BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024603
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 40/224 (17%)
Query: 43 VLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLESA----A 98
+L A LT FAL G ++G + GA+ GQ TE+GF+ GA +GA++GA+ ++++ ES+
Sbjct: 41 ILSAVLTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWK 100
Query: 99 DGES-----LSKAALLSSLVNGKVFMEWVSPAVLKAYQWQVSNHKMKFLEFIKSSHGMLN 153
ES L ++ SL++G++ E + PA+L A Q Q+
Sbjct: 101 SNESRFGCLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQMG------------------ 142
Query: 154 LNRRFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQLD-NEIG 212
+++ + E+S ++D G KGL+ D++ K+P+ + + + N+
Sbjct: 143 ------------AVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDS 190
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRE 256
CS+CL+ F+ G++ R LP C H FH C+D WL R+GSCP+CR
Sbjct: 191 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRR 234
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 121/224 (54%), Gaps = 40/224 (17%)
Query: 43 VLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLESAAD--- 99
++ A LT FAL G ++G + GA+ GQ TE+GF+ GA IGA++GA+ ++++ ES+ D
Sbjct: 46 IISAILTFFFALVGTLLGALTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLDLWK 105
Query: 100 ------GESLSKAALLSSLVNGKVFMEWVSPAVLKAYQWQVSNHKMKFLEFIKSSHGMLN 153
G L ++ SL++G++ E + PA+L A Q Q+
Sbjct: 106 SDESGFGCFLYLIDVIVSLLSGRLVRERIGPAMLSAVQSQMG------------------ 147
Query: 154 LNRRFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQL-DNEIG 212
++TA+ + + ++D G KGL+ D+++K+P+ + +N
Sbjct: 148 ------------AVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDS 195
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRE 256
CS+CL+ F+ G++ R LP C H FH C+D WL R+GSCP+CR
Sbjct: 196 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRR 239
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 126/232 (54%), Gaps = 48/232 (20%)
Query: 37 IRAMKRVLYAAL-TCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE 95
+ A+ L++AL T FAL G ++G + GA+ GQ TE+GF+ GA +GA++GA+ ++++ E
Sbjct: 24 VSALLANLFSALFTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVFE 83
Query: 96 SA----ADGES-----LSKAALLSSLVNGKVFMEWVSPAVLKAYQWQVSNHKMKFLEFIK 146
S+ ES L +++SL++G++ E + PA+L A Q
Sbjct: 84 SSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQS-------------- 129
Query: 147 SSHGMLNLNRRFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECAL--HSEEL 204
Q+ +E+ +++ +D++D KGL+ D + ++P+ + S E+
Sbjct: 130 ----------------QMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEI 173
Query: 205 IQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRE 256
+ CS+CL+ F+ G++ R LP C H FH C+DKWL R+ SCP+CR
Sbjct: 174 VS------CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRR 219
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 117/231 (50%), Gaps = 43/231 (18%)
Query: 38 RAMKRVLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE-- 95
R + V ALT IFA+ GA G + GA+ G+ + G L GA +GAVAGAI ++++LE
Sbjct: 24 RLIAGVFSGALTGIFAMAGAFTGAVTGAVAGRAAQYGVLRGAALGAVAGAILSVEVLEAS 83
Query: 96 --------SAADGESLSKAALLSSLVNGKVFMEWVSPAVLKAYQWQVSNHKMKFLEFIKS 147
S + G S S A + L G++ E + ++ ++ WQ
Sbjct: 84 RAYWYLELSGSRGPS-SMADFVEQLFRGRLVDEQLMSTMINSHHWQ-------------- 128
Query: 148 SHGMLNLNRRFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQL 207
++S + +Y E DVY +GLS D ++KLP C + S E+++
Sbjct: 129 --------------LRIS--DVSYEEREDVYGELEARGLSGDSLRKLP-CYIMSSEMVR- 170
Query: 208 DNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECV 258
C+ICL+ + G+ R LP C H FH CVDKWL R+GSCP+CR+ V
Sbjct: 171 RQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
>sp|Q8L9W3|ATL23_ARATH E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis thaliana GN=ATL23
PE=1 SV=2
Length = 163
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 141 FLEFIKSSHGMLNLNRRFFFLFQVSTLET--AYREVSDVYDVTGVKGLSEDMIQKLPECA 198
F+ + GM + + FL ST R V VTG KGLS ++K+P+
Sbjct: 33 FMALLLPCVGMCIVFLIYLFLLWCSTRRRIERLRFAEPVKPVTG-KGLSVLELEKIPK-- 89
Query: 199 LHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCR 255
L EL + C++CLE E G S R +P C H FH C D WL+ + CPVCR
Sbjct: 90 LTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCR 146
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
GL +I+ P L + N CSICL +E + R +P C HCFH++CVD+W
Sbjct: 66 GLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEW 125
Query: 245 LTRNGSCPVCRE 256
L + +CP+CR
Sbjct: 126 LRTSATCPLCRN 137
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 179 DVTGVKGLSEDMIQKLPECAL-HSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFH 237
+V GL E +I+ + L S L +++I C ICL ++ ++ R +P C HCFH
Sbjct: 285 EVIVTTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFH 344
Query: 238 SECVDKWLTRNGSCPVCRE 256
SEC+D WL +GSCP+CR
Sbjct: 345 SECIDVWLKIHGSCPLCRN 363
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
GL + I LP L+ I L+ C++CL +F + D R LP C H FH C+D W
Sbjct: 180 GLDQTAIDALP-VFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTW 238
Query: 245 LTRNGSCPVCRECV 258
L N +CP+CR +
Sbjct: 239 LLSNSTCPLCRRSL 252
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 180 VTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSE 239
V +GL ++I+ LP E + I C++CL +FEE ++ R LP+C H FH +
Sbjct: 89 VVASRGLDPNVIKSLPVFTFSDE---THKDPIECAVCLSEFEESETGRVLPNCQHTFHVD 145
Query: 240 CVDKWLTRNGSCPVCRECV 258
C+D W + +CP+CR V
Sbjct: 146 CIDMWFHSHSTCPLCRSLV 164
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 151 MLNLNRRFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQLDNE 210
+L + RRF QVS A + + TG+K + ++++P L+ +I +
Sbjct: 57 VLRITRRFTSDDQVSNASNANANLGRLAAATGLK---KQALKQIP-VGLYGSGIIDM-KA 111
Query: 211 IGCSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRE 256
C ICL FE+G+ R LP C H FH C+D WL SCP CR+
Sbjct: 112 TECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQ 157
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 179 DVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
+V +GL + I+ + L + N I C ICL ++ ++ R +P C HCFH
Sbjct: 286 EVMARRGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHV 345
Query: 239 ECVDKWLTRNGSCPVCRE 256
EC+D WL +GSCP+CR
Sbjct: 346 ECIDVWLKIHGSCPLCRN 363
>sp|Q9ZV51|ATL56_ARATH RING-H2 finger protein ATL56 OS=Arabidopsis thaliana GN=ATL56 PE=2
SV=1
Length = 181
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
GLS ++KLP+ SE E C +C + F +G R LP CGH FH +CVD W
Sbjct: 83 GLSSRFVKKLPQFKF-SEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTW 141
Query: 245 LTRNGSCPVCR 255
L + +CP+CR
Sbjct: 142 LLKASTCPICR 152
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 184 KGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDK 243
KGL + ++Q LP+ S E + + C+ICL +F GD R LP CGH FH C+D
Sbjct: 83 KGLKKKVLQSLPKLTF-SPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDT 141
Query: 244 WLTRNGSCPVCRE 256
WL + SCP CR+
Sbjct: 142 WLGSHSSCPSCRQ 154
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
GLS+D+ + LP ++ E I D++ CS+CL ++ + +++PSCGH FH EC+D W
Sbjct: 86 GLSKDIREMLP-VVIYKESFIVKDSQ--CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 142
Query: 245 LTRNGSCPVCR 255
LT + +CP+CR
Sbjct: 143 LTSHTTCPLCR 153
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECVC 259
C +CL + +GD AR LPSC H FH EC+D WL N +CP+CR+ VC
Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVC 134
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 184 KGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDK 243
+ L + ++ K+P S+ + + CS+CL +FEE D R LP CGH FH +C+D
Sbjct: 79 QALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDT 138
Query: 244 WLTRNGSCPVCRECV 258
W +CP+CR V
Sbjct: 139 WFRSRSTCPLCRAPV 153
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 179 DVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
+V +GL + I+K L N I C ICL ++ ++ R +P C HCFH+
Sbjct: 282 EVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHA 341
Query: 239 ECVDKWLTRNGSCPVCRE 256
+C+D WL +GSCP+CR
Sbjct: 342 KCIDVWLKIHGSCPLCRN 359
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 184 KGLSEDMIQKLPECALHSEE-----LIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
KGL + +Q LP + E + + C+ICL F +G+ R LP CGH FH
Sbjct: 68 KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHV 127
Query: 239 ECVDKWLTRNGSCPVCRE 256
EC+DKWL SCP CR
Sbjct: 128 ECIDKWLVSRSSCPSCRR 145
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 185 GLSEDMIQKLPECAL-HSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDK 243
GL E I+ + L S L N++ C ICL ++ ++ R LP C HCFH+EC+D
Sbjct: 298 GLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDA 357
Query: 244 WLTRNGSCPVCR 255
WL + SCPVCR
Sbjct: 358 WLKLHSSCPVCR 369
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 186 LSEDMIQKLPECALHSEELIQLDNEIG-CSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
+ + I LP LH + +I L +++ C++CL +F D R LP C H FH EC+D W
Sbjct: 96 IDQSFIDALP--LLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTW 153
Query: 245 LTRNGSCPVCRE 256
L N +CP+CR+
Sbjct: 154 LLTNSTCPLCRD 165
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 170 AYREVSDVYDVTGV----KGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDS 225
A R SD V KGL + +++ LP+ +S + + + C+ICL +F GD
Sbjct: 58 ASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLT-YSPDSPPAEKLVECAICLTEFAAGDE 116
Query: 226 ARKLPSCGHCFHSECVDKWLTRNGSCPVCRE 256
R LP CGH FH C+D WL + SCP CR+
Sbjct: 117 LRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQ 147
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 184 KGLSEDMIQKLPECALHSEELI-----QLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
+GL E I+ +P +++ Q N CS+CL +F+E + R +P+C H FH
Sbjct: 100 RGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHI 159
Query: 239 ECVDKWLTRNGSCPVCRECV 258
+C+D WL N +CP+CR V
Sbjct: 160 DCIDIWLQGNANCPLCRTSV 179
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECV 258
CS+CL +FEE D R LP CGH FH +C+D W SCP+CR V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
GLS+D+ + LP ++ E N+ CS+CL ++ + +++PSCGH FH EC+D W
Sbjct: 72 GLSKDIREMLP-IVIYKESFTV--NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 128
Query: 245 LTRNGSCPVCR 255
LT + +CP+CR
Sbjct: 129 LTSHTTCPLCR 139
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 211 IGCSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCR 255
+ C++CL + E+G+ AR LP CGH FH+ECVD WL + +CP+CR
Sbjct: 132 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 169 TAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARK 228
TA V GL + I+ + L + N I C ICL ++ ++ R
Sbjct: 209 TARNTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRC 268
Query: 229 LPSCGHCFHSECVDKWLTRNGSCPVCRE 256
+P C HCFH +C+D+WL + SCPVCR
Sbjct: 269 MPECDHCFHVQCIDEWLKIHSSCPVCRN 296
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 178 YDVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFH 237
++V+ GL E +I K+ C + + CS+CL +F +G+S R LP C H FH
Sbjct: 124 WNVSPPSGLDETLINKITVCKYRRGD--GFVHTTDCSVCLGEFSDGESLRLLPRCSHAFH 181
Query: 238 SECVDKWLTRNGSCPVCR 255
+C+D WL + +CP+CR
Sbjct: 182 QQCIDTWLKSHSNCPLCR 199
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 178 YDVTGVKGLSEDMIQKLPECALHSEELIQLDNEIG---------CSICLEKFEEGDSARK 228
Y GL + +I+ LP L+S +G C++CL +FEEGD R
Sbjct: 113 YSSYSPYGLDDSVIKTLP-LFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRT 171
Query: 229 LPSCGHCFHSECVDKWLTRNGSCPVCRECV 258
LP C H FH EC+D+WL + +CP+CR +
Sbjct: 172 LPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 163 QVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEE 222
+ S +T R++ ++ + GL + +I LP +E+ C++CL +F E
Sbjct: 97 EFSDSDTYQRQLQQLFHLHD-SGLDQALIDALP--VFLYKEIKGTKEPFDCAVCLCEFSE 153
Query: 223 GDSARKLPSCGHCFHSECVDKWLTRNGSCPVCR 255
D R LP+C H FH +C+D WL N +CP+CR
Sbjct: 154 DDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 184 KGLSEDMIQKLPECALHSEELIQLDNEIG---CSICLEKFEEGDSARKLPSCGHCFHSEC 240
+GL +I LP ++ + N++ C++CL EE D+AR LP+C H FH C
Sbjct: 74 RGLDSLVIASLPTF------VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSC 127
Query: 241 VDKWLTRNGSCPVCR 255
VD WLT +CPVCR
Sbjct: 128 VDTWLTTQSTCPVCR 142
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECV 258
CSICL + +GD AR LP C H FH EC+D W + +CP+CR V
Sbjct: 127 CSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>sp|Q9M0C3|ATL14_ARATH RING-H2 finger protein ATL14 OS=Arabidopsis thaliana GN=ATL14 PE=2
SV=1
Length = 176
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIG---CSICLEKFEEGDSARKLPSCGHCFHSECV 241
GLS +++LP+ + + +E G C +C++ F +G RKLP CGH FH +CV
Sbjct: 89 GLSPRCVKRLPQ-----FKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCV 143
Query: 242 DKWLTRNGSCPVCRECV 258
D WL + +CP+CR+ V
Sbjct: 144 DLWLIKVSTCPICRDRV 160
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 184 KGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDK 243
+GL ++ LP + + NE C ICL FEEG++ + +P CGH FH +CVD
Sbjct: 114 RGLDSQAVRSLP--VYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCGHVFHVDCVDT 170
Query: 244 WLTRNGSCPVCR 255
WL+ +CP+CR
Sbjct: 171 WLSSYVTCPLCR 182
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 179 DVTGVKGLSEDMIQKLPECALHSEELIQLDNEIG--CSICLEKFEEGDSARKLPSCGHCF 236
D ++GL+++ I L + S E +D+E+G CS+C+ + G+ R+LP C H F
Sbjct: 581 DDDPIRGLTKEQIDNL---STRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLP-CLHEF 636
Query: 237 HSECVDKWLTRNGSCPVCRECVCK 260
H C+D+WL+ N +CPVCR V +
Sbjct: 637 HIHCIDRWLSENCTCPVCRRPVLE 660
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 179 DVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
D +GL+++ I L + + ++ CS+C+ ++ EG+ RKLP C H +H
Sbjct: 541 DDDQPRGLTKEQIDNLAMRSFGENDALKT-----CSVCITEYTEGNKLRKLP-CSHEYHV 594
Query: 239 ECVDKWLTRNGSCPVCRECV 258
C+D+WL+ N +CP+CR V
Sbjct: 595 HCIDRWLSENSTCPICRRAV 614
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 179 DVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
D +GL+++ I L + + ++ CS+C+ ++ EG+ RKLP C H +H
Sbjct: 517 DEDQPRGLTKEQIDNLAMRSFGENDALKT-----CSVCITEYTEGNKLRKLP-CSHEYHV 570
Query: 239 ECVDKWLTRNGSCPVCRECV 258
C+D+WL+ N +CP+CR V
Sbjct: 571 HCIDRWLSENSTCPICRRAV 590
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 184 KGLSEDMIQKLPECALHSE-ELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVD 242
KG+ + ++ P + E L LD E C ICL F G+ R LP C H FH C+D
Sbjct: 107 KGIKKKALRMFPVVSYSPEMNLPGLDEE--CVICLSDFVSGEQLRLLPKCNHGFHVRCID 164
Query: 243 KWLTRNGSCPVCRECV 258
KWL ++ +CP CR C+
Sbjct: 165 KWLQQHLTCPKCRNCL 180
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 184 KGLSEDMIQKLPECALHSEELIQL-DNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVD 242
+GL +D+I P + +++ + C+ICL +FE+ ++ R +P C H FH+ C+D
Sbjct: 98 RGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCID 157
Query: 243 KWLTRNGSCPVCR 255
WL+ +CPVCR
Sbjct: 158 VWLSSRSTCPVCR 170
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 163 QVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQL----------DNEIG 212
++ST + R++ ++ + GL + I LP H +E++
Sbjct: 86 EISTSDALQRQLQQLFHLND-SGLDQAFIDALP--VFHYKEIVGSAGGGGGNGAAQEPFD 142
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCR 255
C++CL +F E D R LP C H FH C+D WL N +CP+CR
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 185 GLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDKW 244
GL + I+ LP + L L + CS+CL KFE+ + R LP C H FH C+D+W
Sbjct: 98 GLDKKAIESLPFFRFSA--LKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQW 155
Query: 245 LTRNGSCPVCRECVCKDTD 263
L ++ +CP+CR V + D
Sbjct: 156 LEQHATCPLCRNRVNIEDD 174
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 157 RFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQLDN-EIGCSI 215
R + V+ L+ +++ ++D G+ + I LP H + +I L N C++
Sbjct: 83 REDYFDNVTALQGQLQQLFHLHD----SGVDQSFIDTLP--VFHYKSIIGLKNYPFDCAV 136
Query: 216 CLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCR 255
CL +FE D R LP C H FH +C+D WL + +CP+CR
Sbjct: 137 CLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 157 RFFFLFQVSTLETAYREVSDVYDVTGVKGLSEDMIQKLPECALHSEELIQLD-NEIGCSI 215
R + V+ L+ +++ +++D G+ + +I LP H + ++ L + C +
Sbjct: 75 REDYFDNVTALQGQLQQLFNLHD----SGVDQSLIDTLP--VFHYKSIVGLKISPFDCPV 128
Query: 216 CLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCR 255
CL +FE D R LP C H FH EC+D WL + +CP+CR
Sbjct: 129 CLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 179 DVTGVKGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHS 238
D +GL+++ I L + ++ CS+C+ ++ EG+ RKLP C H +H
Sbjct: 539 DDDQPRGLTKEQIDNLSTRNFGENDALKT-----CSVCITEYTEGNKLRKLP-CSHEYHI 592
Query: 239 ECVDKWLTRNGSCPVCRECV 258
C+D+WL+ N +CP+CR V
Sbjct: 593 HCIDRWLSENSTCPICRRAV 612
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECV 258
CS+C+ ++ EG+ RKLP C H +H C+D+WL+ N +CP+CR V
Sbjct: 703 CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICRRAV 747
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 211 IGCSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECVCKDTDT 264
+ CS+CL KFE + R LP C H FH C+D+WL ++ +CP+CR+ V + D+
Sbjct: 121 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDS 174
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTRNGSCPVCRECV 258
CS+C+ ++ EG+ RKLP C H +H C+D+WL+ N +CP+CR V
Sbjct: 585 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICRRAV 629
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 184 KGLSEDMIQKLPECALHSEELIQLDNEIGCSICLEKFEEGDSARKLPSCGHCFHSECVDK 243
+GL+ +I LP + + + + + C++CL +E D AR+LP+C H FH +CVD
Sbjct: 80 RGLNPTVIASLPTFTVGATDGVAA-SATECAVCLSVLKEQDKARELPNCKHIFHVDCVDT 138
Query: 244 WLTRNGSCPVCR 255
WLT +CPVCR
Sbjct: 139 WLTTCSTCPVCR 150
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 184 KGLSEDMIQKLPECALHSEELIQLDNE-IGCSICLEKFEEGDSARKLPSCGHCFHSECVD 242
+G+ +D+I+ P + ++ N + C+ICL +FE+ + R +P C H FH+ C+D
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 243 KWLTRNGSCPVCR 255
+WL+ +CPVCR
Sbjct: 150 EWLSSRSTCPVCR 162
>sp|P87237|YC0C_SCHPO Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC4G3.12c PE=4 SV=1
Length = 821
Score = 63.5 bits (153), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 213 CSICLEKFEEGDSARKLPSCGHCFHSECVDKWLTR-NGSCPVCR 255
C ICLE + GD RKL +C H FH C+D+WLT N SCP+CR
Sbjct: 766 CLICLETYTNGDICRKLQACKHFFHQACIDQWLTTGNNSCPLCR 809
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 176 DVYDVTGVKGLSEDMIQKLPECALHSEELIQL-DNEIGCSICLEKFEEGDSARKLPSCGH 234
DV +GL +++I+ P + +++ + C+ICL +FE+ ++ R +P C H
Sbjct: 85 DVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSH 144
Query: 235 CFHSECVDKWLTRNGSCPVCR 255
FH+ C+D WL+ +CPVCR
Sbjct: 145 TFHANCIDVWLSSWSTCPVCR 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,428,837
Number of Sequences: 539616
Number of extensions: 3553501
Number of successful extensions: 14241
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 338
Number of HSP's that attempted gapping in prelim test: 13675
Number of HSP's gapped (non-prelim): 786
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)