999999998876
No 4
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2.3e-33 Score=234.99 Aligned_cols=231 Identities=16% Similarity=0.170 Sum_probs=161.2
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccc------cccCCCceee
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVL------TRKDSRWLCS 81 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~------~~~~~~~~~~ 81 (265)
.+|||||++||++|..+...+ .+|...++. +......+|+++++||||............. .........+
T Consensus 32 ~~~d~vl~~GDl~~~~~~~~~--~~~~~~~~~-~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (294)
T cd00839 32 GNYDAILHVGDLAYADGYNNG--SRWDTFMRQ-IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSN 108 (294)
T ss_pred CCccEEEEcCchhhhcCCccc--hhHHHHHHH-HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCC
Confidence 689999999999987654321 233322222 1111136899999999999764332211100 0000111123
Q ss_pred eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCC---CeEEEEeccccccCCC
Q 024595 82 RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKA---KWKIVVGHHTIKSAGH 158 (265)
Q Consensus 82 ~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~---~~~iv~~H~P~~~~~~ 158 (265)
.+|+++.++++||+|||..... ......+|++||++.|++.+. +|+||++|+|++....
T Consensus 109 ~~Ysf~~g~v~fi~Lds~~~~~------------------~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 170 (294)
T cd00839 109 LWYSFDVGPVHFVSLSTEVDFY------------------GDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNT 170 (294)
T ss_pred ceEEEeeCCEEEEEEecccccc------------------cCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCc
Confidence 5688999999999999976321 012346899999999998533 6899999999987654
Q ss_pred CCC----hHHHHHHHHHHHHhCCccEEEeCCcccceEEee----------------CCeEEEEeCCCCCCCCCCCCCCC-
Q 024595 159 HGV----TKELLLRLLPILEENNVDMYVNGHDHCLQHISS----------------NGIEFLTSGGGSKAWRGDRNWWS- 217 (265)
Q Consensus 159 ~~~----~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----------------~~~~~i~~g~~~~~~~~~~~~~~- 217 (265)
... ....++.|.+++++++|+++|+||.|.+++... .++.||++|+||...........
T Consensus 171 ~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~ 250 (294)
T cd00839 171 DHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPP 250 (294)
T ss_pred cccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCC
Confidence 322 345668899999999999999999999987653 68999999999987653321111
Q ss_pred CccceeeecCCCeEEEEEeCC-eEEEEEEe-cCCCeEEEEEccC
Q 024595 218 PEELKLYYDGQGFMSVKMTRS-EAVVLFYD-VHGNILHKWSIPK 259 (265)
Q Consensus 218 ~~~~~~~~~~~gy~~~~v~~~-~i~~~~~~-~~g~~~~~~~i~~ 259 (265)
+....+....+||.++++.++ .|.+++++ .+|+++++++|.|
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 251 PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred CCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 122344567899999999887 99999997 6799999999976
No 5
>PLN02533 probable purple acid phosphatase
Probab=99.97 E-value=9.2e-29 Score=214.77 Aligned_cols=231 Identities=16% Similarity=0.160 Sum_probs=155.2
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee----
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC---- 80 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~---- 80 (265)
+++.+|||||++||++|.++ ....|.+.++ ....-...+|+++++||||........ ...+.....+|.+
T Consensus 161 i~~~~pD~vl~~GDl~y~~~----~~~~wd~f~~-~i~~l~s~~P~m~~~GNHE~~~~~~~~-~~~f~~y~~rf~mP~~~ 234 (427)
T PLN02533 161 VSKWDYDVFILPGDLSYANF----YQPLWDTFGR-LVQPLASQRPWMVTHGNHELEKIPILH-PEKFTAYNARWRMPFEE 234 (427)
T ss_pred HHhcCCCEEEEcCccccccc----hHHHHHHHHH-HhhhHhhcCceEEeCcccccccccccc-CcCccchhhcccCCccc
Confidence 34568999999999998643 2234433322 222112368999999999986421000 0001111122322
Q ss_pred -----eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEeccc
Q 024595 81 -----SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHT 152 (265)
Q Consensus 81 -----~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P 152 (265)
+.+|+|+.++++||+||+.... ....+|++||++.|++. +..|+|+++|+|
T Consensus 235 ~g~~~~~yYSfd~g~vhfI~Lds~~~~---------------------~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P 293 (427)
T PLN02533 235 SGSTSNLYYSFNVYGVHIIMLGSYTDF---------------------EPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP 293 (427)
T ss_pred cCCCCCceEEEEECCEEEEEEeCCccc---------------------cCchHHHHHHHHHHHhhcccCCCEEEEEeCCC
Confidence 2468899999999999996410 01358999999999984 346899999999
Q ss_pred cccCCC-C-CC--hHHHHHHHHHHHHhCCccEEEeCCcccceEEee--------CCeEEEEeCCCCCCCCC--CCCCCCC
Q 024595 153 IKSAGH-H-GV--TKELLLRLLPILEENNVDMYVNGHDHCLQHISS--------NGIEFLTSGGGSKAWRG--DRNWWSP 218 (265)
Q Consensus 153 ~~~~~~-~-~~--~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~--------~~~~~i~~g~~~~~~~~--~~~~~~~ 218 (265)
++.... + +. ...+++.|.+++.+++|+++|+||.|.+++... .++.||++|+||..... ......+
T Consensus 294 ~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~ 373 (427)
T PLN02533 294 WYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKP 373 (427)
T ss_pred eeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccccCCCCC
Confidence 997643 2 21 234567899999999999999999999988643 67899999999876421 1110012
Q ss_pred ccceeeecCCCeEEEEE-eCCeEEEEEEe-cCC--CeEEEEEccCCCc
Q 024595 219 EELKLYYDGQGFMSVKM-TRSEAVVLFYD-VHG--NILHKWSIPKEPL 262 (265)
Q Consensus 219 ~~~~~~~~~~gy~~~~v-~~~~i~~~~~~-~~g--~~~~~~~i~~~~~ 262 (265)
....+....+||.++++ +...+.++++. -+| .+.|++.|.|-..
T Consensus 374 ~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~ 421 (427)
T PLN02533 374 DISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLT 421 (427)
T ss_pred CceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccC
Confidence 22344456899999997 56699999986 444 3678888887644
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.96 E-value=1.1e-28 Score=203.20 Aligned_cols=203 Identities=18% Similarity=0.174 Sum_probs=139.4
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccc-cccccccccCCCceeeeeeEec
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA-QLSPVLTRKDSRWLCSRSFILD 87 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~ 87 (265)
+|||||++||+++ ++.......+..+.+..++......+|+++++||||....... .+.. +. ..| .+.+|++.
T Consensus 49 ~pd~ii~~GDl~~-~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~-f~---~~~-g~~~y~~~ 122 (262)
T cd07395 49 KPKFVVVCGDLVN-AMPGDELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKD-YR---DVF-GDDYFSFW 122 (262)
T ss_pred CCCEEEEeCCcCC-CCcchhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHH-HH---HHh-CCcceEEE
Confidence 8999999999994 3322111111112233333221236899999999998643211 1111 10 111 13456777
Q ss_pred CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEeccccccCCCCC----
Q 024595 88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHTIKSAGHHG---- 160 (265)
Q Consensus 88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~~~~~~---- 160 (265)
.++++||+|||..+... .+ ...+..+|++||++.|+++ +.+++||++|+|++......
T Consensus 123 ~~~~~~i~lds~~~~~~------------~~---~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~ 187 (262)
T cd07395 123 VGGVFFIVLNSQLFFDP------------SE---VPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSY 187 (262)
T ss_pred ECCEEEEEeccccccCc------------cc---cccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCccc
Confidence 78999999999864210 00 0134679999999999986 46789999999997543221
Q ss_pred --ChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCC
Q 024595 161 --VTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS 238 (265)
Q Consensus 161 --~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~ 238 (265)
.....+.+|.+++++++|+++||||+|........++.++++++++.... ...+||.+++++++
T Consensus 188 ~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~~~g~~~~~~~~~~~~~~--------------~~~~g~~~~~v~~~ 253 (262)
T cd07395 188 FNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGRYGGLEMVVTSAIGAQLG--------------NDKSGLRIVKVTED 253 (262)
T ss_pred CCcCHHHHHHHHHHHHhcCceEEEECccccCCceEECCEEEEEcCceecccC--------------CCCCCcEEEEECCC
Confidence 12345678999999999999999999999888789999998888875432 13579999999999
Q ss_pred eEEEEEEe
Q 024595 239 EAVVLFYD 246 (265)
Q Consensus 239 ~i~~~~~~ 246 (265)
++++++|.
T Consensus 254 ~~~~~~~~ 261 (262)
T cd07395 254 KIVHEYYS 261 (262)
T ss_pred ceeeeeee
Confidence 99999985
No 7
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.2e-24 Score=183.90 Aligned_cols=228 Identities=19% Similarity=0.243 Sum_probs=157.1
Q ss_pred ccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceee-----
Q 024595 7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS----- 81 (265)
Q Consensus 7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~----- 81 (265)
+.++|+|++.||+.|+++.....-.+|..+.+.+ ...+|++++.||||........+ .....||.+|
T Consensus 172 ~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~----As~vPymv~~GNHE~d~~~~~~F----~~y~~Rf~mP~~~s~ 243 (452)
T KOG1378|consen 172 NLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPI----ASYVPYMVCSGNHEIDWPPQPCF----VPYSARFNMPGNSSE 243 (452)
T ss_pred ccCCcEEEEecchhhcCCCCccchHHHHhhhhhh----hccCceEEecccccccCCCcccc----cccceeeccCCCcCC
Confidence 3479999999999998864421112233332322 34799999999999865422211 1222334332
Q ss_pred ----eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-C--CCeEEEEeccccc
Q 024595 82 ----RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-K--AKWKIVVGHHTIK 154 (265)
Q Consensus 82 ----~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-~--~~~~iv~~H~P~~ 154 (265)
..|+|+.+.++||+|+|..+. . . ....+|.+||+++|++. + ..|+|++.|.|++
T Consensus 244 s~~~l~YSfd~G~vhfv~lsse~~~-~--------------~----~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y 304 (452)
T KOG1378|consen 244 SDSNLYYSFDVGGVHFVVLSTETYY-N--------------F----LKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMY 304 (452)
T ss_pred CCCceeEEEeeccEEEEEEeccccc-c--------------c----cccchHHHHHHHHHHHhcccCCCeEEEEecccce
Confidence 468899999999999998753 0 0 12358999999999984 3 4799999999999
Q ss_pred cCCC--C---CChHHHHHHHHHHHHhCCccEEEeCCcccceEEee------------------CCeEEEEeCCCCCCCCC
Q 024595 155 SAGH--H---GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS------------------NGIEFLTSGGGSKAWRG 211 (265)
Q Consensus 155 ~~~~--~---~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~------------------~~~~~i~~g~~~~~~~~ 211 (265)
.... + |.....+..|.+++-+++|++||.||.|.+++..+ .+..||++|++|.....
T Consensus 305 ~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~ 384 (452)
T KOG1378|consen 305 CSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHL 384 (452)
T ss_pred ecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCccccc
Confidence 7665 3 33335567899999999999999999999988543 35668888888853221
Q ss_pred CCC-CCCCccceeeecCCCeEEEEEeCC-eEEEEEEe---cCCCeEEEEEccCCC
Q 024595 212 DRN-WWSPEELKLYYDGQGFMSVKMTRS-EAVVLFYD---VHGNILHKWSIPKEP 261 (265)
Q Consensus 212 ~~~-~~~~~~~~~~~~~~gy~~~~v~~~-~i~~~~~~---~~g~~~~~~~i~~~~ 261 (265)
... ...++...+-....||.++++.+. .+.++.+. .+|+.++.+-+.|+.
T Consensus 385 ~~~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~ 439 (452)
T KOG1378|consen 385 DPFSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDY 439 (452)
T ss_pred CcccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEccc
Confidence 110 011233344557899999999864 55565554 458899999888873
No 8
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.93 E-value=1.1e-24 Score=180.42 Aligned_cols=205 Identities=19% Similarity=0.224 Sum_probs=132.6
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEec
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILD 87 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 87 (265)
.+|||||++||++. ++. ..++ +.+...+ ..+++|+++++||||........+. .. .+ .+..+.+.
T Consensus 54 ~~~D~vvitGDl~~-~~~----~~~~-~~~~~~l--~~l~~Pv~~v~GNHD~~~~~~~~~~----~~--~~-~~~~~~~~ 118 (275)
T PRK11148 54 HEFDLIVATGDLAQ-DHS----SEAY-QHFAEGI--APLRKPCVWLPGNHDFQPAMYSALQ----DA--GI-SPAKHVLI 118 (275)
T ss_pred CCCCEEEECCCCCC-CCC----HHHH-HHHHHHH--hhcCCcEEEeCCCCCChHHHHHHHh----hc--CC-CccceEEe
Confidence 47999999999994 331 1222 2222222 2467899999999998643222111 10 11 11222344
Q ss_pred CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-CC--hHH
Q 024595 88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-GV--TKE 164 (265)
Q Consensus 88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-~~--~~~ 164 (265)
.++++||+|||..... +.+.++++|++||++.|++.+.++.+|++|||+...+.. .+ ...
T Consensus 119 ~~~~~~i~Lds~~~g~-----------------~~G~l~~~ql~wL~~~L~~~~~~~~vv~~hH~P~~~~~~~~d~~~l~ 181 (275)
T PRK11148 119 GEHWQILLLDSQVFGV-----------------PHGELSEYQLEWLERKLADAPERHTLVLLHHHPLPAGCAWLDQHSLR 181 (275)
T ss_pred cCCEEEEEecCCCCCC-----------------cCCEeCHHHHHHHHHHHhhCCCCCeEEEEcCCCCCCCcchhhccCCC
Confidence 4679999999975321 012356799999999999877777788888766543321 11 111
Q ss_pred HHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCC-eEEE
Q 024595 165 LLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRS-EAVV 242 (265)
Q Consensus 165 ~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~-~i~~ 242 (265)
..++|.++++++ +|+++|+||+|........|+.++++++.+..+..... ...+.....||.++++.++ ++..
T Consensus 182 n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~~~gi~~~~~ps~~~q~~~~~~-----~~~~~~~~~g~~~~~l~~~g~~~~ 256 (275)
T PRK11148 182 NAHELAEVLAKFPNVKAILCGHIHQELDLDWNGRRLLATPSTCVQFKPHCT-----NFTLDTVAPGWRELELHADGSLET 256 (275)
T ss_pred CHHHHHHHHhcCCCceEEEecccChHHhceECCEEEEEcCCCcCCcCCCCC-----ccccccCCCcEEEEEEcCCCcEEE
Confidence 236789999997 89999999999988777799999998888866532221 1112234579999999755 6776
Q ss_pred EEEecCC
Q 024595 243 LFYDVHG 249 (265)
Q Consensus 243 ~~~~~~g 249 (265)
+.....+
T Consensus 257 ~~~~~~~ 263 (275)
T PRK11148 257 EVHRLAD 263 (275)
T ss_pred EEEEcCC
Confidence 6655443
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.93 E-value=3.9e-25 Score=179.92 Aligned_cols=196 Identities=21% Similarity=0.231 Sum_probs=132.5
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecC
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDA 88 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 88 (265)
+||+||++||++. .+.. .++ +.+..++ ..+++|+++|+||||........+. .... -.....|.+..
T Consensus 40 ~~d~vi~~GDl~~-~~~~----~~~-~~~~~~l--~~~~~p~~~v~GNHD~~~~~~~~~~----~~~~-~~~~~~~~~~~ 106 (240)
T cd07402 40 RPDLVLVTGDLTD-DGSP----ESY-ERLRELL--AALPIPVYLLPGNHDDRAAMRAVFP----ELPP-APGFVQYVVDL 106 (240)
T ss_pred CCCEEEECccCCC-CCCH----HHH-HHHHHHH--hhcCCCEEEeCCCCCCHHHHHHhhc----cccc-cccccceeEec
Confidence 8999999999994 3211 122 2222322 2358999999999998543222111 1000 01124567888
Q ss_pred ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC-C--hHHH
Q 024595 89 EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG-V--TKEL 165 (265)
Q Consensus 89 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~-~--~~~~ 165 (265)
++++|+++|+..... . ...+.++|++||++.|++...+++|+++|+|++...... . ....
T Consensus 107 ~~~~~i~lds~~~~~---------~--------~~~~~~~ql~wL~~~L~~~~~~~~il~~H~pp~~~~~~~~~~~~~~~ 169 (240)
T cd07402 107 GGWRLILLDSSVPGQ---------H--------GGELCAAQLDWLEAALAEAPDKPTLVFLHHPPFPVGIAWMDAIGLRN 169 (240)
T ss_pred CCEEEEEEeCCCCCC---------c--------CCEECHHHHHHHHHHHHhCCCCCEEEEECCCCccCCchhhhhhhCCC
Confidence 899999999875311 0 112457899999999999877889999999987653211 1 1112
Q ss_pred HHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCe
Q 024595 166 LLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE 239 (265)
Q Consensus 166 ~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~ 239 (265)
.+++.+++.++ +++++|+||+|.......+++.++++|+.+..+.... +.........||..+++.++.
T Consensus 170 ~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (240)
T cd07402 170 AEALAAVLARHPNVRAILCGHVHRPIDGSWGGIPLLTAPSTCHQFAPDL-----DDFALDALAPGYRALSLHEDG 239 (240)
T ss_pred HHHHHHHHhcCCCeeEEEECCcCchHHeEECCEEEEEcCcceeeecCCC-----CcccccccCCCCcEEEEecCC
Confidence 56788999998 9999999999999888889999999999987764222 111222346699999886553
No 10
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.92 E-value=1.4e-24 Score=178.88 Aligned_cols=213 Identities=19% Similarity=0.184 Sum_probs=134.2
Q ss_pred cccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeE
Q 024595 6 EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFI 85 (265)
Q Consensus 6 ~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~ 85 (265)
.+.+||+||++||++. .+.. ....++... ...+ ..+++|+++++||||.............. ....+.+|+
T Consensus 37 ~~~~~d~vv~~GDlv~-~~~~-~~~~~~~~~-~~~l--~~l~~p~~~v~GNHD~~~~~~~~~~~~~~----~~~~~~yys 107 (267)
T cd07396 37 NRESLDFVVQLGDIID-GDNA-RAEEALDAV-LAIL--DRLKGPVHHVLGNHDLYNPSREYLLLYTL----LGLGAPYYS 107 (267)
T ss_pred HcCCCCEEEECCCeec-CCCc-hHHHHHHHH-HHHH--HhcCCCEEEecCccccccccHhhhhcccc----cCCCCceEE
Confidence 3457999999999994 3311 011223222 2222 24679999999999987543222210000 011224577
Q ss_pred ecCceEEEEEEeCcccccccc-CCC--------CCCC-CCcc--c-cchhhhhHHHHHHHHHHHhhcC--CCCeEEEEec
Q 024595 86 LDAEIAEFVFVDTTPFVDEYF-EDP--------GDST-YDWR--G-VYRRKEYLSDLLKDVDGALKNS--KAKWKIVVGH 150 (265)
Q Consensus 86 ~~~~~~~~i~lds~~~~~~~~-~~~--------~~~~-~~~~--~-~~~~~~~~~~Q~~wl~~~l~~~--~~~~~iv~~H 150 (265)
+..++++|++||+........ ... .... ...+ . ....+.+.++|++||++.|+.. ..+++||++|
T Consensus 108 f~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~H 187 (267)
T cd07396 108 FSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSH 187 (267)
T ss_pred EecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 888899999999965321000 000 0000 0000 0 0002346689999999999874 3467899999
Q ss_pred cccccCCC-CCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCC
Q 024595 151 HTIKSAGH-HGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQ 228 (265)
Q Consensus 151 ~P~~~~~~-~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (265)
+|++.... ........+.+.++++++ +|+++|+||+|.......+|+.++++|+.+.. .. ...
T Consensus 188 hp~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~~gi~~~~~~a~~~~-~~--------------~~~ 252 (267)
T cd07396 188 FPLHPESTSPHGLLWNHEEVLSILRAYGCVKACISGHDHEGGYAQRHGIHFLTLEGMVET-PP--------------ESN 252 (267)
T ss_pred ccCCCCCCCccccccCHHHHHHHHHhCCCEEEEEcCCcCCCCccccCCeeEEEechhhcC-CC--------------CCC
Confidence 99876542 111111246788999985 89999999999999877899999999988866 21 355
Q ss_pred CeEEEEEeCCeEEE
Q 024595 229 GFMSVKMTRSEAVV 242 (265)
Q Consensus 229 gy~~~~v~~~~i~~ 242 (265)
-|.++.+.++++.+
T Consensus 253 ~~~~~~~~~~~~~~ 266 (267)
T cd07396 253 AFGVVIVYEDRLIL 266 (267)
T ss_pred ceEEEEEeCCceee
Confidence 88999999988754
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=3.7e-22 Score=163.27 Aligned_cols=182 Identities=18% Similarity=0.252 Sum_probs=109.0
Q ss_pred ccccccCCCEEEecCCccCCCCCC----CCCC-hhhhhhcccccCCCCC-CCceEEcCCCcccCCCcc--cccccccccc
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLT----GEED-PAFLDSFTSIYTAPSL-QKQWYNVLGNHDYRGDVE--AQLSPVLTRK 74 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~----~~~~-~~~~~~~~~~~~~~~l-~~p~~~i~GNHD~~~~~~--~~~~~~~~~~ 74 (265)
+.+++.+||++|++||++. .+.. .... .+|...++.+.....+ +.|++.++||||.++... ....+ +.+.
T Consensus 27 ~~i~~~~pd~i~~~GD~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~-~~~y 104 (256)
T cd07401 27 NFIDVIKPALVLATGDLTD-NKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFDIRGNHDLFNIPSLDSENNY-YRKY 104 (256)
T ss_pred HHHHhhCCCEEEEcccccc-ccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEEeCCCCCcCCCCCccchhhH-HHHh
Confidence 3456789999999999993 2221 1111 2232222222222223 589999999999975322 11111 1111
Q ss_pred CCCceee-eeeE--ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-CCCeEEEEec
Q 024595 75 DSRWLCS-RSFI--LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-KAKWKIVVGH 150 (265)
Q Consensus 75 ~~~~~~~-~~y~--~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-~~~~~iv~~H 150 (265)
...+..+ .+|. +..++++||+|||..+... .....+ .+.+.++|++||++.|+++ +.+++||++|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~------~~~~~~-----~g~l~~~ql~wL~~~L~~~~~~~~~IV~~H 173 (256)
T cd07401 105 SATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGP------KRPFNF-----FGSLDKKLLDRLEKELEKSTNSNYTIWFGH 173 (256)
T ss_pred heecCCCccceEEEecCCCEEEEEEcCccCCCC------CCCCce-----eccCCHHHHHHHHHHHHhcccCCeEEEEEc
Confidence 1111111 1222 3358899999999874221 000111 1345679999999999875 4578999999
Q ss_pred cccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE---EeeCCeEE
Q 024595 151 HTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH---ISSNGIEF 199 (265)
Q Consensus 151 ~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~---~~~~~~~~ 199 (265)
+|+......... . ...+.+++++++|+++||||+|.... ...+++++
T Consensus 174 hP~~~~~~~~~~-~-~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~h~~~~~~ 223 (256)
T cd07401 174 YPTSTIISPSAK-S-SSKFKDLLKKYNVTAYLCGHLHPLGGLEPVHYAGHPY 223 (256)
T ss_pred ccchhccCCCcc-h-hHHHHHHHHhcCCcEEEeCCccCCCcceeeeecCCce
Confidence 998653322211 1 22389999999999999999999988 23355543
No 12
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.84 E-value=1.4e-20 Score=149.97 Aligned_cols=129 Identities=21% Similarity=0.252 Sum_probs=86.2
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeee
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRS 83 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (265)
.+++.+||+||++||++. .+.. ..++....+.+-.....++|+++++||||.
T Consensus 30 ~~~~~~~d~iv~~GDl~~-~~~~---~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~------------------------ 81 (214)
T cd07399 30 NAEALNIAFVLHLGDIVD-DGDN---DAEWEAADKAFARLDKAGIPYSVLAGNHDL------------------------ 81 (214)
T ss_pred HHHHcCCCEEEECCCccC-CCCC---HHHHHHHHHHHHHHHHcCCcEEEECCCCcc------------------------
Confidence 345578999999999994 3321 123332221111111245899999999991
Q ss_pred eEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh-
Q 024595 84 FILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT- 162 (265)
Q Consensus 84 y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~- 162 (265)
++.+|+.. .++|++||++.|++.+.+++||++|+|+.........
T Consensus 82 ---------~~~ld~~~-------------------------~~~ql~WL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~ 127 (214)
T cd07399 82 ---------VLALEFGP-------------------------RDEVLQWANEVLKKHPDRPAILTTHAYLNCDDSRPDSI 127 (214)
T ss_pred ---------hhhCCCCC-------------------------CHHHHHHHHHHHHHCCCCCEEEEecccccCCCCcCccc
Confidence 11222211 2488999999999987889999999998865432111
Q ss_pred ------HHHHHHHHHHHHhC-CccEEEeCCcccceEEee
Q 024595 163 ------KELLLRLLPILEEN-NVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 163 ------~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~ 194 (265)
....+.|.++++++ +|.+||+||.|.......
T Consensus 128 ~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 128 DYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred ccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 12235678999988 799999999999876655
No 13
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.81 E-value=1.8e-19 Score=146.74 Aligned_cols=171 Identities=20% Similarity=0.202 Sum_probs=104.0
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCChhhhh---hcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLD---SFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC 80 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~ 80 (265)
+.+..+||+||++||++. .|.. ..+.+|.+ .|..++......+|++.||||||+.......... ...+.. +..
T Consensus 40 ~~~~l~PD~vv~lGDL~d-~G~~-~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~-~~rf~~-~Fg 115 (257)
T cd08163 40 MQKQLKPDSTIFLGDLFD-GGRD-WADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPV-RQRFEK-YFG 115 (257)
T ss_pred HHHhcCCCEEEEeccccc-CCee-CcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHH-HHHHHH-HhC
Confidence 345679999999999993 4422 12244543 3344443222247999999999985321111000 011101 112
Q ss_pred eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-CCCeEEEEeccccccCCC-
Q 024595 81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-KAKWKIVVGHHTIKSAGH- 158 (265)
Q Consensus 81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-~~~~~iv~~H~P~~~~~~- 158 (265)
+..+.+..++++||+|||...... ....+..+|++||++.++.. ..+++||++|+|++....
T Consensus 116 ~~~~~~~~~~~~fV~Lds~~l~~~----------------~~~~~~~~~~~~l~~~l~~~~~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 116 PTSRVIDVGNHTFVILDTISLSNK----------------DDPDVYQPPREFLHSFSAMKVKSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred CCceEEEECCEEEEEEccccccCC----------------cccccchhHHHHHHhhhhccCCCCcEEEEeccccccCCCC
Confidence 234677788999999999753210 01234568899999998874 567899999999985421
Q ss_pred -------C--------CChHH--H-HHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 159 -------H--------GVTKE--L-LLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 159 -------~--------~~~~~--~-~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
. |...+ + .+.-..+++..++.+||+||+|.+.....
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~h 233 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVVH 233 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeEc
Confidence 0 00000 0 12223566666899999999999987655
No 14
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.80 E-value=4e-19 Score=148.93 Aligned_cols=174 Identities=14% Similarity=0.116 Sum_probs=104.7
Q ss_pred CCCEEEecCCccCCCCCCCCCChh----hhhhcccccCCCCCCCceEEcCCCcccCCCccccc----cccccccCC----
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPA----FLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQL----SPVLTRKDS---- 76 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~----~~~~~~~~~---- 76 (265)
+|||||++||++............ +...+.. +.....++|+++++||||......... ...+.....
T Consensus 68 ~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~ 146 (296)
T cd00842 68 KPDFILWTGDLVRHDVDEQTPETLVLISISNLTSL-LKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKS 146 (296)
T ss_pred CCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHH-HHHhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHh
Confidence 899999999999433211111000 1111111 111224689999999999875311100 000111111
Q ss_pred --------CceeeeeeEec-CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC--CCCeE
Q 024595 77 --------RWLCSRSFILD-AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS--KAKWK 145 (265)
Q Consensus 77 --------~~~~~~~y~~~-~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~--~~~~~ 145 (265)
.+....+|++. .+++++|+|||..+.... .+.. + .......+|++||+++|+++ +.+.+
T Consensus 147 ~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~-------~~~~-~--~~~~~~~~Ql~WL~~~L~~a~~~~~~v 216 (296)
T cd00842 147 WLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN-------FWLL-G--SNETDPAGQLQWLEDELQEAEQAGEKV 216 (296)
T ss_pred hcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC-------hhhh-c--cCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 11123456655 789999999999764211 0000 0 01122468999999999985 34578
Q ss_pred EEEeccccccCCCCCChHHHHHHHHHHHHhCC--ccEEEeCCcccceEEee
Q 024595 146 IVVGHHTIKSAGHHGVTKELLLRLLPILEENN--VDMYVNGHDHCLQHISS 194 (265)
Q Consensus 146 iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~--v~~vl~GH~H~~~~~~~ 194 (265)
+|++|+|+........ ....+++.++++++. |.++|+||+|.......
T Consensus 217 ~I~~HiPp~~~~~~~~-~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~ 266 (296)
T cd00842 217 WIIGHIPPGVNSYDTL-ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRVF 266 (296)
T ss_pred EEEeccCCCCcccccc-hHHHHHHHHHHHHHHHhhheeeecccccceEEEE
Confidence 8999999876543221 344678899999986 78999999999876554
No 15
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.77 E-value=2.8e-18 Score=139.33 Aligned_cols=184 Identities=16% Similarity=0.081 Sum_probs=108.0
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCc-cccccccccccCCCceeeee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDV-EAQLSPVLTRKDSRWLCSRS 83 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (265)
+.+.+||+||++||++.. . .+..+.++.+.. ...+|+++++||||+.... ...+.... ...+.....
T Consensus 28 ~~~~~~d~vv~~GDl~~~-~------~~~~~~~~~l~~--~~~~pv~~v~GNHD~~~~~~~~~~~~~~---~~~~l~~~~ 95 (239)
T TIGR03729 28 LKKQKIDHLHIAGDISND-F------QRSLPFIEKLQE--LKGIKVTFNAGNHDMLKDLTYEEIESND---SPLYLHNRF 95 (239)
T ss_pred HHhcCCCEEEECCccccc-h------hhHHHHHHHHHH--hcCCcEEEECCCCCCCCCCCHHHHHhcc---chhhhcccc
Confidence 345689999999999932 1 111122222211 1358999999999986321 11111000 111222233
Q ss_pred eEecCceEEEEEEeCccccccccCCCC-------------CCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEec
Q 024595 84 FILDAEIAEFVFVDTTPFVDEYFEDPG-------------DSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGH 150 (265)
Q Consensus 84 y~~~~~~~~~i~lds~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H 150 (265)
..+..++++|++++...-.. +..... .+... . ......+.++|++||++.|++...+++||++|
T Consensus 96 ~~~~~~~~~~ig~~gw~d~~-~~~~~~~~~~~~~~~d~~~~~~~~-~-~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH 172 (239)
T TIGR03729 96 IDIPNTQWRIIGNNGWYDYS-FSNDKTSKEILRWKKSFWFDRRIK-R-PMSDPERTAIVLKQLKKQLNQLDNKQVIFVTH 172 (239)
T ss_pred cccCCCceEEEeeccceecc-cccccCHHHHHHhhhcEEeecccC-C-CCChHHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence 33445779999988532110 000000 00000 0 01234577899999999999877788999999
Q ss_pred cccccCCC------CCCh--HHH--HHHHHHHHHhCCccEEEeCCcccceE-EeeCCeEEEEeC
Q 024595 151 HTIKSAGH------HGVT--KEL--LLRLLPILEENNVDMYVNGHDHCLQH-ISSNGIEFLTSG 203 (265)
Q Consensus 151 ~P~~~~~~------~~~~--~~~--~~~l~~~~~~~~v~~vl~GH~H~~~~-~~~~~~~~i~~g 203 (265)
||+..... .... ... ...|.+++++++++++++||+|.... ...+++.++++.
T Consensus 173 ~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~~~~~i~~~~~~~~~ 236 (239)
T TIGR03729 173 FVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRFGPLTIGGTTYHNRP 236 (239)
T ss_pred ccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCCCCEEECCEEEEecC
Confidence 99865211 1111 011 25688889989999999999999974 444899988653
No 16
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.77 E-value=2.4e-18 Score=138.85 Aligned_cols=181 Identities=19% Similarity=0.132 Sum_probs=104.8
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecC
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDA 88 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 88 (265)
+||+||++||++. .+. ..+.......+ ..+..|+++|+||||++......+...+.+. .+.......+..
T Consensus 41 ~~D~viiaGDl~~-~~~----~~~~~~~l~~l---~~l~~~v~~V~GNHD~~~~~~~~~~~~l~~~--~~~~~~n~~~~~ 110 (232)
T cd07393 41 PEDIVLIPGDISW-AMK----LEEAKLDLAWI---DALPGTKVLLKGNHDYWWGSASKLRKALEES--RLALLFNNAYID 110 (232)
T ss_pred CCCEEEEcCCCcc-CCC----hHHHHHHHHHH---HhCCCCeEEEeCCccccCCCHHHHHHHHHhc--CeEEeccCcEEE
Confidence 8999999999983 221 01222221211 1234589999999998432111111111111 111111122333
Q ss_pred ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCC----CeEEEEeccccccCCCCCChHH
Q 024595 89 EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKA----KWKIVVGHHTIKSAGHHGVTKE 164 (265)
Q Consensus 89 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~----~~~iv~~H~P~~~~~~~~~~~~ 164 (265)
+++.|++++...+....+.+.+.+.. ....+.+..+|+.||++.|++... +++|+++|+|++.....
T Consensus 111 ~~i~i~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~----- 181 (232)
T cd07393 111 DDVAICGTRGWDNPGNPWPPINETLK----VEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD----- 181 (232)
T ss_pred CCEEEEEEEeeCCCCCcccccccccc----chhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC-----
Confidence 56888887643321100000000000 011245567899999999987422 36899999998765421
Q ss_pred HHHHHHHHHHhCCccEEEeCCcccceEEe-----eCCeEEEEeCCCCCCC
Q 024595 165 LLLRLLPILEENNVDMYVNGHDHCLQHIS-----SNGIEFLTSGGGSKAW 209 (265)
Q Consensus 165 ~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-----~~~~~~i~~g~~~~~~ 209 (265)
.+.+..++++++++++++||+|...... .+|+.|+++++++..+
T Consensus 182 -~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~~~ 230 (232)
T cd07393 182 -DSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYLNF 230 (232)
T ss_pred -HHHHHHHHHHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhcCc
Confidence 2356778888899999999999987644 5899999988887554
No 17
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.77 E-value=2.2e-17 Score=141.77 Aligned_cols=97 Identities=25% Similarity=0.245 Sum_probs=73.4
Q ss_pred eeeEec-CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-
Q 024595 82 RSFILD-AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH- 159 (265)
Q Consensus 82 ~~y~~~-~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~- 159 (265)
.+|+|+ .++++||+|||..... .+ .+.+.++|++||+++|+.++.+++||++|||++.....
T Consensus 292 ~YYSFd~~ggvrfIvLDSt~~~G-----------~~-----~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~~ 355 (496)
T TIGR03767 292 GYYTFDIAGGVRGISMDTTNRAG-----------GD-----EGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNEL 355 (496)
T ss_pred ceEEEEeECCEEEEEEeCCCcCC-----------Cc-----CCccCHHHHHHHHHHHhcCCCCCEEEEECCCCccccccc
Confidence 367888 7899999999985311 01 12456899999999999987889999999998764321
Q ss_pred ------CChHHHHHHHHHHHHhC-CccEEEeCCcccceEEee
Q 024595 160 ------GVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 160 ------~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~ 194 (265)
+......++|.++++++ +|.++||||.|.......
T Consensus 356 ~Dp~~pg~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~ 397 (496)
T TIGR03767 356 TDPVDPGEKRHLGTELVSLLLEHPNVLAWVNGHTHSNKITAH 397 (496)
T ss_pred cccccccccccCHHHHHHHHhcCCCceEEEECCcCCCccccc
Confidence 11112246899999998 899999999999875543
No 18
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.74 E-value=1.8e-17 Score=129.74 Aligned_cols=165 Identities=18% Similarity=0.075 Sum_probs=97.8
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSF 84 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y 84 (265)
+++.+||+||++||++. .+.. ... ..++. + ..+++|+++|+||||....... ... . ..+.....
T Consensus 19 ~~~~~~D~vv~~GDl~~-~~~~----~~~-~~~~~-l--~~~~~p~~~v~GNHD~~~~~~~-~~~---~--~~~~~~~~- 82 (188)
T cd07392 19 LKAEEADAVIVAGDITN-FGGK----EAA-VEINL-L--LAIGVPVLAVPGNCDTPEILGL-LTS---A--GLNLHGKV- 82 (188)
T ss_pred hhccCCCEEEECCCccC-cCCH----HHH-HHHHH-H--HhcCCCEEEEcCCCCCHHHHHh-hhc---C--cEecCCCE-
Confidence 34578999999999984 3311 111 11221 1 2457899999999997542111 100 0 00111112
Q ss_pred EecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccC-C-CCCCh
Q 024595 85 ILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSA-G-HHGVT 162 (265)
Q Consensus 85 ~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~-~-~~~~~ 162 (265)
+..++++|+++++..... +. ....+.++|+.|+ +.+.....++.|+++|+|+... . .....
T Consensus 83 -~~~~~~~~~g~~~~~~~~------------~~---~~~~~~~~~l~~~-~~l~~~~~~~~ilv~H~pp~~~~~d~~~~~ 145 (188)
T cd07392 83 -VEVGGYTFVGIGGSNPTP------------FN---TPIELSEEEIVSD-GRLNNLLAKNLILVTHAPPYGTAVDRVSGG 145 (188)
T ss_pred -EEECCEEEEEeCCCCCCC------------CC---CccccCHHHHHHh-hhhhccCCCCeEEEECCCCcCCcccccCCC
Confidence 223568999998753110 00 0123456789998 5555566778999999999763 1 11100
Q ss_pred -HHHHHHHHHHHHhCCccEEEeCCcccceEE-eeCCeEEEEe
Q 024595 163 -KELLLRLLPILEENNVDMYVNGHDHCLQHI-SSNGIEFLTS 202 (265)
Q Consensus 163 -~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~-~~~~~~~i~~ 202 (265)
..-...+..+++++++++++|||+|..... ..+++.++..
T Consensus 146 ~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~~~~~~~~~n~ 187 (188)
T cd07392 146 FHVGSKAIRKFIEERQPLLCICGHIHESRGVDKIGNTLVVNP 187 (188)
T ss_pred CccCCHHHHHHHHHhCCcEEEEeccccccceeeeCCeEEecC
Confidence 011356788888899999999999998643 3466666543
No 19
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.71 E-value=4.8e-17 Score=143.87 Aligned_cols=239 Identities=18% Similarity=0.194 Sum_probs=113.7
Q ss_pred cccccCCCEEEecCCccCCCCC---CC---------------CCC-hhhhhhcccccCCCCC-----CCceEEcCCCccc
Q 024595 4 IGEKLEIDFVISTGDNFYEDGL---TG---------------EED-PAFLDSFTSIYTAPSL-----QKQWYNVLGNHDY 59 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~---~~---------------~~~-~~~~~~~~~~~~~~~l-----~~p~~~i~GNHD~ 59 (265)
++++.+|||+|++||.||.++. .. ... ..++..|......+.+ .+|+++|+.+||+
T Consensus 127 ~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi 206 (453)
T PF09423_consen 127 IAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDI 206 (453)
T ss_dssp HTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTT
T ss_pred hhccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCcee
Confidence 4554799999999999998852 00 001 2333333322222222 6899999999999
Q ss_pred CCCcccccc-------c------------cccccCCCc------eeeeeeEecCce-EEEEEEeCccccccccCCCCCCC
Q 024595 60 RGDVEAQLS-------P------------VLTRKDSRW------LCSRSFILDAEI-AEFVFVDTTPFVDEYFEDPGDST 113 (265)
Q Consensus 60 ~~~~~~~~~-------~------------~~~~~~~~~------~~~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~ 113 (265)
.+|...... . ++.....+- ....++.+.+|+ +.|++||++.+........ ..
T Consensus 207 ~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~--~~ 284 (453)
T PF09423_consen 207 GNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDG--PG 284 (453)
T ss_dssp STT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCS--SE
T ss_pred cccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccc--cc
Confidence 765331100 0 000000000 001234577777 9999999999865211100 00
Q ss_pred CCc--cccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-------------CChHHHHHHHHHHHHhCCc
Q 024595 114 YDW--RGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-------------GVTKELLLRLLPILEENNV 178 (265)
Q Consensus 114 ~~~--~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-------------~~~~~~~~~l~~~~~~~~v 178 (265)
..+ .+......++++|++||++.|.++.++|+||++-.|+...... ......+++|+++|++.++
T Consensus 285 ~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~ 364 (453)
T PF09423_consen 285 DTCPAADDPSRTMLGEEQWDWLEDWLASSQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGI 364 (453)
T ss_dssp E--HHHH-TT--SS-HHHHHHHHHHHHH--SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT-
T ss_pred cccccccCCccCcCCHHHHHHHHHHHhcCCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCC
Confidence 000 0113345788999999999999999999999998887543211 1123457889999988776
Q ss_pred --cEEEeCCcccceEEee---C------C---eEEEEeCCCCCCCCCC-CCC-----C--CCccceeee-cCCCeEEEEE
Q 024595 179 --DMYVNGHDHCLQHISS---N------G---IEFLTSGGGSKAWRGD-RNW-----W--SPEELKLYY-DGQGFMSVKM 235 (265)
Q Consensus 179 --~~vl~GH~H~~~~~~~---~------~---~~~i~~g~~~~~~~~~-~~~-----~--~~~~~~~~~-~~~gy~~~~v 235 (265)
.++|+|+.|....... . + +..+++++.+...... ... . ..+...|.. ..+||++|++
T Consensus 365 ~~vV~LSGDvH~~~~~~~~~~~~~~~~~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~ 444 (453)
T PF09423_consen 365 RNVVFLSGDVHASAASRIPPDDADPPDGPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDI 444 (453)
T ss_dssp --EEEEE-SSSSEEEEEEESSTT---TTS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEE
T ss_pred CCEEEEecCcchheeeecccccccccCCCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEE
Confidence 4999999999987654 1 1 2334444443332210 000 0 012345544 6789999999
Q ss_pred eCCeEEEEE
Q 024595 236 TRSEAVVLF 244 (265)
Q Consensus 236 ~~~~i~~~~ 244 (265)
++++++.++
T Consensus 445 ~~~~~~~~~ 453 (453)
T PF09423_consen 445 TPERVTAEW 453 (453)
T ss_dssp ETTEEEEEE
T ss_pred ccceEEEEC
Confidence 999998875
No 20
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.71 E-value=1.7e-17 Score=131.13 Aligned_cols=139 Identities=18% Similarity=0.201 Sum_probs=85.7
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeee
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSR 82 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~ 82 (265)
++++..+||+||++||+++...........+.+.++.+ ...++|+++++||||..+
T Consensus 35 ~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l---~~~~~p~~~~~GNHD~~g--------------------- 90 (199)
T cd07383 35 RVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPM---IDRKIPWAATFGNHDGYD--------------------- 90 (199)
T ss_pred HHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHH---HHcCCCEEEECccCCCCC---------------------
Confidence 34566799999999999964332110012222222222 124799999999999000
Q ss_pred eeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC-----CCCeEEEEeccccccCC
Q 024595 83 SFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-----KAKWKIVVGHHTIKSAG 157 (265)
Q Consensus 83 ~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-----~~~~~iv~~H~P~~~~~ 157 (265)
.+.++|++||++.+.+. ...+.++++|||+....
T Consensus 91 -----------------------------------------~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~ 129 (199)
T cd07383 91 -----------------------------------------WIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYR 129 (199)
T ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHH
Confidence 01247899999999884 44689999999987542
Q ss_pred C--------CCChH------HHHHHHHHHH-HhCCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595 158 H--------HGVTK------ELLLRLLPIL-EENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206 (265)
Q Consensus 158 ~--------~~~~~------~~~~~l~~~~-~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~ 206 (265)
. .|... .....++..+ +..+|+++++||+|.+......+...++.|+.+
T Consensus 130 ~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~~~~i~l~~g~~~ 193 (199)
T cd07383 130 EVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGT 193 (199)
T ss_pred hhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecccCCEEEeCCCCC
Confidence 1 11110 1123344444 557899999999999765554444455655543
No 21
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.65 E-value=4.5e-15 Score=117.96 Aligned_cols=183 Identities=11% Similarity=0.021 Sum_probs=101.1
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccccccccc--CCC-c-ee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRK--DSR-W-LC 80 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~--~~~-~-~~ 80 (265)
+++.++|+||++||++. .+. ...++...+..+ ..+..|+++++||||.. ....+...+... .+. . ..
T Consensus 27 ~~~~~~D~vv~~GDl~~-~g~---~~~~~~~~l~~l---~~l~~pv~~V~GNhD~~--v~~~l~~~~~~~~~~p~~~~lh 97 (224)
T cd07388 27 APETGADAIVLIGNLLP-KAA---KSEDYAAFFRIL---GEAHLPTFYVPGPQDAP--LWEYLREAYNAELVHPEIRNVH 97 (224)
T ss_pred HhhcCCCEEEECCCCCC-CCC---CHHHHHHHHHHH---HhcCCceEEEcCCCChH--HHHHHHHHhcccccCccceecC
Confidence 34568999999999994 221 001222222221 24568999999999964 111111001000 000 0 11
Q ss_pred eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHH----HHHHH----HhhcCCCCeEEEEeccc
Q 024595 81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLL----KDVDG----ALKNSKAKWKIVVGHHT 152 (265)
Q Consensus 81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~----~wl~~----~l~~~~~~~~iv~~H~P 152 (265)
.....+. +.++|++++..... . ..+.++|+ .|+.+ .+.+...++.|+++|+|
T Consensus 98 ~~~~~~~-g~~~~~GlGGs~~~----------~---------~e~sE~e~~~~~~~~~~~~l~~~~~~~~~~~VLv~H~P 157 (224)
T cd07388 98 ETFAFWR-GPYLVAGVGGEIAD----------E---------GEPEEHEALRYPAWVAEYRLKALWELKDYRKVFLFHTP 157 (224)
T ss_pred CCeEEec-CCeEEEEecCCcCC----------C---------CCcCHHHHhhhhhhHHHHHHHHHHhCCCCCeEEEECCC
Confidence 1111222 56899999855311 0 11233442 45433 44444566889999999
Q ss_pred cccCC-CCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeE
Q 024595 153 IKSAG-HHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFM 231 (265)
Q Consensus 153 ~~~~~-~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~ 231 (265)
|+... .|.. ...+..++++++..+++|||.| ......+++..+..|. .....|+
T Consensus 158 P~g~g~~h~G----S~alr~~I~~~~P~l~i~GHih-~~~~~~g~t~vvNpg~--------------------~~~g~~a 212 (224)
T cd07388 158 PYHKGLNEQG----SHEVAHLIKTHNPLVVLVGGKG-QKHELLGASWVVVPGD--------------------LSEGRYA 212 (224)
T ss_pred CCCCCCCccC----HHHHHHHHHHhCCCEEEEcCCc-eeEEEeCCEEEECCCc--------------------ccCCcEE
Confidence 98873 2322 2456779999999999999999 3323335555443221 1234778
Q ss_pred EEEEeCCeEE
Q 024595 232 SVKMTRSEAV 241 (265)
Q Consensus 232 ~~~v~~~~i~ 241 (265)
++++++.+++
T Consensus 213 ~i~~~~~~v~ 222 (224)
T cd07388 213 LLDLRARKLE 222 (224)
T ss_pred EEEecCccee
Confidence 9998765544
No 22
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.62 E-value=2.3e-15 Score=127.24 Aligned_cols=239 Identities=16% Similarity=0.138 Sum_probs=137.4
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCC---------------------ChhhhhhcccccCCCC-----CCCceEEcCCC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEE---------------------DPAFLDSFTSIYTAPS-----LQKQWYNVLGN 56 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~---------------------~~~~~~~~~~~~~~~~-----l~~p~~~i~GN 56 (265)
+.+++++||||||+||.||++|..... -.+++..+........ ...||++.|.+
T Consensus 162 ~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDD 241 (522)
T COG3540 162 KTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDD 241 (522)
T ss_pred HHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEecc
Confidence 346778999999999999998743100 0123333221111112 25899999999
Q ss_pred cccCCCccccccc--------------------cccccCCCce-ee---e-eeEecCce-EEEEEEeCccccccccCCCC
Q 024595 57 HDYRGDVEAQLSP--------------------VLTRKDSRWL-CS---R-SFILDAEI-AEFVFVDTTPFVDEYFEDPG 110 (265)
Q Consensus 57 HD~~~~~~~~~~~--------------------~~~~~~~~~~-~~---~-~y~~~~~~-~~~i~lds~~~~~~~~~~~~ 110 (265)
||..+|....... +++.+--|.. .| + +-.|.+|+ ..+++||++.|.....+..
T Consensus 242 HEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~d- 320 (522)
T COG3540 242 HEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGD- 320 (522)
T ss_pred ccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCC-
Confidence 9998763322111 0000000000 01 1 22466665 7899999999873221111
Q ss_pred CCCCCc--cccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCC----------------CCChHHHHHHHHHH
Q 024595 111 DSTYDW--RGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGH----------------HGVTKELLLRLLPI 172 (265)
Q Consensus 111 ~~~~~~--~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~----------------~~~~~~~~~~l~~~ 172 (265)
.....+ ........++++|.+||+..|..++++|+||....|+-.... .|.. .-+++|+.+
T Consensus 321 g~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~-~~RerLl~f 399 (522)
T COG3540 321 GNPPNCQAVAGSAATMLGEQQEQWLKRGLGASKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYP-AGRERLLRF 399 (522)
T ss_pred CCcchhhhhhCccccchhhHHHHHHHhhhhhcchhhhhhhhhcceeEeecCCCccccCccccccCcCCCc-ccHHHHHHH
Confidence 111111 111234567899999999999999999999999888753321 2222 236799999
Q ss_pred HHhCCcc--EEEeCCcccceEEee-----------CCeEEEEeCCCCCCCCC--CCCC----CCCccceeeecC-CCeEE
Q 024595 173 LEENNVD--MYVNGHDHCLQHISS-----------NGIEFLTSGGGSKAWRG--DRNW----WSPEELKLYYDG-QGFMS 232 (265)
Q Consensus 173 ~~~~~v~--~vl~GH~H~~~~~~~-----------~~~~~i~~g~~~~~~~~--~~~~----~~~~~~~~~~~~-~gy~~ 232 (265)
++..++. +||+|..|....... ..-.|+ +++.+....+ .... -..+.++|.+.. .||.+
T Consensus 400 i~~~~~~N~V~LtgDvH~~wA~~l~~d~a~~~~~~~f~Efv-~tsi~sG~~gp~~~~~~~~l~~np~vkF~~a~~~g~~~ 478 (522)
T COG3540 400 IADRKIRNTVVLTGDVHYSWAHDLDPDFAQFEDFAPFWEFV-STSINSGGFGPNDLPDMAILTFNPEVKFNNAPGRGYVL 478 (522)
T ss_pred HHhcCCCCcEEEechhHHHHHhhcCcchhcccccCceeeEe-eccCcCCCcCCCcCchhhhhccCceEEeeccccccccc
Confidence 9988764 999999997653322 122333 3322222111 1110 012345666665 89999
Q ss_pred EEEeCCeEEEEE
Q 024595 233 VKMTRSEAVVLF 244 (265)
Q Consensus 233 ~~v~~~~i~~~~ 244 (265)
+.+...+..-++
T Consensus 479 ~~~~~~q~~~~~ 490 (522)
T COG3540 479 CPVAGLQFFGEV 490 (522)
T ss_pred CCcccceeEEEE
Confidence 998877665554
No 23
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.62 E-value=1.5e-16 Score=122.50 Aligned_cols=63 Identities=22% Similarity=0.197 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh----HHHHHHHHHHHHhCCccEEEeCCcccc
Q 024595 127 SDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT----KELLLRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 127 ~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~----~~~~~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
.+++.|+...+.....+++||++|+|+......... ....+.+..++++++|+++|+||+|.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 134 QEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred hhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 455666666666667789999999999876543321 234567888999999999999999975
No 24
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.61 E-value=2.3e-14 Score=120.04 Aligned_cols=167 Identities=21% Similarity=0.175 Sum_probs=99.2
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSF 84 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y 84 (265)
++..+||+||++||++. .|.. .++.. +..++....+..|++++|||||.+......+...+. .++. ..-
T Consensus 29 i~~~~~D~~v~tGDl~~-~~~~----~~~~~-~~~~l~~~~~~~~~~~vpGNHD~~~~~~~~~~~~~~---~~~~--~~~ 97 (301)
T COG1409 29 IEQLKPDLLVVTGDLTN-DGEP----EEYRR-LKELLARLELPAPVIVVPGNHDARVVNGEAFSDQFF---NRYA--VLV 97 (301)
T ss_pred HhcCCCCEEEEccCcCC-CCCH----HHHHH-HHHHHhhccCCCceEeeCCCCcCCchHHHHhhhhhc---ccCc--ceE
Confidence 44578999999999994 4422 22222 222222235678999999999987643332221110 1110 001
Q ss_pred EecC-ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCC---eEEEEeccccccCCCCC
Q 024595 85 ILDA-EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAK---WKIVVGHHTIKSAGHHG 160 (265)
Q Consensus 85 ~~~~-~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~---~~iv~~H~P~~~~~~~~ 160 (265)
.... +.++++.+|+..... +.+.+..+|+.||++.|+..... .+++++|||+.......
T Consensus 98 ~~~~~~~~~~~~~d~~~~~~-----------------~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~ 160 (301)
T COG1409 98 GACSSGGWRVIGLDSSVPGV-----------------PLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGV 160 (301)
T ss_pred eeccCCceEEEEecCCCCCC-----------------CCCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCcc
Confidence 1222 678999999987421 12235679999999999986543 45566666655332211
Q ss_pred C--hHHHHHHHHHHHHhCC--ccEEEeCCcccc--eEEeeCCeEE
Q 024595 161 V--TKELLLRLLPILEENN--VDMYVNGHDHCL--QHISSNGIEF 199 (265)
Q Consensus 161 ~--~~~~~~~l~~~~~~~~--v~~vl~GH~H~~--~~~~~~~~~~ 199 (265)
. .......+...+..++ ++++++||.|.. ......+...
T Consensus 161 ~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~~ 205 (301)
T COG1409 161 DRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGTRL 205 (301)
T ss_pred ceeeeecchhHHHHHHhcCCceEEEEeCcccccccccceeCCeee
Confidence 1 1122345667777777 999999999998 5444444433
No 25
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.61 E-value=2.5e-14 Score=116.37 Aligned_cols=189 Identities=19% Similarity=0.278 Sum_probs=105.9
Q ss_pred cccccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCcc--------cccccccc
Q 024595 2 GLIGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVE--------AQLSPVLT 72 (265)
Q Consensus 2 ~~~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~--------~~~~~~~~ 72 (265)
.++.+.++|||||++||+++. ....+. .-+.+++..+ -..+|||.+++||||..+... ..+.+.+.
T Consensus 93 ~rvL~sE~PDlVVfTGD~i~g--~~t~Da~~sl~kAvaP~---I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~ 167 (379)
T KOG1432|consen 93 SRVLASEKPDLVVFTGDNIFG--HSTQDAATSLMKAVAPA---IDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLS 167 (379)
T ss_pred HHHHhccCCCEEEEeCCcccc--cccHhHHHHHHHHhhhH---hhcCCCeEEEecccccccccCHHHHHHHHhcCCCccc
Confidence 456778999999999999953 222111 1233333322 235899999999999876532 12222222
Q ss_pred ccCC--Ccee---e-eeeE------e-----cCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHH
Q 024595 73 RKDS--RWLC---S-RSFI------L-----DAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDG 135 (265)
Q Consensus 73 ~~~~--~~~~---~-~~y~------~-----~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~ 135 (265)
+.++ .+.. . ..|. + ...-..+++||+..+...- .+ ......+.+.|..||+.
T Consensus 168 ~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~---------~~--~~~Ydwik~sq~~wl~~ 236 (379)
T KOG1432|consen 168 QVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKSVFNLYFLDSSSYTSVP---------PL--LPGYDWIKESQLEWLSD 236 (379)
T ss_pred cCCCcccceeeeecccceEEEeccCCCcccccCceeeEEEEecCCccccc---------cc--ccCccchhhhhHHHHhh
Confidence 2211 1110 0 0111 0 1123456778877653210 00 01122345789999998
Q ss_pred Hh----hc-C--CCCeEEEEeccccccCCC-------CCCh------HHHHHHHHHHHH-hCCccEEEeCCcccceEEee
Q 024595 136 AL----KN-S--KAKWKIVVGHHTIKSAGH-------HGVT------KELLLRLLPILE-ENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 136 ~l----~~-~--~~~~~iv~~H~P~~~~~~-------~~~~------~~~~~~l~~~~~-~~~v~~vl~GH~H~~~~~~~ 194 (265)
.. .. + ++.+-+++.|.|+..... -|.. ......++.+|. ..+|++|+|||.|....+..
T Consensus 237 ~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~ 316 (379)
T KOG1432|consen 237 TSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE 316 (379)
T ss_pred hhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecc
Confidence 87 22 1 233678999999853211 0110 011244666676 67999999999999987765
Q ss_pred -CCeEEEEeCCCC
Q 024595 195 -NGIEFLTSGGGS 206 (265)
Q Consensus 195 -~~~~~i~~g~~~ 206 (265)
.+..++|-|+|.
T Consensus 317 ~k~~~wlCygGga 329 (379)
T KOG1432|consen 317 LKGELWLCYGGGA 329 (379)
T ss_pred cCCeEEEEecCCC
Confidence 554666666554
No 26
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.58 E-value=1.1e-14 Score=111.63 Aligned_cols=60 Identities=18% Similarity=0.341 Sum_probs=44.8
Q ss_pred CeEEEEeccccccCCC-C----CC-hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEe
Q 024595 143 KWKIVVGHHTIKSAGH-H----GV-TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTS 202 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~-~----~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~ 202 (265)
+++||++|||+..... . +. .....+.+..++++.+|+++++||+|.......+++.++++
T Consensus 97 ~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~~~n 162 (166)
T cd07404 97 GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDYRIGGTRVLSN 162 (166)
T ss_pred CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceEEECCEEEEec
Confidence 5789999999987532 1 11 11334456777888899999999999998777788888764
No 27
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.55 E-value=2.7e-14 Score=114.75 Aligned_cols=169 Identities=18% Similarity=0.153 Sum_probs=90.2
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccC-CCCCCCceEEcCCCcccCCCccccccccccccCCCce---
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYT-APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWL--- 79 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~--- 79 (265)
.+.+.+||+||++||++.... . ....+. .+...+. ....++|+++++||||........... ... ..+.
T Consensus 36 ~~~~~~~d~i~~~GD~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~~~~~--~~~-~~~~~~~ 108 (223)
T cd00840 36 LAIEEKVDFVLIAGDLFDSNN-P--SPEALE-LLIEALRRLKEAGIPVFIIAGNHDSPSRLGALSPL--LAL-SGLHLVG 108 (223)
T ss_pred HHHhcCCCEEEECCcccCCCC-C--CHHHHH-HHHHHHHHHHHCCCCEEEecCCCCCccccccccch--Hhh-CcEEEEc
Confidence 345679999999999984321 1 111111 1121111 111378999999999987643221111 000 0010
Q ss_pred ------eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc-CCCCeEEEEeccc
Q 024595 80 ------CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN-SKAKWKIVVGHHT 152 (265)
Q Consensus 80 ------~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~-~~~~~~iv~~H~P 152 (265)
......++..++.+++++.... ....++.+++...+.. .+..+.|+++|+|
T Consensus 109 ~~~~~~~~~~~~~~~~~v~i~g~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~Il~~H~~ 166 (223)
T cd00840 109 VEEDVLTPLLLPKGGTGVAIYGLPYLRR----------------------SRLRDLLADAELRPRPLDPDDFNILLLHGG 166 (223)
T ss_pred ccCcceeEEEeccCCeEEEEEECCCCCH----------------------HHHHHHHHHHHHHhhccCCCCcEEEEEeee
Confidence 0111223445577776654321 1112334444444433 4667899999999
Q ss_pred cccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeC
Q 024595 153 IKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSG 203 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g 203 (265)
+.......... .......+...+++++++||.|..+.....+...+.+|
T Consensus 167 ~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~GH~H~~~~~~~~~~~~~ypG 215 (223)
T cd00840 167 VAGAGPSDSER--APFVPEALLPAGFDYVALGHIHRPQIILGGGPPIVYPG 215 (223)
T ss_pred eecCCCCcccc--cccCcHhhcCcCCCEEECCCcccCeeecCCCceEEeCC
Confidence 87554221110 12233445567899999999999987644555554444
No 28
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.54 E-value=3.6e-13 Score=115.01 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=63.8
Q ss_pred eeEec-CceE--EEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCC-CCe-EEEEeccccccCC
Q 024595 83 SFILD-AEIA--EFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSK-AKW-KIVVGHHTIKSAG 157 (265)
Q Consensus 83 ~y~~~-~~~~--~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~-~~~-~iv~~H~P~~~~~ 157 (265)
+|.|+ .+++ ++|+||+..+... .+.+ ....+.++++|++||+++|+..+ .++ +|+++|+|+.+..
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~-------~s~p---G~~~G~Ld~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~g 363 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHD-------GSHD---IHGHGSLDAKRWDWLKAELARGQADGQLMIIAAHIPIAVSP 363 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccc-------cCCC---CCcceeeCHHHHHHHHHHHHhCcCCCceEEEEeCCCcccCC
Confidence 57788 4644 9999999875321 0100 01134567899999999999865 444 4555555655321
Q ss_pred C-C----C--C--------hHHHHHHHHHHHHhC-CccEEEeCCcccceEE
Q 024595 158 H-H----G--V--------TKELLLRLLPILEEN-NVDMYVNGHDHCLQHI 192 (265)
Q Consensus 158 ~-~----~--~--------~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~ 192 (265)
. . . . ......+|..++.++ +|..+||||.|.....
T Consensus 364 i~~md~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v~ 414 (492)
T TIGR03768 364 IGSEMEWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNTVK 414 (492)
T ss_pred ccchhhhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccccc
Confidence 1 0 0 0 001124789999998 7999999999987754
No 29
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.53 E-value=3.5e-14 Score=106.26 Aligned_cols=59 Identities=27% Similarity=0.331 Sum_probs=43.2
Q ss_pred EEEeccccccCCCCCC-hHHHHHHHHHHHHhCCccEEEeCCcccceEEe----eCCeEEEEeCC
Q 024595 146 IVVGHHTIKSAGHHGV-TKELLLRLLPILEENNVDMYVNGHDHCLQHIS----SNGIEFLTSGG 204 (265)
Q Consensus 146 iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~----~~~~~~i~~g~ 204 (265)
|+++|+|+........ .....+.+.+++++++++++++||+|...... ..++.++++|+
T Consensus 81 iv~~Hhp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~~~~~~~~~~~aGs 144 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERLLDAGDALKLLAEAGVDLVLHGHKHVPYVGNISNAGGGLVVIGAGT 144 (144)
T ss_pred EEEecCCCCCCCccccccCCCHHHHHHHHHHcCCCEEEECCCCCcCeeeccCCCCCEEEEecCC
Confidence 8899999876543211 11134568899999999999999999988776 46777776654
No 30
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.48 E-value=3.3e-13 Score=108.52 Aligned_cols=141 Identities=23% Similarity=0.191 Sum_probs=75.7
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSF 84 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y 84 (265)
+++++||+|+++||+++... . ....+.+.+.. .....|+++++||||+...........+....-.++.....
T Consensus 28 ~~~~~~d~vl~~GD~~~~~~-~--~~~~~~~~l~~----l~~~~~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~ 100 (223)
T cd07385 28 INALKPDLVVLTGDLVDGSV-D--VLELLLELLKK----LKAPLGVYAVLGNHDYYSGDEENWIEALESAGITVLRNESV 100 (223)
T ss_pred HhccCCCEEEEcCcccCCcc-h--hhHHHHHHHhc----cCCCCCEEEECCCcccccCchHHHHHHHHHcCCEEeecCcE
Confidence 45578999999999994321 1 10122222222 12358999999999986543221011111111122222333
Q ss_pred EecCce--EEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc-CCCCeEEEEeccccccCCCCCC
Q 024595 85 ILDAEI--AEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN-SKAKWKIVVGHHTIKSAGHHGV 161 (265)
Q Consensus 85 ~~~~~~--~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~-~~~~~~iv~~H~P~~~~~~~~~ 161 (265)
.+..++ +.++.++... ....++.+.+.. .+..+.|+++|.|...
T Consensus 101 ~~~~~~~~i~i~G~~~~~---------------------------~~~~~~~~~~~~~~~~~~~I~l~H~P~~~------ 147 (223)
T cd07385 101 EISVGGATIGIAGVDDGL---------------------------GRRPDLEKALKGLDEDDPNILLAHQPDTA------ 147 (223)
T ss_pred EeccCCeEEEEEeccCcc---------------------------ccCCCHHHHHhCCCCCCCEEEEecCCChh------
Confidence 344333 3333322110 012234444544 4567899999997431
Q ss_pred hHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 162 TKELLLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
+ .+.+.+++++++||+|..+....
T Consensus 148 -----~----~~~~~~~dl~l~GHtHggqi~~~ 171 (223)
T cd07385 148 -----E----EAAAWGVDLQLSGHTHGGQIRLP 171 (223)
T ss_pred -----H----HhcccCccEEEeccCCCCEEecc
Confidence 1 12557899999999999986543
No 31
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.36 E-value=3.8e-12 Score=105.15 Aligned_cols=139 Identities=18% Similarity=0.158 Sum_probs=72.9
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcc--ccccccccccCCCceeee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVE--AQLSPVLTRKDSRWLCSR 82 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~ 82 (265)
+++.+||+|+++||++.... ......+.+.+..+. ...|+++|+||||+..... ......+.+.+-+.+.+.
T Consensus 76 i~~~~pDlVli~GD~~d~~~--~~~~~~~~~~L~~L~----~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi~lL~n~ 149 (271)
T PRK11340 76 GIEQKPDLILLGGDYVLFDM--PLNFSAFSDVLSPLA----ECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQ 149 (271)
T ss_pred HHhcCCCEEEEccCcCCCCc--cccHHHHHHHHHHHh----hcCCEEEecCCCCcccCccchHHHHHHHHhcCcEEeeCC
Confidence 45679999999999984111 111122222222221 1379999999999853211 011111222111222222
Q ss_pred eeEe--cCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC
Q 024595 83 SFIL--DAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG 160 (265)
Q Consensus 83 ~y~~--~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~ 160 (265)
...+ +...+.++++|..... ..+ ..+.+. +..++|++.|.|-.
T Consensus 150 ~~~i~~~~~~i~i~G~~d~~~~----------~~~-----------------~~~~~~--~~~~~IlL~H~P~~------ 194 (271)
T PRK11340 150 ATVIATPNRQFELVGTGDLWAG----------QCK-----------------PPPASE--ANLPRLVLAHNPDS------ 194 (271)
T ss_pred eEEEeeCCcEEEEEEecchhcc----------CCC-----------------hhHhcC--CCCCeEEEEcCCCh------
Confidence 2223 2234666666543210 000 011111 25678999999843
Q ss_pred ChHHHHHHHHHHHHhCCccEEEeCCcccceEEe
Q 024595 161 VTKELLLRLLPILEENNVDMYVNGHDHCLQHIS 193 (265)
Q Consensus 161 ~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~ 193 (265)
...+.+.+++++||||+|..+...
T Consensus 195 ---------~~~~~~~~~dL~lsGHTHGGQi~l 218 (271)
T PRK11340 195 ---------KEVMRDEPWDLMLCGHTHGGQLRV 218 (271)
T ss_pred ---------hHhhccCCCCEEEeccccCCeEEc
Confidence 112445789999999999988653
No 32
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.30 E-value=3.7e-10 Score=87.26 Aligned_cols=80 Identities=19% Similarity=0.311 Sum_probs=59.1
Q ss_pred HHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEec
Q 024595 168 RLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDV 247 (265)
Q Consensus 168 ~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~ 247 (265)
.+..++++.+++++++||+|.......+++.++..|+.+.+....- . .....|++++++++.+.+++++.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~~~g~~viNPGSv~~~~~~~~------~----~~~~syail~~~~~~~~~~~~~l 166 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFEHEGKFFINPGSATGAFSPLD------P----NVIPSFVLMDIQGSKVVTYVYQL 166 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEEECCEEEEECCCCCCCCCCCC------C----CCCCeEEEEEecCCeEEEEEEEE
Confidence 3444556678899999999999887778999999888775432100 0 12358999999999999999997
Q ss_pred CCCeEEEEEc
Q 024595 248 HGNILHKWSI 257 (265)
Q Consensus 248 ~g~~~~~~~i 257 (265)
.+..+....+
T Consensus 167 ~~~~~~~~~~ 176 (178)
T cd07394 167 IDGEVKVEKI 176 (178)
T ss_pred ECCcEEEEEe
Confidence 7776665544
No 33
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.27 E-value=2.6e-11 Score=93.73 Aligned_cols=112 Identities=18% Similarity=0.301 Sum_probs=72.2
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhh---cccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS---FTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS 81 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~ 81 (265)
+...+||+|+++||++. .|... .+.++.+. |..++.. ...+|++.++||||..+.......
T Consensus 38 ~~~l~PD~Vi~lGDL~D-~G~~~-~~~e~~e~l~Rf~~If~~-~~~~~~~~VpGNHDIG~~~~~~~~------------- 101 (195)
T cd08166 38 LNFVQPDIVIFLGDLMD-EGSIA-NDDEYYSYVQRFINIFEV-PNGTKIIYLPGDNDIGGEEEDPIE------------- 101 (195)
T ss_pred HhccCCCEEEEeccccC-CCCCC-CHHHHHHHHHHHHHHhcC-CCCCcEEEECCCCCcCCCCCCcCH-------------
Confidence 45579999999999994 44322 23344443 4444432 237999999999998652110000
Q ss_pred eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC
Q 024595 82 RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV 161 (265)
Q Consensus 82 ~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~ 161 (265)
+-++..++.. |+++|.|+.....
T Consensus 102 ----------------------------------------------~~v~RF~~~F--------i~lsH~P~~~~~~--- 124 (195)
T cd08166 102 ----------------------------------------------SKIRRFEKYF--------IMLSHVPLLAEGG--- 124 (195)
T ss_pred ----------------------------------------------HHHHHHHHhh--------eeeeccccccccc---
Confidence 0122222222 9999999865321
Q ss_pred hHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 162 TKELLLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
..+..++.++++.++++||.|.......
T Consensus 125 -----~~~~~~~~~~~p~~Ifs~H~H~s~~~~~ 152 (195)
T cd08166 125 -----QALKHVVTDLDPDLIFSAHRHKSSIFMY 152 (195)
T ss_pred -----HHHHHHHHhcCceEEEEcCccceeeEEe
Confidence 1456778888999999999999987655
No 34
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.27 E-value=4.1e-11 Score=95.65 Aligned_cols=180 Identities=20% Similarity=0.192 Sum_probs=87.4
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccc--c---ccccccccCCCc
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEA--Q---LSPVLTRKDSRW 78 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~--~---~~~~~~~~~~~~ 78 (265)
..++.+||+|+++||++. . ..+..+.+ ..+..|+++++||||....... . +...+...+...
T Consensus 20 ~l~~~~pD~Vl~~GDi~~-~------~~~~~~~l------~~l~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg~~~ 86 (238)
T cd07397 20 ALHLLQPDLVLFVGDFGN-E------SVQLVRAI------SSLPLPKAVILGNHDAWYDATFRKKGDRVQEQLELLGDLH 86 (238)
T ss_pred HHhccCCCEEEECCCCCc-C------hHHHHHHH------HhCCCCeEEEcCCCcccccccccchHHHHHHHHHHhCCcE
Confidence 345578999999999982 1 12222222 2346799999999998653211 0 110111111111
Q ss_pred eeeeeeE-ecCceEEEEEEeCccccc--cccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc-CCCCeEEEEeccccc
Q 024595 79 LCSRSFI-LDAEIAEFVFVDTTPFVD--EYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN-SKAKWKIVVGHHTIK 154 (265)
Q Consensus 79 ~~~~~y~-~~~~~~~~i~lds~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~-~~~~~~iv~~H~P~~ 154 (265)
. .+. .+.+...+-++-++.+.. .++..... --.+-++... ++-++.+-+.+.. ......|+++|.++.
T Consensus 87 l---~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~-vr~~fgi~s~----~eA~~~ive~~~~~~~~~~~VliaH~~~~ 158 (238)
T cd07397 87 C---GWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKA-VKAVYGVISL----EESAQRIIAAAKKAPPDLPLILLAHNGPS 158 (238)
T ss_pred E---eecccccCCCCeEEEeeCCccCCCccccCHHH-HHHHhCCCCH----HHHHHHHHHHhhhcCCCCCeEEEeCcCCc
Confidence 1 011 222333444455554321 11110000 0000011111 2334444444432 345568999999987
Q ss_pred cCCC---------------CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----------CCeEEEEeCC
Q 024595 155 SAGH---------------HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----------NGIEFLTSGG 204 (265)
Q Consensus 155 ~~~~---------------~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----------~~~~~i~~g~ 204 (265)
..+. .....++.+.+..+-....+.+|+.||.|..-+... .++.|+..++
T Consensus 159 G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a~ 233 (238)
T cd07397 159 GLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAAS 233 (238)
T ss_pred CCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcccccccccceeeecCCCeEEEeccc
Confidence 6531 011234444554444334589999999998833221 6777776543
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.27 E-value=1.3e-11 Score=93.47 Aligned_cols=76 Identities=25% Similarity=0.388 Sum_probs=55.8
Q ss_pred CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccce
Q 024595 143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELK 222 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~ 222 (265)
+..++++|.+++.... . .+.+...+...+++++++||+|.......+++.+++.|+.+.....
T Consensus 81 ~~~i~~~H~~~~~~~~--~----~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~~~~~Gs~~~~~~~----------- 143 (156)
T PF12850_consen 81 GFKILLSHGHPYDVQW--D----PAELREILSRENVDLVLHGHTHRPQVFKIGGIHVINPGSIGGPRHG----------- 143 (156)
T ss_dssp TEEEEEESSTSSSSTT--T----HHHHHHHHHHTTSSEEEESSSSSEEEEEETTEEEEEE-GSSS-SSS-----------
T ss_pred CCeEEEECCCCccccc--C----hhhhhhhhcccCCCEEEcCCcccceEEEECCEEEEECCcCCCCCCC-----------
Confidence 5588899987765431 1 2345567778899999999999999888899999998887755421
Q ss_pred eeecCCCeEEEEEeCC
Q 024595 223 LYYDGQGFMSVKMTRS 238 (265)
Q Consensus 223 ~~~~~~gy~~~~v~~~ 238 (265)
...+|++++++++
T Consensus 144 ---~~~~~~i~~~~~~ 156 (156)
T PF12850_consen 144 ---DQSGYAILDIEDK 156 (156)
T ss_dssp ---SSEEEEEEEETTT
T ss_pred ---CCCEEEEEEEecC
Confidence 2569999998753
No 36
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.26 E-value=2.8e-11 Score=93.69 Aligned_cols=197 Identities=16% Similarity=0.095 Sum_probs=98.9
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhh-------------------------hhcccccCCCCCCCceEEcCCCc
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFL-------------------------DSFTSIYTAPSLQKQWYNVLGNH 57 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~-------------------------~~~~~~~~~~~l~~p~~~i~GNH 57 (265)
++++..+||.|+++||+.-..+ ...+|. ..|.+. +..+.+|+++|||||
T Consensus 26 ~~~~e~~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~--L~~~~~p~~~vPG~~ 99 (255)
T PF14582_consen 26 EVIPEKGPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI--LGELGVPVFVVPGNM 99 (255)
T ss_dssp HHHHHHT-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH--HHCC-SEEEEE--TT
T ss_pred hhccccCCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH--HHhcCCcEEEecCCC
Confidence 3456679999999999982221 112333 011111 234689999999999
Q ss_pred ccCCCccccccccccc--cCCCcee-eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHH
Q 024595 58 DYRGDVEAQLSPVLTR--KDSRWLC-SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVD 134 (265)
Q Consensus 58 D~~~~~~~~~~~~~~~--~~~~~~~-~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~ 134 (265)
|.... ..+..++.. ..+.... -.+|.+-.+.+-++++........... .....| ..| ...|..
T Consensus 100 Dap~~--~~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~---~~~LrY------P~w---eaey~l 165 (255)
T PF14582_consen 100 DAPER--FFLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREE---EFKLRY------PAW---EAEYSL 165 (255)
T ss_dssp S-SHH--HHHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BC---SSS-EE------EHH---HHHHHH
T ss_pred CchHH--HHHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCccc---cccccc------hHH---HHHHHH
Confidence 97431 111111110 0011100 022332224567777766553321110 001111 112 355556
Q ss_pred HHhhcCCCCeEEEEecccc-ccCC-CCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCCCCCCC
Q 024595 135 GALKNSKAKWKIVVGHHTI-KSAG-HHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRG 211 (265)
Q Consensus 135 ~~l~~~~~~~~iv~~H~P~-~~~~-~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~~~~~~ 211 (265)
+.+...+...+|+++|.|+ ...+ .+... ..+..++++++..+|+|||.|....... +.+..+.-|
T Consensus 166 k~l~elk~~r~IlLfhtpPd~~kg~~h~GS----~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~TlVVNPG-------- 233 (255)
T PF14582_consen 166 KFLRELKDYRKILLFHTPPDLHKGLIHVGS----AAVRDLIKTYNPDIVLCGHIHESHGKESLGKTLVVNPG-------- 233 (255)
T ss_dssp GGGGGCTSSEEEEEESS-BTBCTCTBTTSB----HHHHHHHHHH--SEEEE-SSS-EE--EEETTEEEEE----------
T ss_pred HHHHhcccccEEEEEecCCccCCCcccccH----HHHHHHHHhcCCcEEEecccccchhhHHhCCEEEecCc--------
Confidence 7777776778899999999 3333 22222 4567899999999999999998875555 555555422
Q ss_pred CCCCCCCccceeeecCCCeEEEEEeCCeEEEE
Q 024595 212 DRNWWSPEELKLYYDGQGFMSVKMTRSEAVVL 243 (265)
Q Consensus 212 ~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~ 243 (265)
.+ ...+|.+|++.++++.+.
T Consensus 234 sL------------~~G~yAvI~l~~~~v~~g 253 (255)
T PF14582_consen 234 SL------------AEGDYAVIDLEQDKVEFG 253 (255)
T ss_dssp BG------------GGTEEEEEETTTTEEEEE
T ss_pred cc------------ccCceeEEEecccccccC
Confidence 11 246899999999888764
No 37
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=99.25 E-value=9.5e-11 Score=87.14 Aligned_cols=167 Identities=19% Similarity=0.192 Sum_probs=89.2
Q ss_pred CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecCc
Q 024595 10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDAE 89 (265)
Q Consensus 10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 89 (265)
=|.|++.||+.+... +.++.+++.-...|...-+++.||||++....+.+..+++.. -++.+..| ...
T Consensus 44 eDiVllpGDiSWaM~--------l~ea~~Dl~~i~~LPG~K~m~rGNHDYWw~s~skl~n~lp~~--l~~~n~~f--~l~ 111 (230)
T COG1768 44 EDIVLLPGDISWAMR--------LEEAEEDLRFIGDLPGTKYMIRGNHDYWWSSISKLNNALPPI--LFYLNNGF--ELL 111 (230)
T ss_pred hhEEEecccchhhee--------chhhhhhhhhhhcCCCcEEEEecCCccccchHHHHHhhcCch--Hhhhccce--eEe
Confidence 489999999986442 222222222223466778899999999876333332222211 11111111 122
Q ss_pred eEEEEEEeCccccccccCCCCCCCCCccccc-hhhhhHHHHHHHHHHHhhc-C--CCCeEEEEeccccccCCCCCChHHH
Q 024595 90 IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY-RRKEYLSDLLKDVDGALKN-S--KAKWKIVVGHHTIKSAGHHGVTKEL 165 (265)
Q Consensus 90 ~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~~wl~~~l~~-~--~~~~~iv~~H~P~~~~~~~~~~~~~ 165 (265)
+..+.+ ++-... + +.++.... ..+.+-..++..|+..+.+ . .-...|||+|+|+.+.....
T Consensus 112 n~aI~G--~RgW~s-----~---~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~----- 176 (230)
T COG1768 112 NYAIVG--VRGWDS-----P---SFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP----- 176 (230)
T ss_pred eEEEEE--eecccC-----C---CCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC-----
Confidence 222222 222111 0 11111111 1123334445556653332 1 33467899999998765322
Q ss_pred HHHHHHHHHhCCccEEEeCCcccceEEee-----CCeEEEEeCC
Q 024595 166 LLRLLPILEENNVDMYVNGHDHCLQHISS-----NGIEFLTSGG 204 (265)
Q Consensus 166 ~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-----~~~~~i~~g~ 204 (265)
..+.+++++++|..++.||.|.-.+-.. .||+|+.+.+
T Consensus 177 -~~~sevlee~rv~~~lyGHlHgv~~p~~~~s~v~Gi~y~Lvaa 219 (230)
T COG1768 177 -GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFSNVRGIEYMLVAA 219 (230)
T ss_pred -cchHHHHhhcceeeEEeeeccCCCCCCCCcccccCceEEEEec
Confidence 2456688899999999999998764322 6788876543
No 38
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=99.25 E-value=1.8e-11 Score=92.55 Aligned_cols=45 Identities=20% Similarity=0.318 Sum_probs=33.9
Q ss_pred EEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCC
Q 024595 146 IVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGS 206 (265)
Q Consensus 146 iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~ 206 (265)
|++.|.|.. .++.++++.+++|||+|....... +++..++..+.+
T Consensus 107 ~~l~H~p~~----------------~~~~~~~~~~~l~GH~H~~~~~~~~~~~~e~~~~~~~ 152 (156)
T cd08165 107 ILLQHFPLY----------------RLLQWLKPRLVLSGHTHSFCEVTHPDGTPEVTVPSFS 152 (156)
T ss_pred eeeeCChHH----------------HHHHhhCCCEEEEcccCCCceeEEECCEEEEEEecce
Confidence 889999852 145566788999999999766544 888888765543
No 39
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.24 E-value=2.3e-11 Score=93.32 Aligned_cols=57 Identities=30% Similarity=0.392 Sum_probs=35.9
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhh---hhcccccCCCC---CCCceEEcCCCcccCC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFL---DSFTSIYTAPS---LQKQWYNVLGNHDYRG 61 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~---~~~~~~~~~~~---l~~p~~~i~GNHD~~~ 61 (265)
+++++.+||+||++||+++ .+... ...++. +.|..++.... ..+|+++|+||||...
T Consensus 39 ~~i~~~~pd~vi~lGDl~d-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 39 TALQRLKPDVVLFLGDLFD-GGRIA-DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHHhcCCCEEEEeccccC-CcEeC-CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4556789999999999994 33221 112233 23334332222 2689999999999864
No 40
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.23 E-value=1.9e-10 Score=87.04 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=55.4
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL 223 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 223 (265)
.+|+++|.+....... .. . ..++++.+++++++||+|.......+++.++..|+.+.+..
T Consensus 76 ~~i~v~Hg~~~~~~~~---~~---~-~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~------------- 135 (155)
T cd00841 76 KRIFLTHGHLYGVKNG---LD---R-LYLAKEGGADVVLYGHTHIPVIEKIGGVLLLNPGSLSLPRG------------- 135 (155)
T ss_pred EEEEEECCcccccccc---hh---h-hhhhhhcCCCEEEECcccCCccEEECCEEEEeCCCccCcCC-------------
Confidence 4678888876543211 01 1 34456678999999999999877778999998888775431
Q ss_pred eecCCCeEEEEEeCCeEEEEE
Q 024595 224 YYDGQGFMSVKMTRSEAVVLF 244 (265)
Q Consensus 224 ~~~~~gy~~~~v~~~~i~~~~ 244 (265)
....+|+++++++ ++++++
T Consensus 136 -~~~~~~~i~~~~~-~~~~~~ 154 (155)
T cd00841 136 -GGPPTYAILEIDD-KGEVEI 154 (155)
T ss_pred -CCCCeEEEEEecC-CCcEEE
Confidence 1356999999987 666654
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.23 E-value=3.6e-11 Score=87.69 Aligned_cols=36 Identities=28% Similarity=0.521 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCccEEEeCCcccceEEe--eCCeEEEE
Q 024595 166 LLRLLPILEENNVDMYVNGHDHCLQHIS--SNGIEFLT 201 (265)
Q Consensus 166 ~~~l~~~~~~~~v~~vl~GH~H~~~~~~--~~~~~~i~ 201 (265)
...+..++...+++++++||+|...... ..++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~~~~v~ 129 (131)
T cd00838 92 SEALLELLEKYGVDLVLSGHTHVYERREPDGGGTLYIN 129 (131)
T ss_pred HHHHHHHHHHhCCCEEEeCCeeccccccCCCCceEEec
Confidence 4566778888899999999999998776 35555554
No 42
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=99.20 E-value=4.2e-10 Score=97.12 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=58.0
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----CCeEEEEeCCCCCCCCCCCCCCC
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----NGIEFLTSGGGSKAWRGDRNWWS 217 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----~~~~~i~~g~~~~~~~~~~~~~~ 217 (265)
..+.|++.|.......... ... ..++ ...+++|+.||.|....... .+...+.+ |+....+..
T Consensus 200 ~~fnIlv~Hq~~~~~~~~~---~ip---e~ll-p~~fDYValGHiH~~~~~p~~~~~~~~~V~yp--GS~v~tSf~---- 266 (405)
T TIGR00583 200 DWFNLLVLHQNHAAHTSTS---FLP---ESFI-PDFFDLVIWGHEHECLPDPVYNPSDGFYVLQP--GSTVATSLT---- 266 (405)
T ss_pred CceEEEEeCceecCCCCcc---cCc---hhhh-hccCcEEEecccccccccccccCCCCceEEEC--CCccccccc----
Confidence 4568999999864322111 011 2233 34699999999998764321 22222222 221111110
Q ss_pred CccceeeecCCCeEEEEEeCCeEEEEEEecC-CCeEEEEEcc
Q 024595 218 PEELKLYYDGQGFMSVKMTRSEAVVLFYDVH-GNILHKWSIP 258 (265)
Q Consensus 218 ~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~-g~~~~~~~i~ 258 (265)
. -.....|+.+++++++.++++++... -+++...++.
T Consensus 267 e----~E~~~Kgv~lVeI~~~~~~~~~IpL~~vRpf~~~~i~ 304 (405)
T TIGR00583 267 P----GEALPKHVFILNIKGRKFASKPIPLQTVRPFVMKEIL 304 (405)
T ss_pred c----cccCCCEEEEEEEcCCeeEEEEeeCCCcccEEEEEEE
Confidence 0 01246899999999889999999854 6777766554
No 43
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.14 E-value=3.2e-10 Score=83.79 Aligned_cols=59 Identities=17% Similarity=0.034 Sum_probs=38.2
Q ss_pred eEEEEeccccccCCCCCCh--HHHHHHHHHHHHhCCccEEEeCCcccceEEe-----eCCeEEEEe
Q 024595 144 WKIVVGHHTIKSAGHHGVT--KELLLRLLPILEENNVDMYVNGHDHCLQHIS-----SNGIEFLTS 202 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~--~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-----~~~~~~i~~ 202 (265)
+.|+++|.|+++....... ..-...+..++++.+++++++||+|...... ..++.+++.
T Consensus 69 ~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~t~~in~ 134 (135)
T cd07379 69 TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVLDTDGETLFVNA 134 (135)
T ss_pred CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEecccCCCEEEEeC
Confidence 3578889888764321110 0112446667788889999999999996433 367777653
No 44
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.13 E-value=2.5e-09 Score=81.23 Aligned_cols=78 Identities=19% Similarity=0.268 Sum_probs=52.3
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL 223 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 223 (265)
.+++++|..++... .. ...+..+.+..+++++++||+|........++.++..|+.+.....
T Consensus 79 ~~i~l~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~~~~~------------ 140 (158)
T TIGR00040 79 IDFGLVHGDLVYPR--GD----LLVLEYLAKELGVDVLIFGHTHIPVAEELRGILLINPGSLTGPRNG------------ 140 (158)
T ss_pred EEEEEEeCcccccC--CC----HHHHHHHHhccCCCEEEECCCCCCccEEECCEEEEECCccccccCC------------
Confidence 46788886542211 11 1233444555688999999999998777789999888776643210
Q ss_pred eecCCCeEEEEEeCCeEE
Q 024595 224 YYDGQGFMSVKMTRSEAV 241 (265)
Q Consensus 224 ~~~~~gy~~~~v~~~~i~ 241 (265)
...+|.+++++++.++
T Consensus 141 --~~~~~~il~~~~~~~~ 156 (158)
T TIGR00040 141 --NTPSYAILDVDKDKVT 156 (158)
T ss_pred --CCCeEEEEEecCCeEE
Confidence 1458999999887665
No 45
>PHA02546 47 endonuclease subunit; Provisional
Probab=99.10 E-value=9.2e-10 Score=93.82 Aligned_cols=55 Identities=20% Similarity=0.221 Sum_probs=33.3
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhh--cccccCCCCCCCceEEcCCCcccC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS--FTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
+.+++++||+||++||++............+... +..+ ...++|+++++||||..
T Consensus 33 ~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L---~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 33 EYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLL---KEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHH---HHCCCeEEEEccCCCcc
Confidence 3466789999999999984321111111112211 2221 23479999999999974
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.06 E-value=9.7e-10 Score=80.43 Aligned_cols=27 Identities=15% Similarity=0.340 Sum_probs=22.1
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEEe
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHIS 193 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~ 193 (265)
+.+.+++.+++++++++||+|......
T Consensus 81 ~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 81 EAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred HHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 456677888899999999999887654
No 47
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.05 E-value=5.6e-09 Score=81.28 Aligned_cols=193 Identities=13% Similarity=0.127 Sum_probs=104.0
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhh---cccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCce
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS---FTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWL 79 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~ 79 (265)
..++..++|+++++||++|.+- .+...... ++. .....+|++++|||=|-..-. ..+. . .....
T Consensus 24 ~~~~~~~~D~lviaGDlt~~~~----~~~~~~~~~~~~e~---l~~~~~~v~avpGNcD~~~v~-~~l~----~-~~~~v 90 (226)
T COG2129 24 NAAADIRADLLVIAGDLTYFHF----GPKEVAEELNKLEA---LKELGIPVLAVPGNCDPPEVI-DVLK----N-AGVNV 90 (226)
T ss_pred HHHhhccCCEEEEecceehhhc----CchHHHHhhhHHHH---HHhcCCeEEEEcCCCChHHHH-HHHH----h-ccccc
Confidence 3455668999999999993221 11111111 122 234689999999997753311 1111 1 11111
Q ss_pred eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHH-HHHHHHHhhcCCCCeEEEEeccccccCCC
Q 024595 80 CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDL-LKDVDGALKNSKAKWKIVVGHHTIKSAGH 158 (265)
Q Consensus 80 ~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q-~~wl~~~l~~~~~~~~iv~~H~P~~~~~~ 158 (265)
.++ .+..+++.|+.+-..-. + +| .+...+.+++ ..-+++.+....+..+|+++|.||+....
T Consensus 91 ~~~--v~~i~~~~~~G~Ggsn~----------t--p~---nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~HaPP~gt~~ 153 (226)
T COG2129 91 HGR--VVEIGGYGFVGFGGSNP----------T--PF---NTPREFSEDEIYSKLKSLVKKADNPVNILLTHAPPYGTLL 153 (226)
T ss_pred ccc--eEEecCcEEEEecccCC----------C--CC---CCccccCHHHHHHHHHHHHhcccCcceEEEecCCCCCccc
Confidence 111 12334555555322110 0 00 0011222233 33344444443333339999999987542
Q ss_pred C--CChHHH-HHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEE
Q 024595 159 H--GVTKEL-LLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVK 234 (265)
Q Consensus 159 ~--~~~~~~-~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~ 234 (265)
. ...... ...+..++++.++.+.+|||.|-...... +++..+.-|. .....|++++
T Consensus 154 d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~TivVNPG~--------------------~~~g~yA~i~ 213 (226)
T COG2129 154 DTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGNTIVVNPGP--------------------LGEGRYALIE 213 (226)
T ss_pred cCCCCccccchHHHHHHHHHhCCceEEEeeecccccccccCCeEEECCCC--------------------ccCceEEEEE
Confidence 2 110111 25678899999999999999998766655 4555554222 1356889999
Q ss_pred EeCCeEEEEEE
Q 024595 235 MTRSEAVVLFY 245 (265)
Q Consensus 235 v~~~~i~~~~~ 245 (265)
+++..++.+.+
T Consensus 214 l~~~~Vk~~~~ 224 (226)
T COG2129 214 LEKEVVKLEQF 224 (226)
T ss_pred ecCcEEEEEEe
Confidence 99998877654
No 48
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=99.04 E-value=2.7e-10 Score=87.98 Aligned_cols=54 Identities=24% Similarity=0.307 Sum_probs=35.4
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhh---cccccCCCC----------------CCCceEEcCCCcccCC
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDS---FTSIYTAPS----------------LQKQWYNVLGNHDYRG 61 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~---~~~~~~~~~----------------l~~p~~~i~GNHD~~~ 61 (265)
....+||.|+++||++ +.++. .+.+|.+. |..++.... -++|++.|+||||...
T Consensus 40 ~~~l~Pd~V~fLGDLf-d~~w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 40 QFWLKPDAVVVLGDLF-SSQWI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHhcCCCEEEEecccc-CCCcc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3457999999999999 44554 34444433 333331111 1489999999999854
No 49
>PRK09453 phosphodiesterase; Provisional
Probab=99.03 E-value=9.3e-09 Score=79.99 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=46.2
Q ss_pred hCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe-cCCCeEE
Q 024595 175 ENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNILH 253 (265)
Q Consensus 175 ~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~~~ 253 (265)
..+.+++++||+|.......+++.+++.|+.+.+. + .....|+++++. +++.++ ..|+++-
T Consensus 116 ~~~~d~vi~GHtH~p~~~~~~~~~~iNpGs~~~p~-~-------------~~~~s~~il~~~----~~~~~~~~~~~~~~ 177 (182)
T PRK09453 116 LHDGDVLVYGHTHIPVAEKQGGIILFNPGSVSLPK-G-------------GYPASYGILDDN----VLSVIDLEGGEVIA 177 (182)
T ss_pred ccCCCEEEECCCCCCcceEECCEEEEECCCccccC-C-------------CCCCeEEEEECC----cEEEEECCCCeEEE
Confidence 34679999999999887777899999988876442 1 123478888873 445566 5667777
Q ss_pred EEEc
Q 024595 254 KWSI 257 (265)
Q Consensus 254 ~~~i 257 (265)
+..|
T Consensus 178 ~~~~ 181 (182)
T PRK09453 178 QVAI 181 (182)
T ss_pred eecc
Confidence 6654
No 50
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.93 E-value=3.6e-09 Score=85.31 Aligned_cols=57 Identities=18% Similarity=0.360 Sum_probs=37.4
Q ss_pred cccCCCEEEecCCccCCCCCCC-----------------CCChhhhhhcccccCCCC-----CCCceEEcCCCcccCCC
Q 024595 6 EKLEIDFVISTGDNFYEDGLTG-----------------EEDPAFLDSFTSIYTAPS-----LQKQWYNVLGNHDYRGD 62 (265)
Q Consensus 6 ~~~~pd~vv~~GD~~~~~g~~~-----------------~~~~~~~~~~~~~~~~~~-----l~~p~~~i~GNHD~~~~ 62 (265)
.+.+|||+|++||.||.++... .....+++.+......+. .++|+++++++||+.++
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n 104 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDN 104 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccc
Confidence 4679999999999999886421 111233333333222211 26899999999999865
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.93 E-value=8.6e-09 Score=83.25 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=28.9
Q ss_pred HHHHHHHhCCccEEEeCCcccceEEeeC----CeEEEEeCCC
Q 024595 168 RLLPILEENNVDMYVNGHDHCLQHISSN----GIEFLTSGGG 205 (265)
Q Consensus 168 ~l~~~~~~~~v~~vl~GH~H~~~~~~~~----~~~~i~~g~~ 205 (265)
.+..++++++++++++||+|........ +..|++.|..
T Consensus 176 ~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW 217 (231)
T TIGR01854 176 EVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW 217 (231)
T ss_pred HHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC
Confidence 3566677789999999999999866543 5678876654
No 52
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.90 E-value=1.6e-08 Score=83.61 Aligned_cols=52 Identities=27% Similarity=0.273 Sum_probs=32.4
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCC
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD 62 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~ 62 (265)
..++.||+|+++||++.... ......+......+ ....++++++||||+...
T Consensus 69 i~~~~~DlivltGD~~~~~~--~~~~~~~~~~L~~L----~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 69 IANELPDLIVLTGDYVDGDR--PPGVAALALFLAKL----KAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred HHhcCCCEEEEEeeeecCCC--CCCHHHHHHHHHhh----hccCCEEEEecccccccc
Confidence 45567899999999994211 11112232222221 235689999999999764
No 53
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.87 E-value=1.1e-08 Score=89.13 Aligned_cols=55 Identities=24% Similarity=0.364 Sum_probs=36.9
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~ 61 (265)
+.|++.++||||++||+++ .+.++.+. .++.+.+..+ ...++|+++|+||||...
T Consensus 34 ~~a~~~~vD~vliAGDlFd-~~~Ps~~a~~~~~~~l~~l---~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 34 EIAKEEKVDFVLIAGDLFD-TNNPSPRALKLFLEALRRL---KDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred HHHHHccCCEEEEcccccc-CCCCCHHHHHHHHHHHHHh---ccCCCcEEEecCCCCchh
Confidence 4677889999999999884 44333221 2233333332 236799999999999754
No 54
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.86 E-value=2.3e-07 Score=70.81 Aligned_cols=87 Identities=22% Similarity=0.238 Sum_probs=61.9
Q ss_pred CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccce
Q 024595 143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELK 222 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~ 222 (265)
..+|+++|.-.+.... . ...+..+.++.+.++++.||+|.......+++.+++-|+.+.+..+
T Consensus 81 g~ki~l~HGh~~~~~~--~----~~~l~~la~~~~~Dvli~GHTH~p~~~~~~~i~~vNPGS~s~pr~~----------- 143 (172)
T COG0622 81 GVKIFLTHGHLYFVKT--D----LSLLEYLAKELGADVLIFGHTHKPVAEKVGGILLVNPGSVSGPRGG----------- 143 (172)
T ss_pred CEEEEEECCCcccccc--C----HHHHHHHHHhcCCCEEEECCCCcccEEEECCEEEEcCCCcCCCCCC-----------
Confidence 3467788864433111 1 1233445556789999999999999999999999988777655432
Q ss_pred eeecCCCeEEEEEeCCeEEEEEEecCC
Q 024595 223 LYYDGQGFMSVKMTRSEAVVLFYDVHG 249 (265)
Q Consensus 223 ~~~~~~gy~~~~v~~~~i~~~~~~~~g 249 (265)
...+|+++++++.++++.+++...
T Consensus 144 ---~~~sy~il~~~~~~~~~~~~~~~~ 167 (172)
T COG0622 144 ---NPASYAILDVDNLEVEVLFLERDR 167 (172)
T ss_pred ---CCcEEEEEEcCCCEEEEEEeeccc
Confidence 134899999999999988876543
No 55
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.86 E-value=2.9e-08 Score=86.39 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=41.8
Q ss_pred CccEEEeCCcccceEEe-eCCeEEEEeCCCCCCCCCCCCCCCCccceee--ecCCCeEEEEEeCC-eEEEEEEe-cCCCe
Q 024595 177 NVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRNWWSPEELKLY--YDGQGFMSVKMTRS-EAVVLFYD-VHGNI 251 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~--~~~~gy~~~~v~~~-~i~~~~~~-~~g~~ 251 (265)
.+++|..||.|..+... ...+.| +|+ +.++ .|. ....|+.+|+++++ ..+++.+. ...+.
T Consensus 220 ~~dYvALGHlH~~Q~v~~~~~vrY----sGS------pl~~-----sFsE~~~~K~v~lVel~~~~~~~v~~i~l~~~~~ 284 (407)
T PRK10966 220 PADYIALGHIHRAQKVGGTEHIRY----SGS------PIPL-----SFDELGKSKSVHLVEFDQGKLQSVTPLPVPVFQP 284 (407)
T ss_pred ccCeeeccccccCcCCCCCCcEEE----cCC------CCCC-----CccccCCCCeEEEEEEcCCccceEEEEECCCCce
Confidence 47999999999998773 244555 222 1111 111 13579999999866 56788887 44566
Q ss_pred EEEEE
Q 024595 252 LHKWS 256 (265)
Q Consensus 252 ~~~~~ 256 (265)
+.+++
T Consensus 285 l~~~~ 289 (407)
T PRK10966 285 MAVLK 289 (407)
T ss_pred eEEec
Confidence 66654
No 56
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.86 E-value=1.4e-08 Score=82.61 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEEee--C--CeEEEEeCCC
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHISS--N--GIEFLTSGGG 205 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~~--~--~~~~i~~g~~ 205 (265)
+.+.+++++++++++++||+|....... . +..+++.|..
T Consensus 177 ~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw 219 (241)
T PRK05340 177 EAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW 219 (241)
T ss_pred HHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC
Confidence 4566788889999999999999865433 2 2356665543
No 57
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.79 E-value=1e-08 Score=82.05 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCC
Q 024595 166 LLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGG 204 (265)
Q Consensus 166 ~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~ 204 (265)
...+..++++++++++++||+|........++.|+++|+
T Consensus 178 ~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~n~G~ 216 (217)
T cd07398 178 EEAVARLARRKGVDGVICGHTHRPALHELDGKLYINLGD 216 (217)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCeEEECCEEEEECCC
Confidence 345566677889999999999999888888899988775
No 58
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.74 E-value=1.4e-07 Score=78.43 Aligned_cols=73 Identities=19% Similarity=0.210 Sum_probs=43.1
Q ss_pred HHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEE-eeCCeEEEEeC
Q 024595 129 LLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHI-SSNGIEFLTSG 203 (265)
Q Consensus 129 Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~-~~~~~~~i~~g 203 (265)
.+++..+.|++.+...+|+++|........... ..+.....+.++ .+|+++++||+|..... ..+++..+.+|
T Consensus 171 ~~~~~v~~lr~~~~D~IIvl~H~g~~~~~~~~~--~~~~~~~~la~~~~~vD~IlgGHsH~~~~~~~~~~~~v~q~g 245 (277)
T cd07410 171 TAKKYVPKLRAEGADVVVVLAHGGFERDLEESL--TGENAAYELAEEVPGIDAILTGHQHRRFPGPTVNGVPVVQPG 245 (277)
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCcCCCccccc--CCccHHHHHHhcCCCCcEEEeCCCccccccCCcCCEEEEcCC
Confidence 355555556554567899999997654321101 001122344444 48999999999987654 33556555433
No 59
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.71 E-value=1.5e-06 Score=71.30 Aligned_cols=56 Identities=23% Similarity=0.439 Sum_probs=36.8
Q ss_pred hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595 137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHISSNGIEFLTSGGG 205 (265)
Q Consensus 137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~ 205 (265)
+.+.+...+|+++|.+... . ..++++ .+|+++|+||+|.......+++..+.+|+.
T Consensus 167 ~~~~~~D~iVvl~H~g~~~--------d-----~~la~~~~~iD~IlgGH~H~~~~~~~~~t~vv~~g~~ 223 (257)
T cd07406 167 LREQGADLIIALTHMRLPN--------D-----KRLAREVPEIDLILGGHDHEYILVQVGGTPIVKSGSD 223 (257)
T ss_pred HHhCCCCEEEEEeccCchh--------h-----HHHHHhCCCCceEEecccceeEeeeECCEEEEeCCcC
Confidence 3445677889999996421 1 123333 479999999999988555567666654433
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.66 E-value=2e-07 Score=76.17 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=83.7
Q ss_pred cCCCEEEecCCccCCCCCCCCCChh---------hhhhcccccC-CCCCCCceEEcCCCcccCCCccccccccccccCCC
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPA---------FLDSFTSIYT-APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSR 77 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~---------~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~ 77 (265)
.++|+||++||+.- .. ...+.+ ....|...+. ....++|+++|.||||-...... + . ...
T Consensus 27 ~~~D~lI~~GDf~~-~~--~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~~~l~~-l----~--~gg 96 (262)
T cd00844 27 TKVDLLICCGDFQA-VR--NEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEASNYLWE-L----P--YGG 96 (262)
T ss_pred CCCcEEEEcCCCCC-cC--CcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCHHHHHh-h----c--CCC
Confidence 47999999999751 11 111110 0111222222 23367889999999995332211 0 0 122
Q ss_pred ceeeeeeE------ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHH-------HHhhcCCCCe
Q 024595 78 WLCSRSFI------LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVD-------GALKNSKAKW 144 (265)
Q Consensus 78 ~~~~~~y~------~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~-------~~l~~~~~~~ 144 (265)
|..++-|. +...+++|..|....-...+.... .....+ .++++..+- ..|.......
T Consensus 97 ~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~-~~~~~~---------t~~~~rs~y~~r~~~~~kl~~~~~~v 166 (262)
T cd00844 97 WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH-FERPPY---------SEDTKRSAYHVRNIEVFKLKQLKQPI 166 (262)
T ss_pred eecCcEEEecCCCEEEECCeEEEEeccccccccccccc-ccCCCC---------CHHHHHHhhhhhHHHHHHHHhcCCCC
Confidence 33332222 334678888886643211111000 000111 122222210 1122223345
Q ss_pred EEEEeccccccCCCCCChHH----------------H-HHHHHHHHHhCCccEEEeCCcccceE
Q 024595 145 KIVVGHHTIKSAGHHGVTKE----------------L-LLRLLPILEENNVDMYVNGHDHCLQH 191 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~~~~----------------~-~~~l~~~~~~~~v~~vl~GH~H~~~~ 191 (265)
=|+++|.|+.....++.... . ...+..++++.+.++.|+||.|....
T Consensus 167 DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~ 230 (262)
T cd00844 167 DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFA 230 (262)
T ss_pred cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccc
Confidence 69999999988765444211 0 13466788889999999999999554
No 61
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.55 E-value=1.4e-07 Score=77.16 Aligned_cols=54 Identities=22% Similarity=0.284 Sum_probs=32.8
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCC-CceEEcCCCcccCC
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQ-KQWYNVLGNHDYRG 61 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~-~p~~~i~GNHD~~~ 61 (265)
.+.+++||+|+++||++. ...++... ..+.+.+..+ .... +|+++|+||||...
T Consensus 34 ~~~~~~~D~lli~GDi~d-~~~p~~~~~~~~~~~l~~l---~~~~~i~v~~i~GNHD~~~ 89 (253)
T TIGR00619 34 FAKAEQIDALLVAGDVFD-TANPPAEAQELFNAFFRNL---SDANPIPIVVISGNHDSAQ 89 (253)
T ss_pred HHHHcCCCEEEECCccCC-CCCCCHHHHHHHHHHHHHH---HhcCCceEEEEccCCCChh
Confidence 456679999999999984 32221110 1112222222 1233 89999999999854
No 62
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.49 E-value=5e-07 Score=79.63 Aligned_cols=172 Identities=19% Similarity=0.213 Sum_probs=90.0
Q ss_pred ccccC-CCEEEecCCccCCCCCCCCCChhhh--hhcccccCCCCCCCceEEcCCCcccCCC--cc-----cc--cccccc
Q 024595 5 GEKLE-IDFVISTGDNFYEDGLTGEEDPAFL--DSFTSIYTAPSLQKQWYNVLGNHDYRGD--VE-----AQ--LSPVLT 72 (265)
Q Consensus 5 ~~~~~-pd~vv~~GD~~~~~g~~~~~~~~~~--~~~~~~~~~~~l~~p~~~i~GNHD~~~~--~~-----~~--~~~~~~ 72 (265)
.+..+ +|+|+.+||++-.+.+.-..+..+. ..+...+..---.+|+|+..||||.... +. .. ...++.
T Consensus 205 ke~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~ 284 (577)
T KOG3770|consen 205 KENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYK 284 (577)
T ss_pred HhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHH
Confidence 44455 9999999998832222110101000 0011111111127999999999997531 00 00 000011
Q ss_pred cc---CCCce---------eeeeeE-ecCceEEEEEEeCccccc-cccCCCCCCCCCccccchhhhhHHHHHHHHHHHhh
Q 024595 73 RK---DSRWL---------CSRSFI-LDAEIAEFVFVDTTPFVD-EYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALK 138 (265)
Q Consensus 73 ~~---~~~~~---------~~~~y~-~~~~~~~~i~lds~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~ 138 (265)
.. -..|+ .+.+|. ...++.++|.||+..... +++... +... -.+|++|+..+|.
T Consensus 285 ~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~-------n~td-----p~~~lqWf~~~L~ 352 (577)
T KOG3770|consen 285 HLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYA-------NQTD-----PIDQLQWFVDQLQ 352 (577)
T ss_pred HHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeee-------cCCC-----chHHhhHHHHHHH
Confidence 11 12232 123454 335899999999986422 111111 1111 1367999999998
Q ss_pred cC--CCCeEEEEeccccccCC-CCCChHHHHHHHHHHHHhC--CccEEEeCCcccceEE
Q 024595 139 NS--KAKWKIVVGHHTIKSAG-HHGVTKELLLRLLPILEEN--NVDMYVNGHDHCLQHI 192 (265)
Q Consensus 139 ~~--~~~~~iv~~H~P~~~~~-~~~~~~~~~~~l~~~~~~~--~v~~vl~GH~H~~~~~ 192 (265)
.+ ....+=++.|.|+-... ..+.. ..+..++.++ -|...+.||+|.....
T Consensus 353 ~ae~~GekVhil~HIPpG~~~c~~~ws----~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 353 EAESAGEKVHILGHIPPGDGVCLEGWS----INFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HHHhcCCEEEEEEeeCCCCcchhhhhh----HHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 74 45566799999985422 12222 2233444443 2567799999998744
No 63
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.45 E-value=6.3e-08 Score=76.25 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~ 206 (265)
+.....+.+++|+.+++||+|.......+++.|++.|+.-
T Consensus 177 ~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~lGdW~ 216 (237)
T COG2908 177 AAVADEARRHGVDGVIHGHTHRPAIHNIPGITYINLGDWV 216 (237)
T ss_pred HHHHHHHHHcCCCEEEecCcccHhhccCCCceEEecCcch
Confidence 4456677889999999999999998888889999877553
No 64
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.37 E-value=1.9e-05 Score=65.08 Aligned_cols=57 Identities=14% Similarity=0.297 Sum_probs=34.3
Q ss_pred HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEe---eCCeEEEEeC
Q 024595 134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHIS---SNGIEFLTSG 203 (265)
Q Consensus 134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~---~~~~~~i~~g 203 (265)
.+.+.+.+...+|+++|.+... + ..+.++ .+|+++|+||+|...... .+++..+.+|
T Consensus 176 ~~~~~~~~~D~iI~l~H~g~~~--------~-----~~la~~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g 236 (264)
T cd07411 176 VKLRREEGVDVVVLLSHNGLPV--------D-----VELAERVPGIDVILSGHTHERTPKPIIAGGGTLVVEAG 236 (264)
T ss_pred HHHHHhCCCCEEEEEecCCchh--------h-----HHHHhcCCCCcEEEeCcccccccCcccccCCEEEEEcC
Confidence 3333344667889999986421 1 122333 479999999999765322 2556555443
No 65
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.30 E-value=1.4e-05 Score=65.36 Aligned_cols=51 Identities=25% Similarity=0.373 Sum_probs=32.9
Q ss_pred CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEE--eeCCeEEEEeC
Q 024595 140 SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHI--SSNGIEFLTSG 203 (265)
Q Consensus 140 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~--~~~~~~~i~~g 203 (265)
.+...+|+++|.+... .. .++++ .++++|++||+|..... ..+++..+.+|
T Consensus 169 ~~~D~vIvl~H~g~~~----------~~---~la~~~~giDlvlggH~H~~~~~~~~~~~~~v~~~g 222 (252)
T cd00845 169 EGADVIILLSHLGLDD----------DE---ELAEEVPGIDVILGGHTHHLLEEPEVVNGTLIVQAG 222 (252)
T ss_pred CCCCEEEEEeccCccc----------hH---HHHhcCCCccEEEcCCcCcccCCCcccCCEEEEeCC
Confidence 4567889999987542 11 12222 58999999999987643 23566655433
No 66
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.25 E-value=5.3e-05 Score=62.21 Aligned_cols=61 Identities=20% Similarity=0.320 Sum_probs=36.8
Q ss_pred HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEe---eCCeEEEE
Q 024595 134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHIS---SNGIEFLT 201 (265)
Q Consensus 134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~---~~~~~~i~ 201 (265)
...+.+.+...+|+++|.+......... .. .+.++ .+++++|.||+|...... .+++..+.
T Consensus 164 v~~l~~~~~D~iIvl~H~G~~~~~~~~~----~~---~la~~~~giDvIigGH~H~~~~~~~~~~~~~~ivq 228 (257)
T cd07408 164 VAALKAKGADVIVALGHLGVDRTSSPWT----ST---ELAANVTGIDLIIDGHSHTTIEIGKKDGNNVLLTQ 228 (257)
T ss_pred HHHHHhCCCCEEEEEeCcCcCCCCCCcc----HH---HHHHhCCCceEEEeCCCcccccCcccccCCeEEEc
Confidence 4444445677899999997654321111 11 22323 479999999999987543 24554443
No 67
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.24 E-value=1.2e-06 Score=74.66 Aligned_cols=91 Identities=22% Similarity=0.276 Sum_probs=54.8
Q ss_pred ccCCCEEEecCCccCCCCCCCCCChhhhhhc---ccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeee
Q 024595 7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSF---TSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRS 83 (265)
Q Consensus 7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~---~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (265)
-.+||.++++||++. .|.- ..+++|.+.+ ..++. .+..+|++.++||||.+... +........... ...+..
T Consensus 91 ~lkPdvvffLGDLfD-eG~~-~~~eEf~~~~~RfkkIf~-~k~~~~~~~i~GNhDIGf~~-~~~~~~i~Rfe~-~fg~~~ 165 (410)
T KOG3662|consen 91 RLKPDVVFFLGDLFD-EGQW-AGDEEFKKRYERFKKIFG-RKGNIKVIYIAGNHDIGFGN-ELIPEWIDRFES-VFGPTE 165 (410)
T ss_pred ccCCCEEEEeccccc-cCcc-CChHHHHHHHHHHHHhhC-CCCCCeeEEeCCcccccccc-ccchhHHHHHHH-hhcchh
Confidence 369999999999993 3422 2345665544 44443 23579999999999996532 111110000000 111233
Q ss_pred eEecCceEEEEEEeCcccc
Q 024595 84 FILDAEIAEFVFVDTTPFV 102 (265)
Q Consensus 84 y~~~~~~~~~i~lds~~~~ 102 (265)
..++.++..|+++|+....
T Consensus 166 r~f~v~~~tf~~~d~~~ls 184 (410)
T KOG3662|consen 166 RRFDVGNLTFVMFDSNALS 184 (410)
T ss_pred hhhccCCceeEEeeehhhc
Confidence 4577788899999988754
No 68
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.23 E-value=2.3e-05 Score=65.47 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=40.9
Q ss_pred HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh--CCccEEEeCCcccceEE---eeCCeEEEEeCCCC
Q 024595 134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE--NNVDMYVNGHDHCLQHI---SSNGIEFLTSGGGS 206 (265)
Q Consensus 134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~--~~v~~vl~GH~H~~~~~---~~~~~~~i~~g~~~ 206 (265)
.+.|++.+...+|+++|.................+...++.+ .+++++++||+|..... ..+++..+.+|+-+
T Consensus 184 v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~~~~~~~v~q~g~~g 261 (288)
T cd07412 184 APELKAGGVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRLDPDVDVVFAGHTHQAYNCTVPAGNPRLVTQAGSYG 261 (288)
T ss_pred HHHHHHCCCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhcCCCCCEEEeCccCccccccccCcCCEEEEecChhh
Confidence 334444456778899998764322211100001122334444 37999999999998755 23666666554333
No 69
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.03 E-value=3.2e-05 Score=62.96 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=26.6
Q ss_pred CccEEEeCCcccceEEeeCCeEEEEeCCCCCC
Q 024595 177 NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKA 208 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~ 208 (265)
..+++++||.|........++.++..|+....
T Consensus 191 ~p~vii~Gh~h~~~~~~~~~~~~vn~Gsf~~~ 222 (243)
T cd07386 191 VPDILHTGHVHVYGVGVYRGVLLVNSGTWQSQ 222 (243)
T ss_pred CCCEEEECCCCchHhEEECCEEEEECCCCcCC
Confidence 56899999999998887789999988776543
No 70
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=97.99 E-value=2.9e-05 Score=67.72 Aligned_cols=86 Identities=17% Similarity=0.147 Sum_probs=46.8
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee--CCeEEEEeCCCCCCCCCCCCCCCCccc
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS--NGIEFLTSGGGSKAWRGDRNWWSPEEL 221 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~--~~~~~i~~g~~~~~~~~~~~~~~~~~~ 221 (265)
+.+++.|..- ..|+.+.-+.+.|++-+ .++|+.||.|-...... ..-.|.+...|+....+.++ .+
T Consensus 212 FNllvlHQNr---~~h~~tn~lpE~flp~F----~DlviWGHEHEC~i~p~~n~~~~F~i~QPGSsVaTSL~~----gE- 279 (646)
T KOG2310|consen 212 FNLLVLHQNR---SKHRPTNFLPEQFLPDF----LDLVIWGHEHECKIDPQYNAIQGFYILQPGSSVATSLSP----GE- 279 (646)
T ss_pred eeeEEEeecc---cCCCCcccCcHhHhhhh----hhheeeccccccccCcccccccceeeecCCCccccccCc----cc-
Confidence 4688888753 22333323334444433 48999999998765433 22235555555544333332 11
Q ss_pred eeeecCCCeEEEEEeCCeEEEEE
Q 024595 222 KLYYDGQGFMSVKMTRSEAVVLF 244 (265)
Q Consensus 222 ~~~~~~~gy~~~~v~~~~i~~~~ 244 (265)
.......++.|.+.+++.+-
T Consensus 280 ---a~~Khv~lL~Ikg~~~~l~~ 299 (646)
T KOG2310|consen 280 ---AKPKHVGLLRIKGRKFKLEK 299 (646)
T ss_pred ---ccCceEEEEEecCCcccccc
Confidence 12446678888876555443
No 71
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.97 E-value=0.00028 Score=58.62 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=41.4
Q ss_pred HHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-Ccc-EEEeCCcccceEEee-CCeEEEEeCCCC
Q 024595 131 KDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVD-MYVNGHDHCLQHISS-NGIEFLTSGGGS 206 (265)
Q Consensus 131 ~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~-~vl~GH~H~~~~~~~-~~~~~i~~g~~~ 206 (265)
.|+.+.|++.+...+|+++|..+.... ...+..+ .+.++. +++ ++++||+|....... +++..+..|.-+
T Consensus 177 ~~v~~~l~~~~~DvIIvlsH~G~~~d~---~~~~~~~---~la~~~~~id~~Ii~GHsH~~~~~~~~~~~~ivq~G~~g 249 (282)
T cd07407 177 PWFQDAINNEDVDLILVLGHMPVRDDA---EFKVLHD---AIRKIFPDTPIQFLGGHSHVRDFTQYDSSSTGLESGRYL 249 (282)
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCCCCc---cHHHHHH---HHHHhCCCCCEEEEeCCcccccceeccCcEEEEeccchh
Confidence 588777775567789999999764331 1111111 233333 567 799999997644333 566555544433
No 72
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.94 E-value=0.00022 Score=51.87 Aligned_cols=102 Identities=21% Similarity=0.360 Sum_probs=70.4
Q ss_pred CCeEEEEeccc-cccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcc
Q 024595 142 AKWKIVVGHHT-IKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEE 220 (265)
Q Consensus 142 ~~~~iv~~H~P-~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~ 220 (265)
..++|=+.|.. +.+ +++. +.|.-+.++.+|++.+.||+|....+..+|--|+.-|++.+.+...- .+
T Consensus 78 GqfkIG~chGhqViP---~gd~----~sL~~LaRqldvDILl~G~Th~f~Aye~eg~ffvnPGSaTGAfn~~~----t~- 145 (183)
T KOG3325|consen 78 GQFKIGLCHGHQVIP---WGDP----ESLALLARQLDVDILLTGHTHKFEAYEHEGKFFVNPGSATGAFNVSD----TD- 145 (183)
T ss_pred ccEEEEeecCcEeec---CCCH----HHHHHHHHhcCCcEEEeCCceeEEEEEeCCcEEeCCCcccCCCcccc----cC-
Confidence 45667666642 222 2332 33445566679999999999999999999999998887765542111 00
Q ss_pred ceeeecCCCeEEEEEeCCeEEEEEEe-cCCCe-EEEEEccC
Q 024595 221 LKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNI-LHKWSIPK 259 (265)
Q Consensus 221 ~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~-~~~~~i~~ 259 (265)
...+.|+++++.+..+.+..|. .+|++ ++++...|
T Consensus 146 ----~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 146 ----IIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ----CCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 1467999999999988888887 78877 66666554
No 73
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.92 E-value=8.6e-05 Score=66.71 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=25.9
Q ss_pred ccEEEeCCcccceEEeeCCeEEEEeCCCCC
Q 024595 178 VDMYVNGHDHCLQHISSNGIEFLTSGGGSK 207 (265)
Q Consensus 178 v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~ 207 (265)
.+++++||.|.+......++.++++|+...
T Consensus 441 Pdv~~~GH~H~~~~~~~~g~~~IN~gsf~~ 470 (504)
T PRK04036 441 PDIFHTGHVHINGYGKYRGVLLINSGTWQA 470 (504)
T ss_pred CCEEEeCCCCccceEEECCEEEEECCcccc
Confidence 589999999999888889999999887654
No 74
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.91 E-value=6.4e-05 Score=62.49 Aligned_cols=171 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred cCCCEEEecCCccC-CCC--CCCCCC-h--hhhhhcccccC-CCCCCCceEEcCCCcccCCCccccccccccccCCCcee
Q 024595 8 LEIDFVISTGDNFY-EDG--LTGEED-P--AFLDSFTSIYT-APSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC 80 (265)
Q Consensus 8 ~~pd~vv~~GD~~~-~~g--~~~~~~-~--~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~ 80 (265)
.++|+++++||.-- .++ ..+..- + +....|-..++ .....+|.++|-||||..+.. ..+.| +.|.-
T Consensus 29 tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAsnyL-~eLpy------GGwVA 101 (456)
T KOG2863|consen 29 TKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEASNYL-QELPY------GGWVA 101 (456)
T ss_pred CCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHHHHH-Hhccc------Cceec
Confidence 48999999999531 111 001111 1 11223333443 234579999999999975432 22222 33543
Q ss_pred eeeeE------ecCceEEEEEEeCccccccccCCCCCCCCCccccc---hhhhhHHHHHHHHHHHhhcCCCCeEEEEecc
Q 024595 81 SRSFI------LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVY---RRKEYLSDLLKDVDGALKNSKAKWKIVVGHH 151 (265)
Q Consensus 81 ~~~y~------~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~ 151 (265)
|+-|+ +..+++|+-.+-...-...|.. ...+|.... =+..+-..+.+= ..|...+.+-=|+++|.
T Consensus 102 pNIyYlG~agVv~~~gvRIggiSGI~k~~dy~k----gh~E~ppyn~stiRsiYHvR~~dV--~~Lkqlk~piDIfLSHD 175 (456)
T KOG2863|consen 102 PNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRK----GHFEWPPYNNSTIRSIYHVRISDV--AKLKQLKHPIDIFLSHD 175 (456)
T ss_pred cceEEeeecceEEECCEEEeeccchhhhhhccc----CCCCCCCccchhhhhhhhhhhhhh--HHHHhhcCcceEEeecC
Confidence 43333 4457888877755432211110 011110000 011111122221 12223344455888888
Q ss_pred ccccCCCCCChHHHH-----------------HHHHHHHHhCCccEEEeCCcccceE
Q 024595 152 TIKSAGHHGVTKELL-----------------LRLLPILEENNVDMYVNGHDHCLQH 191 (265)
Q Consensus 152 P~~~~~~~~~~~~~~-----------------~~l~~~~~~~~v~~vl~GH~H~~~~ 191 (265)
=+.+...+|+..++. ..+..+|++.+..++++.|.|+-..
T Consensus 176 WP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFa 232 (456)
T KOG2863|consen 176 WPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAHLHVKFA 232 (456)
T ss_pred CCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhhHhhHHh
Confidence 777766666654321 2346788888999999999998654
No 75
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.88 E-value=7.3e-06 Score=63.07 Aligned_cols=55 Identities=16% Similarity=0.018 Sum_probs=33.5
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~ 61 (265)
+.+++.+||.||++||+++..... . ........ .......++|+++++||||...
T Consensus 35 ~~~~~~~~d~lii~GDl~~~~~~~--~-~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 35 RLIEEYGPERLIILGDLKHSFGGL--S-RQEFEEVA-FLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHhcCCCEEEEeCccccccccc--C-HHHHHHHH-HHHhccCCCeEEEEcccCccch
Confidence 345668999999999999533211 1 11111111 1112235789999999999743
No 76
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.87 E-value=0.0011 Score=55.26 Aligned_cols=55 Identities=24% Similarity=0.279 Sum_probs=31.8
Q ss_pred hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE
Q 024595 137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH 191 (265)
Q Consensus 137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~ 191 (265)
|++.....+|+++|.........+........+.+.+...++++++.||+|....
T Consensus 169 lk~~~~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 169 LKQEKPDIVIAATHMGHYDNGEHGSNAPGDVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred HHHcCCCEEEEEecccccCCccccccCchHHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 4444567889999997643322111101112233333225899999999999764
No 77
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.80 E-value=9.9e-05 Score=58.58 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=24.8
Q ss_pred CccEEEeCCcccceEEeeCCeEEEEeCCCCC
Q 024595 177 NVDMYVNGHDHCLQHISSNGIEFLTSGGGSK 207 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~ 207 (265)
+.+++++||+|.......++...+.+|+.+.
T Consensus 168 ~~~~iV~GHTh~~~~~~~~~~i~ID~Gsv~g 198 (207)
T cd07424 168 GVDAVVHGHTPVKRPLRLGNVLYIDTGAVFD 198 (207)
T ss_pred CCCEEEECCCCCCcceEECCEEEEECCCCCC
Confidence 3578999999998876677888888887653
No 78
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.68 E-value=0.0006 Score=67.55 Aligned_cols=62 Identities=19% Similarity=0.197 Sum_probs=39.1
Q ss_pred CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595 140 SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206 (265)
Q Consensus 140 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~ 206 (265)
.+...+|+++|.........+ ......+.++. +|++++.||+|.......+++..+.+|+.+
T Consensus 837 ~~~D~VV~LsH~G~~~d~~~~-----~~~~~~lA~~v~gIDvIigGHsH~~~~~~v~~~~ivqag~~g 899 (1163)
T PRK09419 837 EKVDAIIALTHLGSNQDRTTG-----EITGLELAKKVKGVDAIISAHTHTLVDKVVNGTPVVQAYKYG 899 (1163)
T ss_pred cCCCEEEEEecCCcccccccc-----ccHHHHHHHhCCCCCEEEeCCCCccccccCCCEEEEeCChhH
Confidence 456788999999765332211 11234455543 799999999998765444666666555443
No 79
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.66 E-value=0.003 Score=51.76 Aligned_cols=62 Identities=16% Similarity=0.107 Sum_probs=42.3
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe---eCCeEEEEeCCCCCCCCCCC
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---SNGIEFLTSGGGSKAWRGDR 213 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---~~~~~~i~~g~~~~~~~~~~ 213 (265)
...+||.+|-- .+. .+..+..+-+.+|++|+.-|+|..-... ..|+.|++--+..+++.+.+
T Consensus 144 ~d~IIVd~Hae--------ats--EK~a~~~~ldg~vsaVvGtHtHV~TaD~~il~~gtayitD~Gm~G~~~svi 208 (266)
T TIGR00282 144 CDLIFVDFHAE--------TTS--EKNAFGMAFDGYVTAVVGTHTHVPTADLRILPKGTAYITDVGMTGPFGSVI 208 (266)
T ss_pred CCEEEEEeCCC--------CHH--HHHHHHHHhCCCccEEEeCCCCCCCCcceeCCCCCEEEecCCcccCcccCc
Confidence 45788889982 222 2444555666799999999999876443 48999997666665554433
No 80
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.65 E-value=0.002 Score=58.90 Aligned_cols=55 Identities=25% Similarity=0.273 Sum_probs=32.0
Q ss_pred HHHHhhc-CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC---CccEEEeCCcccce
Q 024595 133 VDGALKN-SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN---NVDMYVNGHDHCLQ 190 (265)
Q Consensus 133 l~~~l~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~---~v~~vl~GH~H~~~ 190 (265)
+-++|++ .+...+|+++|.............. .-..+.++. +|++++.||+|...
T Consensus 200 ~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~~~~---~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 200 VIPELKQTEKPDVIIALTHMGHYDDGEHGSNAP---GDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred HHHHHHhccCCCEEEEEeccccccCCccCCCCc---cHHHHHHhCCccCceEEEeCCCCccc
Confidence 3344543 3567899999987643322111101 012344443 79999999999865
No 81
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=97.65 E-value=0.00015 Score=58.55 Aligned_cols=213 Identities=17% Similarity=0.088 Sum_probs=118.6
Q ss_pred CCEEEecCCccCCCCCCCC--CChhhhhhcccccC----CCCCCCceEEcCCCcccCCCc-ccccccc-------ccc--
Q 024595 10 IDFVISTGDNFYEDGLTGE--EDPAFLDSFTSIYT----APSLQKQWYNVLGNHDYRGDV-EAQLSPV-------LTR-- 73 (265)
Q Consensus 10 pd~vv~~GD~~~~~g~~~~--~~~~~~~~~~~~~~----~~~l~~p~~~i~GNHD~~~~~-~~~~~~~-------~~~-- 73 (265)
|=-+|..||++.+.|-.+- .+..-.++|+..+. ...+..|+|+-.||||...+. .-.++.+ ...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 4457788899943332111 01111122222222 112358999999999985431 1111110 000
Q ss_pred -cCCCceee----------eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc--C
Q 024595 74 -KDSRWLCS----------RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN--S 140 (265)
Q Consensus 74 -~~~~~~~~----------~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~--~ 140 (265)
.+..|..| ..|+++.+.+..+-.....-.. ++ .. ..-+-||+..|.. +
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~----~~---ga------------~sslpwlk~dl~~~aa 267 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDA----EP---GA------------NSSLPWLKVDLIYSAA 267 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeecccc----CC---Cc------------cccCcceeccceeecc
Confidence 01122211 3477777777776655443100 00 00 1127899988876 4
Q ss_pred CCCeEEEEeccccccCC--CC----------C------ChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-CCeEEEE
Q 024595 141 KAKWKIVVGHHTIKSAG--HH----------G------VTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-NGIEFLT 201 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~--~~----------~------~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-~~~~~i~ 201 (265)
+.++++++.|.-..... .. | .....+..++..++.|+|...+.||-|......+ .++...
T Consensus 268 dgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~mayrr~~ld~f- 346 (392)
T COG5555 268 DGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAYRRYDLDAF- 346 (392)
T ss_pred CCCceeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceeeeecCcccc-
Confidence 78899999997543211 00 1 0123356788888899999999999998754332 333221
Q ss_pred eCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe---cCCCeEEEEEccCCC
Q 024595 202 SGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD---VHGNILHKWSIPKEP 261 (265)
Q Consensus 202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~---~~g~~~~~~~i~~~~ 261 (265)
..+. .-..||.+..|.+.-|.+-... ..|.++.+-.+.|++
T Consensus 347 ----------------kpka---a~~Ggfav~rvt~~~mDva~geae~~~G~v~Ft~afsk~w 390 (392)
T COG5555 347 ----------------KPKA---AVRGGFAVGRVTNPWMDVANGEAEHPRGSVCFTTAFSKKW 390 (392)
T ss_pred ----------------Cccc---hhhcceeEEEecCchhhhhcccccCCCccEEEehhhhhcc
Confidence 0000 1246889999998877776654 668888888877765
No 82
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.62 E-value=0.0011 Score=55.10 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=27.0
Q ss_pred hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
|++.+...+|+++|.... .+ ..+.++ .+|+++++||+|...
T Consensus 178 lr~~~~D~II~l~H~G~~--------~d-----~~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 178 LKAQGVNKIIALSHSGYE--------VD-----KEIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHhcCCCEEEEEeccCch--------hH-----HHHHHcCCCCcEEEeCCcCccc
Confidence 333356778899998532 11 123333 479999999999975
No 83
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.49 E-value=0.0073 Score=49.36 Aligned_cols=61 Identities=23% Similarity=0.229 Sum_probs=38.2
Q ss_pred CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe---eCCeEEEEeCCCCCCCCC
Q 024595 141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---SNGIEFLTSGGGSKAWRG 211 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---~~~~~~i~~g~~~~~~~~ 211 (265)
+...+|+.+|.-. ..+ ...+...+ ..+|++|+.||+|..-... .+++.|++--+..+.+.+
T Consensus 140 ~~D~IIV~~H~g~--------tsE-k~ala~~l-dg~VdvIvGtHTHv~t~d~~il~~gTa~itd~Gm~G~~~s 203 (255)
T cd07382 140 EADIIFVDFHAEA--------TSE-KIALGWYL-DGRVSAVVGTHTHVQTADERILPGGTAYITDVGMTGPYDS 203 (255)
T ss_pred CCCEEEEEECCCC--------CHH-HHHHHHhC-CCCceEEEeCCCCccCCccEEeeCCeEEEecCccccCCCc
Confidence 4567888899832 111 11222222 2369999999999985443 488889876665555443
No 84
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.37 E-value=8.5e-05 Score=59.57 Aligned_cols=50 Identities=24% Similarity=0.135 Sum_probs=31.4
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
++++.+||.||++||+++..... ....++.+.++ .+..+++.|+||||..
T Consensus 53 li~~~~~d~vIi~GDl~h~~~~~-~~~~~~~~~l~------~~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 53 IADKYGIEALIINGDLKHEFKKG-LEWRFIREFIE------VTFRDLILIRGNHDAL 102 (225)
T ss_pred HHhhcCCCEEEEcCccccccCCh-HHHHHHHHHHH------hcCCcEEEECCCCCCc
Confidence 45667899999999999643311 11111222221 2456999999999953
No 85
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.33 E-value=0.0044 Score=56.26 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=33.3
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-----eCCeEEEEeCCCC
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-----SNGIEFLTSGGGS 206 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-----~~~~~~i~~g~~~ 206 (265)
...+|+++|.+...........+. ...... ..+++++.||+|...... .+++..+..|..|
T Consensus 204 vD~iI~LsH~G~~~d~~~~~~~~~---~~~~~~-~~iD~i~~GH~H~~~~~~~~~~~~~~t~ivqag~~g 269 (517)
T COG0737 204 VDVIIALSHLGIEDDLELASEVPG---DVDVAV-PGIDLIIGGHSHTVFPGGDKPGTVNGTPIVQAGEYG 269 (517)
T ss_pred CCEEEEEeccCcCccccccccccc---cccccc-cCcceEeccCCcccccCCcccCccCCEEEEccChhh
Confidence 567899999987654332111000 000000 349999999999653222 2556665544443
No 86
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.29 E-value=0.0037 Score=62.12 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=34.1
Q ss_pred HHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceE
Q 024595 135 GALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQH 191 (265)
Q Consensus 135 ~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~ 191 (265)
.+|++.....+|+++|........... ..+....+.++ .+|++++.||+|....
T Consensus 228 ~~lk~~gaDvII~l~H~G~~~~~~~~~---~en~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 228 PEMKKGGADVIVALAHSGIESEYQSSG---AEDSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred HHHHhcCCCEEEEEeccCcCCCCCCCC---cchHHHHHHHhCCCCcEEEeCCCccccc
Confidence 345444677899999997654321111 12233445544 4799999999999764
No 87
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.26 E-value=0.00094 Score=49.92 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=28.7
Q ss_pred cccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcc
Q 024595 6 EKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHD 58 (265)
Q Consensus 6 ~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD 58 (265)
++.+.|++|++||..-.. . .+.++.+-+. ....+.+|+|++-|||+
T Consensus 23 k~gpFd~~ic~Gdff~~~---~-~~~~~~~y~~---g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 23 KKGPFDALLCVGDFFGDD---E-DDEELEAYKD---GSKKVPIPTYFLGGNNP 68 (150)
T ss_pred ccCCeeEEEEecCccCCc---c-chhhHHHHhc---CCccCCCCEEEECCCCC
Confidence 346899999999987211 1 1122322211 12346799999999997
No 88
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.26 E-value=0.009 Score=56.40 Aligned_cols=67 Identities=21% Similarity=0.219 Sum_probs=41.0
Q ss_pred HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595 136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206 (265)
Q Consensus 136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~ 206 (265)
+|++.....+|+++|.-+....... ........ +++ -+|+++++||+|.......+++..+..|..|
T Consensus 239 ~Lr~~GaDvIIaLsH~G~~~d~~~~---~~ena~~~-l~~v~gID~IlgGHsH~~~~~~ingv~vvqaG~~G 306 (780)
T PRK09418 239 KMKAEGADVIVALAHSGVDKSGYNV---GMENASYY-LTEVPGVDAVLMGHSHTEVKDVFNGVPVVMPGVFG 306 (780)
T ss_pred HHHhcCCCEEEEEeccCcccccccc---cchhhhHH-HhcCCCCCEEEECCCCCcccccCCCEEEEEcChhh
Confidence 3544467789999999764332110 11111111 344 3799999999999876555777777665544
No 89
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=97.18 E-value=0.0018 Score=40.65 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=30.6
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEe-CCeEEEEEEe-cCCCeEEEE
Q 024595 196 GIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMT-RSEAVVLFYD-VHGNILHKW 255 (265)
Q Consensus 196 ~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~-~~~i~~~~~~-~~g~~~~~~ 255 (265)
++.+|++|++|........+ .++...+....+||.++++. ...|.++++. .+|+++|++
T Consensus 2 apVhiv~G~aG~~l~~~~~~-~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 2 APVHIVVGAAGNGLDPFPYP-PPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp S-EEEEE--S-T----B-SS---TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCEEEEECcCCCCcccccCC-CCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 46789999998854332221 23334455678999999965 6799999998 559998874
No 90
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.08 E-value=0.011 Score=55.98 Aligned_cols=52 Identities=23% Similarity=0.212 Sum_probs=30.7
Q ss_pred HHhhcCCCCeEEEEeccccccCCC-CCChHHHHHHHHHHHHhCCccEEEeCCcccce
Q 024595 135 GALKNSKAKWKIVVGHHTIKSAGH-HGVTKELLLRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 135 ~~l~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
.+|++.....+|+++|.-+..... .+. .+.-..+.+-.+||+++.||+|...
T Consensus 303 ~~Lr~~GaDvIIaLsH~G~~~d~~~~~~----En~~~~LA~v~GIDaIvgGHsH~~~ 355 (814)
T PRK11907 303 PTMRAAGADIVLVLSHSGIGDDQYEVGE----ENVGYQIASLSGVDAVVTGHSHAEF 355 (814)
T ss_pred HHHHhcCCCEEEEEeCCCcccccccccc----cchhhHHhcCCCCCEEEECCCCCcc
Confidence 334444577889999986543211 111 1111223322489999999999964
No 91
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.99 E-value=0.025 Score=49.49 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=25.4
Q ss_pred CccEEEeCCcccceEEeeCCeEEEEeCCCCC
Q 024595 177 NVDMYVNGHDHCLQHISSNGIEFLTSGGGSK 207 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~ 207 (265)
-.+++.+||.|.+......++..+.+++...
T Consensus 418 vPDv~~~Ghvh~~g~~~y~gv~~vns~T~q~ 448 (481)
T COG1311 418 VPDVFHTGHVHKFGTGVYEGVNLVNSGTWQE 448 (481)
T ss_pred CCcEEEEccccccceeEEeccceEEeeeecc
Confidence 4699999999999988887888887766543
No 92
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.97 E-value=0.0012 Score=48.61 Aligned_cols=39 Identities=21% Similarity=0.248 Sum_probs=26.3
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCccc
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHC 188 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~ 188 (265)
..|+++|.|-.+....+. ..++.- ...++.+.+.||.|.
T Consensus 109 ~~~~LsHyP~~~~~~~~~----~~r~~y--~~~~~~llIHGH~H~ 147 (186)
T COG4186 109 EDVYLSHYPRPGQDHPGM----ESRFDY--LRLRVPLLIHGHLHS 147 (186)
T ss_pred eEEEEEeCCCCCCCCcch----hhhHHH--HhccCCeEEeccccc
Confidence 468999999766555442 122222 234688999999999
No 93
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=96.96 E-value=0.0096 Score=54.40 Aligned_cols=43 Identities=30% Similarity=0.472 Sum_probs=28.0
Q ss_pred HHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 135 GALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 135 ~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
+.|++.....+|+++|.-.. .. ..+.++ .+|+++|+||+|...
T Consensus 176 ~~Lk~~g~D~II~lsH~g~~--------~d-----~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 176 NALKQQGINKIILLSHAGFE--------KN-----CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred HHHHhCCCCEEEEEecCCcH--------HH-----HHHHhcCCCCCEEEeCCCCccc
Confidence 34444456778899998421 11 123444 379999999999965
No 94
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.95 E-value=0.00052 Score=54.64 Aligned_cols=55 Identities=22% Similarity=0.170 Sum_probs=36.4
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~ 61 (265)
+.++..+|+-+|++||+.++.+............|...... .-|++|.||||-+.
T Consensus 57 ~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~----~evi~i~GNHD~~i 111 (235)
T COG1407 57 RIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE----REVIIIRGNHDNGI 111 (235)
T ss_pred HHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc----CcEEEEeccCCCcc
Confidence 45778899999999999976654332323333344443321 14999999999643
No 95
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.93 E-value=0.019 Score=53.25 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=30.6
Q ss_pred HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
+|++.....+|+++|..+......... .+. ...+.+ .+|+++++||+|...
T Consensus 190 ~Lr~~gaDvII~LsH~G~~~d~~~~~~---en~-~~~l~~v~gID~Il~GHsH~~~ 241 (626)
T TIGR01390 190 EMKAKGADIIVALAHSGISADPYQPGA---ENS-AYYLTKVPGIDAVLFGHSHAVF 241 (626)
T ss_pred HHHHcCCCEEEEEeccCcCCCcccccc---chH-HHHHhcCCCCCEEEcCCCCccC
Confidence 344445778999999976533211010 111 112344 489999999999975
No 96
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=96.85 E-value=0.027 Score=47.63 Aligned_cols=45 Identities=20% Similarity=0.198 Sum_probs=28.4
Q ss_pred HHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 134 DGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 134 ~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
-+.|++.....+|+++|.--+ ..+ ..+.++ .+|+++|.||+|...
T Consensus 200 v~~Lr~~gvD~II~LsH~g~~-------~~d-----~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 200 IDALTAQGINKIILLSHLQQI-------SIE-----QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred HHHHHHCCCCEEEEEeccccc-------chH-----HHHHhcCCCCCEEEeCCCCccC
Confidence 334444456778899998311 111 234444 379999999999875
No 97
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.84 E-value=0.0013 Score=50.40 Aligned_cols=42 Identities=26% Similarity=0.232 Sum_probs=27.5
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCC
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~ 61 (265)
++|.|+++||++. .+.. ....+.+ ..++.|+++|+||||...
T Consensus 42 ~~d~vi~~GDl~~-~~~~----~~~~~~l------~~~~~~~~~v~GNHD~~~ 83 (168)
T cd07390 42 PDDTVYHLGDFSF-GGKA----GTELELL------SRLNGRKHLIKGNHDSSL 83 (168)
T ss_pred CCCEEEEeCCCCC-CCCh----HHHHHHH------HhCCCCeEEEeCCCCchh
Confidence 6899999999994 2211 1111111 134579999999999643
No 98
>PHA02239 putative protein phosphatase
Probab=96.67 E-value=0.00069 Score=54.71 Aligned_cols=43 Identities=21% Similarity=0.313 Sum_probs=26.3
Q ss_pred CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
.|.++++||++ +.|..+ .+....+..+ .....++++++||||.
T Consensus 30 ~d~li~lGD~i-DrG~~s---~~v~~~l~~~---~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 30 EETIVFLGDYV-DRGKRS---KDVVNYIFDL---MSNDDNVVTLLGNHDD 72 (235)
T ss_pred CCEEEEecCcC-CCCCCh---HHHHHHHHHH---hhcCCCeEEEECCcHH
Confidence 59999999999 455221 2222222111 1123579999999996
No 99
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.39 E-value=0.0019 Score=53.39 Aligned_cols=43 Identities=30% Similarity=0.314 Sum_probs=27.9
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
.++|.++++||++ +.|.. ..+..+. +. .++.++++|.||||..
T Consensus 27 ~~~D~li~lGDlV-drGp~---s~~vl~~---l~---~l~~~~~~VlGNHD~~ 69 (275)
T PRK00166 27 PAKDTLWLVGDLV-NRGPD---SLEVLRF---VK---SLGDSAVTVLGNHDLH 69 (275)
T ss_pred CCCCEEEEeCCcc-CCCcC---HHHHHHH---HH---hcCCCeEEEecChhHH
Confidence 3689999999999 45521 1222222 21 2355788999999973
No 100
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=96.39 E-value=0.029 Score=50.26 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccE-EEeCCcccceEEe
Q 024595 128 DLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDM-YVNGHDHCLQHIS 193 (265)
Q Consensus 128 ~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~-vl~GH~H~~~~~~ 193 (265)
.|.+|-...++..+-..++++.|.|+.... +..-.+..+.+.+ ++.+ |+.||+|......
T Consensus 212 ~~~~~~~~m~~~~~idlii~lgH~~~~~~~------e~~~~~~~ir~~~p~t~IqviGGHshird~a~ 273 (602)
T KOG4419|consen 212 TQSEWEQDMVNTTDIDLIIALGHSPVRDDD------EWKSLHAEIRKVHPNTPIQVIGGHSHIRDFAV 273 (602)
T ss_pred hccchHHHHhhccCccEEEEecccccccch------hhhhHHHHHhhhCCCCceEEECchhhhhhhhh
Confidence 567777777777777778888999875321 1112344455554 5677 9999999876543
No 101
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.23 E-value=0.0029 Score=51.78 Aligned_cols=43 Identities=30% Similarity=0.281 Sum_probs=27.5
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
.+.|.++++||++ +.|.. ..+.. ..+. .++..++.|+||||..
T Consensus 25 ~~~D~Li~lGDlV-dRGp~---s~evl---~~l~---~l~~~v~~VlGNHD~~ 67 (257)
T cd07422 25 PAKDRLWLVGDLV-NRGPD---SLETL---RFVK---SLGDSAKTVLGNHDLH 67 (257)
T ss_pred CCCCEEEEecCcC-CCCcC---HHHHH---HHHH---hcCCCeEEEcCCchHH
Confidence 3579999999999 45522 12222 2221 2335788999999974
No 102
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=95.92 E-value=0.0041 Score=49.34 Aligned_cols=25 Identities=28% Similarity=0.219 Sum_probs=20.5
Q ss_pred HHHHHHHhCCccEEEeCCcccceEE
Q 024595 168 RLLPILEENNVDMYVNGHDHCLQHI 192 (265)
Q Consensus 168 ~l~~~~~~~~v~~vl~GH~H~~~~~ 192 (265)
.+..+++..+.+++++||+|.....
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~~~ 182 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEGGI 182 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeecCc
Confidence 4667788888999999999987644
No 103
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.79 E-value=0.18 Score=47.03 Aligned_cols=51 Identities=20% Similarity=0.222 Sum_probs=30.6
Q ss_pred HHhhcCCCCeEEEEeccccccCCC-CCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 135 GALKNSKAKWKIVVGHHTIKSAGH-HGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 135 ~~l~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
.+|++.....+|+++|..+..... ... .+.... +.+ .+|++++.||+|...
T Consensus 212 ~~Lk~~gaDvII~LsH~G~~~d~~~~~a----en~~~~-l~~v~gID~Il~GHsH~~~ 264 (649)
T PRK09420 212 PEMKEKGADIVVAIPHSGISADPYKAMA----ENSVYY-LSEVPGIDAIMFGHSHAVF 264 (649)
T ss_pred HHHHHcCCCEEEEEecCCcCCCCccccc----cchhHH-HhcCCCCCEEEeCCCCccC
Confidence 335544677899999997643211 111 111112 333 479999999999865
No 104
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.76 E-value=0.0059 Score=48.91 Aligned_cols=46 Identities=22% Similarity=0.193 Sum_probs=28.0
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
.++|.+|++||++. .|..+ .+.......+. ....+++++.||||..
T Consensus 23 ~~~d~li~lGD~vd-rg~~~---~~~l~~l~~~~---~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 23 PPNDKLIFLGDYVD-RGPDS---VEVIDLLLALK---ILPDNVILLRGNHEDM 68 (225)
T ss_pred CCCCEEEEECCEeC-CCCCc---HHHHHHHHHhc---CCCCcEEEEccCchhh
Confidence 47899999999993 44211 22222111111 1145899999999974
No 105
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.73 E-value=0.17 Score=41.43 Aligned_cols=55 Identities=9% Similarity=0.049 Sum_probs=31.2
Q ss_pred CCceEEcCCCcccCCCcc--cccc-ccccccC--CCc-eeeeeeEecCceEEEEEEeCccc
Q 024595 47 QKQWYNVLGNHDYRGDVE--AQLS-PVLTRKD--SRW-LCSRSFILDAEIAEFVFVDTTPF 101 (265)
Q Consensus 47 ~~p~~~i~GNHD~~~~~~--~~~~-~~~~~~~--~~~-~~~~~y~~~~~~~~~i~lds~~~ 101 (265)
.+|+.++|||||-.+... ..+. .+++... ..+ ...+.|.+..++++|++...+..
T Consensus 94 ~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni 154 (257)
T cd07387 94 SVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNV 154 (257)
T ss_pred CCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCH
Confidence 689999999999754311 0010 0111110 111 12355677778899988877654
No 106
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=95.53 E-value=0.0095 Score=47.79 Aligned_cols=43 Identities=23% Similarity=0.316 Sum_probs=26.2
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
..|.+|++||+| +.|.. ..+..+.+..+. ..-+++.+.||||.
T Consensus 33 ~~d~lvflGD~I-DRGp~---S~~vl~~l~~l~----~~~~~~~l~GNHE~ 75 (222)
T cd07413 33 PERQVVFLGDLI-DRGPE---IRELLEIVKSMV----DAGHALAVMGNHEF 75 (222)
T ss_pred CCCEEEEeCccc-CCCCC---HHHHHHHHHHhh----cCCCEEEEEccCcH
Confidence 468999999999 45522 222222222211 12368899999995
No 107
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=95.30 E-value=0.27 Score=39.80 Aligned_cols=169 Identities=17% Similarity=0.197 Sum_probs=68.0
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCC-cccccc---cccc-ccCCC
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD-VEAQLS---PVLT-RKDSR 77 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~-~~~~~~---~~~~-~~~~~ 77 (265)
++-++.++||||..|.+. ..|.. .. +.. ++.++ .+++-+ .+.|||=|... ....++ ..++ .+.+.
T Consensus 21 ~L~~~~~~DfVIaNgENa-a~G~G-it-~~~---~~~L~---~~GvDv-iT~GNH~wdkkei~~~i~~~~~ilRPaN~p~ 90 (253)
T PF13277_consen 21 ELKEEYGIDFVIANGENA-AGGFG-IT-PKI---AEELF---KAGVDV-ITMGNHIWDKKEIFDFIDKEPRILRPANYPP 90 (253)
T ss_dssp HHGG--G-SEEEEE-TTT-TTTSS----HHH---HHHHH---HHT-SE-EE--TTTTSSTTHHHHHHH-SSEE--TTS-T
T ss_pred HHHhhcCCCEEEECCccc-CCCCC-CC-HHH---HHHHH---hcCCCE-EecCcccccCcHHHHHHhcCCCcEECCCCCC
Confidence 455678999999999988 34321 11 111 22222 123333 56799998653 111110 0010 01000
Q ss_pred ceee---eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccc
Q 024595 78 WLCS---RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIK 154 (265)
Q Consensus 78 ~~~~---~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~ 154 (265)
-..+ ..|..+...+.++.|=.+.++.. .+ +|. .-++++-+.+ +.+...+||=+|.
T Consensus 91 ~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~---------~~----~PF-----~~~d~~l~~l-~~~~~~iiVDFHA--- 148 (253)
T PF13277_consen 91 GTPGRGYRIFEKNGKKVAVINLMGRVFMPP---------ID----CPF-----RAADRLLEEL-KEETDIIIVDFHA--- 148 (253)
T ss_dssp T-SSBSEEEEEETTEEEEEEEEE--TTS------------S-----HH-----HHHHHHHHH------SEEEEEEE----
T ss_pred CCCcCcEEEEEECCEEEEEEECcccccCCC---------CC----ChH-----HHHHHHHHhc-cccCCEEEEEeec---
Confidence 0000 12333334455555555544321 11 111 1133344444 2345566666887
Q ss_pred cCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEE---eeCCeEEEEeCCCCCCCC
Q 024595 155 SAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHI---SSNGIEFLTSGGGSKAWR 210 (265)
Q Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~---~~~~~~~i~~g~~~~~~~ 210 (265)
..-. ++.-+...-+.+|.+|+.=|+|..-.. ...|+.|++--+..++..
T Consensus 149 ------EaTS-EK~A~g~~lDGrvsaV~GTHTHVqTaDerILp~GTaYiTDvGMtG~~d 200 (253)
T PF13277_consen 149 ------EATS-EKQAMGWYLDGRVSAVVGTHTHVQTADERILPGGTAYITDVGMTGPYD 200 (253)
T ss_dssp ------S-HH-HHHHHHHHHBTTBSEEEEESSSS-BS--EE-TTS-EEES---EBEESS
T ss_pred ------CcHH-HHHHHHHHhCCcEEEEEeCCCCccCchhhccCCCCEEEecCccccCcc
Confidence 1112 222333444578999999999987544 347999996554444443
No 108
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=94.82 E-value=0.015 Score=46.46 Aligned_cols=29 Identities=14% Similarity=0.368 Sum_probs=22.0
Q ss_pred CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595 177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG 205 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~ 205 (265)
+.+.|++||+|.......++...|-+|+.
T Consensus 179 ~~~~vv~GHT~~~~~~~~~~~i~IDtGav 207 (218)
T PRK11439 179 GADHFWFGHTPLRHRVDIGNLHYIDTGAV 207 (218)
T ss_pred CCCEEEECCccCCCccccCCEEEEECCCC
Confidence 45689999999987665577777777764
No 109
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=94.72 E-value=0.018 Score=46.07 Aligned_cols=29 Identities=14% Similarity=0.222 Sum_probs=22.9
Q ss_pred CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595 177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG 205 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~ 205 (265)
+.++|++||+|.......++..++.+|+.
T Consensus 179 ~~~~vv~GHTh~~~~~~~~~~i~IDtGs~ 207 (218)
T PRK09968 179 GADYFIFGHMMFDNIQTFANQIYIDTGSP 207 (218)
T ss_pred CCCEEEECCCCcCcceeECCEEEEECCCC
Confidence 56899999999987766677777777754
No 110
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=94.55 E-value=0.023 Score=47.07 Aligned_cols=46 Identities=24% Similarity=0.353 Sum_probs=25.3
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
..+.+|++||++ +.|.. ..+..+.+..... ......++++.||||.
T Consensus 34 ~~~~iVfLGDyV-DRGPd---S~eVld~L~~l~~-~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 34 ASALVIFLGDYC-DRGPE---TRKVIDFLISLPE-KHPKQRHVFLCGNHDF 79 (304)
T ss_pred CCcEEEEeCCcC-CCCCC---HHHHHHHHHHhhh-cccccceEEEecCChH
Confidence 467899999999 45521 1222222221100 0011257899999994
No 111
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=94.54 E-value=0.019 Score=46.79 Aligned_cols=42 Identities=21% Similarity=0.192 Sum_probs=25.6
Q ss_pred CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
-|.+|++||++ +.|..+ .+..+....+ ....+++++.||||.
T Consensus 37 ~d~li~lGDli-DRGp~S---~~vl~~~~~~----~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 37 QRKLAFVGDLT-DRGPHS---LRMIEIVWEL----VEKKAAYYVPGNHCN 78 (245)
T ss_pred CCEEEEECccc-CCCcCh---HHHHHHHHHH----hhCCCEEEEeCccHH
Confidence 47999999999 455222 2222221111 123478999999994
No 112
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=94.46 E-value=0.021 Score=47.11 Aligned_cols=42 Identities=33% Similarity=0.288 Sum_probs=25.7
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
...|-++++||++ ..|.. ..+..+.+. +++..++.|.||||.
T Consensus 27 ~~~D~l~~lGDlV-dRGP~---slevL~~l~------~l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 27 PGQDTLWLTGDLV-ARGPG---SLEVLRYVK------SLGDAVRLVLGNHDL 68 (279)
T ss_pred CCCCEEEEeCCcc-CCCCC---HHHHHHHHH------hcCCCeEEEEChhHH
Confidence 3569999999999 44522 122222222 233346689999996
No 113
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=94.38 E-value=0.023 Score=45.94 Aligned_cols=29 Identities=17% Similarity=0.075 Sum_probs=22.0
Q ss_pred CccEEEeCCcccceEEeeCCeEEEEeCCC
Q 024595 177 NVDMYVNGHDHCLQHISSNGIEFLTSGGG 205 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~~~~~i~~g~~ 205 (265)
+.+++++||+|.......++...|-+|+.
T Consensus 181 ~~~~vv~GHt~~~~~~~~~~~i~IDtGav 209 (234)
T cd07423 181 GDALVVYGHTPVPEPRWLNNTINIDTGCV 209 (234)
T ss_pred CCeEEEECCCCCccceEeCCEEEEECCCC
Confidence 45789999999987655567777777764
No 114
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=93.73 E-value=1.7 Score=35.45 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=38.6
Q ss_pred HHHHHHHhhc--CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 130 LKDVDGALKN--SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 130 ~~wl~~~l~~--~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
.+.+.+.+++ .....+||++|--.. ......+....+...+.+.++++|+.+|.|..+-...
T Consensus 170 ~~~i~~~i~~~r~~~D~vIv~~HwG~e---~~~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E~ 233 (250)
T PF09587_consen 170 IERIKEDIREARKKADVVIVSLHWGIE---YENYPTPEQRELARALIDAGADIIIGHHPHVIQPVEI 233 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeccCCC---CCCCCCHHHHHHHHHHHHcCCCEEEeCCCCcccceEE
Confidence 3445555444 245688888997321 1111122334555566668999999999999987655
No 115
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=93.27 E-value=3.7 Score=33.15 Aligned_cols=74 Identities=18% Similarity=0.137 Sum_probs=42.7
Q ss_pred HHHHHHHhhcC--CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CCeEEEEeCC
Q 024595 130 LKDVDGALKNS--KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NGIEFLTSGG 204 (265)
Q Consensus 130 ~~wl~~~l~~~--~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~~~~i~~g~ 204 (265)
+.-+++.+... +.+.+||-+|.--. ..... +...-+.++.+|+.=|+|..-...+ .|+.|++--+
T Consensus 129 F~~~d~l~~~~~~~~~~iiVDFHAEtT---------SEK~a-~g~yldGrvsavvGTHTHV~TaD~rIL~~GTayiTDvG 198 (266)
T COG1692 129 FKAADKLLDEIKLGTDLIIVDFHAETT---------SEKNA-FGWYLDGRVSAVVGTHTHVPTADERILPKGTAYITDVG 198 (266)
T ss_pred HHHHHHHHHhCccCCceEEEEccccch---------hhhhh-hheEEcCeEEEEEeccCccccccceecCCCcEEEecCc
Confidence 44455555553 33466777887211 11111 1222245789999999998765443 7899997666
Q ss_pred CCCCCCCCC
Q 024595 205 GSKAWRGDR 213 (265)
Q Consensus 205 ~~~~~~~~~ 213 (265)
..+++.+.+
T Consensus 199 MtG~~dSvi 207 (266)
T COG1692 199 MTGPYDSVI 207 (266)
T ss_pred ccccccccc
Confidence 655554443
No 116
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=92.41 E-value=1.1 Score=36.21 Aligned_cols=51 Identities=27% Similarity=0.233 Sum_probs=32.2
Q ss_pred CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
+...+|+++|--...... .. .....+..-+.+.++++|+.||.|..+....
T Consensus 172 ~~D~vIv~~H~G~e~~~~--p~-~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e~ 222 (239)
T smart00854 172 KADVVIVSLHWGVEYQYE--PT-DEQRELAHALIDAGADVVIGHHPHVLQPIEI 222 (239)
T ss_pred cCCEEEEEecCccccCCC--CC-HHHHHHHHHHHHcCCCEEEcCCCCcCCceEE
Confidence 467889999985432211 11 1223344445457899999999999875544
No 117
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=92.37 E-value=1.2 Score=35.98 Aligned_cols=50 Identities=24% Similarity=0.203 Sum_probs=32.0
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
...+|+++|--..... ........+...+...++++|+.||.|..+....
T Consensus 175 ~D~vIv~~H~G~e~~~---~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E~ 224 (239)
T cd07381 175 ADIVIVSLHWGVEYSY---YPTPEQRELARALIDAGADLVIGHHPHVLQGIEI 224 (239)
T ss_pred CCEEEEEecCcccCCC---CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeEE
Confidence 6788899997432211 1112223455555557899999999999876554
No 118
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=91.69 E-value=2.4 Score=34.71 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=32.8
Q ss_pred CCCeEEEEeccccccCCCC-----CChHHHHHHHHHHHHh-CCccEEEeCCcccceEEee
Q 024595 141 KAKWKIVVGHHTIKSAGHH-----GVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~-----~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~~~ 194 (265)
....-++++|-|+....+. +....+ .+|...+++ -+.++-+.||.|.......
T Consensus 211 p~~iDvL~tHtPPlG~gd~~~~~~gqr~GC-~ell~tVe~rvqpk~hVfGhvhe~~Gvta 269 (305)
T KOG3947|consen 211 PGGIDVLITHTPPLGHGDLVPVFSGQRNGC-VELLNTVERRVQPKYHVFGHVHEGHGVTA 269 (305)
T ss_pred ccccceeccCCCCCCcchhcccccCcccCH-HHHHHhHhhccccceEEeeeeecCceeee
Confidence 3444589999998764432 111122 345555554 4678999999998854444
No 119
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=88.87 E-value=0.22 Score=42.11 Aligned_cols=24 Identities=8% Similarity=0.203 Sum_probs=19.7
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.....++++++++++-||.=...
T Consensus 254 ~~~~~Fl~~n~l~~IIR~He~v~~ 277 (321)
T cd07420 254 DVTSKVLQKHGLSLLIRSHECKPE 277 (321)
T ss_pred HHHHHHHHHCCCcEEEEcChhhhc
Confidence 566788999999999999995433
No 120
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=87.68 E-value=0.35 Score=40.77 Aligned_cols=23 Identities=17% Similarity=0.199 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCccEEEeCCcccc
Q 024595 167 LRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
+...+.++++++++++-||.=..
T Consensus 223 ~~~~~Fl~~n~l~~iiR~He~~~ 245 (305)
T cd07416 223 RAVCEFLQKNNLLSIIRAHEAQD 245 (305)
T ss_pred HHHHHHHHHcCCeEEEEeccccc
Confidence 55678899999999999999543
No 121
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=87.41 E-value=0.36 Score=39.95 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCccEEEeCCccc
Q 024595 167 LRLLPILEENNVDMYVNGHDHC 188 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~ 188 (265)
+.+...++++++++++-||.=.
T Consensus 201 ~~~~~Fl~~n~l~~iiR~He~~ 222 (271)
T smart00156 201 DAVDEFLKKNNLKLIIRAHQVV 222 (271)
T ss_pred HHHHHHHHHCCCeEEEecCccc
Confidence 5677899999999999999843
No 122
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=86.00 E-value=0.36 Score=40.25 Aligned_cols=24 Identities=8% Similarity=0.144 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.+...+++.++++++-||.-...
T Consensus 215 ~~~~~Fl~~n~l~~iiR~He~~~~ 238 (285)
T cd07415 215 DVVEEFNHNNGLTLICRAHQLVME 238 (285)
T ss_pred HHHHHHHHHCCCeEEEEcCccccc
Confidence 567788999999999999995543
No 123
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=85.74 E-value=0.91 Score=34.55 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=24.6
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS 193 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~ 193 (265)
....|+++|.|..... . ..+.+++++||+|......
T Consensus 106 ~~~~i~l~H~~~~~~~--~--------------~~~~d~vi~GHtH~~~~~~ 141 (168)
T cd07390 106 GGRRVYLSHYPILEWN--G--------------LDRGSWNLHGHIHSNSPDI 141 (168)
T ss_pred CCEEEEEEeCCcccCC--C--------------CCCCeEEEEeeeCCCCCCC
Confidence 4568999997643211 0 2456899999999987543
No 124
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=85.65 E-value=0.47 Score=40.14 Aligned_cols=20 Identities=35% Similarity=0.614 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCccEEEeCCc
Q 024595 167 LRLLPILEENNVDMYVNGHD 186 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~ 186 (265)
+.+...+++.++++++-||.
T Consensus 243 ~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 243 DRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHCCCeEEEEech
Confidence 56778899999999999998
No 125
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=85.23 E-value=0.42 Score=40.47 Aligned_cols=24 Identities=25% Similarity=0.259 Sum_probs=19.7
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.+...+++.++++++-||.=...
T Consensus 234 ~~~~~Fl~~n~l~~iiR~He~~~~ 257 (316)
T cd07417 234 DVTKRFLEENNLEYIIRSHEVKDE 257 (316)
T ss_pred HHHHHHHHHcCCcEEEECCcccce
Confidence 566788999999999999995543
No 126
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=84.87 E-value=0.63 Score=39.43 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=19.5
Q ss_pred HHHHHHHHhCCccEEEeCCcccc
Q 024595 167 LRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
+.+...+++++.++++-||.-..
T Consensus 232 ~~~~~Fl~~n~l~~IiR~Hq~v~ 254 (320)
T PTZ00480 232 EIVQVFLKKHELDLICRAHQVVE 254 (320)
T ss_pred HHHHHHHHhCCCcEEEEcCcccc
Confidence 56778899999999999999654
No 127
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=84.80 E-value=0.52 Score=40.80 Aligned_cols=20 Identities=25% Similarity=0.393 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCccEEEeCCc
Q 024595 167 LRLLPILEENNVDMYVNGHD 186 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~ 186 (265)
+.+...++++++++++-||.
T Consensus 274 ~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 274 DCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHcCCcEEEECCC
Confidence 56788999999999999999
No 128
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=84.17 E-value=0.48 Score=39.70 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=19.4
Q ss_pred HHHHHHHHhCCccEEEeCCcccc
Q 024595 167 LRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
+.+...+++.++++++-||.-..
T Consensus 225 ~~~~~Fl~~n~l~~iiR~Hq~~~ 247 (294)
T PTZ00244 225 DIVNDFLDMVDMDLIVRAHQVME 247 (294)
T ss_pred HHHHHHHHHcCCcEEEEcCcccc
Confidence 56778899999999999999554
No 129
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=83.59 E-value=0.6 Score=39.12 Aligned_cols=24 Identities=13% Similarity=0.236 Sum_probs=19.8
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.+...+++.+.++++-||.-...
T Consensus 223 ~~~~~Fl~~n~l~~iiR~He~~~~ 246 (293)
T cd07414 223 DVVAKFLNKHDLDLICRAHQVVED 246 (293)
T ss_pred HHHHHHHHHcCCeEEEECCccccC
Confidence 567788999999999999996543
No 130
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=82.86 E-value=0.72 Score=38.80 Aligned_cols=24 Identities=8% Similarity=0.131 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.+...+++.++++++-||.-...
T Consensus 216 ~~~~~Fl~~n~l~~iiR~He~~~~ 239 (303)
T PTZ00239 216 KVTKEFCRLNDLTLICRAHQLVME 239 (303)
T ss_pred HHHHHHHHHCCCcEEEEcChhhcc
Confidence 567788999999999999996543
No 131
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=81.82 E-value=0.45 Score=37.57 Aligned_cols=56 Identities=18% Similarity=0.057 Sum_probs=27.7
Q ss_pred ccCCCEEEecCCccCCCCCCC-------CCC--hhhhhhcccccCCCCCCCceEEcCCCcccCCC
Q 024595 7 KLEIDFVISTGDNFYEDGLTG-------EED--PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGD 62 (265)
Q Consensus 7 ~~~pd~vv~~GD~~~~~g~~~-------~~~--~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~ 62 (265)
+.+|+.+|++|+.+....... ... ......+...+..-.-.+++++|||+||....
T Consensus 29 ~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 29 ASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred cCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccEEEEeCCCcccccc
Confidence 678999999999984221100 000 11111112222211126899999999998654
No 132
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=80.72 E-value=2.3 Score=33.97 Aligned_cols=41 Identities=34% Similarity=0.490 Sum_probs=25.7
Q ss_pred ccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
..+.|.++++||++ +.|.. -.+.+..+. ...++.+.||||.
T Consensus 40 ~~~~d~l~~lGD~v-drG~~------~~~~l~~l~-----~~~~~~v~GNHE~ 80 (218)
T PRK09968 40 CPETDLLISVGDNI-DRGPE------SLNVLRLLN-----QPWFISVKGNHEA 80 (218)
T ss_pred CCCCCEEEECCCCc-CCCcC------HHHHHHHHh-----hCCcEEEECchHH
Confidence 34689999999999 44522 112222211 1246799999995
No 133
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=80.17 E-value=7.4 Score=33.57 Aligned_cols=62 Identities=23% Similarity=0.285 Sum_probs=40.6
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCc---------cEEEeCCcccceEEee
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNV---------DMYVNGHDHCLQHISS 194 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v---------~~vl~GH~H~~~~~~~ 194 (265)
++-|++.+...+.+--|+..-|.|.+..+ ..+....+.+++++++| ++|+.||.|.......
T Consensus 147 ~~~LE~~~~~~~vkl~iLCnPHNP~Grvw---t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls 217 (388)
T COG1168 147 FDALEKAFVDERVKLFILCNPHNPTGRVW---TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLS 217 (388)
T ss_pred HHHHHHHHhcCCccEEEEeCCCCCCCccc---cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcC
Confidence 56688888776544444544454443333 23445678889999987 6889999998765433
No 134
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=68.96 E-value=4 Score=34.82 Aligned_cols=26 Identities=12% Similarity=0.129 Sum_probs=20.2
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEE
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHI 192 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~ 192 (265)
+.+.+++++.++++++-+|.=....+
T Consensus 234 ~~v~~f~~~~~ldlivRaHqvv~dGy 259 (331)
T KOG0374|consen 234 AVVEDFCKKLDLDLIVRAHQVVEDGY 259 (331)
T ss_pred HHHHHHHHHhCcceEEEcCccccccc
Confidence 56677899999999999998544444
No 135
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=65.14 E-value=7 Score=31.12 Aligned_cols=39 Identities=28% Similarity=0.311 Sum_probs=24.1
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
+.|-++++||++ +.|..+ .+.. +.+. ...++.|.||||.
T Consensus 44 ~~D~li~lGDlv-DrGp~s---~~vl---~~l~-----~~~~~~v~GNHE~ 82 (218)
T PRK11439 44 WRDLLISVGDLI-DRGPQS---LRCL---QLLE-----EHWVRAVRGNHEQ 82 (218)
T ss_pred ccCEEEEcCccc-CCCcCH---HHHH---HHHH-----cCCceEeeCchHH
Confidence 579999999999 455211 2222 2111 1235789999995
No 136
>PHA03008 hypothetical protein; Provisional
Probab=64.18 E-value=20 Score=27.93 Aligned_cols=54 Identities=7% Similarity=-0.042 Sum_probs=33.1
Q ss_pred EEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccce---EEeeCCeEEEE
Q 024595 145 KIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQ---HISSNGIEFLT 201 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~---~~~~~~~~~i~ 201 (265)
-||++|.|++...... .. ...|++-+.+-++++-+.||.-.+. ......+.|+.
T Consensus 163 DILITHgPP~GhLD~~--vG-C~~Ll~~I~rVKPKyHVFGh~~~~~~p~~~~y~di~f~n 219 (234)
T PHA03008 163 DILITASPPFAILDDD--LA-CGDLFSKVIKIKPKFHIFNGLTQFSHPNIFIYKDIIFIN 219 (234)
T ss_pred CEEEeCCCCccccccc--cC-cHHHHHHHHHhCCcEEEeCCccccCCCcEEEecceEEEe
Confidence 4999999998754211 01 1334444556678999999954333 33346677764
No 137
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=63.64 E-value=16 Score=28.87 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=29.4
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhccccc-CCCCCCCceEEcCCCcccC
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIY-TAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~-~~~~l~~p~~~i~GNHD~~ 60 (265)
.+.|.+|++||++ +.|. +..+..+.+..+. .....+.++++++||||..
T Consensus 31 ~~~d~lv~lGD~v-drG~---~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 31 GGSTHLVQLGDIF-DRGP---DVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CCCcEEEEECCCc-CCCc---CHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 4689999999999 4542 1122222222211 0112357899999999964
No 138
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=62.79 E-value=3 Score=33.64 Aligned_cols=42 Identities=19% Similarity=0.339 Sum_probs=22.9
Q ss_pred EEecCCccCCCCCCCCCChhhhhhcccccC-CCCCCCceEEcCCCcccCC
Q 024595 13 VISTGDNFYEDGLTGEEDPAFLDSFTSIYT-APSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 13 vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~ 61 (265)
-+++||.+ +.|..+ .+.|--++. +-.-+-.+-.+.||||-+.
T Consensus 73 YLFLGDyV-DRG~~S------vEt~lLLl~lK~rYP~ritLiRGNHEsRq 115 (303)
T KOG0372|consen 73 YLFLGDYV-DRGYYS------VETFLLLLALKVRYPDRITLIRGNHESRQ 115 (303)
T ss_pred eEeecchh-ccccch------HHHHHHHHHHhhcCcceeEEeeccchhhh
Confidence 47889988 455332 122211111 1112456789999999654
No 139
>PRK10799 metal-binding protein; Provisional
Probab=60.55 E-value=13 Score=30.23 Aligned_cols=46 Identities=22% Similarity=0.147 Sum_probs=25.2
Q ss_pred EEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceE
Q 024595 145 KIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQH 191 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~ 191 (265)
-++++|||++-.................+.+.++ .+++-|++....
T Consensus 58 dlIitHHP~~~~~~~~~~~~~~~~~~~~li~~~i-~vy~~Htn~D~~ 103 (247)
T PRK10799 58 DAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDI-NLYGWHLPLDAH 103 (247)
T ss_pred CEEEECCchhccCCCccccchHHHHHHHHHHCCC-eEEEEecchhhC
Confidence 4888999976322111111122233344445666 677888887654
No 140
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=60.47 E-value=38 Score=25.81 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=33.3
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCC
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGH 185 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH 185 (265)
.+-+.+.|.+.-+...|+..|+|++ .....+.+.+.+.+.+.++|+.|=
T Consensus 61 ~~~~~~~l~~~yP~l~ivg~~~g~f-------~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 61 LEKAAANLRRRYPGLRIVGYHHGYF-------DEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred HHHHHHHHHHHCCCeEEEEecCCCC-------ChhhHHHHHHHHHHcCCCEEEEEC
Confidence 5556666666555666777777766 123346677788888999888873
No 141
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=60.30 E-value=2.7 Score=38.55 Aligned_cols=42 Identities=36% Similarity=0.418 Sum_probs=29.3
Q ss_pred HHHHHhCCcc----EEEeCCcccceEE-----eeCCeEEEEeCCCCCCCCC
Q 024595 170 LPILEENNVD----MYVNGHDHCLQHI-----SSNGIEFLTSGGGSKAWRG 211 (265)
Q Consensus 170 ~~~~~~~~v~----~vl~GH~H~~~~~-----~~~~~~~i~~g~~~~~~~~ 211 (265)
..++++.+++ .++.||+-.-... ..+|-.+++-|+-++++..
T Consensus 512 ~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskAYqk 562 (640)
T PF06874_consen 512 DKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKAYQK 562 (640)
T ss_pred HHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhhhcc
Confidence 5677777776 8999998765332 2277788888877776643
No 142
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=58.77 E-value=2.8 Score=36.89 Aligned_cols=48 Identities=23% Similarity=0.384 Sum_probs=28.5
Q ss_pred cccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 2 GLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 2 ~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
+.++++.-+|-+=+.||+. +.|... ......+... .++. .-|||||.-
T Consensus 183 a~~iqrLvVDhLHiVGDIy-DRGP~p---d~Imd~L~~y---hsvD----iQWGNHDil 230 (648)
T COG3855 183 AYLIQRLVVDHLHIVGDIY-DRGPYP---DKIMDTLINY---HSVD----IQWGNHDIL 230 (648)
T ss_pred HHHHHHHhhhheeeecccc-cCCCCc---hHHHHHHhhc---cccc----ccccCcceE
Confidence 4567778899999999955 666321 1222222221 2233 457999963
No 143
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=58.56 E-value=7.8 Score=31.58 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=24.5
Q ss_pred EEEecCCccCCCCCCCC--CC-hhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 12 FVISTGDNFYEDGLTGE--ED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 12 ~vv~~GD~~~~~g~~~~--~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
-++++||.++..|.... .+ .++.++++.+. .+..-..+.+| |++.
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l~---~l~~~~~i~pG-H~~~ 167 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRLA---ALPDDTLVYCA-HEYT 167 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHHH---cCCCCeEEECC-CCch
Confidence 47999998865543221 11 34444444332 34444567788 8864
No 144
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=57.21 E-value=3.9 Score=35.17 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=24.1
Q ss_pred cccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCC
Q 024595 2 GLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLG 55 (265)
Q Consensus 2 ~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~G 55 (265)
+++.++++||+||+.||-. ..+..+... ..+++|+.-+-|
T Consensus 60 ~~~~~~~~Pd~Vlv~GD~~----------~~la~alaA----~~~~ipv~Hiea 99 (346)
T PF02350_consen 60 ADVLEREKPDAVLVLGDRN----------EALAAALAA----FYLNIPVAHIEA 99 (346)
T ss_dssp HHHHHHHT-SEEEEETTSH----------HHHHHHHHH----HHTT-EEEEES-
T ss_pred HHHHHhcCCCEEEEEcCCc----------hHHHHHHHH----HHhCCCEEEecC
Confidence 3456778999999999955 233333222 236889887754
No 145
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=53.58 E-value=18 Score=29.04 Aligned_cols=43 Identities=28% Similarity=0.286 Sum_probs=25.8
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCccc
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDY 59 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~ 59 (265)
+.|.++++||++ +.|.. ..+..+....+. .+-.++++.||||.
T Consensus 37 ~~d~lv~lGDlI-DrG~~---s~evl~~l~~l~----~~~~~~~v~GNHE~ 79 (234)
T cd07423 37 EGRRAVFVGDLV-DRGPD---SPEVLRLVMSMV----AAGAALCVPGNHDN 79 (234)
T ss_pred CCCEEEEECCcc-CCCCC---HHHHHHHHHHHh----hCCcEEEEECCcHH
Confidence 368999999999 45522 122222222111 12357899999996
No 146
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=52.60 E-value=6 Score=31.38 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=23.3
Q ss_pred EEecCCccCCCCCCCCCChhhhhhcccccC-CCCCCCceEEcCCCcccCC
Q 024595 13 VISTGDNFYEDGLTGEEDPAFLDSFTSIYT-APSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 13 vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~~ 61 (265)
-|++||.+ +.|..+ . +.|..++. ..+-...+-.+.||||-+.
T Consensus 76 YiFmGDfV-DRGyyS---L---EtfT~l~~LkaryP~~ITLlRGNHEsRq 118 (306)
T KOG0373|consen 76 YIFMGDFV-DRGYYS---L---ETFTLLLLLKARYPAKITLLRGNHESRQ 118 (306)
T ss_pred eEEecccc-cccccc---H---HHHHHHHHHhhcCCceeEEeeccchhhh
Confidence 57899999 455322 1 22222221 1123456778999999653
No 147
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=49.96 E-value=42 Score=29.22 Aligned_cols=52 Identities=25% Similarity=0.147 Sum_probs=35.0
Q ss_pred CCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 140 SKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 140 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
..+..+|+++|+ ...+..........+..-|...++++++.+|-|..+-...
T Consensus 222 k~adlviv~~Hw---G~ey~~~p~~~q~~~a~~lidAGa~iIvGhhpHvlqpiE~ 273 (372)
T COG2843 222 KGADLVIVQPHW---GVEYAYEPAAGQRALARRLIDAGADIIVGHHPHVLQPIEI 273 (372)
T ss_pred ccCCEEEEeccc---cccccCCCcHHHHHHHHHHHhcCcCeEecCCCCcCcceEE
Confidence 456788888888 2222222223345566666668999999999999886655
No 148
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=48.45 E-value=23 Score=28.71 Aligned_cols=44 Identities=11% Similarity=0.140 Sum_probs=23.1
Q ss_pred EEEEeccccccCCCCCCh-H-HHHHHHHHHHHhCCccEEEeCCcccce
Q 024595 145 KIVVGHHTIKSAGHHGVT-K-ELLLRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~~-~-~~~~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
.+|++|||++-....... . ...+.+..++ ++++ .+++-|+....
T Consensus 55 dlIItHHP~~f~~~~~~~~~~~~~~~~~~li-~~~I-~vy~~Ht~lD~ 100 (241)
T PF01784_consen 55 DLIITHHPLFFKPLKSLTGDDYKGKIIEKLI-KNGI-SVYSAHTNLDA 100 (241)
T ss_dssp SEEEESS-SSSSTSSHCHCHSHHHHHHHHHH-HTT--EEEEESHHHHH
T ss_pred CEEEEcCchhhcCCccccccchhhHHHHHHH-HCCC-EEEEecccccc
Confidence 489999998643322111 1 1233444444 4666 66777887543
No 149
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=46.79 E-value=9.7 Score=33.02 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=25.9
Q ss_pred CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccEEEeCCcc
Q 024595 141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDMYVNGHDH 187 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H 187 (265)
+.+++++..| +-...+ ....++.+.+..+++++ ++.+++.=|.-
T Consensus 203 ~~~~iLvT~H-RreN~~--~~~~~i~~al~~i~~~~~~~~viyp~H~~ 247 (383)
T COG0381 203 DKKYILVTAH-RRENVG--EPLEEICEALREIAEEYPDVIVIYPVHPR 247 (383)
T ss_pred cCcEEEEEcc-hhhccc--ccHHHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 3345554454 333222 22345567788888888 77788877764
No 150
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=45.73 E-value=64 Score=25.82 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=18.6
Q ss_pred hhhhHHHHHHHHHHHhhc--CCCCeEEEEecc
Q 024595 122 RKEYLSDLLKDVDGALKN--SKAKWKIVVGHH 151 (265)
Q Consensus 122 ~~~~~~~Q~~wl~~~l~~--~~~~~~iv~~H~ 151 (265)
+..+..+.++.+.+.+.. ...+.++++.|-
T Consensus 62 q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 62 QAEFLAEAIKYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCceEEEEEc
Confidence 344555666666666632 356778888884
No 151
>PRK10241 hydroxyacylglutathione hydrolase; Provisional
Probab=45.08 E-value=15 Score=29.90 Aligned_cols=44 Identities=18% Similarity=0.296 Sum_probs=24.2
Q ss_pred EEecCCccCCCCCCCCC--C-hhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 13 VISTGDNFYEDGLTGEE--D-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 13 vv~~GD~~~~~g~~~~~--~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
++++||.++..|..... + .++.+.++.+. .+...+.+.+| |++.
T Consensus 122 ~lFtGDtlf~~g~gr~f~g~~~~~~~Sl~kl~---~l~~~t~i~pg-H~y~ 168 (251)
T PRK10241 122 YLFCGDTLFSGGCGRLFEGTASQMYQSLKKIN---ALPDDTLICCA-HEYT 168 (251)
T ss_pred cEEEcCeeccCCcCCCCCCCHHHHHHHHHHHH---cCCCCEEEECC-CCCh
Confidence 59999977654432211 1 34444444332 35455666677 8875
No 152
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=42.49 E-value=1.1e+02 Score=23.29 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=30.5
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeC
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNG 184 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~G 184 (265)
++-+.+.+.+.-+.-.|+-+|+|++... ....+...+.+.+.++|+.|
T Consensus 59 ~~~~~~~l~~~yp~l~i~g~~~g~~~~~-------~~~~i~~~I~~~~pdiv~vg 106 (171)
T cd06533 59 LEKAAERLRARYPGLKIVGYHHGYFGPE-------EEEEIIERINASGADILFVG 106 (171)
T ss_pred HHHHHHHHHHHCCCcEEEEecCCCCChh-------hHHHHHHHHHHcCCCEEEEE
Confidence 4555556665445556777788776421 12336777888888888877
No 153
>PRK14347 lipoate-protein ligase B; Provisional
Probab=41.60 E-value=71 Score=25.35 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC
Q 024595 123 KEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV 161 (265)
Q Consensus 123 ~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~ 161 (265)
....+.|.++.++..+...+...+++-|.|+|+.+..+.
T Consensus 14 ~~a~~~q~~~~~~~~~~~~~d~llllEH~pVyT~G~~~~ 52 (209)
T PRK14347 14 QVTLKLMEDYVNKVISDHEPEIVYLVEHSEVYTAGTNYK 52 (209)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCeeCCCCCC
Confidence 344566777777666555456788899999998876544
No 154
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=39.51 E-value=1.6e+02 Score=21.94 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=53.9
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-----CCeEEEEeCC
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-----NGIEFLTSGG 204 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-----~~~~~i~~g~ 204 (265)
.+.|++.+.......++.+-|-.+. +.........+..++++.+.++||.||+-....... -+..++.
T Consensus 47 ~~~l~~~l~~~G~d~v~~~~~~~~~----~~~~~~~a~~l~~~~~~~~~~lVl~~~t~~g~~la~~lA~~L~~~~v~--- 119 (164)
T PF01012_consen 47 AEALRKALAKYGADKVYHIDDPALA----EYDPEAYADALAELIKEEGPDLVLFGSTSFGRDLAPRLAARLGAPLVT--- 119 (164)
T ss_dssp HHHHHHHHHSTTESEEEEEE-GGGT----TC-HHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHHHT-EEEE---
T ss_pred HHHHhhhhhhcCCcEEEEecCcccc----ccCHHHHHHHHHHHHHhcCCCEEEEcCcCCCCcHHHHHHHHhCCCccc---
Confidence 4445666664444444444443221 112344567788899998999999999976654221 2333331
Q ss_pred CCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEecCCCeEEEEEcc
Q 024595 205 GSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIP 258 (265)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i~ 258 (265)
+..-++.+++.+.++-.-..|+.+-+..++
T Consensus 120 ------------------------~v~~l~~~~~~~~~~r~~~gG~~~~~~~~~ 149 (164)
T PF01012_consen 120 ------------------------DVTDLEVEDGGLVVTRPVYGGKVVATVRLP 149 (164)
T ss_dssp ------------------------EEEEEEEETTEEEEEEEETTTTEEEEEECS
T ss_pred ------------------------eEEEEEECCCeEEEEEECCCCEEEEEEECC
Confidence 233555555666665555666666666655
No 155
>PRK14341 lipoate-protein ligase B; Provisional
Probab=38.88 E-value=79 Score=25.19 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC
Q 024595 124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV 161 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~ 161 (265)
...+-|.+++++..+...+...+++-|.|+|+.+..+.
T Consensus 17 ~~~~~q~~~~~~~~~~~~~~~llllEH~pVyT~G~~~~ 54 (213)
T PRK14341 17 EALAFMEARVAAIAAGTADELVWLLEHPPLYTAGTSAK 54 (213)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEECCCCCeeCCCCCC
Confidence 34455666666655544445577889999998776543
No 156
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=38.85 E-value=36 Score=28.23 Aligned_cols=25 Identities=36% Similarity=0.557 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhCCcc-EEEeCCcc
Q 024595 163 KELLLRLLPILEENNVD-MYVNGHDH 187 (265)
Q Consensus 163 ~~~~~~l~~~~~~~~v~-~vl~GH~H 187 (265)
.+..+.+..++++++.+ +||+||+=
T Consensus 140 ~eqp~~i~~Ll~~~~PDIlViTGHD~ 165 (287)
T PF05582_consen 140 KEQPEKIYRLLEEYRPDILVITGHDG 165 (287)
T ss_pred HHhhHHHHHHHHHcCCCEEEEeCchh
Confidence 34557789999999887 89999985
No 157
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=36.11 E-value=19 Score=31.26 Aligned_cols=43 Identities=21% Similarity=0.170 Sum_probs=27.6
Q ss_pred ccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceE-EcCCCccc
Q 024595 3 LIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWY-NVLGNHDY 59 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~-~i~GNHD~ 59 (265)
++.++++||+|+..||-. ..+...... ..+++|++ +--|++-+
T Consensus 87 ~~~~~~~Pd~vlv~GD~~----------~~la~alaA----~~~~IPv~HveaG~rs~ 130 (365)
T TIGR03568 87 DAFERLKPDLVVVLGDRF----------EMLAAAIAA----ALLNIPIAHIHGGEVTE 130 (365)
T ss_pred HHHHHhCCCEEEEeCCch----------HHHHHHHHH----HHhCCcEEEEECCccCC
Confidence 456778999999999954 122222222 23688988 55666743
No 158
>PF13285 DUF4073: Domain of unknown function (DUF4073)
Probab=34.97 E-value=1.9e+02 Score=21.43 Aligned_cols=30 Identities=27% Similarity=0.303 Sum_probs=26.1
Q ss_pred EEEEEeCCeEEEEEEe-cCCCeEEEEEccCC
Q 024595 231 MSVKMTRSEAVVLFYD-VHGNILHKWSIPKE 260 (265)
Q Consensus 231 ~~~~v~~~~i~~~~~~-~~g~~~~~~~i~~~ 260 (265)
+.+.++++++.++.++ ..|+.|.+.+|.-.
T Consensus 54 L~V~vy~drV~v~A~Df~~~~~IkklsI~~~ 84 (158)
T PF13285_consen 54 LQVEVYGDRVVVEARDFKRGKWIKKLSIHDG 84 (158)
T ss_pred eEEEEeCCeEEEEEEeccCCcchheeeeehh
Confidence 6889999999999999 78999998877654
No 159
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=34.30 E-value=36 Score=28.11 Aligned_cols=25 Identities=32% Similarity=0.590 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCcc-EEEeCCccc
Q 024595 164 ELLLRLLPILEENNVD-MYVNGHDHC 188 (265)
Q Consensus 164 ~~~~~l~~~~~~~~v~-~vl~GH~H~ 188 (265)
+..+.+.+++++++.+ +|++||+=.
T Consensus 140 eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 140 EMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred hchHHHHHHHHHhCCCEEEEeCchhh
Confidence 3346778999999887 899999943
No 160
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=34.22 E-value=52 Score=26.85 Aligned_cols=44 Identities=18% Similarity=0.180 Sum_probs=24.3
Q ss_pred EEEEeccccccCCC-CCChHHHHHHHHHHHHhCCccEEEeCCcccce
Q 024595 145 KIVVGHHTIKSAGH-HGVTKELLLRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 145 ~iv~~H~P~~~~~~-~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
-++++|||++-... .-........+. .+.++++ .|++-|+....
T Consensus 59 dlIitHHP~~f~~~~~~~~~~~~~~~~-~li~~~I-~vy~~Ht~lD~ 103 (249)
T TIGR00486 59 DLIITHHPLIWKPLKRLIRGIKPGRLK-ILLQNDI-SLYSAHTNLDA 103 (249)
T ss_pred CEEEEcCccccCCcccccCCCHHHHHH-HHHHCCC-eEEEeecchhc
Confidence 58999999853321 111111223444 4555676 67777886544
No 161
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=33.34 E-value=37 Score=31.14 Aligned_cols=26 Identities=23% Similarity=0.176 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHhhcCCCCeEEEEecc
Q 024595 125 YLSDLLKDVDGALKNSKAKWKIVVGHH 151 (265)
Q Consensus 125 ~~~~Q~~wl~~~l~~~~~~~~iv~~H~ 151 (265)
+.-+-+.||++.|.+.+. .+||++|-
T Consensus 184 LD~~~i~WLe~~L~~~~g-tviiVSHD 209 (530)
T COG0488 184 LDLESIEWLEDYLKRYPG-TVIVVSHD 209 (530)
T ss_pred cCHHHHHHHHHHHHhCCC-cEEEEeCC
Confidence 345679999999998666 78899994
No 162
>PF13860 FlgD_ig: FlgD Ig-like domain; PDB: 3C12_A 3OSV_A.
Probab=32.79 E-value=1.1e+02 Score=19.79 Aligned_cols=26 Identities=19% Similarity=0.454 Sum_probs=19.0
Q ss_pred EEeCC--eEEEEEEecCCCeEEEEEccC
Q 024595 234 KMTRS--EAVVLFYDVHGNILHKWSIPK 259 (265)
Q Consensus 234 ~v~~~--~i~~~~~~~~g~~~~~~~i~~ 259 (265)
.+.++ .+++..++.+|++|.++.+..
T Consensus 19 ~l~~~a~~v~v~I~d~~G~~V~t~~~~~ 46 (81)
T PF13860_consen 19 TLPEDADNVTVTIYDSNGQVVRTISLGS 46 (81)
T ss_dssp EECSSCEEEEEEEEETTS-EEEEEEEEE
T ss_pred eCCCcccEEEEEEEcCCCCEEEEEEcCC
Confidence 35543 678888999999999888743
No 163
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=32.51 E-value=1.4e+02 Score=26.37 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=45.0
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCc---------cEEEeCCcccceEEee-CCeEE
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNV---------DMYVNGHDHCLQHISS-NGIEF 199 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v---------~~vl~GH~H~~~~~~~-~~~~~ 199 (265)
..||+..+.. +.+.+|+.+-|.+.+.. ...+..+++.++++++++ .++..|+.|......+ -.=..
T Consensus 162 ~~~le~~~t~-kTk~Ii~ntPhNPtGkv---fsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ert 237 (420)
T KOG0257|consen 162 PEELESKITE-KTKAIILNTPHNPTGKV---FSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERT 237 (420)
T ss_pred hHHHHhhccC-CccEEEEeCCCCCcCcc---cCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheE
Confidence 6788888765 35556666655443221 224556788899999985 2344677776665543 11135
Q ss_pred EEeCCCCCC
Q 024595 200 LTSGGGSKA 208 (265)
Q Consensus 200 i~~g~~~~~ 208 (265)
++.|+.|+.
T Consensus 238 itvgS~gKt 246 (420)
T KOG0257|consen 238 ITVGSFGKT 246 (420)
T ss_pred EEeccccce
Confidence 566777764
No 164
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=31.13 E-value=2e+02 Score=23.62 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=31.3
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeC
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNG 184 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~G 184 (265)
.+-.++.|.+.-+..+|+..|+..+... + .+.+...+..++.++++.|
T Consensus 121 ~~~a~~~l~~~~p~l~ivg~h~GYf~~~------e-~~~i~~~I~~s~pdil~Vg 168 (253)
T COG1922 121 AEQAAAKLRAKYPGLKIVGSHDGYFDPE------E-EEAIVERIAASGPDILLVG 168 (253)
T ss_pred HHHHHHHHHHHCCCceEEEecCCCCChh------h-HHHHHHHHHhcCCCEEEEe
Confidence 4445566665445567888888655321 2 2467777888889988887
No 165
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=28.67 E-value=66 Score=22.96 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=13.2
Q ss_pred HHHHHHHHHhCC-ccEEEeCCcc
Q 024595 166 LLRLLPILEENN-VDMYVNGHDH 187 (265)
Q Consensus 166 ~~~l~~~~~~~~-v~~vl~GH~H 187 (265)
.+.+..++++++ ..++++||.=
T Consensus 51 ~~~l~~~~~~~~~~~i~itGHSL 73 (140)
T PF01764_consen 51 LDALKELVEKYPDYSIVITGHSL 73 (140)
T ss_dssp HHHHHHHHHHSTTSEEEEEEETH
T ss_pred HHHHHHHHhcccCccchhhccch
Confidence 345555555553 5677777763
No 166
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=27.35 E-value=45 Score=28.73 Aligned_cols=14 Identities=36% Similarity=0.650 Sum_probs=11.5
Q ss_pred CCceEEcCCCcccC
Q 024595 47 QKQWYNVLGNHDYR 60 (265)
Q Consensus 47 ~~p~~~i~GNHD~~ 60 (265)
....+++.||||-.
T Consensus 146 p~tl~lLRGNHECr 159 (517)
T KOG0375|consen 146 PKTLFLLRGNHECR 159 (517)
T ss_pred CCeEEEecCCcchh
Confidence 56789999999954
No 167
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=24.82 E-value=42 Score=27.57 Aligned_cols=13 Identities=31% Similarity=0.417 Sum_probs=10.0
Q ss_pred CceEEcCCCcccC
Q 024595 48 KQWYNVLGNHDYR 60 (265)
Q Consensus 48 ~p~~~i~GNHD~~ 60 (265)
-.+-.++||||-+
T Consensus 119 ~rvtilrGNHEsr 131 (319)
T KOG0371|consen 119 DRVTILRGNHESR 131 (319)
T ss_pred ceeEEecCchHHH
Confidence 3566889999965
No 168
>PRK14345 lipoate-protein ligase B; Provisional
Probab=24.66 E-value=1.7e+02 Score=23.72 Aligned_cols=37 Identities=14% Similarity=0.129 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCC
Q 024595 124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHG 160 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~ 160 (265)
...+-|.++.++..+......++++-|.|+|+.+..+
T Consensus 24 ~~~~~Q~~l~~~~~~~~~~d~llllEH~pVyT~Gr~~ 60 (234)
T PRK14345 24 EAWDLQRELADARVAGEGPDTLLLLEHPAVYTAGKRT 60 (234)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEcCCCCccCCCCC
Confidence 3345677777666555344567788999999877644
No 169
>PF09313 DUF1971: Domain of unknown function (DUF1971); InterPro: IPR015392 This uncharacterised domain is predominantly found in bacterial Tellurite resistance proteins. ; PDB: 3BB6_C 3M70_A 3DL3_I.
Probab=23.74 E-value=1.2e+02 Score=19.98 Aligned_cols=36 Identities=8% Similarity=-0.011 Sum_probs=27.8
Q ss_pred cCCCeEEEEEeCCeEEEEEEecCCCeEEEEEccCCC
Q 024595 226 DGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIPKEP 261 (265)
Q Consensus 226 ~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i~~~~ 261 (265)
...-|..+.|-++++++...+..|+.+.+..+.+..
T Consensus 22 K~GtWg~l~Vl~G~L~f~~~~~~~~~~~~~~~~~~~ 57 (82)
T PF09313_consen 22 KAGTWGKLRVLEGELKFYGLDEEGEEPEEEVFIPAG 57 (82)
T ss_dssp STTEEEEEEEEESEEEEEEESSTT-SESEEEEEETT
T ss_pred CCCeEEEEEEEeeEEEEEEECCCCCceeEEEEeCCC
Confidence 356899999999999999999888777766655543
No 170
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=22.07 E-value=66 Score=26.02 Aligned_cols=17 Identities=24% Similarity=0.303 Sum_probs=13.9
Q ss_pred CCCCceEEcCCCcccCC
Q 024595 45 SLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 45 ~l~~p~~~i~GNHD~~~ 61 (265)
.++..+.++.||||..-
T Consensus 125 rinknvvvlagnhein~ 141 (318)
T PF13258_consen 125 RINKNVVVLAGNHEINF 141 (318)
T ss_pred ccccceEEEecCceecc
Confidence 35788999999999753
No 171
>PF02078 Synapsin: Synapsin, N-terminal domain; InterPro: IPR020897 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments). The family comprises 5 homologous proteins Ia, Ib, IIa, IIb and III. Synapsins I, II, and III are encoded by 3 different genes. The a and b isoforms of synapsin I and II are splice variants of the primary transcripts []. Synapsin I is mainly associated with regulation of neurotransmitter release from presynaptic neuron terminals []. Synapsin II, as well as being involved in neurotransmitter release, has a role in the synaptogenesis and synaptic plasticity responsible for long term potentiation []. Recent studies implicate synapsin III with a developmental role in neurite elongation and synapse formation that is distinct from the functions of synapsins I and II []. Structurally, synapsins are multidomain proteins, of which 3 domains are common to all the mammalian forms. The N-terminal `A' domain is ~30 residues long and contains a serine residue that serves as an acceptor site for protein kinase-mediated phosphorylation. This is followed by the `B' linker domain, which is ~80 residues long and is relatively poorly conserved. Domain `C' is the longest, spanning approximately 300 residues. This domain is highly conserved across all the synapsins (including those from Drosophila) and is possessed by all splice variants. The remaining six domains, D-I, are not shared by all the synapsins and differ both between the primary transcripts and the splice variants. This entry represents the pre-ATP-grasp structural domain found in synapsins, which precedes the ATP-grasp domain. The structure of the pre-ATP-grasp domain consists of alpha/beta/alpha in three layers, and is possibly a rudiment form of the Rossmann-fold. This domain can have a substrate-binding function.; GO: 0007269 neurotransmitter secretion, 0008021 synaptic vesicle; PDB: 1PX2_A 1PK8_F 2P0A_A 1AUV_B 1AUX_A 1I7N_A 1I7L_A.
Probab=21.65 E-value=51 Score=22.83 Aligned_cols=18 Identities=17% Similarity=0.198 Sum_probs=10.6
Q ss_pred ccccccCCCEEEecCCcc
Q 024595 3 LIGEKLEIDFVISTGDNF 20 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~ 20 (265)
+.++..+||||++-.-..
T Consensus 66 Kv~RsfkPDFvLiRQh~~ 83 (105)
T PF02078_consen 66 KVVRSFKPDFVLIRQHAR 83 (105)
T ss_dssp EEEEEE--SEEEE-S-SB
T ss_pred eeeecccCcEEEEccCcc
Confidence 566778999999877644
No 172
>PRK14348 lipoate-protein ligase B; Provisional
Probab=21.12 E-value=2.3e+02 Score=22.71 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHhhcC-----CCCeEEEEeccccccCCCCCCh
Q 024595 124 EYLSDLLKDVDGALKNS-----KAKWKIVVGHHTIKSAGHHGVT 162 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~~-----~~~~~iv~~H~P~~~~~~~~~~ 162 (265)
...+.|.+|.++..... .+...+++-|.|+|+.+..+..
T Consensus 15 ~a~~~q~~~~~~~~~~~~~~~~~~d~llllEH~pVyT~G~~~~~ 58 (221)
T PRK14348 15 EAWSRQTEWFDALVHAKQNGESYENRIIFCEHPHVYTLGRSGKE 58 (221)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCEEEEEcCCCCeeCCcCCCc
Confidence 34466777776654431 1356788899999998876543
Done!