BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 024596
         (265 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2R8U|A Chain A, Structure Of Fragment Of Human End-Binding Protein 1 (Eb1)
           Containing The N-Terminal Domain At 1.35 A Resolution
 pdb|2R8U|B Chain B, Structure Of Fragment Of Human End-Binding Protein 1 (Eb1)
           Containing The N-Terminal Domain At 1.35 A Resolution
          Length = 268

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 134/234 (57%), Gaps = 30/234 (12%)

Query: 14  VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQL+L++IE+  SGA  CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
           +K+LQ  F ++ ++K I V+KLVKG+  DN EF+QW K++ D+   G   ++Y+PV  R 
Sbjct: 75  FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR- 130

Query: 134 KGGKE--------------------RSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKI 173
             G+E                     SS   Q+   + +T     AG G +   P     
Sbjct: 131 -QGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGV--- 186

Query: 174 YGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
              N   E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 187 --GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 238


>pdb|1VKA|A Chain A, Southeast Collaboratory For Structural Genomics:
           Hypothetical Human Protein Q15691 N-Terminal Fragment
 pdb|1VKA|B Chain B, Southeast Collaboratory For Structural Genomics:
           Hypothetical Human Protein Q15691 N-Terminal Fragment
          Length = 153

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 83/119 (69%), Gaps = 3/119 (2%)

Query: 14  VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQL+L++IE+  SGA  CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 28  LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 87

Query: 74  YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR 132
           +K+LQ  F ++ ++K I V+KLVKG+  DN EF+QW K++ D+   G   ++Y+PV  R
Sbjct: 88  FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR 143


>pdb|1PA7|A Chain A, Crystal Structure Of Amino-Terminal Microtubule Binding
           Domain Of Eb1
 pdb|1UEG|A Chain A, Crystal Structure Of Amino-Terminal Microtubule Binding
           Domain Of Eb1
          Length = 130

 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 83/119 (69%), Gaps = 3/119 (2%)

Query: 14  VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
           + R+++L WIN  LQL+L++IE+  SGA  CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR 132
           +K+LQ  F ++ ++K I V+KLVKG+  DN EF+QW K++ D+   G   ++Y+PV  R
Sbjct: 75  FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR 130


>pdb|1V5K|A Chain A, Solution Structure Of The Ch Domain From Mouse Eb-1
          Length = 115

 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 74/101 (73%)

Query: 16  RNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYK 75
           R+++L WIN  LQL+L++IE+  SGA  CQ +DM +PG + + KV F AK E++ IQN+K
Sbjct: 10  RHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFK 69

Query: 76  VLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDS 116
           +LQ  F ++ ++K I V+KLVKG+  DN EF+QW K++ DS
Sbjct: 70  ILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDS 110


>pdb|3CO1|A Chain A, Crystal Structure Of Microtubule Binding Domain Of Human
           Eb3
          Length = 132

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 3/119 (2%)

Query: 14  VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
           + R+++L W+N+ L L+ ++IE+  SGA  CQ +DM +PG V + KV F AK E++ I N
Sbjct: 17  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 76

Query: 74  YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR 132
           +KVLQ  F K+ ++K I V KLVKG+  DN EF+QW K++ D+   G   ++YNP+  R
Sbjct: 77  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLAR 132


>pdb|1WYO|A Chain A, Solution Structure Of The Ch Domain Of Human Microtubule-
           Associated Protein RpEB FAMILY MEMBER 3
          Length = 159

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 3/119 (2%)

Query: 14  VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
           + R+++L W+N+ L L+ ++IE+  SGA  CQ +DM +PG V + KV F AK E++ I N
Sbjct: 22  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 81

Query: 74  YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR 132
           +KVLQ  F K+ ++K I V KLVKG+  DN EF+QW K++ D+   G   ++YNP+  R
Sbjct: 82  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLAR 137


>pdb|2QJZ|A Chain A, Structural Basis Of Microtubule Plus End Tracking By
           Xmap215, Clip-170 And Eb1
 pdb|2QJZ|B Chain B, Structural Basis Of Microtubule Plus End Tracking By
           Xmap215, Clip-170 And Eb1
          Length = 123

 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 3/119 (2%)

Query: 14  VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
           + R++ L WIN  LQL+L++IE+  SGA  CQ  D  +PG + + KV F AK E++ IQN
Sbjct: 5   LSRHDXLAWINESLQLNLTKIEQLCSGAAYCQFXDXLFPGSIALKKVKFQAKLEHEYIQN 64

Query: 74  YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR 132
           +K+LQ  F +  ++K I V+KLVKG+  DN EF+QW K++ D+   G   ++Y+PV  R
Sbjct: 65  FKILQAGFKRXGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR 120


>pdb|2QJX|A Chain A, Structural Basis Of Microtubule Plus End Tracking By
           Xmap215, Clip-170 And Eb1
          Length = 127

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)

Query: 16  RNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYK 75
           R ELLTW+N  L L+  +IEE  +GA  CQ+ D  Y G +P ++V F+A  EY+   NYK
Sbjct: 12  RTELLTWLNGLLNLNYKKIEECGTGAAYCQIXDSIY-GDLPXNRVKFNATAEYEFQTNYK 70

Query: 76  VLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRY 113
           +LQ  F++  IEK + V+KL++ +  DNLEFLQWLK++
Sbjct: 71  ILQSCFSRHGIEKTVYVDKLIRCKFQDNLEFLQWLKKH 108


>pdb|4ABO|I Chain I, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
          Length = 145

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 4/121 (3%)

Query: 16  RNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYK 75
           R ELL WIN    L L+RIE+   G    Q+ D  Y  + P+ KVNF+   EY  I N+K
Sbjct: 8   RQELLAWINQVTSLGLTRIEDCGKGYAMIQIFDSIYQDI-PLKKVNFECNNEYQYINNWK 66

Query: 76  VLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKG 135
           VLQ VF K  I+K ++  +L + +  DNLEF+QW KR+ D    G    +Y+ + RR   
Sbjct: 67  VLQQVFLKKGIDKVVDPERLSRCKMQDNLEFVQWAKRFWDQYYPG---GDYDALARRGNR 123

Query: 136 G 136
           G
Sbjct: 124 G 124


>pdb|3TQ7|B Chain B, Eb1cEB3C HETERODIMER IN COMPLEX WITH THE CAP-Gly Domain Of
           P150glued
          Length = 82

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/51 (62%), Positives = 42/51 (82%), Gaps = 1/51 (1%)

Query: 181 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISG 231
           ++  L++++ DLKL+VD LEKERDFYF+KLRDIE++CQ  E EN PV ISG
Sbjct: 2   QILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPV-ISG 51


>pdb|1YIG|A Chain A, Crystal Structure Of The Human Eb1 C-Terminal Dimerization
           Domain
 pdb|1YIG|B Chain B, Crystal Structure Of The Human Eb1 C-Terminal Dimerization
           Domain
          Length = 76

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 176 ANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
            N   E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 8   GNGDDEAAELXQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 59


>pdb|1YIB|A Chain A, Crystal Structure Of The Human Eb1 C-terminal Dimerization
           Domain
          Length = 76

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 176 ANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
            N   E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 8   GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 59


>pdb|1TXQ|B Chain B, Crystal Structure Of The Eb1 C-Terminal Domain Complexed
           With The Cap-Gly Domain Of P150glued
          Length = 86

 Score = 57.4 bits (137), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 176 ANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
            N   E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 5   GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 56


>pdb|1WU9|A Chain A, Crystal Structure Of The C-Terminal Domain Of The End-
           Binding Protein 1 (Eb1)
 pdb|1WU9|B Chain B, Crystal Structure Of The C-Terminal Domain Of The End-
           Binding Protein 1 (Eb1)
 pdb|2HKQ|A Chain A, Crystal Structure Of The C-Terminal Domain Of Human Eb1 In
           Complex With The Cap-Gly Domain Of Human Dynactin-1
           (P150-Glued)
 pdb|2HL5|A Chain A, Crystal Structure Of The C-Terminal Domain Of Human Eb1 In
           Complex With The A49m Mutant Cap-Gly Domain Of Human
           Dynactin-1 (P150-Glued)
 pdb|2HL5|B Chain B, Crystal Structure Of The C-Terminal Domain Of Human Eb1 In
           Complex With The A49m Mutant Cap-Gly Domain Of Human
           Dynactin-1 (P150-Glued)
          Length = 80

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 179 AQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
           + E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 2   SDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 50


>pdb|3GJO|A Chain A, Crystal Structure Of Human Eb1 In Complex With Microtubule
           Tip Localization Signal Peptide Of Macf
 pdb|3GJO|B Chain B, Crystal Structure Of Human Eb1 In Complex With Microtubule
           Tip Localization Signal Peptide Of Macf
 pdb|3GJO|C Chain C, Crystal Structure Of Human Eb1 In Complex With Microtubule
           Tip Localization Signal Peptide Of Macf
 pdb|3GJO|D Chain D, Crystal Structure Of Human Eb1 In Complex With Microtubule
           Tip Localization Signal Peptide Of Macf
          Length = 72

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 179 AQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
           + E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 2   SDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 50


>pdb|3TQ7|A Chain A, Eb1cEB3C HETERODIMER IN COMPLEX WITH THE CAP-Gly Domain Of
           P150glued
          Length = 78

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 35/47 (74%)

Query: 181 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
           E   L +++  LKL+V+ LEKERDFYF KLR+IE++CQ  E EN PV
Sbjct: 2   EAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 48


>pdb|4E61|A Chain A, Crystal Structure Of The Eb1-Like Motif Of Bim1p
 pdb|4E61|B Chain B, Crystal Structure Of The Eb1-Like Motif Of Bim1p
          Length = 106

 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 178 SAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPE 221
           S + + +L++EI   K +V  LE ER+FYF KLRDIEIL  T +
Sbjct: 16  SQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQ 59


>pdb|3MTU|A Chain A, Structure Of The Tropomyosin Overlap Complex From Chicken
           Smooth Muscle
 pdb|3MTU|B Chain B, Structure Of The Tropomyosin Overlap Complex From Chicken
           Smooth Muscle
 pdb|3MTU|C Chain C, Structure Of The Tropomyosin Overlap Complex From Chicken
           Smooth Muscle
 pdb|3MTU|D Chain D, Structure Of The Tropomyosin Overlap Complex From Chicken
           Smooth Muscle
          Length = 75

 Score = 40.8 bits (94), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/28 (60%), Positives = 22/28 (78%)

Query: 200 EKERDFYFAKLRDIEILCQTPELENLPV 227
           E ++DFYF KLR+IE++CQ  E EN PV
Sbjct: 29  EADKDFYFGKLRNIELICQENEGENDPV 56


>pdb|3MUD|C Chain C, Structure Of The Tropomyosin Overlap Complex From Chicken
           Smooth Muscle
 pdb|3MUD|D Chain D, Structure Of The Tropomyosin Overlap Complex From Chicken
           Smooth Muscle
          Length = 75

 Score = 40.4 bits (93), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 22/28 (78%)

Query: 200 EKERDFYFAKLRDIEILCQTPELENLPV 227
           E ++DFYF KLR+IE++CQ  E EN PV
Sbjct: 29  EADKDFYFGKLRNIELICQENEGENDPV 56


>pdb|3I8O|A Chain A, A Domain Of A Functionally Unknown Protein From
           Methanocaldococcus Jannaschii Dsm 2661
          Length = 142

 Score = 29.6 bits (65), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 127 NPVERRCKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKIYGANSAQ---EVQ 183
           + +E +   G+E   +G +++ K ++  + HN      G RP + +I+ A S +    ++
Sbjct: 40  SELEYQANXGREIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAXIR 99

Query: 184 ALSKEITDLKLSVDLLEKERDFYFAKLRDIE 214
            ++KE   + L+ D ++    +  AK + IE
Sbjct: 100 KVAKETNSILLTSDWIQ----YNLAKAQGIE 126


>pdb|2QE7|D Chain D, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 pdb|2QE7|E Chain E, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 pdb|2QE7|F Chain F, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
          Length = 462

 Score = 28.1 bits (61), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 70  MIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPV 129
           ++Q Y  LQD+   L +++  + +KL+  R      FL       +   G  M   Y PV
Sbjct: 366 VLQRYNDLQDIIAILGMDELSDEDKLIVARARKIQRFLSQPFHVAEQFTG--MPGKYVPV 423

Query: 130 ERRCKGGKE 138
           +   +G KE
Sbjct: 424 KETVRGFKE 432


>pdb|1M5I|A Chain A, Crystal Structure Of The Coiled Coil Region 129-250 Of The
           Tumor Suppressor Gene Product Apc
          Length = 125

 Score = 27.7 bits (60), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 5/46 (10%)

Query: 182 VQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
           ++ L KE + L   +D  EKE+D+Y+A+L+++     T  +++LP+
Sbjct: 9   LEELEKERSLLLADLDKEEKEKDWYYAQLQNL-----TKRIDSLPL 49


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.134    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,219,366
Number of Sequences: 62578
Number of extensions: 270002
Number of successful extensions: 684
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 660
Number of HSP's gapped (non-prelim): 26
length of query: 265
length of database: 14,973,337
effective HSP length: 97
effective length of query: 168
effective length of database: 8,903,271
effective search space: 1495749528
effective search space used: 1495749528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)