BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024596
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJJ5|EB1B_ARATH Microtubule-associated protein RP/EB family member 1B
OS=Arabidopsis thaliana GN=EB1B PE=1 SV=1
Length = 293
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/241 (75%), Positives = 213/241 (88%), Gaps = 6/241 (2%)
Query: 1 MATNIGMMDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKV 60
MATNIGMMDSAYFVGRNE+L+WIN+RL L+LSRIEEAASGAVQCQMLDMT+PGVVPMHKV
Sbjct: 1 MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60
Query: 61 NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGG 120
NF+AK EY+MIQNYKV+Q+VF KLKI K +EVN+LVKGRPLDNLEFLQWLKR+CDS+NGG
Sbjct: 61 NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120
Query: 121 IMNENYNPVERRCKGGKERSSRGSQKISKSLQTNNMHN--AGSGDIGHRPRQAKIY---- 174
IMNENYNPVERR +GG+E+S +GS KISKSLQTNNMH+ + + P+QAK +
Sbjct: 121 IMNENYNPVERRSRGGREKSVKGSSKISKSLQTNNMHHPPVATSNKPAGPKQAKSHGIGG 180
Query: 175 GANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISGLLI 234
G+NS+ EVQALSKE+ DLK+SVDLLEKERDFYF+KLRDIEILCQTPEL++LP+ ++ I
Sbjct: 181 GSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVVAVKKI 240
Query: 235 L 235
L
Sbjct: 241 L 241
>sp|Q7XJ60|EB1A_ARATH Microtubule-associated protein RP/EB family member 1A
OS=Arabidopsis thaliana GN=EB1A PE=1 SV=1
Length = 276
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/240 (75%), Positives = 204/240 (85%), Gaps = 11/240 (4%)
Query: 1 MATNIGMMDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKV 60
MATNIGMMDSAYFVGRNE+LTWIN+RL L+LSR+EEAASGAVQCQMLDMT+PGVVPMHKV
Sbjct: 1 MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60
Query: 61 NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGG 120
NFDAK EYDMIQNYKVLQDVFNKLKI K +E+N+LVKGRPLDNLEFLQWLKR+CDS+NGG
Sbjct: 61 NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120
Query: 121 IMNENYNPVERRCKGGKERSSRGSQKISKSLQTNNMH-NAGSGDIG----HRPRQAKIYG 175
IMNENYNPVERR + GKERS +GS KI KSLQTNN H S +G P+ AK
Sbjct: 121 IMNENYNPVERRSRNGKERSVKGSNKIPKSLQTNNNHPPPNSSSVGLSKASGPKSAK--- 177
Query: 176 ANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISGLLIL 235
A EVQALSKE+ DLK+S DLLEKERDFYF+KLRD+EILCQTPEL++LP+ ++ IL
Sbjct: 178 ---AAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKIL 234
>sp|Q9FGQ6|EB1C_ARATH Microtubule-associated protein RP/EB family member 1C
OS=Arabidopsis thaliana GN=EB1C PE=1 SV=1
Length = 329
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 181/252 (71%), Gaps = 31/252 (12%)
Query: 1 MATNIGMMDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKV 60
MATNIGMMDSAYFVGR+E+L WIN+ LQL+LS++EEA SGAV CQ++D +PG VPMHKV
Sbjct: 1 MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60
Query: 61 NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGG 120
NFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV+KLVKGRPLDNLEF+QW+K+YCDSVNGG
Sbjct: 61 NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120
Query: 121 IMNENYNPVERR--CKGGKERSSR-----------------------GSQKISKSLQTNN 155
NY+ +ERR KGGKE + R G++K
Sbjct: 121 --QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTG 178
Query: 156 MHNAGSGDIGHRPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEI 215
H++ +G+ H + + A ++ V A ++IT+LKL +D LEKERDFYF+KLRD+EI
Sbjct: 179 THHSSTGNHHHSSKPS----AKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEI 234
Query: 216 LCQTPELENLPV 227
LCQ P+ E+LP+
Sbjct: 235 LCQNPDTEHLPL 246
>sp|Q9UPY8|MARE3_HUMAN Microtubule-associated protein RP/EB family member 3 OS=Homo
sapiens GN=MAPRE3 PE=1 SV=1
Length = 281
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 146/246 (59%), Gaps = 28/246 (11%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L W+N+ L L+ ++IE+ SGA CQ +DM +PG V + KV F AK E++ I N
Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+KVLQ F K+ ++K I V KLVKG+ DN EF+QW K++ D+ G ++YNP+ R
Sbjct: 75 FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLAR- 130
Query: 134 KG---------------------GKERSSRGSQKISKSLQTNN-MHNAGSGDIGHR-PRQ 170
+G G R S K++QT+ + N I + P
Sbjct: 131 QGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPS 190
Query: 171 AKIYGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRIS 230
A+ G + ++ L++++ DLKL+VD LEKERDFYF+KLRDIE++CQ E EN PV IS
Sbjct: 191 ARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPV-IS 249
Query: 231 GLLILI 236
G++ ++
Sbjct: 250 GIIGIL 255
>sp|Q5XIT1|MARE3_RAT Microtubule-associated protein RP/EB family member 3 OS=Rattus
norvegicus GN=Mapre3 PE=1 SV=1
Length = 281
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 145/245 (59%), Gaps = 26/245 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L W+N+ L L+ ++IE+ SGA CQ +DM +PG V + KV F AK E++ I N
Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP-VERR 132
+KVLQ F K+ ++K I V KLVKG+ DN EF+QW K++ D+ G ++YNP + R+
Sbjct: 75 FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQ 131
Query: 133 CKGGKERSSRGSQKISKSLQ--------------TNNMHNAGSGD-------IGHRPRQA 171
+ + G Q +KS + NM +G + P A
Sbjct: 132 GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSA 191
Query: 172 KIYGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISG 231
+ G + ++ L++++ DLKL+VD LEKERDFYF+KLRDIE++CQ E EN PV ISG
Sbjct: 192 RNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPV-ISG 250
Query: 232 LLILI 236
++ ++
Sbjct: 251 IIGIL 255
>sp|Q6PER3|MARE3_MOUSE Microtubule-associated protein RP/EB family member 3 OS=Mus
musculus GN=Mapre3 PE=1 SV=1
Length = 281
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 145/245 (59%), Gaps = 26/245 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L W+N+ L L+ ++IE+ SGA CQ +DM +PG V + KV F AK E++ I N
Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP-VERR 132
+KVLQ F K+ ++K I V KLVKG+ DN EF+QW K++ D+ G ++YNP + R+
Sbjct: 75 FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQ 131
Query: 133 CKGGKERSSRGSQKISKSLQ--------------TNNMHNAGSGD-------IGHRPRQA 171
+ + G Q +KS + NM +G + P A
Sbjct: 132 GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSA 191
Query: 172 KIYGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPVRISG 231
+ G + ++ L++++ DLKL+VD LEKERDFYF+KLRDIE++CQ E EN PV ISG
Sbjct: 192 RNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPV-ISG 250
Query: 232 LLILI 236
++ ++
Sbjct: 251 IIGIL 255
>sp|Q5R7Z5|MARE1_PONAB Microtubule-associated protein RP/EB family member 1 OS=Pongo
abelii GN=MAPRE1 PE=2 SV=3
Length = 268
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 28/240 (11%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR- 132
+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G ++Y+PV R
Sbjct: 75 FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAARQ 131
Query: 133 -----------------CKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKIYG 175
K SS Q+ + +T AG G + P
Sbjct: 132 GQETAVAPSLVAPALNKPKKPLSSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGV----- 186
Query: 176 ANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV--RISGLL 233
N E L +++ LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV RI +L
Sbjct: 187 GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDIL 246
>sp|Q15691|MARE1_HUMAN Microtubule-associated protein RP/EB family member 1 OS=Homo
sapiens GN=MAPRE1 PE=1 SV=3
Length = 268
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 138/242 (57%), Gaps = 32/242 (13%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G ++Y+PV R
Sbjct: 75 FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR- 130
Query: 134 KGGKE--------------------RSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKI 173
G+E SS Q+ + +T AG G + P
Sbjct: 131 -QGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGV--- 186
Query: 174 YGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV--RISG 231
N E L +++ LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV RI
Sbjct: 187 --GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVD 244
Query: 232 LL 233
+L
Sbjct: 245 IL 246
>sp|Q3ZBD9|MARE1_BOVIN Microtubule-associated protein RP/EB family member 1 OS=Bos taurus
GN=MAPRE1 PE=2 SV=3
Length = 268
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 135/240 (56%), Gaps = 28/240 (11%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR- 132
+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R
Sbjct: 75 FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAARQ 131
Query: 133 -----------------CKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKIYG 175
K SS Q+ + +T AG G + P
Sbjct: 132 GQETAMAPSLVAPALNKPKKPLSSSSAAPQRPITTHRTTATPKAGPGVVRKNPGV----- 186
Query: 176 ANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV--RISGLL 233
N E L +++ LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV RI +L
Sbjct: 187 GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENNPVLQRIVDIL 246
>sp|Q66T82|MARE1_COTJA Microtubule-associated protein RP/EB family member 1 OS=Coturnix
coturnix japonica GN=MAPRE1 PE=2 SV=1
Length = 263
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 135/231 (58%), Gaps = 29/231 (12%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL L++IE+ SGA CQ +DM +PG V + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSGAAYCQFMDMLFPGSVALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+KVLQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R
Sbjct: 75 FKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR- 130
Query: 134 KGGKERSSRGSQKISKSLQTNNMHNA----GSGDIG-HRPRQAK------------IYGA 176
+G + ++ +L M+ G+G G RP A+ + A
Sbjct: 131 --------QGQETVAPNLVAPVMNKPKKPLGTGSAGPQRPIVAQRTPATPKGGTGMVKKA 182
Query: 177 NSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
E L ++I LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV
Sbjct: 183 AGDDESAGLIEQINVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 233
>sp|Q66HR2|MARE1_RAT Microtubule-associated protein RP/EB family member 1 OS=Rattus
norvegicus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 137/242 (56%), Gaps = 32/242 (13%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R
Sbjct: 75 FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR- 130
Query: 134 KGGKERS--------------------SRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKI 173
G+E + S Q+ + +T AG G + P
Sbjct: 131 -QGQETAVAPSLVAPALSKPKKPLGSGSAAPQRPIATQRTTAAPKAGPGMVRKNPGM--- 186
Query: 174 YGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV--RISG 231
N E L +++ LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV RI
Sbjct: 187 --GNGDDEAAELMQQVKVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVD 244
Query: 232 LL 233
+L
Sbjct: 245 IL 246
>sp|Q61166|MARE1_MOUSE Microtubule-associated protein RP/EB family member 1 OS=Mus
musculus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 160 bits (406), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 137/242 (56%), Gaps = 32/242 (13%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL+L++IE+ SGA CQ +DM +PG + + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+K+LQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R
Sbjct: 75 FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR- 130
Query: 134 KGGKE--------------------RSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKI 173
G+E S+ Q+ + +T AG G + P
Sbjct: 131 -QGQETAVAPSLVAPALSKPKKPLGSSTAAPQRPIATQRTTAAPKAGPGMVRKNPGV--- 186
Query: 174 YGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV--RISG 231
N E L +++ LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV RI
Sbjct: 187 --GNGDDEAAELMQQVKVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVD 244
Query: 232 LL 233
+L
Sbjct: 245 IL 246
>sp|Q6V291|MARE1_COTCO Microtubule-associated protein RP/EB family member 1 OS=Coturnix
coturnix GN=MAPRE1 PE=2 SV=1
Length = 263
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 29/231 (12%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL L++IE+ SGA CQ +DM +PG V + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSGAAYCQFMDMLFPGSVALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+KVLQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R
Sbjct: 75 FKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR- 130
Query: 134 KGGKERSSRGSQKISKSLQTNNMHNA----GSGDIG-HRPRQAK------------IYGA 176
+G + ++ +L M+ G+G RP A+ + A
Sbjct: 131 --------QGQETVAPNLVAPVMNKPKKPLGTGSAAPQRPIVAQRTPATPKGGTGMVKKA 182
Query: 177 NSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
E L ++I LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV
Sbjct: 183 AGDDESAGLIEQINVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 233
>sp|Q5ZLC7|MARE1_CHICK Microtubule-associated protein RP/EB family member 1 OS=Gallus
gallus GN=MAPRE1 PE=2 SV=1
Length = 258
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 24/226 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL L++IE+ SGA CQ +DM +PG V + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSGAAYCQFMDMLFPGSVALKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+KVLQ F ++ ++K I V+KLVKG+ DN EF+QW K++ D+ G + Y+PV R
Sbjct: 75 FKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR- 130
Query: 134 KGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAK------------IYGANSAQE 181
+G + ++ +L ++ RP A+ + A E
Sbjct: 131 --------QGQETVAPNLVAPVVNKPKKPLAPQRPIVAQRTPATPKGSTGMVKKAAGDDE 182
Query: 182 VQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
L ++I LKL+V+ LEKERDFYF KLR+IE++CQ E EN PV
Sbjct: 183 SAGLIEQINVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPV 228
>sp|Q6P848|MARE1_XENTR Microtubule-associated protein RP/EB family member 1 OS=Xenopus
tropicalis GN=mapre1 PE=2 SV=1
Length = 269
Score = 154 bits (388), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 134/234 (57%), Gaps = 29/234 (12%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R+++L WIN LQL+L++IE+ SG+V CQ +DM +PG V + KV F AK E++ IQN
Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSGSVYCQFMDMLFPGSVVLKKVKFQAKLEHEYIQN 74
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
+KVLQ F K+ ++K I V+KLVKG+ DN EF+QW K++ D+ G ++Y+PV R
Sbjct: 75 FKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KDYDPVAAR- 130
Query: 134 KGGKERS--------------------SRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKI 173
G+E + + Q+ +T + + I +P
Sbjct: 131 -QGQESAPVPVLAAPVLNKPKKPLGSGNTAPQRTVPVQRTAVSNKPPAQGISKKPATV-- 187
Query: 174 YGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELENLPV 227
N E L ++I LK++V+ LEKERDFYF KLR+IE++CQ E E+ PV
Sbjct: 188 --GNGDDESAELIQQINVLKITVEDLEKERDFYFGKLRNIELICQENEGESDPV 239
>sp|Q5ZKK1|MARE2_CHICK Microtubule-associated protein RP/EB family member 2 OS=Gallus
gallus GN=MAPRE2 PE=2 SV=1
Length = 338
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 134/234 (57%), Gaps = 28/234 (11%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ L L+ +++E+ SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 58 MSRHDIIAWVNDILALNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 117
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+PVE R+
Sbjct: 118 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFFDANYDG---KEYDPVEARQ 174
Query: 133 CKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKIYGANSAQ------------ 180
+ G Q + ++++ ++ +G P A G+ ++
Sbjct: 175 GQDALPPPDPGEQIFNLPKKSHHANSPTAGAAKSSP--ASKPGSTPSRPSSAKKAAPSSS 232
Query: 181 ----------EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELEN 224
+V LS+++ LKL+++ +EKERDFYF KLR+IE+LCQ EN
Sbjct: 233 ASKSDKDLETQVIQLSEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGGEN 286
>sp|Q3SZP2|MARE2_BOVIN Microtubule-associated protein RP/EB family member 2 OS=Bos taurus
GN=MAPRE2 PE=2 SV=1
Length = 326
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 24/232 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ + L+ +++E+ SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 57 MSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 116
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+PVE R+
Sbjct: 117 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDG---KEYDPVEARQ 173
Query: 133 CKGGKERSSRGSQ--KISKSLQTNNMHNAGS---------GDIGHRPRQAKIYGANSAQ- 180
+ G Q + K N AG+ G RP AK ++ +
Sbjct: 174 GQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSRPSSAKRASSSGSAS 233
Query: 181 --------EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELEN 224
+V L++++ LKL+++ +EKERDFYF KLR+IE+LCQ EN
Sbjct: 234 RSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQEN 285
>sp|Q7ZXP1|MARE2_XENLA Microtubule-associated protein RP/EB family member 2 OS=Xenopus
laevis GN=mapre2 PE=2 SV=1
Length = 327
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 129/225 (57%), Gaps = 23/225 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ + L+ ++E+ +SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 57 MSRHDIIAWVNDIVCLNYIKVEQLSSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 116
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+P+E R+
Sbjct: 117 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFFDANYDG---KEYDPMEARQ 173
Query: 133 CKGGKERSSRGSQ--KISKSLQTNNMHNAGS---------GDIGHRPRQAKIY------- 174
+ G Q + K N AG+ G RP AK
Sbjct: 174 GQDALPPPDPGEQIFNLPKKPHHANSPTAGAARSSPIAKPGSTSSRPSSAKKAVPCPSVK 233
Query: 175 -GANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQ 218
+ +V L++++ LK++++ +EKERDFYF KLR+IE+LCQ
Sbjct: 234 SDKDLETQVSHLNEQVHSLKIALEGVEKERDFYFGKLREIELLCQ 278
>sp|Q5R4I6|MARE2_PONAB Microtubule-associated protein RP/EB family member 2 OS=Pongo
abelii GN=MAPRE2 PE=2 SV=1
Length = 327
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 24/232 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ + L+ +++E+ SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 58 MSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 117
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+PVE R+
Sbjct: 118 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDG---KEYDPVEARQ 174
Query: 133 CKGGKERSSRGSQ--KISKSLQTNNMHNAGS---------GDIGHRPRQAKIYGANSAQ- 180
+ G Q + K N AG+ G RP AK ++ +
Sbjct: 175 GQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSAS 234
Query: 181 --------EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELEN 224
+V L++++ LKL+++ +EKERDFYF KLR+IE+LCQ EN
Sbjct: 235 RSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQEN 286
>sp|Q15555|MARE2_HUMAN Microtubule-associated protein RP/EB family member 2 OS=Homo
sapiens GN=MAPRE2 PE=1 SV=1
Length = 327
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 24/232 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ + L+ +++E+ SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 58 MSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 117
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+PVE R+
Sbjct: 118 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDG---KEYDPVEARQ 174
Query: 133 CKGGKERSSRGSQ--KISKSLQTNNMHNAGS---------GDIGHRPRQAKIYGANSAQ- 180
+ G Q + K N AG+ G RP AK ++ +
Sbjct: 175 GQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSAS 234
Query: 181 --------EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELEN 224
+V L++++ LKL+++ +EKERDFYF KLR+IE+LCQ EN
Sbjct: 235 KSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQEN 286
>sp|Q8R001|MARE2_MOUSE Microtubule-associated protein RP/EB family member 2 OS=Mus
musculus GN=Mapre2 PE=1 SV=1
Length = 326
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 24/232 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ + L+ +++E+ SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 57 MSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 116
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+PVE R+
Sbjct: 117 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDG---KEYDPVEARQ 173
Query: 133 CKGGKERSSRGSQ--KISKSLQTNNMHNAGS---------GDIGHRPRQAKIYGANSAQ- 180
+ G Q + K N AG+ G RP AK ++ +
Sbjct: 174 GQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSRPSSAKRASSSGSAS 233
Query: 181 --------EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELEN 224
+V L++++ LKL+++ +EKERDFYF KLR+IE+LCQ EN
Sbjct: 234 RSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQEN 285
>sp|Q3B8Q0|MARE2_RAT Microtubule-associated protein RP/EB family member 2 OS=Rattus
norvegicus GN=Mapre2 PE=2 SV=1
Length = 326
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 24/232 (10%)
Query: 14 VGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQN 73
+ R++++ W+N+ + L+ +++E+ SGA CQ +DM +PG + + KV F AK E++ I N
Sbjct: 57 MSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHN 116
Query: 74 YKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVE-RR 132
+K+LQ F ++ ++K I V KLVKGR DNL+F+QW K++ D+ G + Y+PVE R+
Sbjct: 117 FKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDG---KEYDPVEARQ 173
Query: 133 CKGGKERSSRGSQ--KISKSLQTNNMHNAGS---------GDIGHRPRQAKIYGANSAQ- 180
+ G Q + K N AG+ G RP AK ++ +
Sbjct: 174 GQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSAS 233
Query: 181 --------EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPELEN 224
+V L++++ LKL+++ +EKERDFYF KLR+IE+LCQ EN
Sbjct: 234 RSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQEN 285
>sp|P40013|BIM1_YEAST Protein BIM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BIM1 PE=1 SV=1
Length = 344
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 25/237 (10%)
Query: 8 MDSAYFVGRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTE 67
M + R ELLTW+N L L+ +IEE +GA CQ++D Y G +PM++V F+A E
Sbjct: 1 MSAGIGESRTELLTWLNGLLNLNYKKIEECGTGAAYCQIMDSIY-GDLPMNRVKFNATAE 59
Query: 68 YDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYC-----DSVNGGIM 122
Y+ NYK+LQ F++ IEK + V+KL++ + DNLEFLQWLK++ +SV
Sbjct: 60 YEFQTNYKILQSCFSRHGIEKTVYVDKLIRCKFQDNLEFLQWLKKHWIRHKDESVYDPDA 119
Query: 123 NENYNPVERRCKGGKERSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKIYGA------ 176
Y P+ K R+ +S T +A SG + R I G+
Sbjct: 120 RRKYRPIITNNSATKPRTVSNPTTAKRSSST-GTGSAMSGGLATRHSSLGINGSRKTSVT 178
Query: 177 ------------NSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPE 221
S + + +L++EI K +V LE ER+FYF KLRDIEIL T +
Sbjct: 179 QGQLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQ 235
>sp|Q8WQ86|EB1_DICDI Microtubule-associated protein RP/EB family member 1
OS=Dictyostelium discoideum GN=eb1 PE=1 SV=1
Length = 506
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 7/131 (5%)
Query: 15 GRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNY 74
GRNE+L WIN+ LQL +IE+ SGA CQ++D+ +PG + + VNF+AK +Y+ I+N+
Sbjct: 5 GRNEILNWINDLLQLDYKKIEQLGSGAALCQLVDIIHPGKINLKMVNFNAKYDYEYIKNF 64
Query: 75 KVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERR-- 132
LQ+ F KL +EK++EV++LVK RP NLEF QW+K+Y D G E YN +ERR
Sbjct: 65 SYLQESFAKLGVEKYVEVSELVKSRPQANLEFAQWMKKYFDQYYTG---EPYNAIERRIA 121
Query: 133 --CKGGKERSS 141
K+RSS
Sbjct: 122 LKIPTDKDRSS 132
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 29/37 (78%)
Query: 182 VQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQ 218
+Q ++++I + ++++ +EK+RDFYF +LR+ EI CQ
Sbjct: 311 IQEMTEKIANFEITIQDIEKDRDFYFERLREAEIFCQ 347
>sp|Q10113|MAL3_SCHPO Microtubule integrity protein mal3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mal3 PE=1 SV=1
Length = 308
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 24/239 (10%)
Query: 15 GRNELLTWINNRLQLHLSRIEEAASGAVQCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNY 74
R ELL WIN L L+RIE+ G Q+ D Y + P+ KVNF+ EY I N+
Sbjct: 4 SRQELLAWINQVTSLGLTRIEDCGKGYAMIQIFDSIYQDI-PLKKVNFECNNEYQYINNW 62
Query: 75 KVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCK 134
KVLQ VF K I+K ++ +L + + DNLEF+QW KR+ D G +Y+ + RR
Sbjct: 63 KVLQQVFLKKGIDKVVDPERLSRCKMQDNLEFVQWAKRFWDQYYPG---GDYDALARRGN 119
Query: 135 GGKE-----RSSRGSQKISKSLQTNNMHNAGSGDIGHRPRQAKIYGANSA---------Q 180
G SS G+ S+ Q ++ + S AN+A Q
Sbjct: 120 RGPANTRVMNSSAGATGPSRRRQVSSGSSTPSMTKSSANNNNVSSTANTAAVLRAKQAQQ 179
Query: 181 EVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTP------ELENLPVRISGLL 233
++ +L ++ ++ ++ LE+ERDFYF KLR+IEIL QT +EN+ RI +L
Sbjct: 180 QITSLETQLYEVNETMFGLERERDFYFNKLREIEILVQTHLTTSPMSMENMLERIQAIL 238
>sp|A5W7Q2|COBS_PSEP1 Cobalamin synthase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=cobS PE=3 SV=1
Length = 240
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 223 ENLPVRISGLLILIILHFSLFFFFWNDLFPVSLFAWI 259
E+LP R +G ++L+ + F LF W+ L +++FAW+
Sbjct: 169 EHLPRRAAGWVLLVCVLFCLFLGGWSVLLALAVFAWL 205
>sp|P70478|APC_RAT Adenomatous polyposis coli protein OS=Rattus norvegicus GN=Apc PE=1
SV=1
Length = 2842
Score = 35.0 bits (79), Expect = 0.56, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 164 IGHRPRQAKIYGA-NSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPEL 222
+G PR+A + G+ S ++ L KE + L +D EKE+D+Y+A+L+++ T +
Sbjct: 113 MGSFPRRAFVNGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNL-----TKRI 167
Query: 223 ENLPV 227
++LP+
Sbjct: 168 DSLPL 172
>sp|A9BDW6|METK_PROM4 S-adenosylmethionine synthase OS=Prochlorococcus marinus (strain
MIT 9211) GN=metK PE=3 SV=1
Length = 410
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 163 DIGHRPRQAKIYGANSAQEVQALSKEITDLKLSVDLLEKERDFYFAKL--RDIEIL---- 216
+IG++ QA + ANS + AL K+ D+ VD E D F K+ D I+
Sbjct: 75 EIGYKDAQAGGFDANSCAVLVALDKQSPDIAKGVDTAEDHTDDPFDKIGAGDQGIMFGYA 134
Query: 217 C-QTPELENLPVRIS 230
C +TPEL LP+ ++
Sbjct: 135 CNETPELMPLPISLA 149
>sp|A1T8K5|Y2698_MYCVP UPF0042 nucleotide-binding protein Mvan_2698 OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2698 PE=3
SV=1
Length = 319
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 88 KHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNEN--YNPVERRCKGGKERSSRGSQ 145
+H EV V G+P LEFL + D V G E Y V C GGK RS ++
Sbjct: 238 QHHEVRDYVLGQP-GALEFLDSYHQLLDVVIDGYRREGKRYMTVAIGCTGGKHRSVAMAE 296
Query: 146 KISKSLQTNNM 156
+++ LQ +++
Sbjct: 297 ALAERLQDSDL 307
>sp|Q88M93|COBS_PSEPK Cobalamin synthase OS=Pseudomonas putida (strain KT2440) GN=cobS
PE=3 SV=2
Length = 240
Score = 34.3 bits (77), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 223 ENLPVRISGLLILIILHFSLFFFFWNDLFPVSLFAWI 259
E++P R +G ++L+ + F LF W+ L +++FAW+
Sbjct: 169 EHMPRRAAGWVLLVCVLFCLFLGGWSVLLALAVFAWL 205
>sp|A0QWV7|Y3079_MYCS2 UPF0042 nucleotide-binding protein MSMEG_3079/MSMEI_3001
OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=MSMEG_3079 PE=3 SV=1
Length = 291
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 88 KHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNEN--YNPVERRCKGGKERSSRGSQ 145
+H +V V G+P LEFL R D V G E Y V C GGK RS ++
Sbjct: 209 QHPDVRDYVLGQP-GALEFLDTYHRLLDVVIDGYRREGKRYMTVAIGCTGGKHRSVAIAE 267
Query: 146 KISKSLQTNN 155
+++ L+ +
Sbjct: 268 ALAERLEGGD 277
>sp|Q04212|ARA2_YEAST D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ARA2 PE=1 SV=1
Length = 335
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 43 QCQMLDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLD 102
C+ L TY +V +H V F D+++ K L+ + NK I+ N + G P+D
Sbjct: 109 SCERLHTTYLDLVYLHDVEFVKFP--DILEALKELRTLKNKGVIK-----NFGISGYPID 161
Query: 103 NLEFLQWLKRYCDSVNGGI 121
F+ WL YC + I
Sbjct: 162 ---FITWLAEYCSTEESDI 177
>sp|B1KSS8|ATPB_CLOBM ATP synthase subunit beta OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=atpD PE=3 SV=1
Length = 463
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|A7G9Q9|ATPB_CLOBL ATP synthase subunit beta OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=atpD PE=3 SV=1
Length = 463
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|B1IE34|ATPB_CLOBK ATP synthase subunit beta OS=Clostridium botulinum (strain Okra /
Type B1) GN=atpD PE=3 SV=1
Length = 463
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|A5HY52|ATPB_CLOBH ATP synthase subunit beta OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=atpD PE=3 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|C3KYJ3|ATPB_CLOB6 ATP synthase subunit beta OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=atpD PE=3 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|A7FQH9|ATPB_CLOB1 ATP synthase subunit beta OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=atpD PE=3 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|Q61315|APC_MOUSE Adenomatous polyposis coli protein OS=Mus musculus GN=Apc PE=1 SV=1
Length = 2845
Score = 33.1 bits (74), Expect = 1.9, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 164 IGHRPRQAKIYGA-NSAQEVQALSKEITDLKLSVDLLEKERDFYFAKLRDIEILCQTPEL 222
+G PR+ + G+ S ++ L KE + L +D EKE+D+Y+A+L+++ T +
Sbjct: 113 MGSFPRRTFVNGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNL-----TKRI 167
Query: 223 ENLPV 227
++LP+
Sbjct: 168 DSLPL 172
>sp|C1FQP5|ATPB_CLOBJ ATP synthase subunit beta OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=atpD PE=3 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 69 DMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNP 128
++++ Y+ LQD+ L I++ E +KLV GR FL + G M Y P
Sbjct: 364 NILERYRELQDIIAILGIDELSEEDKLVVGRARKIQRFLSQPFTVAEQFTG--MQGKYVP 421
Query: 129 VERRCKGGKE 138
++ +G KE
Sbjct: 422 IKETVRGFKE 431
>sp|A8F3K2|ATPB_THELT ATP synthase subunit beta OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=atpD PE=3 SV=1
Length = 469
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 64 AKTEYDMIQNYKVLQDVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGGIMN 123
A+ +++Q YK LQD+ L +E+ E +KL+ R FL + G N
Sbjct: 362 ARGVQEVLQRYKDLQDIIAILGMEELTEEDKLIVQRARKIQRFLSQPFFVAERFTGA--N 419
Query: 124 ENYNPVERRCKGGKE 138
Y P+ KG KE
Sbjct: 420 GKYVPISETVKGFKE 434
>sp|Q687X5|STEA4_HUMAN Metalloreductase STEAP4 OS=Homo sapiens GN=STEAP4 PE=1 SV=1
Length = 459
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 54 VVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVN 93
++ +H+ ++D TE + N K+L D+ N LKI ++ E N
Sbjct: 78 IIAIHREHYDFLTELTEVLNGKILVDISNNLKINQYPESN 117
>sp|P0A4N0|AMID_STRR6 Oligopeptide transport system permease protein AmiD
OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=amiD PE=3 SV=1
Length = 308
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 221 ELENLPVRISGLLILIILHFSLFFFFWNDLFPVSLFAWI 259
E+ N+ I LLI+I+L +S+ FWN +F +S+ WI
Sbjct: 144 EVYNVISNIPPLLIVIVLTYSIGAGFWNLIFAMSVTTWI 182
>sp|P0A4M9|AMID_STRPN Oligopeptide transport system permease protein AmiD
OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=amiD PE=3 SV=1
Length = 308
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 221 ELENLPVRISGLLILIILHFSLFFFFWNDLFPVSLFAWI 259
E+ N+ I LLI+I+L +S+ FWN +F +S+ WI
Sbjct: 144 EVYNVISNIPPLLIVIVLTYSIGAGFWNLIFAMSVTTWI 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,408,764
Number of Sequences: 539616
Number of extensions: 3967627
Number of successful extensions: 12009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 11944
Number of HSP's gapped (non-prelim): 72
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)