Query 024595
Match_columns 265
No_of_seqs 134 out of 1621
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 11:00:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024595.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024595hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tgh_A Glideosome-associated p 100.0 3.9E-42 1.3E-46 289.9 21.8 248 1-264 26-311 (342)
2 1ute_A Protein (II purple acid 100.0 4.7E-35 1.6E-39 245.5 22.0 253 5-263 39-306 (313)
3 1xzw_A Purple acid phosphatase 100.0 1.4E-30 4.8E-35 227.6 16.6 232 8-261 153-423 (426)
4 2qfp_A Purple acid phosphatase 100.0 6.8E-29 2.3E-33 216.8 16.1 230 9-261 147-416 (424)
5 2yeq_A Apased, PHOD, alkaline 99.9 1E-24 3.4E-29 194.2 18.3 239 7-246 140-458 (527)
6 3d03_A Phosphohydrolase; glyce 99.9 2.9E-24 1E-28 176.6 16.6 210 9-247 41-254 (274)
7 3ib7_A ICC protein; metallopho 99.9 8.1E-25 2.8E-29 184.7 10.7 211 8-247 65-278 (330)
8 2nxf_A Putative dimetal phosph 99.9 4.5E-24 1.5E-28 179.2 8.7 223 7-246 49-312 (322)
9 2xmo_A LMO2642 protein; phosph 99.8 1.5E-19 5.1E-24 158.6 13.9 210 5-246 88-331 (443)
10 2q8u_A Exonuclease, putative; 99.7 1.1E-16 3.7E-21 135.4 6.8 221 4-257 56-289 (336)
11 1uf3_A Hypothetical protein TT 99.6 5.7E-16 2E-20 123.4 8.0 193 5-245 28-225 (228)
12 2yvt_A Hypothetical protein AQ 99.6 3.6E-15 1.2E-19 121.4 9.5 163 46-243 88-257 (260)
13 3av0_A DNA double-strand break 99.5 4.9E-14 1.7E-18 121.2 13.0 212 5-256 56-273 (386)
14 1z2w_A Vacuolar protein sortin 99.5 3.9E-13 1.3E-17 104.5 16.8 100 144-259 90-191 (192)
15 3tho_B Exonuclease, putative; 99.5 2.1E-14 7E-19 123.2 7.4 221 4-258 38-272 (379)
16 2a22_A Vacuolar protein sortin 99.5 2.8E-12 9.7E-17 101.3 18.3 93 143-251 113-205 (215)
17 3ck2_A Conserved uncharacteriz 99.5 4.4E-13 1.5E-17 102.7 13.1 94 144-256 78-171 (176)
18 1nnw_A Hypothetical protein; s 99.5 3.9E-14 1.3E-18 114.8 5.3 111 123-246 108-223 (252)
19 1s3l_A Hypothetical protein MJ 99.4 7.9E-12 2.7E-16 96.8 12.1 72 143-242 115-187 (190)
20 3rqz_A Metallophosphoesterase; 99.3 1.7E-12 5.8E-17 104.8 7.8 106 124-245 92-218 (246)
21 3qfm_A SAPH, putative uncharac 99.3 1.2E-12 4E-17 107.1 6.2 115 125-246 108-228 (270)
22 3rl5_A Metallophosphoesterase 99.3 9.3E-12 3.2E-16 102.1 10.6 73 138-210 203-280 (296)
23 1ii7_A MRE11 nuclease; RAD50, 99.3 1.5E-11 5.3E-16 103.6 10.4 106 143-258 166-279 (333)
24 3t1i_A Double-strand break rep 99.3 6.4E-11 2.2E-15 102.1 14.3 98 143-257 230-332 (431)
25 4fbw_A DNA repair protein RAD3 99.3 1.1E-10 3.8E-15 100.2 15.6 96 141-253 209-309 (417)
26 4fbk_A DNA repair and telomere 99.3 1.1E-10 3.9E-15 100.9 15.3 100 142-258 273-377 (472)
27 2kkn_A Uncharacterized protein 99.2 5E-10 1.7E-14 85.6 13.7 75 144-246 103-177 (178)
28 1xm7_A Hypothetical protein AQ 99.1 8.9E-10 3.1E-14 85.5 10.9 62 143-205 106-172 (195)
29 1su1_A Hypothetical protein YF 99.1 5.1E-09 1.7E-13 82.1 14.8 83 144-257 123-205 (208)
30 1hp1_A 5'-nucleotidase; metall 98.6 6.4E-07 2.2E-11 79.7 12.9 52 141-192 183-234 (516)
31 1g5b_A Serine/threonine protei 98.3 9.3E-07 3.2E-11 69.7 6.6 83 123-205 109-206 (221)
32 2wdc_A SOXB, sulfur oxidation 98.1 5E-06 1.7E-10 74.6 7.9 56 136-204 249-307 (562)
33 2z1a_A 5'-nucleotidase; metal- 98.1 4.4E-06 1.5E-10 74.9 6.3 49 130-191 195-244 (552)
34 3qfk_A Uncharacterized protein 98.0 1.2E-05 4.2E-10 71.6 7.1 64 141-206 198-268 (527)
35 3ive_A Nucleotidase; structura 97.9 1.8E-05 6.1E-10 70.2 7.7 65 135-200 180-250 (509)
36 4h2g_A 5'-nucleotidase; dimer, 97.5 5.3E-05 1.8E-09 67.8 4.3 41 137-190 204-245 (546)
37 3c9f_A 5'-nucleotidase; 2',3'- 97.5 0.00055 1.9E-08 61.2 10.1 68 131-205 188-259 (557)
38 3ztv_A NAD nucleotidase, NADN; 97.5 0.00075 2.6E-08 60.8 10.6 43 136-191 189-232 (579)
39 1t71_A Phosphatase, conserved 97.2 0.0024 8.3E-08 51.7 10.1 59 133-201 141-202 (281)
40 4h1s_A 5'-nucleotidase; hydrol 96.9 0.0021 7.1E-08 57.3 7.6 45 133-190 178-223 (530)
41 2z06_A Putative uncharacterize 96.3 0.1 3.5E-06 41.4 12.7 51 142-202 137-190 (252)
42 1t70_A Phosphatase; crystal, X 96.2 0.075 2.6E-06 42.4 11.7 60 133-202 131-193 (255)
43 2dfj_A Diadenosinetetraphospha 95.4 0.003 1E-07 51.4 0.4 43 8-60 27-69 (280)
44 2qjc_A Diadenosine tetraphosph 95.0 0.0049 1.7E-07 49.6 0.3 28 177-204 196-225 (262)
45 2z72_A Protein-tyrosine-phosph 93.8 0.012 4E-07 49.4 0.1 24 167-190 268-291 (342)
46 3gve_A YFKN protein; alpha-bet 93.6 0.27 9.2E-06 41.0 8.2 51 136-190 202-254 (341)
47 2ie4_C PP2A-alpha;, serine/thr 91.6 0.042 1.4E-06 45.2 0.6 26 167-192 223-248 (309)
48 1fjm_A Protein serine/threonin 90.3 0.081 2.8E-06 43.9 1.2 22 169-190 232-253 (330)
49 3e7a_A PP-1A, serine/threonine 89.4 0.086 2.9E-06 43.1 0.6 23 167-189 229-251 (299)
50 1wao_1 Serine/threonine protei 89.0 0.093 3.2E-06 45.9 0.6 28 167-194 387-414 (477)
51 3ll8_A Serine/threonine-protei 88.4 0.11 3.7E-06 43.5 0.5 23 167-189 250-272 (357)
52 3icf_A PPT, serine/threonine-p 87.6 0.13 4.4E-06 42.7 0.5 27 167-193 238-264 (335)
53 3h63_A Serine/threonine-protei 87.5 0.14 4.8E-06 42.1 0.7 24 167-190 234-257 (315)
54 3jyf_A 2',3'-cyclic nucleotide 87.1 1.3 4.6E-05 36.7 6.4 50 136-190 196-247 (339)
55 1aui_A Calcineurin, serine/thr 85.3 0.23 7.7E-06 43.6 0.8 24 167-190 263-286 (521)
56 3flo_A DNA polymerase alpha su 80.1 0.98 3.4E-05 39.0 2.8 54 8-61 179-248 (460)
57 3e0j_A DNA polymerase subunit 77.6 1 3.6E-05 39.1 2.2 55 47-101 296-356 (476)
58 2yyb_A Hypothetical protein TT 54.2 16 0.00055 28.5 4.5 44 145-190 59-102 (242)
59 2fyw_A Conserved hypothetical 46.4 26 0.00089 27.7 4.7 44 145-189 61-105 (267)
60 1nmo_A Hypothetical protein YB 37.7 37 0.0013 26.5 4.3 52 133-189 49-101 (247)
61 2gx8_A NIF3-related protein; s 34.7 48 0.0016 28.0 4.7 43 145-188 87-130 (397)
62 2nyd_A UPF0135 protein SA1388; 34.6 44 0.0015 27.9 4.4 42 145-188 63-105 (370)
63 2qjc_A Diadenosine tetraphosph 33.8 14 0.00049 29.1 1.3 39 10-60 47-85 (262)
64 3ldt_A Outer membrane protein, 32.3 70 0.0024 23.2 4.8 65 124-189 22-97 (169)
65 1wao_1 Serine/threonine protei 31.9 2.4E+02 0.0081 24.0 9.3 45 10-60 241-285 (477)
66 4hwg_A UDP-N-acetylglucosamine 28.1 21 0.0007 30.0 1.4 18 3-20 88-105 (385)
67 2z72_A Protein-tyrosine-phosph 26.1 48 0.0016 27.2 3.3 48 9-60 105-153 (342)
68 2v2f_A Penicillin binding prot 20.4 75 0.0026 14.7 2.1 16 241-256 6-21 (26)
No 1
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.9e-42 Score=289.92 Aligned_cols=248 Identities=24% Similarity=0.467 Sum_probs=195.9
Q ss_pred CcccccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCC--CCCCceEEcCCCcccCCCccccccccc-------
Q 024595 1 MGLIGEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAP--SLQKQWYNVLGNHDYRGDVEAQLSPVL------- 71 (265)
Q Consensus 1 ~~~~~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~--~l~~p~~~i~GNHD~~~~~~~~~~~~~------- 71 (265)
|.+++++.+|||||++||++|. |..+..+++|.+.|+.++... .+++||++++||||+.++..++..+..
T Consensus 26 m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~ 104 (342)
T 3tgh_A 26 FKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKN 104 (342)
T ss_dssp HHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC------
T ss_pred HHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhccccccc
Confidence 3456777899999999999987 877667788999998887653 468999999999999988666655422
Q ss_pred ----------cccCCCceeeee-eEe----cC---------c----eEEEEEEeCccccccccCCCCCCCCCccccchhh
Q 024595 72 ----------TRKDSRWLCSRS-FIL----DA---------E----IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRK 123 (265)
Q Consensus 72 ----------~~~~~~~~~~~~-y~~----~~---------~----~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (265)
...+++|.+|.. |.+ .. + .++||+|||...... ..+.+. ..
T Consensus 105 ~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~---------~~~~~~--~~ 173 (342)
T 3tgh_A 105 GETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSN---------FPYKKI--HE 173 (342)
T ss_dssp ---------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEECCTTTTSTT---------CSCHHH--HH
T ss_pred ccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEEeCcccccC---------Cccccc--ch
Confidence 234678988743 332 11 2 499999999875321 122222 23
Q ss_pred hhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeC
Q 024595 124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSG 203 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g 203 (265)
...++|++||++.|+ +++|+||++|||+++.+.++....+++.|.+++++++|+++|+||.|.+++....++.|+++|
T Consensus 174 ~~~~~Ql~WLe~~L~--~~~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~g~~~iv~G 251 (342)
T 3tgh_A 174 KAWNDLKSQLSVAKK--IADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCG 251 (342)
T ss_dssp HHHHHHHHHHHHHHH--HCSEEEEECSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHhhc--cCCcEEEEECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEeeCCcEEEEeC
Confidence 456899999999994 458999999999999887776667788999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe-cCCCeEEEEEccCCCccC
Q 024595 204 GGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD-VHGNILHKWSIPKEPLKA 264 (265)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~~~ 264 (265)
++|..+..... ......+....+||.+++++++++++++++ .+|+++++++|.|+..++
T Consensus 252 a~g~~~~~~~~--~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~~~~ 311 (342)
T 3tgh_A 252 SGSMSQGKSGM--KNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKKT 311 (342)
T ss_dssp CSSCCCCCCSS--CCTTEEEEECSSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCCCSS
T ss_pred ccccccccCCC--CCCcceeecCCCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCCCcc
Confidence 99887653221 123445667899999999999999999999 999999999999986543
No 2
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=100.00 E-value=4.7e-35 Score=245.52 Aligned_cols=253 Identities=28% Similarity=0.457 Sum_probs=179.0
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCC-CCceEEcCCCcccCCCccccccccccccCCCceee-e
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSL-QKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCS-R 82 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l-~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~-~ 82 (265)
+++.+|||||++||++|..|.....+.++.+.++.++....+ ++|+++++||||+..+......+ .....+|..+ .
T Consensus 39 ~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~--~~~~~~~~~~~~ 116 (313)
T 1ute_A 39 VKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY--SKISKRWNFPSP 116 (313)
T ss_dssp HHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHG--GGTSTTEECCSS
T ss_pred HHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccc--cccCCCccCccc
Confidence 455799999999999988776654555676766665543346 79999999999997654433221 1122345433 2
Q ss_pred eeEecC------ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccC
Q 024595 83 SFILDA------EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSA 156 (265)
Q Consensus 83 ~y~~~~------~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~ 156 (265)
+|.+.. ++++||+||+..+............. ......+.++|++||++.|++++++++|+++|+|++..
T Consensus 117 ~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~----~~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~ 192 (313)
T 1ute_A 117 YYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE----RPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSI 192 (313)
T ss_dssp SEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCC----SCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCC
T ss_pred ceEEEEecCCCCceEEEEEEEChHHhCcCccccccccC----CccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccC
Confidence 333333 48999999998764321100000000 01134567899999999999988899999999999887
Q ss_pred CCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-eCCeEEEEeCCCCCCCCCCCC--CCCCccceeeec----CCC
Q 024595 157 GHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWRGDRN--WWSPEELKLYYD----GQG 229 (265)
Q Consensus 157 ~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~~~~~~~~~~--~~~~~~~~~~~~----~~g 229 (265)
..++......+.+.+++++++|+++|+||+|...... .+++.++++|+++...+.... ........|... ..|
T Consensus 193 ~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (313)
T 1ute_A 193 AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGG 272 (313)
T ss_dssp SSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCE
T ss_pred CCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCc
Confidence 6655555667889999999999999999999988776 589999999998865432110 111122334332 379
Q ss_pred eEEEEEeCCeEEEEEEecCCCeEEEEEccCCCcc
Q 024595 230 FMSVKMTRSEAVVLFYDVHGNILHKWSIPKEPLK 263 (265)
Q Consensus 230 y~~~~v~~~~i~~~~~~~~g~~~~~~~i~~~~~~ 263 (265)
|.+++++++++++++++.+|+++++++|+|+..+
T Consensus 273 y~~l~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~ 306 (313)
T 1ute_A 273 FAYVEITPKEMSVTYIEASGKSLFKTKLPRRARS 306 (313)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEECCCC--
T ss_pred eEEEEEEcCEEEEEEEcCCCcEEEEEEeccccCc
Confidence 9999999999999999999999999999998543
No 3
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.97 E-value=1.4e-30 Score=227.58 Aligned_cols=232 Identities=13% Similarity=0.129 Sum_probs=156.6
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCcee-------
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLC------- 80 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~------- 80 (265)
.+|||||++||++|.++.....+.+|.. |...+......+|+++++||||+..+........+.....+|.+
T Consensus 153 ~~~D~vl~~GD~~y~~~~~~~~~~~~~~-~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~ 231 (426)
T 1xzw_A 153 AKGQAVLFMGDLSYSNRWPNHDNNRWDT-WGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGS 231 (426)
T ss_dssp TCCSEEEECSCCCCGGGSGGGCTHHHHH-HHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTC
T ss_pred CCCCEEEeCCChhhcccCCcccchHHHH-HHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCC
Confidence 3899999999999876643222233332 22222111236899999999998753210000000000011111
Q ss_pred --eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc---CCCCeEEEEecccccc
Q 024595 81 --SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN---SKAKWKIVVGHHTIKS 155 (265)
Q Consensus 81 --~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~---~~~~~~iv~~H~P~~~ 155 (265)
+.+|+++.++++||+||+..... ...+|++||++.|++ ++.+|+||++|+|++.
T Consensus 232 ~~~~~ys~~~g~~~~i~Ldt~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~ 290 (426)
T 1xzw_A 232 GDPLWYAIKRASAHIIVLSSYSGFV---------------------KYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYN 290 (426)
T ss_dssp SSTTSEEEEETTEEEEECCTTSCCS---------------------TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSC
T ss_pred CCCCeEEEEECCEEEEEeeCcccCC---------------------CCHHHHHHHHHHHHhhhhcCCCEEEEEeccCcee
Confidence 23577888889999999864210 124899999999998 3567999999999987
Q ss_pred CCC--CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-------------------eCCeEEEEeCCCCCCCCC--C
Q 024595 156 AGH--HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-------------------SNGIEFLTSGGGSKAWRG--D 212 (265)
Q Consensus 156 ~~~--~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-------------------~~~~~~i~~g~~~~~~~~--~ 212 (265)
... .+....+++.|.+++.+++|++||+||+|.+++.. ..++.||++|+||..... .
T Consensus 291 ~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~ 370 (426)
T 1xzw_A 291 SYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASE 370 (426)
T ss_dssp CBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCC
T ss_pred CCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccc
Confidence 542 23334567889999999999999999999998764 257889999998865422 1
Q ss_pred CCCCCCccceeeecCCCeEEEEEeCC-eEEEEEE-ecCCC--eEEEEEccCCC
Q 024595 213 RNWWSPEELKLYYDGQGFMSVKMTRS-EAVVLFY-DVHGN--ILHKWSIPKEP 261 (265)
Q Consensus 213 ~~~~~~~~~~~~~~~~gy~~~~v~~~-~i~~~~~-~~~g~--~~~~~~i~~~~ 261 (265)
.....+....+....+||.++++.++ .+.++++ +.+|+ ++++++|.|+-
T Consensus 371 ~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 371 MTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp BCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred cCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 11112233455567899999999654 7999998 47888 79999999873
No 4
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.96 E-value=6.8e-29 Score=216.80 Aligned_cols=230 Identities=14% Similarity=0.159 Sum_probs=152.9
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcc-ccccccccccCCCce--------
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVE-AQLSPVLTRKDSRWL-------- 79 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~-~~~~~~~~~~~~~~~-------- 79 (265)
+|||||++||++|..+....++.+|.. |...+......+|+++++||||+..... ..... +.....+|.
T Consensus 147 ~~D~vl~~GDl~y~~~~~~~~~~~~~~-~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~-~~~~~~~f~~P~~~~~~ 224 (424)
T 2qfp_A 147 KGQTVLFVGDLSYADRYPNHDNVRWDT-WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEP-FKPFSYRYHVPYEASQS 224 (424)
T ss_dssp CCCEEEECSCCSCGGGSGGGCTHHHHH-HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCST-THHHHHHCCCCGGGGTC
T ss_pred CCCEEEEcCccccccccccccchHHHH-HHHHHHHHHhcCCeEeecCCcccccCCccccccc-chhhhhhccCCccccCC
Confidence 899999999999876543222233322 2222211112589999999999864211 00000 000000111
Q ss_pred -eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC---CCCeEEEEecccccc
Q 024595 80 -CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS---KAKWKIVVGHHTIKS 155 (265)
Q Consensus 80 -~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~ 155 (265)
.+.+|+++.++++||+||+.... + ...+|++||++.|++. +.+|+||++|+|++.
T Consensus 225 ~~~~~ys~~~g~~~~i~Ldt~~~~---------------~------~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~ 283 (424)
T 2qfp_A 225 TSPFWYSIKRASAHIIVLSSYSAY---------------G------RGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYN 283 (424)
T ss_dssp SSTTSEEEEETTEEEEECCTTSCC---------------S------TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSC
T ss_pred CCCcEEEEEECCEEEEEecCCccC---------------C------CcHHHHHHHHHHHhhhcccCCCEEEEEeCcCcee
Confidence 12356788789999999996410 0 1137999999999984 356999999999987
Q ss_pred CCC-C-CChHHHHHHHHHHHHhCCccEEEeCCcccceEEee-------------------CCeEEEEeCCCCCCCCCC--
Q 024595 156 AGH-H-GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS-------------------NGIEFLTSGGGSKAWRGD-- 212 (265)
Q Consensus 156 ~~~-~-~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~-------------------~~~~~i~~g~~~~~~~~~-- 212 (265)
... + .....+++.|.+++.+++|+++|+||+|.+++... .++.||++|+||......
T Consensus 284 ~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~ 363 (424)
T 2qfp_A 284 SYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSN 363 (424)
T ss_dssp CBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCC
T ss_pred cCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCcc
Confidence 532 1 22345678899999999999999999999877632 357899999988764321
Q ss_pred CCCCCCccceeeecCCCeEEEEEeC-CeEEEEEEe-cCCCeE--EEEEccCCC
Q 024595 213 RNWWSPEELKLYYDGQGFMSVKMTR-SEAVVLFYD-VHGNIL--HKWSIPKEP 261 (265)
Q Consensus 213 ~~~~~~~~~~~~~~~~gy~~~~v~~-~~i~~~~~~-~~g~~~--~~~~i~~~~ 261 (265)
.....+....+....+||.++++.+ ..+.++++. .+|+++ ++++|.|+.
T Consensus 364 ~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~ 416 (424)
T 2qfp_A 364 MIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 416 (424)
T ss_dssp BCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred CCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence 1111123344555789999999954 479999985 789975 999999884
No 5
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=99.93 E-value=1e-24 Score=194.16 Aligned_cols=239 Identities=14% Similarity=0.149 Sum_probs=147.8
Q ss_pred ccCCCEEEecCCccCCCCCCCC----------------CChhhhhhcccccCCCCC-----CCceEEcCCCcccCCCccc
Q 024595 7 KLEIDFVISTGDNFYEDGLTGE----------------EDPAFLDSFTSIYTAPSL-----QKQWYNVLGNHDYRGDVEA 65 (265)
Q Consensus 7 ~~~pd~vv~~GD~~~~~g~~~~----------------~~~~~~~~~~~~~~~~~l-----~~p~~~i~GNHD~~~~~~~ 65 (265)
+.+|||||++||++|+++.... ...+++..|...+..+.+ .+||++++||||+.++...
T Consensus 140 ~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~ 219 (527)
T 2yeq_A 140 KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYAN 219 (527)
T ss_dssp TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBT
T ss_pred hcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCC
Confidence 3699999999999998864321 012333444333322222 4899999999999866322
Q ss_pred ccc------------------ccccccC------CC-ceeeeeeEecCce-EEEEEEeCccccccccCCCCCCCCCccc-
Q 024595 66 QLS------------------PVLTRKD------SR-WLCSRSFILDAEI-AEFVFVDTTPFVDEYFEDPGDSTYDWRG- 118 (265)
Q Consensus 66 ~~~------------------~~~~~~~------~~-~~~~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~~~~~~- 118 (265)
... .++..+. +. -....+|+|.+++ ++||+|||+.+........ .....+..
T Consensus 220 ~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~-~~~~~~~~~ 298 (527)
T 2yeq_A 220 KIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANND-GNKPPSDES 298 (527)
T ss_dssp TBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGS-SEECCCHHH
T ss_pred CcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccc-ccccccccc
Confidence 100 0000000 00 0011346788788 9999999998653210000 00000000
Q ss_pred -cchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCC-C-----------ChHHHHHHHHHHHHhCCc--cEEEe
Q 024595 119 -VYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHH-G-----------VTKELLLRLLPILEENNV--DMYVN 183 (265)
Q Consensus 119 -~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~-~-----------~~~~~~~~l~~~~~~~~v--~~vl~ 183 (265)
...+..++++|++||++.|++++++|+||++|+|++....+ + .....+++|+++|.+++| .+||+
T Consensus 299 ~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLs 378 (527)
T 2yeq_A 299 RNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLT 378 (527)
T ss_dssp HCTTCCSSCHHHHHHHHHHHHHCCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHhcCCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEE
Confidence 01123467899999999999999999999999999865321 1 113457899999999988 49999
Q ss_pred CCcccceEEee-------C----CeEEEEeCCCCCCCCCCCCC----C--CCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595 184 GHDHCLQHISS-------N----GIEFLTSGGGSKAWRGDRNW----W--SPEELKLYYDGQGFMSVKMTRSEAVVLFYD 246 (265)
Q Consensus 184 GH~H~~~~~~~-------~----~~~~i~~g~~~~~~~~~~~~----~--~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~ 246 (265)
||.|.+..... . ++.|++++..+......... + ..+..+|.....||++|+|++++++++++.
T Consensus 379 GDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~~~~ 458 (527)
T 2yeq_A 379 GDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGYVRCTVTPHQWKADYRV 458 (527)
T ss_dssp CSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCEEEEEEEEETTEEEEEEEE
T ss_pred cchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCCCEEEEEEeccEEEEEEEE
Confidence 99999987643 1 35566554433322111000 0 112346666789999999999999999986
No 6
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.92 E-value=2.9e-24 Score=176.63 Aligned_cols=210 Identities=17% Similarity=0.138 Sum_probs=137.1
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEecC
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILDA 88 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 88 (265)
+||+||++||+++ .+. ..++. .+..++ ..+++|+++++||||........+...+....... .+..|.+..
T Consensus 41 ~~d~vi~~GDl~~-~~~----~~~~~-~~~~~l--~~l~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 111 (274)
T 3d03_A 41 RPDAVVVSGDIVN-CGR----PEEYQ-VARQIL--GSLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDA-NNMRCAVDD 111 (274)
T ss_dssp CCSEEEEESCCBS-SCC----HHHHH-HHHHHH--TTCSSCEEEECCTTSCHHHHHHHHGGGSGGGCSCG-GGCCEEECS
T ss_pred CCCEEEECCCCCC-CCC----HHHHH-HHHHHH--HhcCCCEEEECCCCCCHHHHHHHhhhhhcCcccCC-CceEEEEEe
Confidence 6899999999994 331 12222 222222 23578999999999985432211111000000000 113467788
Q ss_pred ceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCCh---HHH
Q 024595 89 EIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVT---KEL 165 (265)
Q Consensus 89 ~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~---~~~ 165 (265)
++++|++||+...... ...+.++|++||++.|++.+.+++|+++|+|++........ ...
T Consensus 112 ~~~~~i~ld~~~~~~~-----------------~~~~~~~~~~wl~~~l~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~ 174 (274)
T 3d03_A 112 FATRLLFIDSSRAGTS-----------------KGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACEN 174 (274)
T ss_dssp SSSEEEECCCCCTTCS-----------------SBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTGGGSBTT
T ss_pred CCEEEEEEeCCCCCCC-----------------CCeeCHHHHHHHHHHHHhCCCCCEEEEECCCCcccCCcccCcccCcC
Confidence 8999999999764210 11245689999999999876788999999999865422111 012
Q ss_pred HHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEE
Q 024595 166 LLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLF 244 (265)
Q Consensus 166 ~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~ 244 (265)
.+.+.++++++ +++++|+||+|........++.++++++.+....... ......+.....||.+++++++++++++
T Consensus 175 ~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~---~~~~~~~~~~~~gy~i~~i~~~~~~~~~ 251 (274)
T 3d03_A 175 GHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCH---ADTDPYYDLSPASCLMHRQVGEQWVSYQ 251 (274)
T ss_dssp THHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCS---SCCSCEEBCCCCEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCC---CccccccccCCCceEEEEEeCCcEEEEE
Confidence 35678899988 8999999999999887778888877776655432111 0111123345789999999999999998
Q ss_pred Eec
Q 024595 245 YDV 247 (265)
Q Consensus 245 ~~~ 247 (265)
+..
T Consensus 252 ~~~ 254 (274)
T 3d03_A 252 HSL 254 (274)
T ss_dssp EEC
T ss_pred Eec
Confidence 875
No 7
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.91 E-value=8.1e-25 Score=184.75 Aligned_cols=211 Identities=16% Similarity=0.086 Sum_probs=139.4
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCceeeeeeEec
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRWLCSRSFILD 87 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 87 (265)
.+||+||++||+++ .|... .-..+.+.++.+. ..+++|+++++||||+.......+. .. .....+.+|.+.
T Consensus 65 ~~~d~vi~~GDl~~-~~~~~-~~~~~~~~l~~l~--~~~~~pv~~v~GNHD~~~~~~~~~~----~~-~~~~~~~~~~~~ 135 (330)
T 3ib7_A 65 LRPDAIVFTGDLAD-KGEPA-AYRKLRGLVEPFA--AQLGAELVWVMGNHDDRAELRKFLL----DE-APSMAPLDRVCM 135 (330)
T ss_dssp CCCSEEEECSCCBT-TCCHH-HHHHHHHHHHHHH--HHHTCEEEECCCTTSCHHHHHHHHH----CC-CCCCSCCCEEEE
T ss_pred CCCCEEEECCCCCC-CCCHH-HHHHHHHHHHHHH--hhcCCCEEEeCCCCCCHHHHHHHhc----cc-ccccCCcceEEE
Confidence 68999999999994 33110 0011222222211 1247899999999997542221111 00 001122446677
Q ss_pred CceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC---hHH
Q 024595 88 AEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV---TKE 164 (265)
Q Consensus 88 ~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~---~~~ 164 (265)
.++++|++||+..... . ...+.++|++||++.|+....+.+|+++|||++....... ...
T Consensus 136 ~~~~~~i~lds~~~~~---------~--------~~~~~~~q~~wl~~~l~~~~~~~~iv~~Hh~p~~~~~~~~~~~~~~ 198 (330)
T 3ib7_A 136 IDGLRIIVLDTSVPGH---------H--------HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELR 198 (330)
T ss_dssp ETTEEEEECCCCCTTC---------C--------SBCCCHHHHHHHHHHTTSCCTTCEEEECSSCSSCCSSGGGGGGSBS
T ss_pred eCCEEEEEecCCCCCC---------C--------CCccCHHHHHHHHHHHHhcccCCeEEEEECCCCCCCcccccccccc
Confidence 7899999999986311 0 1123568999999999997777789999999876532111 011
Q ss_pred HHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEE
Q 024595 165 LLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLF 244 (265)
Q Consensus 165 ~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~ 244 (265)
..+.+..++++++++++++||+|.......+++.++++|+.+....... ............||.+++++++.+++++
T Consensus 199 ~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~---~~g~~~~~~~~~gy~iv~i~~~~~~~~~ 275 (330)
T 3ib7_A 199 DQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTV---AAGGTRGRDGAQGCNLVHVYPDTVVHSV 275 (330)
T ss_dssp CHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTS---CTTCCCEESCSCEEEEEEECSSCEEEEE
T ss_pred CHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCC---CCcceeccCCCCceEEEEEECCCeEEEE
Confidence 2467888999999999999999999988889999999988876542211 0111122234678999999999999999
Q ss_pred Eec
Q 024595 245 YDV 247 (265)
Q Consensus 245 ~~~ 247 (265)
+..
T Consensus 276 v~~ 278 (330)
T 3ib7_A 276 IPL 278 (330)
T ss_dssp EEC
T ss_pred ecc
Confidence 874
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.90 E-value=4.5e-24 Score=179.18 Aligned_cols=223 Identities=15% Similarity=0.140 Sum_probs=132.9
Q ss_pred ccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccccccccc-------CCC-c
Q 024595 7 KLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRK-------DSR-W 78 (265)
Q Consensus 7 ~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~-------~~~-~ 78 (265)
+.+||+||++||+++..........+..+.+...+ ..+++|+++++||||........+...+... ... +
T Consensus 49 ~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l--~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (322)
T 2nxf_A 49 RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL--DACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDL 126 (322)
T ss_dssp HTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH--HTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEEC
T ss_pred hcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH--HhcCCcEEEecCCCCcccCCHHHHhhhhCCccccccccccccc
Confidence 36899999999999422100000011111122222 2357899999999998421111110001100 000 0
Q ss_pred --eeeeeeEecC-ceEEEEEEeCccccccccCC----------------CC---CCCCC-cccc-----chhhhhHHHHH
Q 024595 79 --LCSRSFILDA-EIAEFVFVDTTPFVDEYFED----------------PG---DSTYD-WRGV-----YRRKEYLSDLL 130 (265)
Q Consensus 79 --~~~~~y~~~~-~~~~~i~lds~~~~~~~~~~----------------~~---~~~~~-~~~~-----~~~~~~~~~Q~ 130 (265)
..+.+|.+.. ++++||+||+..+....... +. ..... ..|. .....+.++|+
T Consensus 127 ~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~ 206 (322)
T 2nxf_A 127 IGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQL 206 (322)
T ss_dssp GGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHH
T ss_pred CCCCceEEEEecCCCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHH
Confidence 0123466775 78999999997642100000 00 00000 0000 00123457999
Q ss_pred HHHHHHhhcCC--CCeEEEEeccccccCCCCCC-hHHHHHHHHHHHHhC-CccEEEeCCcccceEEe-eCCeEEEEeCCC
Q 024595 131 KDVDGALKNSK--AKWKIVVGHHTIKSAGHHGV-TKELLLRLLPILEEN-NVDMYVNGHDHCLQHIS-SNGIEFLTSGGG 205 (265)
Q Consensus 131 ~wl~~~l~~~~--~~~~iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~ 205 (265)
+||++.|+..+ .+++||++|+|+++...... .....+.+.++++++ +|+++|+||+|...... ..++.++++|+.
T Consensus 207 ~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 207 QWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGV 286 (322)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCG
T ss_pred HHHHHHHHHHHhcCCcEEEEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecch
Confidence 99999998854 67889999999986543110 000246788899998 79999999999999887 789999987766
Q ss_pred CCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595 206 SKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD 246 (265)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~ 246 (265)
... . ....+|.++++++++++++.+.
T Consensus 287 ~~~---~------------~~~~~y~~v~~~~~~~~~~~~~ 312 (322)
T 2nxf_A 287 IET---P------------PHSHAFATAYLYEDRMVMKGRG 312 (322)
T ss_dssp GGC---C------------TTSCEEEEEEECSSEEEEEEEE
T ss_pred hhC---C------------CCCCcEEEEEEECCeEEEEecc
Confidence 221 0 1357999999999999998875
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.81 E-value=1.5e-19 Score=158.58 Aligned_cols=210 Identities=16% Similarity=0.168 Sum_probs=122.6
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccc---------------
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSP--------------- 69 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~--------------- 69 (265)
+++.+||+||++||+++ .|... ....+.+.+..+ ...++|+++++||||+.......+..
T Consensus 88 ~~~~~~d~vi~~GDl~~-~~~~~-~~~~~~~~l~~l---~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (443)
T 2xmo_A 88 VESKKTDVLIISGDLTN-NGEKT-SHEELAKKLTQV---EKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFS 162 (443)
T ss_dssp HHHHTCSEEEEESCCBS-SCCHH-HHHHHHHHHHHH---HHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHH
T ss_pred HHHcCCCEEEECCCCCC-CCCHH-HHHHHHHHHHHH---HhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHH
Confidence 34568999999999994 33110 001111122221 12378999999999986532211100
Q ss_pred -cccccC-CCce----eeeeeE-ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcC--
Q 024595 70 -VLTRKD-SRWL----CSRSFI-LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNS-- 140 (265)
Q Consensus 70 -~~~~~~-~~~~----~~~~y~-~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~-- 140 (265)
.+.... .... .+..|. +..++++|++||+..+.......+ .+ ....+.++|++||++.|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~-----~~----~~g~~~~~ql~wL~~~L~~~~~ 233 (443)
T 2xmo_A 163 KIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGN-----PT----TEGGLTAGTLDWIKESSALAKK 233 (443)
T ss_dssp HHTCCCCCTTCSEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTS-----CC----CCBCCCHHHHHHHHHHHHHHHH
T ss_pred HHhhhcChhhhhccCCCCceEEEecCCCEEEEEeeCCCcCcccccCC-----CC----cCCccCHHHHHHHHHHHHHHHH
Confidence 000000 0000 012343 346889999999987532110000 00 01224569999999999874
Q ss_pred CCCeEEEEeccccccCCCC---CChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CC--eEEEEeCCCCCCCCCC
Q 024595 141 KAKWKIVVGHHTIKSAGHH---GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NG--IEFLTSGGGSKAWRGD 212 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~---~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~--~~~i~~g~~~~~~~~~ 212 (265)
..+++|+++|||+...... .......+.+.+++++++|+++|+||+|....... ++ +..+.+|+.+.
T Consensus 234 ~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~----- 308 (443)
T 2xmo_A 234 NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV----- 308 (443)
T ss_dssp TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-----
T ss_pred cCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-----
Confidence 3567899999999764321 11112246788899999999999999999886543 33 33333332211
Q ss_pred CCCCCCccceeeecCCCeEEEEEeCCe--EEEEEEe
Q 024595 213 RNWWSPEELKLYYDGQGFMSVKMTRSE--AVVLFYD 246 (265)
Q Consensus 213 ~~~~~~~~~~~~~~~~gy~~~~v~~~~--i~~~~~~ 246 (265)
...+|.+++++++. ++++.+.
T Consensus 309 -------------~p~~y~il~i~~~~~~~~~~~~~ 331 (443)
T 2xmo_A 309 -------------FPHKYGNITYSAKNKNFTYQSQK 331 (443)
T ss_dssp -------------TTCEEEEEEEETTTTEEEEEEEE
T ss_pred -------------CCCCeEEEEEeCCCceEEEEEEE
Confidence 23589999999876 6776664
No 10
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.65 E-value=1.1e-16 Score=135.38 Aligned_cols=221 Identities=17% Similarity=0.141 Sum_probs=113.0
Q ss_pred cccccCCCEEEecCC-ccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCccccccccccccCCCc-ee
Q 024595 4 IGEKLEIDFVISTGD-NFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLTRKDSRW-LC 80 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD-~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~~~~-~~ 80 (265)
.+++++||+||++|| ++ +.+..+... ..+.+.+..+. .. +|+++|+||||... ...... .+...+... ..
T Consensus 56 ~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~---~~-~pv~~i~GNHD~~~-~~~~~~-~l~~~g~nv~v~ 128 (336)
T 2q8u_A 56 EAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMM---RT-APVVVLPGNHDWKG-LKLFGN-FVTSISSDITFV 128 (336)
T ss_dssp HHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHH---HH-SCEEECCC-------CHHHHH-HHHHHCSSEEEC
T ss_pred HHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHH---hc-CCEEEECCCCCccc-cccHHH-HHHhcCCEEEEE
Confidence 455679999999999 66 444322110 11222233221 12 79999999999865 221111 111111000 00
Q ss_pred e-----eeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhc---CCCCeEEEEeccc
Q 024595 81 S-----RSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKN---SKAKWKIVVGHHT 152 (265)
Q Consensus 81 ~-----~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~---~~~~~~iv~~H~P 152 (265)
. ....+..+++.+++++...... .... .....++|+.|+.+.+.. ....++|+++|.|
T Consensus 129 ~~~~~~~~~~~~~~~v~i~glp~~~~~~----------~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~ 194 (336)
T 2q8u_A 129 MSFEPVDVEAKRGQKVRILPFPYPDESE----------ALRK----NEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFT 194 (336)
T ss_dssp CSSSCEEEECTTSCEEEEEEECCC-----------------C----CSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESE
T ss_pred ecccccCceEEeCCCEEEEECCCCCHHH----------HHHH----hhHHHHHHHHHHHHHHHHhccCCCCCEEEEECcc
Confidence 0 0122344678888886432100 0000 011235778888887764 3567899999999
Q ss_pred cccCCCCCChHHHH-HHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeE
Q 024595 153 IKSAGHHGVTKELL-LRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFM 231 (265)
Q Consensus 153 ~~~~~~~~~~~~~~-~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~ 231 (265)
+............. ..+...+.+.+++++++||+|..+..... ...+.+|+......+.. ....||.
T Consensus 195 ~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~~-~~i~y~GS~~~~s~~e~-----------~~~~~~~ 262 (336)
T 2q8u_A 195 VEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQ-PLTIYPGSLIRIDFGEE-----------ADEKGAV 262 (336)
T ss_dssp ETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEEET-TEEEECCCSSCCSGGGT-----------TCCCEEE
T ss_pred ccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeCCC-ccEEECCCCcCCCcccc-----------CCCCEEE
Confidence 87532110000000 00111233458999999999999876543 33444443321111000 1257999
Q ss_pred EEEEeCC-eEEEEEEecCCCeEEEEEc
Q 024595 232 SVKMTRS-EAVVLFYDVHGNILHKWSI 257 (265)
Q Consensus 232 ~~~v~~~-~i~~~~~~~~g~~~~~~~i 257 (265)
+++++++ .++++++....+++.++.+
T Consensus 263 lv~i~~~~~~~v~~i~~~~r~~~~~~~ 289 (336)
T 2q8u_A 263 FVELKRGEPPRYERIDASPLPLKTLYY 289 (336)
T ss_dssp EEEEETTSCCEEEEEECCCCCEEEEEE
T ss_pred EEEEeCCCccEEEEEECCCEEEEEeec
Confidence 9999976 5889999876688888665
No 11
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.63 E-value=5.7e-16 Score=123.45 Aligned_cols=193 Identities=11% Similarity=-0.062 Sum_probs=102.0
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccccccc--cc--CCCcee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLSPVLT--RK--DSRWLC 80 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~~~~~--~~--~~~~~~ 80 (265)
+++.+||+||++||++. .+.. ...+.+.++.+ ..+++|+++|+||||.... ..+...+. .. ......
T Consensus 28 ~~~~~~D~vi~~GDl~~-~~~~---~~~~~~~~~~l---~~~~~pv~~v~GNHD~~~~--~~~~~~~~~~~~~~~~~~l~ 98 (228)
T 1uf3_A 28 APDTGADAIALIGNLMP-KAAK---SRDYAAFFRIL---SEAHLPTAYVPGPQDAPIW--EYLREAANVELVHPEMRNVH 98 (228)
T ss_dssp HHHHTCSEEEEESCSSC-TTCC---HHHHHHHHHHH---GGGCSCEEEECCTTSCSHH--HHHHHHHHHHHHCTTEEECB
T ss_pred HhhcCCCEEEECCCCCC-CCCC---HHHHHHHHHHH---HhcCCcEEEECCCCCchhH--HHHHhhhhhhccCcceEEcc
Confidence 34458999999999993 3311 12222222222 1356899999999998542 11110000 00 000111
Q ss_pred eeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCC-C
Q 024595 81 SRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGH-H 159 (265)
Q Consensus 81 ~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~-~ 159 (265)
...+.+. ++++++.+++.... .+.. .... ...... -+..|+++.|++....+.|+++|+|++.... .
T Consensus 99 ~~~~~~~-~~~~i~g~~~~~~~-~~~~----~~~~---~~~~~~---~~~~~~~~~l~~~~~~~~il~~H~p~~~~~~~~ 166 (228)
T 1uf3_A 99 ETFTFWR-GPYLVAGVGGEIAD-EGEP----EEHE---ALRYPA---WVAEYRLKALWELKDYPKIFLFHTMPYHKGLNE 166 (228)
T ss_dssp TSEEEET-TTEEEEEECSEEES-SSCC----BSSS---SCEEEH---HHHHHHHGGGGGSCSCCEEEEESSCBCBTTTBT
T ss_pred cceEeeC-CCcEEecCCCCcCC-CCcc----Chhh---cccchh---hhHHHHHHHHHhCCCCCeEEEEccCcccCCccc
Confidence 1122232 37888888754311 0000 0000 000001 1234445555555456889999999876411 1
Q ss_pred CChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCe
Q 024595 160 GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE 239 (265)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~ 239 (265)
.. ...+..++++++++++++||+| ......+++.++..|+.+ ..+|.++++++
T Consensus 167 ~~----~~~~~~~~~~~~~~~~~~GH~H-~~~~~~~~~~~in~Gs~~--------------------~~~~~i~~~~~-- 219 (228)
T 1uf3_A 167 QG----SHEVAHLIKTHNPLLVLVAGKG-QKHEMLGASWVVVPGDLS--------------------EGEYSLLDLRA-- 219 (228)
T ss_dssp TS----BHHHHHHHHHHCCSEEEECCSS-CEEEEETTEEEEECCBGG--------------------GTEEEEEETTT--
T ss_pred cC----HHHHHHHHHHhCCCEEEEcccc-cCccccCCceEEEecccC--------------------CCceEEEEecc--
Confidence 11 1345667777899999999999 444444677666554332 34788999876
Q ss_pred EEEEEE
Q 024595 240 AVVLFY 245 (265)
Q Consensus 240 i~~~~~ 245 (265)
++++++
T Consensus 220 ~~~~~~ 225 (228)
T 1uf3_A 220 RKLETG 225 (228)
T ss_dssp TEEEEE
T ss_pred eEeeec
Confidence 455544
No 12
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.59 E-value=3.6e-15 Score=121.40 Aligned_cols=163 Identities=10% Similarity=-0.013 Sum_probs=85.6
Q ss_pred CCCceEEcCCCcccCCCccccccccccccC--CCce-eeeeeEecCceEEEEEEeCccccccccCCCCCCCCCccccchh
Q 024595 46 LQKQWYNVLGNHDYRGDVEAQLSPVLTRKD--SRWL-CSRSFILDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRR 122 (265)
Q Consensus 46 l~~p~~~i~GNHD~~~~~~~~~~~~~~~~~--~~~~-~~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
+++|+++|+||||..... .+...+.... +... ......+..++++|++++.......+. ... ....
T Consensus 88 ~~~pv~~v~GNHD~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~------~~~---~~~~ 156 (260)
T 2yvt_A 88 LGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFE------EDF---VLKY 156 (260)
T ss_dssp TCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCB------SSS---SCEE
T ss_pred cCCcEEEEcCCCCchhhh--hHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcC------HHH---Hhhc
Confidence 468999999999975421 0000011100 0011 111122444678999988643211000 000 0000
Q ss_pred hhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCC--CC--CChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeE
Q 024595 123 KEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAG--HH--GVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIE 198 (265)
Q Consensus 123 ~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~--~~--~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~ 198 (265)
..+ ....|| +.+.+......|+++|+|++... .. .....-...+..++++++++++++||+| ......+++.
T Consensus 157 ~~~--~~~~~l-~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~ 232 (260)
T 2yvt_A 157 PRW--YVEYIL-KFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTI 232 (260)
T ss_dssp EHH--HHHHHG-GGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEE
T ss_pred chh--hHHHHH-HHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEE
Confidence 011 112455 44554445677999999986431 10 0000001345667777899999999999 5444446666
Q ss_pred EEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEE
Q 024595 199 FLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVL 243 (265)
Q Consensus 199 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~ 243 (265)
++..|+.+ ..+|.+++++++++++.
T Consensus 233 ~in~Gs~~--------------------~g~~~ii~~~~~~~~~~ 257 (260)
T 2yvt_A 233 VVNPGEFE--------------------EGRYAFLDLTQHKIKLE 257 (260)
T ss_dssp EEECCBGG--------------------GTEEEEEETTTTEEEEE
T ss_pred EEeCCCCC--------------------CCceEEEEEcCCEEEee
Confidence 66544332 12788999988877664
No 13
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.55 E-value=4.9e-14 Score=121.21 Aligned_cols=212 Identities=20% Similarity=0.173 Sum_probs=110.5
Q ss_pred ccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCcccccc-ccccccCCCceeee
Q 024595 5 GEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDVEAQLS-PVLTRKDSRWLCSR 82 (265)
Q Consensus 5 ~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (265)
+.+.+||+||++||++. .+...... ..+.+.+..+ ...++|+++|+||||.......... ..+... -..+.+.
T Consensus 56 ~~~~~~D~VliaGDl~d-~~~p~~~~~~~~~~~l~~L---~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~-v~~l~~~ 130 (386)
T 3av0_A 56 ILEIKPDVVLHSGDLFN-DLRPPVKALRIAMQAFKKL---HENNIKVYIVAGNHEMPRRLGEESPLALLKDY-VKILDGK 130 (386)
T ss_dssp HHTTCCSEEEECSCSBS-SSSCCHHHHHHHHHHHHHH---HHTTCEEEECCCGGGSCSSTTSCCGGGGGTTT-CEECSEE
T ss_pred HHHcCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHHH---HhcCCcEEEEcCCCCCCccccccCHHHHHHHH-eEEcCCC
Confidence 44679999999999983 33221000 0112222221 1136899999999998653221100 011111 0011111
Q ss_pred eeE-ecCceEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCC
Q 024595 83 SFI-LDAEIAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGV 161 (265)
Q Consensus 83 ~y~-~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~ 161 (265)
.+. .+.+++.+++++..... . ... ..+++.|+...+. ...++|+++|+|+.+... +.
T Consensus 131 ~v~~~~~~~v~i~gl~~~~~~------------~------~~~-~~~~l~~l~~~~~--~~~~~Ill~H~~~~~~~~-~~ 188 (386)
T 3av0_A 131 DVINVNGEEIFICGTYYHKKS------------K------REE-MLDKLKNFESEAK--NYKKKILMLHQGINPYIP-LD 188 (386)
T ss_dssp EEEEETTEEEEEEEECCCCST------------T------HHH-HHHHHHHHHHHHH--TCSSEEEEECCCCTTTSS-SS
T ss_pred cEEEeCCCCEEEEeCCCCCHH------------H------HHH-HHHHHHHhhhhcc--cCCCEEEEECcCccccCC-CC
Confidence 122 33356777777654210 0 011 1244555554433 356789999999754211 11
Q ss_pred hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeC---C
Q 024595 162 TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTR---S 238 (265)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~---~ 238 (265)
. .. .+ ..+. +++++++||+|........+..++.+|+......... ..+.....||.++++++ +
T Consensus 189 ~-~~--~~-~~l~--~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~~~~e~-------~~~~~~~kg~~lv~i~~~~~~ 255 (386)
T 3av0_A 189 Y-EL--EH-FDLP--KFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEY-------EDYKKEGKGFYLVDFSGNDLD 255 (386)
T ss_dssp C-SS--CG-GGSC--CCSEEEECSCCSCEEEECSSSEEEECCCSSCCSGGGT-------HHHHHHCSEEEEEECCSSSCC
T ss_pred c-cc--CH-HHhh--hCCeEEccCCCCCccccCCCceEEECCcccccCcchh-------ccccCCCCEEEEEEEecCcCC
Confidence 0 00 00 0121 3899999999998654446666666665532211100 00011357999999987 6
Q ss_pred eEEEEEEecCCCeEEEEE
Q 024595 239 EAVVLFYDVHGNILHKWS 256 (265)
Q Consensus 239 ~i~~~~~~~~g~~~~~~~ 256 (265)
.++++++....++.-++.
T Consensus 256 ~~~v~~i~l~~r~~~~~~ 273 (386)
T 3av0_A 256 ISDIEKIDIECREFVEVN 273 (386)
T ss_dssp GGGEEEEECCCCCEEEEE
T ss_pred CceEEEEECCcceeEEEe
Confidence 678888887666653433
No 14
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.54 E-value=3.9e-13 Score=104.47 Aligned_cols=100 Identities=18% Similarity=0.273 Sum_probs=68.6
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL 223 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 223 (265)
++|+++|.+++... .. .+.+..++++.+++++++||+|.......+++.++..|+.+......-
T Consensus 90 ~~i~l~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~---------- 153 (192)
T 1z2w_A 90 FKIGLIHGHQVIPW--GD----MASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALE---------- 153 (192)
T ss_dssp EEEEEECSCCCCBT--TC----HHHHHHHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSC----------
T ss_pred EEEEEECCCcCCCC--CC----HHHHHHHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCC----------
Confidence 46888885544321 11 234555666678999999999999877778999999888765431100
Q ss_pred eecCCCeEEEEEeCCeEEEEEEecCCCe--EEEEEccC
Q 024595 224 YYDGQGFMSVKMTRSEAVVLFYDVHGNI--LHKWSIPK 259 (265)
Q Consensus 224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~--~~~~~i~~ 259 (265)
.....+|+++++++++++++++..++.. +.+.+++|
T Consensus 154 ~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 154 TNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp SCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 0135799999999999999999865544 44555544
No 15
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.51 E-value=2.1e-14 Score=123.20 Aligned_cols=221 Identities=16% Similarity=0.152 Sum_probs=112.5
Q ss_pred cccccCCCEEEecCCccCCCCCCCCCC-hhhhhhcccccCCCCCCCceEEcCCCcccCCCc-cccccccccccCCCce-e
Q 024595 4 IGEKLEIDFVISTGDNFYEDGLTGEED-PAFLDSFTSIYTAPSLQKQWYNVLGNHDYRGDV-EAQLSPVLTRKDSRWL-C 80 (265)
Q Consensus 4 ~~~~~~pd~vv~~GD~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~~~~-~~~~~~~~~~~~~~~~-~ 80 (265)
.+.+.+||+||++||++++.+..+... ..+.+.+..+ ... +|+++|+||||..+.. .......+... .... .
T Consensus 38 ~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l---~~~-~~v~~i~GNHD~~~~~~~~~~~~~~~~~-~~~~~~ 112 (379)
T 3tho_B 38 EAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRM---MRT-APVVVLPGNQDWKGLKLFGNFVTSISSD-ITFVMS 112 (379)
T ss_dssp HHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHH---HHH-SCEEECCCTTSCTTHHHHHHHHHTTCSS-EEECCS
T ss_pred HHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHH---HhC-CCEEEEcCCCccccCccccccccccCCc-ceeecc
Confidence 345679999999999984333221110 1122222222 123 8999999999965410 00000000000 0000 0
Q ss_pred eeeeEec--Cc-eEEEEEEeCccccccccCCCCCCCCCccccchhhhhHHHHHHHHHHHhh----c--CCCCeEEEEecc
Q 024595 81 SRSFILD--AE-IAEFVFVDTTPFVDEYFEDPGDSTYDWRGVYRRKEYLSDLLKDVDGALK----N--SKAKWKIVVGHH 151 (265)
Q Consensus 81 ~~~y~~~--~~-~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~wl~~~l~----~--~~~~~~iv~~H~ 151 (265)
+..+.+. .+ .+.++.+.-... ... ...+..++..|+.+.+. . ....+.|+++|.
T Consensus 113 ~~~v~l~~~~G~~v~i~glp~~~~------------~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~ 175 (379)
T 3tho_B 113 FEPVDVEAKRGQKVRILPFPYPDE------------SEA-----LRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHF 175 (379)
T ss_dssp SCCEEEECTTCCEEEEEEECCCCC------------C---------CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEES
T ss_pred cceEEEEcCCCCEEEEEECCCCCH------------HHH-----hhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEec
Confidence 1112221 22 466655532210 000 01134567888888876 2 256788999999
Q ss_pred ccccCCC-CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCe
Q 024595 152 TIKSAGH-HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGF 230 (265)
Q Consensus 152 P~~~~~~-~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy 230 (265)
++..... .+........+...+...++++|++||+|..+...... ..+.+|+..... . .+ .....||
T Consensus 176 ~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~~~~-~i~y~GS~~~~~---f-----~E---~~~~k~~ 243 (379)
T 3tho_B 176 TVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQP-LTIYPGSLIRID---F-----GE---EADEKGA 243 (379)
T ss_dssp CBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEEEETT-EEEECCCSSCCS---G-----GG---SSSCCEE
T ss_pred cccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEeCCCC-cEEecCCCCCCC---c-----cc---ccCCCEE
Confidence 8864322 11100000011111223579999999999997654422 222233221110 0 00 0135799
Q ss_pred EEEEEeCC-eEEEEEEecCCCeEEEEEcc
Q 024595 231 MSVKMTRS-EAVVLFYDVHGNILHKWSIP 258 (265)
Q Consensus 231 ~~~~v~~~-~i~~~~~~~~g~~~~~~~i~ 258 (265)
.+++++++ ..+++++......+.+++.+
T Consensus 244 ~lv~~~~~~~~~v~~i~~~~r~~~~~~~~ 272 (379)
T 3tho_B 244 VFVELKRGEPPRYERIDASPLPLKTLYYK 272 (379)
T ss_dssp EEEECCSSSCCEEEEEECCCCCEEEEECS
T ss_pred EEEEEcCCCcceEEEeCCCCeeeEEEEcC
Confidence 99999865 57888888667888888765
No 16
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.49 E-value=2.8e-12 Score=101.34 Aligned_cols=93 Identities=23% Similarity=0.275 Sum_probs=65.3
Q ss_pred CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccce
Q 024595 143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELK 222 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~ 222 (265)
..+|+++|.+++... .. .+.+..++++.+++++++||+|.......+++.++..|+.+......- .
T Consensus 113 ~~~i~l~Hg~~~~~~--~~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~-----~--- 178 (215)
T 2a22_A 113 EFKIGLMHGNQVLPW--DD----PGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALT-----P--- 178 (215)
T ss_dssp TEEEEEECSTTSSST--TC----HHHHHHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTS-----T---
T ss_pred CeEEEEEcCCccCCC--CC----HHHHHHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCC-----C---
Confidence 457889996554321 11 234555666678999999999999877778999999888765432100 0
Q ss_pred eeecCCCeEEEEEeCCeEEEEEEecCCCe
Q 024595 223 LYYDGQGFMSVKMTRSEAVVLFYDVHGNI 251 (265)
Q Consensus 223 ~~~~~~gy~~~~v~~~~i~~~~~~~~g~~ 251 (265)
....+|+++++++++++++++..++..
T Consensus 179 --~~~~~y~il~i~~~~i~~~~~~~~~~~ 205 (215)
T 2a22_A 179 --DAPPSFMLMALQGNKVVLYVYDLRDGK 205 (215)
T ss_dssp --TCCCEEEEEEEETTEEEEEEEEEETTE
T ss_pred --CCCCcEEEEEEeCCcEEEEEEEecCCe
Confidence 135699999999999999999865443
No 17
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.49 E-value=4.4e-13 Score=102.70 Aligned_cols=94 Identities=19% Similarity=0.144 Sum_probs=71.4
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL 223 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 223 (265)
.+|+++|+|++.... . .+.+..++++.+++++++||+|.......+++.++..|+.+.+...
T Consensus 78 ~~i~~~Hg~~~~~~~--~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~------------ 139 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF--N----FQKLDYWAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGT------------ 139 (176)
T ss_dssp EEEEEECSGGGTTTT--C----SHHHHHHHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTT------------
T ss_pred eEEEEECCCccCCCC--C----HHHHHHHHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcCCCC------------
Confidence 478899998764321 1 1345566777899999999999998877789999988877644211
Q ss_pred eecCCCeEEEEEeCCeEEEEEEecCCCeEEEEE
Q 024595 224 YYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWS 256 (265)
Q Consensus 224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~ 256 (265)
....+|+++++++++++++++..+|+++.+++
T Consensus 140 -~~~~~y~il~~~~~~~~v~~~~~~~~~~~~~~ 171 (176)
T 3ck2_A 140 -IRECLYARVEIDDSYFKVDFLTRDHEVYPGLS 171 (176)
T ss_dssp -CCSCCEEEEEECSSEEEEEEECTTSCBCTTCC
T ss_pred -CCCCeEEEEEEcCCEEEEEEEEECCEEcchhh
Confidence 11369999999999999999999998877544
No 18
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.46 E-value=3.9e-14 Score=114.78 Aligned_cols=111 Identities=5% Similarity=-0.123 Sum_probs=73.5
Q ss_pred hhhHHHHHHHHHHHhhcCC---CCeEEEEecccccc-CCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCe
Q 024595 123 KEYLSDLLKDVDGALKNSK---AKWKIVVGHHTIKS-AGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGI 197 (265)
Q Consensus 123 ~~~~~~Q~~wl~~~l~~~~---~~~~iv~~H~P~~~-~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~ 197 (265)
..+.++|++||++...... ...+|+++|+++.. ...........+.+..+++++ +++++++||+|.......+++
T Consensus 108 ~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~ 187 (252)
T 1nnw_A 108 EKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYG 187 (252)
T ss_dssp HHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTE
T ss_pred HHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHHHHHHHhcCCCCCEEEECCccccceEecCCe
Confidence 4567889999987433211 34578899988742 211100011124567778777 899999999999988777899
Q ss_pred EEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEEe
Q 024595 198 EFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFYD 246 (265)
Q Consensus 198 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~ 246 (265)
.++..|+.+.+..+ ....+|+++++++.++++..+.
T Consensus 188 ~~in~Gs~~~~~~~-------------~~~~~y~il~~~~~~v~~~~v~ 223 (252)
T 1nnw_A 188 RVVCPGSVGFPPGK-------------EHKATFALVDVDTLKPKFIEVE 223 (252)
T ss_dssp EEEEECCSSSCSSS-------------SCCEEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCccCCCCC-------------CCcceEEEEECCCCeEEEEEeC
Confidence 99998887654211 0245889999987666665553
No 19
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.36 E-value=7.9e-12 Score=96.79 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=54.0
Q ss_pred CeEEEEeccccccCCCCCChHHHHHHHHHHHHhC-CccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCccc
Q 024595 143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEEN-NVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEEL 221 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~ 221 (265)
..+|+++|.|+.. +...+.+. +++++++||+|.......+++.++..|+.+. . ..
T Consensus 115 ~~~ill~Hg~~~~-------------l~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r-~~--------- 170 (190)
T 1s3l_A 115 DLKFFITHGHHQS-------------VLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-Y-LT--------- 170 (190)
T ss_dssp TEEEEEEESCCHH-------------HHHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-T-TT---------
T ss_pred CcEEEEECCChHH-------------HHHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-c-CC---------
Confidence 4679999998653 23344444 8999999999999987778999999888764 2 11
Q ss_pred eeeecCCCeEEEEEeCCeEEE
Q 024595 222 KLYYDGQGFMSVKMTRSEAVV 242 (265)
Q Consensus 222 ~~~~~~~gy~~~~v~~~~i~~ 242 (265)
...+|++++++++++++
T Consensus 171 ----~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 171 ----GIPTIGILDTEKKEYRE 187 (190)
T ss_dssp ----SCCEEEEEETTTTEEEE
T ss_pred ----CCCEEEEEEcCCCcEEE
Confidence 24689999998876655
No 20
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.35 E-value=1.7e-12 Score=104.80 Aligned_cols=106 Identities=11% Similarity=0.063 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe----------
Q 024595 124 EYLSDLLKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---------- 193 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---------- 193 (265)
.+.+++++||++....... ..++++|.++.......... ...+..++++.+++++|+||+|......
T Consensus 92 ~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~~~~~~~~~--~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~ 168 (246)
T 3rqz_A 92 QLQAEHLQYLESLPNRMID-GDWTVVHGSPRHPIWEYIYN--ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAP 168 (246)
T ss_dssp HCCHHHHHHHHHCCSEEEE-TTEEEESSCSSSTTTCCCCS--HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCC
T ss_pred HcCHHHHHHHHhCCcEEEE-CCEEEEECCcCCccccccCC--hHHHHHHHhccCCCEEEECCcCcccEEEeccccccccc
Confidence 4557889999975433211 25788998776543211111 2456678888899999999999887554
Q ss_pred -----------eCCeEEEEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCeEEEEEE
Q 024595 194 -----------SNGIEFLTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSEAVVLFY 245 (265)
Q Consensus 194 -----------~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~i~~~~~ 245 (265)
..+..+++.|+.|.+..+. ...+|++++.+..++++..+
T Consensus 169 ~~~~~~~~~~l~~g~~ivNpGSVG~Prdg~-------------p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 169 HHPNDGEVLDVSSGRYIINPGAVGQPRDGD-------------PRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp BCCCTTCEEECSSSCEEEEECCSSCCCSSC-------------CSEEEEEEEGGGTEEEEEEE
T ss_pred ccccccceeecCCCeEEEECCccCCCCCcC-------------CcceEEEEECCCCEEEEEEe
Confidence 2357788888887654221 23489999998777766554
No 21
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.33 E-value=1.2e-12 Score=107.07 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHhhcC---CCCeEEEEeccccccCCCCC-ChHHHHHHHHHHHHhCCccEEEeCCcccceEEe-eCCeEE
Q 024595 125 YLSDLLKDVDGALKNS---KAKWKIVVGHHTIKSAGHHG-VTKELLLRLLPILEENNVDMYVNGHDHCLQHIS-SNGIEF 199 (265)
Q Consensus 125 ~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~~~~~~-~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~-~~~~~~ 199 (265)
+.+++++||++..... -....|+++|.++....... ......+.+..++++.+++++++||+|...... .++..+
T Consensus 108 L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~~~~~~~ 187 (270)
T 3qfm_A 108 ISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLI 187 (270)
T ss_dssp SCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEECTTSCEE
T ss_pred cCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCCEEEECCcCchHheeccCCEEE
Confidence 4568899998654331 13457788887665431111 111112445666767789999999999887766 478999
Q ss_pred EEeCCCCCCCCCCCCCCCCccceeeecCCCeEEEEEeCCe-EEEEEEe
Q 024595 200 LTSGGGSKAWRGDRNWWSPEELKLYYDGQGFMSVKMTRSE-AVVLFYD 246 (265)
Q Consensus 200 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~v~~~~-i~~~~~~ 246 (265)
++.|+.|.+..+... . . ......|++++++++. ++++++.
T Consensus 188 iNpGSvg~pr~~~~~---~---~-~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 188 VNPGSIGQPFFLDAQ---L---R-KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp EEECCSSSCCCSSTT---G---G-GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred EECCCccCCCCCCcc---c---c-CCCCCEEEEEEecCCCceEEEEEE
Confidence 999999876432110 0 0 0124589999999875 5777764
No 22
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.32 E-value=9.3e-12 Score=102.11 Aligned_cols=73 Identities=10% Similarity=0.005 Sum_probs=48.8
Q ss_pred hcCCCCeEEEEeccccccCCCCC---ChHHHHHHHHHHH-HhCCccEEEeCCcccceEEe-eCCeEEEEeCCCCCCCC
Q 024595 138 KNSKAKWKIVVGHHTIKSAGHHG---VTKELLLRLLPIL-EENNVDMYVNGHDHCLQHIS-SNGIEFLTSGGGSKAWR 210 (265)
Q Consensus 138 ~~~~~~~~iv~~H~P~~~~~~~~---~~~~~~~~l~~~~-~~~~v~~vl~GH~H~~~~~~-~~~~~~i~~g~~~~~~~ 210 (265)
..-.....|+++|.|++...... ....-.+.+...+ ++.+++++++||+|...... .+++.+++.|+.+....
T Consensus 203 ~~ip~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~~ 280 (296)
T 3rl5_A 203 NLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQ 280 (296)
T ss_dssp TTSCTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTSC
T ss_pred hhCCCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCcC
Confidence 33344567999999998753210 0000014456666 57899999999999986544 47888998888876543
No 23
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.28 E-value=1.5e-11 Score=103.58 Aligned_cols=106 Identities=18% Similarity=0.159 Sum_probs=56.3
Q ss_pred CeEEEEeccccccCCC----CCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCC---C
Q 024595 143 KWKIVVGHHTIKSAGH----HGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRN---W 215 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~----~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~---~ 215 (265)
..+|+++|.|+..... .+.... +..+. .++++|++||+|..+.....+...+.+|+......+... +
T Consensus 166 ~~~Ill~H~~~~~~~~~~~~~~~~~~----~~~l~--~~~dyvalGH~H~~q~~~~~~~~i~ypGS~~~~~~~E~~~~~~ 239 (333)
T 1ii7_A 166 DNAILMLHQGVREVSEARGEDYFEIG----LGDLP--EGYLYYALGHIHKRYETSYSGSPVVYPGSLERWDFGDYEVRYE 239 (333)
T ss_dssp SSEEEEEECCBHHHHHTTTCCCCSBC----GGGSC--TTCSEEEEESCSSCEEEEETTEEEEECCCSSCCSGGGCSEEEE
T ss_pred CCeEEEEcCChhhcccccccccceec----HHHCC--ccCCEEEccccccceecCCCCceEEEcCCCeecccchhccccc
Confidence 3589999998743210 010000 01111 368999999999999765556666665555322111110 0
Q ss_pred CCCcc-ceeeecCCCeEEEEEeCCeEEEEEEecCCCeEEEEEcc
Q 024595 216 WSPEE-LKLYYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSIP 258 (265)
Q Consensus 216 ~~~~~-~~~~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i~ 258 (265)
+.... ........||.+++ ..+++++...-.++.+++|.
T Consensus 240 ~~G~~~~p~~~~~kg~~lv~----~~~~~~i~l~~r~~~~~~i~ 279 (333)
T 1ii7_A 240 WDGIKFKERYGVNKGFYIVE----DFKPRFVEIKVRPFIDVKIK 279 (333)
T ss_dssp ECSSSEEEEECCCCEEEEEE----TTEEEEEECCCCCEEEEEEE
T ss_pred cccccccccccCCCeEEEEe----cCceeEEECCCCceEEEEec
Confidence 00000 00012367999998 25677777555777666554
No 24
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.28 E-value=6.4e-11 Score=102.09 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=59.5
Q ss_pred CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----CCeEEEEeCCCCCCCCCCCCCCCC
Q 024595 143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----NGIEFLTSGGGSKAWRGDRNWWSP 218 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----~~~~~i~~g~~~~~~~~~~~~~~~ 218 (265)
.+.|+++|......+...... + -+...++++|+.||+|..+.... .++..+..|+..... + ..
T Consensus 230 ~~~Ilv~H~~~~~~g~~~~ip---~----~l~~~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s---~---~e 296 (431)
T 3t1i_A 230 WFNLFVIHQNRSKHGSTNFIP---E----QFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTS---L---SP 296 (431)
T ss_dssp EEEEEEECSCCSCSSSSSSCC---G----GGSCTTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCS---C---CH
T ss_pred ceEEEEECCCccCCCccccCC---H----hHhhCCCCEEEecccccccccccccCCCCEEEEeCCCCcccC---c---Cc
Confidence 478999999764322111100 1 12345789999999999987542 345555544433211 0 00
Q ss_pred ccceeeecCCCeEEEEEeCCeEEEEEEecC-CCeEEEEEc
Q 024595 219 EELKLYYDGQGFMSVKMTRSEAVVLFYDVH-GNILHKWSI 257 (265)
Q Consensus 219 ~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~-g~~~~~~~i 257 (265)
-.....||.+++++++.++++++... -+++...+|
T Consensus 297 ----~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v 332 (431)
T 3t1i_A 297 ----GEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDI 332 (431)
T ss_dssp ----HHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEE
T ss_pred ----ccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEE
Confidence 00246799999999999999999865 465554444
No 25
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.28 E-value=1.1e-10 Score=100.19 Aligned_cols=96 Identities=10% Similarity=0.056 Sum_probs=60.3
Q ss_pred CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe----eCCeEEEEeCCCCCCCCCCCCCC
Q 024595 141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS----SNGIEFLTSGGGSKAWRGDRNWW 216 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~----~~~~~~i~~g~~~~~~~~~~~~~ 216 (265)
...+.|+++|.+...........+ -+...++++|++||+|..+... ..++..+..|+..... .
T Consensus 209 ~~~~nIlvlH~~~~~~~~~~yip~-------~l~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s---~--- 275 (417)
T 4fbw_A 209 DEWFNLLTVHQNHSAHTPTSYLPE-------SFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATS---L--- 275 (417)
T ss_dssp TTSEEEEEEESCSSCSSSSSSCCG-------GGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSS---C---
T ss_pred CCceEEEEecCCccCCCCcccCch-------hHhhcCCCEEEecCccccceeccccCCCCEEEEECCCCCcCC---C---
Confidence 345789999997754322111111 1444689999999999998764 2455665555443211 0
Q ss_pred CCccceeeecCCCeEEEEEeCCeEEEEEEecCC-CeEE
Q 024595 217 SPEELKLYYDGQGFMSVKMTRSEAVVLFYDVHG-NILH 253 (265)
Q Consensus 217 ~~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~g-~~~~ 253 (265)
... .....||.+++++++.++++.+.... ++..
T Consensus 276 ~e~----E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~ 309 (417)
T 4fbw_A 276 SPG----ETAPKHCGILNITGKDFHLEKIRLRTVRPFI 309 (417)
T ss_dssp CHH----HHSCCEEEEEEEETTEEEEEEEECSSSCCEE
T ss_pred ccc----cCCCCEEEEEEEECCEEEEEEEECCCcccEE
Confidence 000 01467999999999999999988554 5443
No 26
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.27 E-value=1.1e-10 Score=100.95 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=61.9
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee----CCeEEEEeCCCCCCCCCCCCCCC
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS----NGIEFLTSGGGSKAWRGDRNWWS 217 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~----~~~~~i~~g~~~~~~~~~~~~~~ 217 (265)
..+.|+++|.+...........+ -+...++++|+.||+|..+.... .++..+..|+...... .
T Consensus 273 ~~~nIlvlH~~~~~~~~~~yipe-------~ll~~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~--~---- 339 (472)
T 4fbk_A 273 EWFNLLTVHQNHSAHTPTSYLPE-------SFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSL--S---- 339 (472)
T ss_dssp GEEEEEEEESCSCCSSTTSSCCG-------GGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSC--C----
T ss_pred CceEEEEecCCccCCCccccCCh-------hhhhcCCCEEEecCcccceeeecccCCCCeEEEECCCcccccc--C----
Confidence 34689999998764432111111 13345799999999999987642 4555555554322110 0
Q ss_pred CccceeeecCCCeEEEEEeCCeEEEEEEecCC-CeEEEEEcc
Q 024595 218 PEELKLYYDGQGFMSVKMTRSEAVVLFYDVHG-NILHKWSIP 258 (265)
Q Consensus 218 ~~~~~~~~~~~gy~~~~v~~~~i~~~~~~~~g-~~~~~~~i~ 258 (265)
.. .....||.+++++++.++++++.... +++...+|.
T Consensus 340 e~----E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~ 377 (472)
T 4fbk_A 340 PG----ETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDII 377 (472)
T ss_dssp GG----GCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEE
T ss_pred cc----CCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEE
Confidence 00 01367999999999999999998554 655555543
No 27
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.19 E-value=5e-10 Score=85.64 Aligned_cols=75 Identities=19% Similarity=0.256 Sum_probs=52.6
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL 223 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 223 (265)
.+|+++|.... .......+...+. .+++++++||+|.......+++.++..|+.+.
T Consensus 103 ~~i~l~HG~~~-------~~~~~~~~~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~---------------- 158 (178)
T 2kkn_A 103 VTIGMCHGWGA-------PWDLKDRLLKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE---------------- 158 (178)
T ss_dssp EEEEECCSCCC-------HHHHHHHHHHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT----------------
T ss_pred EEEEEECCCCC-------CCCHHHHHHHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC----------------
Confidence 46778886432 1122233334444 67899999999999877678888887665442
Q ss_pred eecCCCeEEEEEeCCeEEEEEEe
Q 024595 224 YYDGQGFMSVKMTRSEAVVLFYD 246 (265)
Q Consensus 224 ~~~~~gy~~~~v~~~~i~~~~~~ 246 (265)
.+|+++++++++++++++.
T Consensus 159 ----~sy~il~~~~~~~~~~~~~ 177 (178)
T 2kkn_A 159 ----GSYAVLELDGGEVRFELKT 177 (178)
T ss_dssp ----TEEEEEEEETTEEEEEEEE
T ss_pred ----CeEEEEEECCCEEEEEEEe
Confidence 5899999999999988864
No 28
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.08 E-value=8.9e-10 Score=85.55 Aligned_cols=62 Identities=18% Similarity=0.164 Sum_probs=43.2
Q ss_pred CeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeC-----CeEEEEeCCC
Q 024595 143 KWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSN-----GIEFLTSGGG 205 (265)
Q Consensus 143 ~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~-----~~~~i~~g~~ 205 (265)
..+|+++|+|+......... ...+.+..++++++++++++||+|........ ++.++.+|+.
T Consensus 106 ~~~i~~~H~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~~ 172 (195)
T 1xm7_A 106 GKRILLSHYPAKDPITERYP-DRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANVE 172 (195)
T ss_dssp TEEEEEESSCSSCSSCCSCH-HHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBGG
T ss_pred CcEEEEEccCCcCCCccccc-chHHHHHHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeEe
Confidence 45799999998765322221 22467888888889999999999998765443 6777766543
No 29
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.07 E-value=5.1e-09 Score=82.11 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=58.5
Q ss_pred eEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCCCCCCCCCCCCCCcccee
Q 024595 144 WKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGSKAWRGDRNWWSPEELKL 223 (265)
Q Consensus 144 ~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 223 (265)
.+|+++|.+++....- .. + ...+++++||+|.......+++.++..|+.+.+..+
T Consensus 123 ~~i~l~Hg~~~~~~~l----------~~-~--~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~pr~~------------ 177 (208)
T 1su1_A 123 QRLFLTHGHLFGPENL----------PA-L--NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGG------------ 177 (208)
T ss_dssp CEEEEECSSSSBTTBC----------CC-C--CTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCTT------------
T ss_pred cEEEEECCCCCCcchh----------hh-h--cCCCEEEECCcccCccEEeCCEEEEECCCCcCCCCC------------
Confidence 4788999887643210 00 1 134899999999998777788889888877643210
Q ss_pred eecCCCeEEEEEeCCeEEEEEEecCCCeEEEEEc
Q 024595 224 YYDGQGFMSVKMTRSEAVVLFYDVHGNILHKWSI 257 (265)
Q Consensus 224 ~~~~~gy~~~~v~~~~i~~~~~~~~g~~~~~~~i 257 (265)
...+|++++. + ++++++.+|+++.++++
T Consensus 178 --~~~sy~il~~--~--~~~~~~~~~~~~~~~~~ 205 (208)
T 1su1_A 178 --NPASYGMLDN--D--VLSVIALNDQSIIAQVA 205 (208)
T ss_dssp --CCCEEEEEET--T--EEEEEETTTCCEEEEEE
T ss_pred --CCCEEEEEEC--C--eEEEEEeCCCEEEEEec
Confidence 2358889884 3 57778889999998887
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.57 E-value=6.4e-07 Score=79.73 Aligned_cols=52 Identities=21% Similarity=0.238 Sum_probs=31.3
Q ss_pred CCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEE
Q 024595 141 KAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHI 192 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~ 192 (265)
+...+|+++|.|.......+........+...+...+|+++|+||+|.....
T Consensus 183 ~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~~ 234 (516)
T 1hp1_A 183 KPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCM 234 (516)
T ss_dssp CCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCE
T ss_pred CCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCCccccc
Confidence 5678999999997543322211010122333333345999999999987643
No 31
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.32 E-value=9.3e-07 Score=69.74 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHHHhhcC---CCCeEEEEeccccccCC----CCCChHHH---HHHHHHHHH-----hCCccEEEeCCcc
Q 024595 123 KEYLSDLLKDVDGALKNS---KAKWKIVVGHHTIKSAG----HHGVTKEL---LLRLLPILE-----ENNVDMYVNGHDH 187 (265)
Q Consensus 123 ~~~~~~Q~~wl~~~l~~~---~~~~~iv~~H~P~~~~~----~~~~~~~~---~~~l~~~~~-----~~~v~~vl~GH~H 187 (265)
..+.+++++||+...... -...+++++|..+.+.. ........ +..+...++ ..++++|++||+|
T Consensus 109 ~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~vv~GHth 188 (221)
T 1g5b_A 109 EILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNRERISNSQNGIVKEIKGADTFIFGHTP 188 (221)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHHHCCHHHHHHHTTCCCCCBTSSEEEECSSC
T ss_pred HHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccccCchhhhhhccccCCcccCCCEEEECCCC
Confidence 345567778876542221 12357888997543221 11111111 123333344 3467899999999
Q ss_pred cceEEeeCCeEEEEeCCC
Q 024595 188 CLQHISSNGIEFLTSGGG 205 (265)
Q Consensus 188 ~~~~~~~~~~~~i~~g~~ 205 (265)
.......+++.++.+|+.
T Consensus 189 ~~~~~~~~~~~~in~Gs~ 206 (221)
T 1g5b_A 189 AVKPLKFANQMYIDTGAV 206 (221)
T ss_dssp CSSCEEETTEEECCCCHH
T ss_pred CccceeeCCEEEEECCCC
Confidence 987766788878766654
No 32
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.13 E-value=5e-06 Score=74.57 Aligned_cols=56 Identities=14% Similarity=0.284 Sum_probs=34.5
Q ss_pred HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceEE--eeCCeEEEEeCC
Q 024595 136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQHI--SSNGIEFLTSGG 204 (265)
Q Consensus 136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~~--~~~~~~~i~~g~ 204 (265)
.|++.....+|+++|.|... + ..+.++ .+|+++|+||+|..... ..+++..+.+|+
T Consensus 249 ~l~~~~~d~iIvLsH~g~~~--------d-----~~la~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~ 307 (562)
T 2wdc_A 249 KARAEGANAVVLLSHNGMQL--------D-----AALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSA 307 (562)
T ss_dssp HHHHTTCSEEEEEECSCHHH--------H-----HHHHTTSSSCCEEEECSSCCCCSSCEEETTEEEEECCS
T ss_pred HHHHCCCCEEEEEeCCCCcc--------h-----HHHHhcCCCCcEEEeCCCCCCCccCEEECCEEEEecCc
Confidence 34444567889999997521 1 123444 48999999999987532 125555544443
No 33
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.07 E-value=4.4e-06 Score=74.91 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=32.1
Q ss_pred HHHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceE
Q 024595 130 LKDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQH 191 (265)
Q Consensus 130 ~~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~ 191 (265)
++...+.|++.....+|+++|.|... + ..+.++ .+|+++|+||+|....
T Consensus 195 ~~~~v~~l~~~~~d~iIvL~H~g~~~--------d-----~~la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 195 AQKAVYELLAKGVNKIVVLSHLGYGE--------D-----LKLARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHHHHHHHHHTTCCCEEEEEESCHHH--------H-----HHHHTTCSSCCEEEECSSCCCBS
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCcch--------H-----HHHHHhCCCccEEEeCCcCcccc
Confidence 44444445544567889999997531 1 123333 5799999999998764
No 34
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=97.97 E-value=1.2e-05 Score=71.61 Aligned_cols=64 Identities=17% Similarity=0.281 Sum_probs=38.2
Q ss_pred CCCeEEEEeccccccCCCCCC-------hHHHHHHHHHHHHhCCccEEEeCCcccceEEeeCCeEEEEeCCCC
Q 024595 141 KAKWKIVVGHHTIKSAGHHGV-------TKELLLRLLPILEENNVDMYVNGHDHCLQHISSNGIEFLTSGGGS 206 (265)
Q Consensus 141 ~~~~~iv~~H~P~~~~~~~~~-------~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~i~~g~~~ 206 (265)
+...+|+++|.+.......+. ... ...+..-+ ..+|+++|+||+|.......+++..+.+|+-+
T Consensus 198 ~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDlIlgGHtH~~~~~~v~~~~ivqag~~g 268 (527)
T 3qfk_A 198 HADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDIFITGHQHRQIAERFKQTAVIQPGTRG 268 (527)
T ss_dssp HCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSEEECCSSCCEEEEEETTEEEEEECSTT
T ss_pred CCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcEEEECCCCcccceEECCEEEeccChhh
Confidence 356788999987643321110 000 11222222 14799999999999886555777777666544
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.94 E-value=1.8e-05 Score=70.24 Aligned_cols=65 Identities=14% Similarity=0.200 Sum_probs=32.9
Q ss_pred HHhhcCCCCeEEEEeccccccCCCCCChHHH---HHHHHHHHHh-CCccEEEeCCcccceEE--eeCCeEEE
Q 024595 135 GALKNSKAKWKIVVGHHTIKSAGHHGVTKEL---LLRLLPILEE-NNVDMYVNGHDHCLQHI--SSNGIEFL 200 (265)
Q Consensus 135 ~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~---~~~l~~~~~~-~~v~~vl~GH~H~~~~~--~~~~~~~i 200 (265)
+.|++. ...+|+++|.+...........+. .+.-..+.++ .+|+++|+||+|..... ..+++..+
T Consensus 180 ~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~~~iv 250 (509)
T 3ive_A 180 DELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLIL 250 (509)
T ss_dssp HHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSSCCEEEEESSCCCCSSCEEETTEEEE
T ss_pred HHHHhc-CCEEEEEeccCcCCccccccccccccccchHHHHHhcCCCCcEEEeCCcCccCCCCeeeCCEEEE
Confidence 344433 667889999875322111100000 0111233444 37999999999975422 23555443
No 36
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=97.55 E-value=5.3e-05 Score=67.79 Aligned_cols=41 Identities=27% Similarity=0.417 Sum_probs=26.9
Q ss_pred hhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 137 LKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 137 l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
|++.....+|+++|.+... + .. +.++ .+|+++|+||+|...
T Consensus 204 l~~~g~D~iI~l~H~g~~~--------d--~~---la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 204 LKTLNVNKIIALGHSGFEM--------D--KL---IAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp HHHTTCCCEEEEEESCHHH--------H--HH---HHHHSTTCCEEECCSSCCCC
T ss_pred HHhcCCCEEEEEeccCccc--------h--HH---HHHhCCCCcEEEeCCcCccc
Confidence 3333467789999986421 1 12 2333 379999999999865
No 37
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.49 E-value=0.00055 Score=61.23 Aligned_cols=68 Identities=25% Similarity=0.256 Sum_probs=38.8
Q ss_pred HHHHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh--CCccE-EEeCCcccceEEee-CCeEEEEeCCC
Q 024595 131 KDVDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE--NNVDM-YVNGHDHCLQHISS-NGIEFLTSGGG 205 (265)
Q Consensus 131 ~wl~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~--~~v~~-vl~GH~H~~~~~~~-~~~~~i~~g~~ 205 (265)
+|+++.++ .+...+|+++|.+.... .. +. ......+.+ .++++ +|+||+|....... +++..+.+|.-
T Consensus 188 ~~v~~l~~-~~~D~IIvL~H~G~~~~---~d--~~-~~~~~~lA~~~~giDilIlgGHtH~~~~~~~~~~t~ivqaG~~ 259 (557)
T 3c9f_A 188 PWFQEALK-HEVDLIIIVGHTPISHN---WG--EF-YQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQSGRY 259 (557)
T ss_dssp HHHHHHTT-SCCSEEEEECSSCCCTT---TC--HH-HHHHHHHHHHCTTSEEEEEECSSCCEEEEEEETTEEEEEECST
T ss_pred HHHHHHHh-cCCCEEEEecccCcccc---Cc--cc-cHHHHHHHHhCCCCCEEEECCCCCCCCcceecCCeEeeeccch
Confidence 36665553 35678899999976310 11 11 222222333 47995 99999999854333 55655544433
No 38
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=97.46 E-value=0.00075 Score=60.76 Aligned_cols=43 Identities=28% Similarity=0.441 Sum_probs=27.6
Q ss_pred HhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccceE
Q 024595 136 ALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQH 191 (265)
Q Consensus 136 ~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~~ 191 (265)
.|++.....+|+++|.+... + . .+.++ .+|+++|+||+|....
T Consensus 189 ~lk~~g~d~iI~l~H~G~~~--------d--~---~la~~~~giDlIlgGHtH~~~~ 232 (579)
T 3ztv_A 189 ALKQQGINKIILLSHAGSEK--------N--I---EIAQKVNDIDVIVTGDSHYLYG 232 (579)
T ss_dssp HHHTTTCCCEEEEEETCHHH--------H--H---HHHHHCSSCCEEEECSSCCEEE
T ss_pred HHHhCCCCEEEEEeccCchh--------h--H---HHHHhCCCCCEEEeCCCCcccc
Confidence 34433456788999985321 1 1 22333 3799999999999773
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.23 E-value=0.0024 Score=51.74 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=34.8
Q ss_pred HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CCeEEEE
Q 024595 133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NGIEFLT 201 (265)
Q Consensus 133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~~~~i~ 201 (265)
+++.+++.+...+|+.+|. +...+ ...+...+ ..+|++|+.||+|....... +++.|++
T Consensus 141 a~~~v~~~~~diIIv~~H~--------g~t~E-k~~la~~~-dg~VD~VvGgHTHv~t~d~~il~~gt~~i~ 202 (281)
T 1t71_A 141 LKELILKRDCDLHIVDFHA--------ETTSE-KNAFCMAF-DGYVTTIFGTHTHVPSADLRITPKGSAYIT 202 (281)
T ss_dssp HHHHHTTCCCSEEEEEEEC--------SCHHH-HHHHHHHH-TTTSSEEEEESSSSCCTTCEECTTSCEEES
T ss_pred HHHHHhhcCCCEEEEEeCC--------CchHH-HHHHHHhC-CCCeEEEEeCCCCcCCCceEEecCCcEEEe
Confidence 3333333345678888996 22222 12233322 24699999999999765332 7787876
No 40
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=96.91 E-value=0.0021 Score=57.26 Aligned_cols=45 Identities=24% Similarity=0.332 Sum_probs=28.5
Q ss_pred HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
.-.+|++.....+|+++|.-+ ..+ ..+.++ .+|++++.||+|...
T Consensus 178 ~v~~Lr~~g~D~II~LsH~G~--------~~d-----~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 178 EVDKLKTLNVNKIIALGHSGF--------EMD-----KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp HHHHHHHTTCCCEEEEEESCH--------HHH-----HHHHHHSTTCCEEECCSSCCCB
T ss_pred HHhhhhhcCCCEEEEeccCCc--------hHH-----HHHHhcCCCCCeeccCCcccee
Confidence 334444445677899999732 111 123344 379999999999764
No 41
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=96.30 E-value=0.1 Score=41.43 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=31.5
Q ss_pred CCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEe---eCCeEEEEe
Q 024595 142 AKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHIS---SNGIEFLTS 202 (265)
Q Consensus 142 ~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~---~~~~~~i~~ 202 (265)
...+|+.+|. +...+ ...+...+ ..+|++|+.||+|...... .+++.|++.
T Consensus 137 ~d~IIv~~H~--------g~tse-k~~la~~~-dg~Vd~VvGgHTHv~t~d~~il~~gt~~itd 190 (252)
T 2z06_A 137 ADYVLVEVHA--------EATSE-KMALAHYL-DGRASAVLGTHTHVPTLDATRLPKGTLYQTD 190 (252)
T ss_dssp CSEEEEEEEC--------SCHHH-HHHHHHHH-BTTBSEEEEESSCSCBSCCEECTTSCEEESC
T ss_pred CCEEEEEeCC--------CcHHH-HHHHHHhC-CCCeEEEEcCCCCcCCCccEEcCCCcEeecC
Confidence 5678888997 22222 12222222 3469999999999976533 267777753
No 42
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=96.24 E-value=0.075 Score=42.36 Aligned_cols=60 Identities=20% Similarity=0.141 Sum_probs=35.3
Q ss_pred HHHHhhcCCCCeEEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccceEEee---CCeEEEEe
Q 024595 133 VDGALKNSKAKWKIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQHISS---NGIEFLTS 202 (265)
Q Consensus 133 l~~~l~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~~~~~---~~~~~i~~ 202 (265)
+++.+++.+...+|+.+|. +...+ ...+...+ ..+|++|+.||+|....... +++.|++.
T Consensus 131 ~~~~v~~l~~d~IIv~~H~--------e~t~E-k~~la~~~-dg~vd~VvGgHTHv~~~d~~il~~gt~~i~d 193 (255)
T 1t70_A 131 MDALLERDDLGTVFVDFHA--------EATSE-KEAMGWHL-AGRVAAVIGTHTHVPTADTRILKGGTAYQTD 193 (255)
T ss_dssp HHHHTTCSSCCEEEEEEEC--------SCHHH-HHHHHHHH-TTSSSEEEEESSCSCBSCCEEETTTEEEESC
T ss_pred HHHHHHHhCCCEEEEEeCC--------CChHH-HHHHHHhC-CCCeEEEEeCCCCcCCCceEEcCCCeEEEEc
Confidence 3333333345577888995 22222 12233222 34699999999999865433 78888764
No 43
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=95.43 E-value=0.003 Score=51.42 Aligned_cols=43 Identities=28% Similarity=0.271 Sum_probs=27.1
Q ss_pred cCCCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 8 LEIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
.++|.+|++||++ +.|.. ..+. +..+.. +..+++++.||||..
T Consensus 27 ~~~d~~v~lGD~v-drG~~---s~~~---l~~l~~---l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 27 PGKDTLWLTGDLV-ARGPG---SLDV---LRYVKS---LGDSVRLVLGNHDLH 69 (280)
T ss_dssp TTTCEEEECSCCS-SSSSC---HHHH---HHHHHH---TGGGEEECCCHHHHH
T ss_pred CCCCEEEEeCCcC-CCCCc---cHHH---HHHHHh---CCCceEEEECCCcHH
Confidence 4679999999999 34421 1222 222211 234899999999964
No 44
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=94.95 E-value=0.0049 Score=49.59 Aligned_cols=28 Identities=21% Similarity=-0.041 Sum_probs=19.9
Q ss_pred CccEEEeCCcccceEEeeC--CeEEEEeCC
Q 024595 177 NVDMYVNGHDHCLQHISSN--GIEFLTSGG 204 (265)
Q Consensus 177 ~v~~vl~GH~H~~~~~~~~--~~~~i~~g~ 204 (265)
+.+.|+.||+|.......+ ++..+-+|+
T Consensus 196 g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~ 225 (262)
T 2qjc_A 196 GPETVVFGHDARRGLQEQYKPLAIGLDSRC 225 (262)
T ss_dssp CSSEEEECCCGGGCCBCTTTTTEEECCCBG
T ss_pred CCCEEEECCCccccccccCCCCEEEeeCcc
Confidence 4689999999997654445 666665544
No 45
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=93.77 E-value=0.012 Score=49.36 Aligned_cols=24 Identities=33% Similarity=0.329 Sum_probs=19.0
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.+..++..++.+.++.||+|...
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 344566777789999999999875
No 46
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=93.63 E-value=0.27 Score=40.98 Aligned_cols=51 Identities=22% Similarity=0.415 Sum_probs=30.1
Q ss_pred HhhcCCCCeEEEEeccccccCCCC-CChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 136 ALKNSKAKWKIVVGHHTIKSAGHH-GVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 136 ~l~~~~~~~~iv~~H~P~~~~~~~-~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
+|++.....+|+++|......... .... ....+.++ .+|++++.||+|...
T Consensus 202 ~Lk~~g~D~II~l~H~G~~~d~~~~~~e~----~~~~lA~~v~giD~IigGHsH~~~ 254 (341)
T 3gve_A 202 KMKAEGADVIIALAHTGIEKQAQSSGAEN----AVFDLATKTKGIDAIISGHQHGLF 254 (341)
T ss_dssp HHHHTTCSEEEEEECCCCCSSCCCTTCSS----CHHHHHHHCSCCCEEEECSSCCEE
T ss_pred HHHhcCCCEEEEEeccCccccccccccch----hHHHHHhcCCCCcEEEECCCCccC
Confidence 344445678899999876432211 1111 11223333 479999999999875
No 47
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=91.55 E-value=0.042 Score=45.18 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=20.2
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEE
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHI 192 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~ 192 (265)
+.....++++++++++-||.-....+
T Consensus 223 ~~~~~fl~~n~l~~iir~Hq~~~~G~ 248 (309)
T 2ie4_C 223 DISETFNHANGLTLVSRAHQLVMEGY 248 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCTEEE
T ss_pred HHHHHHHHHcCCeEEEecCcceeCCE
Confidence 44567888899999999998765443
No 48
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=90.34 E-value=0.081 Score=43.89 Aligned_cols=22 Identities=14% Similarity=0.341 Sum_probs=16.9
Q ss_pred HHHHHHhCCccEEEeCCcccce
Q 024595 169 LLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 169 l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
...++++.++++++-||.-...
T Consensus 232 ~~~fl~~~~l~liir~Hq~v~~ 253 (330)
T 1fjm_A 232 VAKFLHKHDLDLICRAHQVVED 253 (330)
T ss_dssp HHHHHHHHTCSEEEECCSCCTT
T ss_pred HHHHHHhCCCceEecccccccC
Confidence 3456778899999999987654
No 49
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=89.44 E-value=0.086 Score=43.05 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=18.9
Q ss_pred HHHHHHHHhCCccEEEeCCcccc
Q 024595 167 LRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
+.....++++++++++-||.=..
T Consensus 229 ~~~~~fl~~n~l~~IiR~Hq~v~ 251 (299)
T 3e7a_A 229 EVVAKFLHKHDLDLICRAHQVVE 251 (299)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCT
T ss_pred HHHHHHHHHCCCeEEEEcCeeee
Confidence 55677888899999999999543
No 50
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=89.01 E-value=0.093 Score=45.86 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=22.2
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEEee
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHISS 194 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~~ 194 (265)
+....++++.++++++.||.+....+..
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~g~~~ 414 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAEGYEV 414 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTEEEEE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcCCeEE
Confidence 4456788889999999999998765543
No 51
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=88.41 E-value=0.11 Score=43.47 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCccEEEeCCcccc
Q 024595 167 LRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
+.....++++++++++-||.=..
T Consensus 250 ~~~~~Fl~~n~l~~IiRaHq~~~ 272 (357)
T 3ll8_A 250 PAVCEFLQHNNLLSILRAHEAQD 272 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCT
T ss_pred HHHHHHHHHCCCeEEEEeccccc
Confidence 45567889999999999998543
No 52
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=87.55 E-value=0.13 Score=42.68 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=21.1
Q ss_pred HHHHHHHHhCCccEEEeCCcccceEEe
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQHIS 193 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~~~~ 193 (265)
+.....++++++++++-||.=....+.
T Consensus 238 ~~~~~fl~~n~l~~IiR~Hq~~~~Gy~ 264 (335)
T 3icf_A 238 DITDRFLRNNKLRKIFRSHELRMGGVQ 264 (335)
T ss_dssp HHHHHHHHHTTCSEEEECSSCCTEEEE
T ss_pred HHHHHHHHHCCCeEEEEcCceecCeEE
Confidence 456778899999999999997654443
No 53
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=87.49 E-value=0.14 Score=42.10 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.....++++++++++-||.=...
T Consensus 234 ~~~~~fl~~n~l~~iiR~Hq~~~~ 257 (315)
T 3h63_A 234 DVTKAFLEENNLDYIIRSHEVKAE 257 (315)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCTT
T ss_pred HHHHHHHHHcCCcEEEEeceeecC
Confidence 455678888999999999996543
No 54
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=87.07 E-value=1.3 Score=36.69 Aligned_cols=50 Identities=20% Similarity=0.289 Sum_probs=29.3
Q ss_pred HhhcCCCCeEEEEeccccccCCCC-CChHHHHHHHHHHHHh-CCccEEEeCCcccce
Q 024595 136 ALKNSKAKWKIVVGHHTIKSAGHH-GVTKELLLRLLPILEE-NNVDMYVNGHDHCLQ 190 (265)
Q Consensus 136 ~l~~~~~~~~iv~~H~P~~~~~~~-~~~~~~~~~l~~~~~~-~~v~~vl~GH~H~~~ 190 (265)
+|++.....+|+++|.-+...... ..... . .++++ .+|++++.||+|...
T Consensus 196 ~lr~~g~D~II~l~H~G~~~d~~~~~~en~--~---~~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 196 EMRAKGADVVVVVAHSGLSADPYQAMAENS--V---YYLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp HHHHTTCSEEEEEECCCCCCSCCCTTCSCC--H---HHHTTSTTCCEEEECSSCSEE
T ss_pred HHHhcCCCEEEEEeccCccccccccccchh--H---HHHhhCCCCCEEEeCCCcccc
Confidence 444445678899999866322211 01001 1 12233 479999999999875
No 55
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=85.27 E-value=0.23 Score=43.56 Aligned_cols=24 Identities=17% Similarity=0.158 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCccEEEeCCcccce
Q 024595 167 LRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 167 ~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
+.+..+++++++++++-||.-...
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v~~ 286 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQDA 286 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCTT
T ss_pred HHHHHHHHHcCCcEEEEccchhcc
Confidence 456778999999999999997654
No 56
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=80.09 E-value=0.98 Score=39.04 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=31.3
Q ss_pred cCCCEEEecCCccCCC------CCC----CC--CChhhhhhcccc----cCCCCCCCceEEcCCCcccCC
Q 024595 8 LEIDFVISTGDNFYED------GLT----GE--EDPAFLDSFTSI----YTAPSLQKQWYNVLGNHDYRG 61 (265)
Q Consensus 8 ~~pd~vv~~GD~~~~~------g~~----~~--~~~~~~~~~~~~----~~~~~l~~p~~~i~GNHD~~~ 61 (265)
.+||++|++|..++.. |.- .. +...+.+.|+.+ ...-.-.+.+++|||+||...
T Consensus 179 ~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~~ 248 (460)
T 3flo_A 179 VKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAIS 248 (460)
T ss_dssp CCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCTTBTTC
T ss_pred cCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHHHHHHhccCCCEEEEeCCcccccC
Confidence 4899999999988433 210 00 012233333332 221123588999999999853
No 57
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=77.62 E-value=1 Score=39.06 Aligned_cols=55 Identities=11% Similarity=0.030 Sum_probs=29.6
Q ss_pred CCceEEcCCCcccCCCcc--cccc-ccccccC--CCc-eeeeeeEecCceEEEEEEeCccc
Q 024595 47 QKQWYNVLGNHDYRGDVE--AQLS-PVLTRKD--SRW-LCSRSFILDAEIAEFVFVDTTPF 101 (265)
Q Consensus 47 ~~p~~~i~GNHD~~~~~~--~~~~-~~~~~~~--~~~-~~~~~y~~~~~~~~~i~lds~~~ 101 (265)
.+|+.++|||||--+... ..+. .+++... ..+ ..++.|.++.++++|++...+..
T Consensus 296 ~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqni 356 (476)
T 3e0j_A 296 SVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNV 356 (476)
T ss_dssp TSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHHH
T ss_pred CceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCCH
Confidence 689999999999754210 0000 0111110 111 12355667777888887765543
No 58
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=54.16 E-value=16 Score=28.53 Aligned_cols=44 Identities=16% Similarity=0.029 Sum_probs=26.0
Q ss_pred EEEEeccccccCCCCCChHHHHHHHHHHHHhCCccEEEeCCcccce
Q 024595 145 KIVVGHHTIKSAGHHGVTKELLLRLLPILEENNVDMYVNGHDHCLQ 190 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~~ 190 (265)
-++++|||++- ...........+....+.++++ .+++-|+....
T Consensus 59 dlIitHHp~~f-~~~~~~~~~~~~~i~~li~~~I-~ly~~Ht~lD~ 102 (242)
T 2yyb_A 59 DFLIVHHGLFW-GKPFPIVGHHKRRLETLFQGGI-NLYAAHLPLDA 102 (242)
T ss_dssp SEEEEEECSCS-SCCCCSCHHHHHHHHHHHHTTC-EEEECSHHHHH
T ss_pred CEEEECCCcCc-CcccccccHHHHHHHHHHHCCC-eEEEeccHHhc
Confidence 38899999864 3322222333444455556777 66788886543
No 59
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=46.44 E-value=26 Score=27.74 Aligned_cols=44 Identities=7% Similarity=0.021 Sum_probs=24.4
Q ss_pred EEEEeccccccCCCCCC-hHHHHHHHHHHHHhCCccEEEeCCcccc
Q 024595 145 KIVVGHHTIKSAGHHGV-TKELLLRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
-++++|||++-...... ......+....+.++++ .+++-|+...
T Consensus 61 dlIitHHP~~f~~~~~~~~~~~~~~~i~~li~~~I-~lya~Ht~lD 105 (267)
T 2fyw_A 61 DLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDI-AVYVSHTNID 105 (267)
T ss_dssp SEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTC-EEEECSHHHH
T ss_pred CEEEECCccccCCccccccCchHHHHHHHHHHCCC-eEEEeecccc
Confidence 48899999864322111 12223344444555777 6677787543
No 60
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=37.70 E-value=37 Score=26.50 Aligned_cols=52 Identities=17% Similarity=0.023 Sum_probs=27.2
Q ss_pred HHHHhhcCCCCeEEEEecccccc-CCCCCChHHHHHHHHHHHHhCCccEEEeCCcccc
Q 024595 133 VDGALKNSKAKWKIVVGHHTIKS-AGHHGVTKELLLRLLPILEENNVDMYVNGHDHCL 189 (265)
Q Consensus 133 l~~~l~~~~~~~~iv~~H~P~~~-~~~~~~~~~~~~~l~~~~~~~~v~~vl~GH~H~~ 189 (265)
+++..+.. --++++|||++- ......... ..+....+.++++ .+++-|+...
T Consensus 49 i~eAi~~~---adlIitHHP~~f~~~~~~i~~~-~~~~i~~li~~~I-~ly~~HtnlD 101 (247)
T 1nmo_A 49 LDEAVRLG---ADAVIVHHGYFWKGESPVIRGM-KRNRLKTLLANDI-NLYGWHLPLD 101 (247)
T ss_dssp HHHHHHTT---CSEEEEEECSCCTTSCCCCCTH-HHHHHHHHHHTTC-EEEECCHHHH
T ss_pred HHHHHhCC---CCEEEECCchhccCCCccccch-HHHHHHHHHHCCC-EEEEeeechh
Confidence 44444432 238899999854 322211112 2333444445677 6677787544
No 61
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=34.69 E-value=48 Score=27.99 Aligned_cols=43 Identities=12% Similarity=0.283 Sum_probs=23.9
Q ss_pred EEEEeccccccCCCCCC-hHHHHHHHHHHHHhCCccEEEeCCccc
Q 024595 145 KIVVGHHTIKSAGHHGV-TKELLLRLLPILEENNVDMYVNGHDHC 188 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~ 188 (265)
-+|++|||++-...... ......+....+.++++ .+++-|+-.
T Consensus 87 dlIItHHPlif~~lk~i~~~~~~~r~i~~li~~~I-avya~HTnl 130 (397)
T 2gx8_A 87 NVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDI-AIYAAHTNV 130 (397)
T ss_dssp CEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTC-EEEECCHHH
T ss_pred CEEEECCccccCCccccCcCcHHHHHHHHHHHCCC-eEEEeechh
Confidence 38899999864332211 12223333444445677 667778754
No 62
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=34.59 E-value=44 Score=27.94 Aligned_cols=42 Identities=12% Similarity=0.297 Sum_probs=23.4
Q ss_pred EEEEeccccccCCCCCC-hHHHHHHHHHHHHhCCccEEEeCCccc
Q 024595 145 KIVVGHHTIKSAGHHGV-TKELLLRLLPILEENNVDMYVNGHDHC 188 (265)
Q Consensus 145 ~iv~~H~P~~~~~~~~~-~~~~~~~l~~~~~~~~v~~vl~GH~H~ 188 (265)
-+|++|||++-...... .......+..++ ++++ .+++-|+-.
T Consensus 63 dlIItHHPlif~~~k~i~~~~~~r~i~~li-~~~I-alya~HTnl 105 (370)
T 2nyd_A 63 NTIISHHPLIFKGVTSLKANGYGLIIRKLI-QHDI-NLIAMHTNL 105 (370)
T ss_dssp CEEEESSCSSCSCCSCCCSSTHHHHHHHHH-HTTC-EEEECCHHH
T ss_pred CEEEECCCcccCCccccCcCCHHHHHHHHH-HCCC-eEEEeechh
Confidence 48899999864332211 112233344444 5677 667778754
No 63
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=33.80 E-value=14 Score=29.05 Aligned_cols=39 Identities=28% Similarity=0.401 Sum_probs=24.7
Q ss_pred CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
+|.+|++||++. .|.. ..+. +..+. ..++++|+||||..
T Consensus 47 ~d~ii~~GD~vd-~g~~---~~~~---l~~l~-----~~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 47 SDTLVAVGDLVN-KGPD---SFGV---VRLLK-----RLGAYSVLGNHDAK 85 (262)
T ss_dssp TSEEEECSCCSS-SSSC---HHHH---HHHHH-----HHTCEECCCHHHHH
T ss_pred CCEEEEecCCCC-CCCC---HHHH---HHHHH-----HCCCEEEeCcChHH
Confidence 499999999993 4421 1121 12111 23799999999964
No 64
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=32.27 E-value=70 Score=23.18 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHHHhhcCC-------CCeEEEEeccccccCCCCCChH---HHHHHHHHHHHhCC-ccEEEeCCcccc
Q 024595 124 EYLSDLLKDVDGALKNSK-------AKWKIVVGHHTIKSAGHHGVTK---ELLLRLLPILEENN-VDMYVNGHDHCL 189 (265)
Q Consensus 124 ~~~~~Q~~wl~~~l~~~~-------~~~~iv~~H~P~~~~~~~~~~~---~~~~~l~~~~~~~~-v~~vl~GH~H~~ 189 (265)
.+++.|.+ |++.|.... ...+|.+.-.-+|..+...... ...+.+..+++++. ..+.+.||+-..
T Consensus 22 ~~~d~q~~-l~~~l~~~~v~v~~~~~~~~i~~~~~i~F~~~sa~L~~~~~~~L~~la~~l~~~~~~~i~I~GhTD~~ 97 (169)
T 3ldt_A 22 IYRDSKRK-IIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNV 97 (169)
T ss_dssp HHHHHHHH-HHHHHHHTTCEEEEETTEEEEEEETTTCCC-CCHHHHHHHCHHHHHHHHHHTTCTTSCEEEEEECTTS
T ss_pred HHHHHHHH-HHHHHhhCCcEEEEeCCEEEEEecCcceeCCCCceeCHHHHHHHHHHHHHHHhCCCCeEEEEeEeCCC
Confidence 45677888 999988632 2223333222233332210011 22355677777764 589999999654
No 65
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=31.91 E-value=2.4e+02 Score=24.00 Aligned_cols=45 Identities=16% Similarity=0.162 Sum_probs=25.1
Q ss_pred CCEEEecCCccCCCCCCCCCChhhhhhcccccCCCCCCCceEEcCCCcccC
Q 024595 10 IDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYTAPSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 10 pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~p~~~i~GNHD~~ 60 (265)
.|.+|++||++ +.|.. ..+....+..+. ...+.+++.+.||||..
T Consensus 241 ~~~~v~lGD~v-drG~~---s~e~~~~l~~l~--~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 241 TNPYIFNGDFV-DRGSF---SVEVILTLFGFK--LLYPDHFHLLRGNHETD 285 (477)
T ss_dssp TBCEEEESCCS-SSSTT---HHHHHHHHHHHH--HHSTTTEEEECCTTSSH
T ss_pred cCeEEEecccc-CCCcc---hHHHHHHHHHHH--hhCCCceEeecCCccHH
Confidence 35699999999 45521 112111111100 01245799999999953
No 66
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=28.07 E-value=21 Score=29.96 Aligned_cols=18 Identities=33% Similarity=0.207 Sum_probs=14.8
Q ss_pred ccccccCCCEEEecCCcc
Q 024595 3 LIGEKLEIDFVISTGDNF 20 (265)
Q Consensus 3 ~~~~~~~pd~vv~~GD~~ 20 (265)
++.++.+||+|+..||..
T Consensus 88 ~~l~~~kPD~Vlv~gd~~ 105 (385)
T 4hwg_A 88 EVLEKEKPDAVLFYGDTN 105 (385)
T ss_dssp HHHHHHCCSEEEEESCSG
T ss_pred HHHHhcCCcEEEEECCch
Confidence 455678999999999965
No 67
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=26.13 E-value=48 Score=27.19 Aligned_cols=48 Identities=21% Similarity=0.192 Sum_probs=27.1
Q ss_pred CCCEEEecCCccCCCCCCCCCChhhhhhcccccC-CCCCCCceEEcCCCcccC
Q 024595 9 EIDFVISTGDNFYEDGLTGEEDPAFLDSFTSIYT-APSLQKQWYNVLGNHDYR 60 (265)
Q Consensus 9 ~pd~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~i~GNHD~~ 60 (265)
++|.+|++||++ +.|.. ..+....+..+.. ....+.+++++.||||..
T Consensus 105 ~~d~~v~lGD~v-drG~~---s~evl~~l~~l~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 105 GEGHMVMTGDIF-DRGHQ---VNEVLWFMYQLDQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp TTCEEEECSCCS-SSSSC---HHHHHHHHHHHHHHHHHTTCEEEECCCHHHHH
T ss_pred CCCEEEEECCCc-CCCCC---HHHHHHHHHHHHHHHhhCCCeEEEEecCCcHH
Confidence 579999999999 44421 1122111111100 001235799999999964
No 68
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=20.45 E-value=75 Score=14.73 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=11.7
Q ss_pred EEEEEecCCCeEEEEE
Q 024595 241 VVLFYDVHGNILHKWS 256 (265)
Q Consensus 241 ~~~~~~~~g~~~~~~~ 256 (265)
....|+.+|+++.++.
T Consensus 6 ss~IYD~~g~~i~~lg 21 (26)
T 2v2f_A 6 SSKIYDNKNQLIADLG 21 (26)
T ss_pred CCEEEeCCCCEeeecc
Confidence 3456888888888763
Done!