BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024606
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
168) GN=purU PE=3 SV=2
Length = 300
Score = 174 bits (441), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 150/271 (55%), Gaps = 46/271 (16%)
Query: 2 FSCP--RKRMSSIPGDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGW 59
F C R++ SS+ F +++ F+ S+ ++ +VA+ SK+ HCL + ++ W
Sbjct: 68 FDCAGIREKKSSLQAAFASVAEKFDMTWSLTLASELK---RVAIFVSKELHCLHELIWEW 124
Query: 60 QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN---EREEELLELVQ--N 114
Q G L EI VISNH+ +ER IP+HY+ A ++ E E++ LEL++ +
Sbjct: 125 QTGNLMAEIAVVISNHEEAR-----ELVERLNIPFHYMKANKDIRAEVEKKQLELLEQYD 179
Query: 115 TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHH 174
D +VLARYMQ IL+ F+ ++ +INIHH
Sbjct: 180 VDVIVLARYMQ------------------------------ILTPDFVSAHPNRIINIHH 209
Query: 175 GLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKS 234
LP+F G P K+A++ GVKLIGATSH+VT +LD GPIIEQ +ERV HRDN
Sbjct: 210 SFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIEQDIERVDHRDNAEALKNIG 269
Query: 235 EDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265
+E+ LA+A+K + E RV+ +E NKT+VF
Sbjct: 270 RTIERSVLARAVKWHLEDRVIVHE-NKTIVF 299
>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=purU PE=3 SV=1
Length = 284
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 141/251 (56%), Gaps = 42/251 (16%)
Query: 20 SKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP 79
S++ +++ ++ D ++A+ SKQ+HCL+D L+ W+ G+L EI +ISNH P
Sbjct: 70 SQLAEQLQATWQIHFSDQLPRLALWVSKQDHCLLDILWRWRSGELRCEIPLIISNH---P 126
Query: 80 NSHVIRFLERHGIPYHYL-CAKENEREEELLELV----QNTDFLVLARYMQPVPLQKEAY 134
+ I ++ GI +H L KEN+ +E EL D +VLA+Y+Q
Sbjct: 127 DLKSIA--DQFGIDFHCLPITKENKLAQETAELALLKQYQIDLVVLAKYLQ--------- 175
Query: 135 LGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGV 194
IL+ F+ + ++INIHH LP+F G P +A + GV
Sbjct: 176 ---------------------ILTTDFVVQF-PNIINIHHSFLPAFPGANPYHRAHERGV 213
Query: 195 KLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 254
K+IGAT+H+ T +LD GPIIEQ V RVSHRDN+ ++K D+E+ LA+A++ + + R+
Sbjct: 214 KIIGATAHYATAQLDEGPIIEQDVVRVSHRDNVDDLIRKGRDLERVVLARAVRLHLQHRI 273
Query: 255 LPYEMNKTVVF 265
L Y+ N+TVVF
Sbjct: 274 LVYD-NRTVVF 283
>sp|P0A5T6|PURU_MYCTU Formyltetrahydrofolate deformylase OS=Mycobacterium tuberculosis
GN=purU PE=3 SV=1
Length = 310
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 132/235 (56%), Gaps = 45/235 (19%)
Query: 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPY 94
PK +VA++AS ++HCL+D L+ + G+L + + VI+NH P+ +HV F G+P+
Sbjct: 115 PK-RVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANH---PDLAAHVRPF----GVPF 166
Query: 95 HYLCAKENEREE----ELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLT 150
++ A + R E +L L N D +VLARYMQ
Sbjct: 167 IHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ------------------------- 201
Query: 151 SYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDA 210
ILS FL + G +INIHH LP+F G P ++A + GVKLIGAT+H+VTE LD
Sbjct: 202 -----ILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDE 256
Query: 211 GPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265
GPIIEQ V RV H + V+ DVE+ L++A+ +C+ RV+ + N+T+VF
Sbjct: 257 GPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHH-NQTIVF 310
>sp|P0A5T7|PURU_MYCBO Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=purU PE=3 SV=1
Length = 310
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 132/235 (56%), Gaps = 45/235 (19%)
Query: 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPY 94
PK +VA++AS ++HCL+D L+ + G+L + + VI+NH P+ +HV F G+P+
Sbjct: 115 PK-RVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANH---PDLAAHVRPF----GVPF 166
Query: 95 HYLCAKENEREE----ELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLT 150
++ A + R E +L L N D +VLARYMQ
Sbjct: 167 IHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ------------------------- 201
Query: 151 SYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDA 210
ILS FL + G +INIHH LP+F G P ++A + GVKLIGAT+H+VTE LD
Sbjct: 202 -----ILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDE 256
Query: 211 GPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265
GPIIEQ V RV H + V+ DVE+ L++A+ +C+ RV+ + N+T+VF
Sbjct: 257 GPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHH-NQTIVF 310
>sp|Q46339|PURU_CORS1 Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain
P-1) GN=purU PE=3 SV=1
Length = 286
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 122/233 (52%), Gaps = 41/233 (17%)
Query: 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 97
K KV ++ SK EHCL D L+ G LP+E+ V SNH P+ + +E +GI +H++
Sbjct: 89 KTKVLIMVSKFEHCLQDLLFRMHSGDLPIEVVGVASNH---PDHRSL--VEWYGIGFHHI 143
Query: 98 CAKENER---EEELLELVQNT--DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 152
++ + E LLEL+ T + +VLARYMQ L+ +
Sbjct: 144 PISKDTKPRAEAALLELIDQTGAELVVLARYMQ----------------------VLSDH 181
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
L+GK INIHH LPSFKG KP QA++ GVK +GAT+H+V ELD GP
Sbjct: 182 LASELTGK--------TINIHHSFLPSFKGAKPYHQAWERGVKTVGATAHYVNSELDEGP 233
Query: 213 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265
II Q V V H + V D E + L+ A++ +CE RV Y N+TVV
Sbjct: 234 IIAQQVVEVDHTYGPQDLVAAGRDSECKALSNAVRWHCEGRVFLYG-NRTVVL 285
>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
SV=2
Length = 278
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 119/232 (51%), Gaps = 43/232 (18%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 99
++ +L +K+ HCL D L G L VEI VI NHD ++ +ER IP+H L +
Sbjct: 84 RIVILVTKEAHCLGDILMKNYYGALDVEIAAVIGNHD-----NLRELVERFNIPFH-LVS 137
Query: 100 KEN----EREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF 153
EN E ++ L E + D++VLA+YM+
Sbjct: 138 HENLTRVEHDKLLAEKIDEYTPDYIVLAKYMR---------------------------- 169
Query: 154 NMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPI 213
+L+ +F+ Y VINIHH LP+F G KP +QA+ GVK+IGAT+HF+ ELD GPI
Sbjct: 170 --VLNPEFVARYPNRVINIHHSFLPAFIGAKPYQQAYKRGVKIIGATAHFINNELDQGPI 227
Query: 214 IEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265
I Q V V H N ++ DVEK L++A+ R+ Y+ NKTVV
Sbjct: 228 IMQNVINVDHTYNAEAMMRAGRDVEKTVLSRALDLALHDRIFVYK-NKTVVL 278
>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
PE=3 SV=1
Length = 280
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 42/266 (15%)
Query: 6 RKRMSSIPGDFFKLSKMFNAM-RSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKL 64
R + I D L+ + +A+ VR + + ++ +L +K+ HCL D L G L
Sbjct: 51 RTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGL 110
Query: 65 PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLV 119
VEI VI NHD + +ER IP+ + + NE ++++ + + D++V
Sbjct: 111 DVEIAAVIGNHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVV 165
Query: 120 LARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPS 179
LA+YM+ +L+ +F+ + +INIHH LP+
Sbjct: 166 LAKYMR------------------------------VLTPEFVARFPNKIINIHHSFLPA 195
Query: 180 FKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK 239
F G +P QA++ GVK+IGAT+H+V + LD GPII Q V V H ++ DVEK
Sbjct: 196 FIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEK 255
Query: 240 QCLAKAIKSYCELRVLPYEMNKTVVF 265
L++A+ RV Y N+T++
Sbjct: 256 NVLSRALYKVLAQRVFVYG-NRTIIL 280
>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
Length = 280
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 42/266 (15%)
Query: 6 RKRMSSIPGDFFKLSKMFNAM-RSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKL 64
R + I D L+ + +A+ VR + + ++ +L +K+ HCL D L G L
Sbjct: 51 RTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGL 110
Query: 65 PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLV 119
VEI VI NHD + +ER IP+ + + NE ++++ + + D++V
Sbjct: 111 DVEIAAVIGNHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVV 165
Query: 120 LARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPS 179
LA+YM+ +L+ +F+ + +INIHH LP+
Sbjct: 166 LAKYMR------------------------------VLTPEFVARFPNKIINIHHSFLPA 195
Query: 180 FKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK 239
F G +P QA++ GVK+IGAT+H+V + LD GPII Q V V H ++ DVEK
Sbjct: 196 FIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEK 255
Query: 240 QCLAKAIKSYCELRVLPYEMNKTVVF 265
L++A+ RV Y N+T++
Sbjct: 256 NVLSRALYKVLAQRVFVYG-NRTIIL 280
>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
GN=purU PE=1 SV=1
Length = 280
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 42/266 (15%)
Query: 6 RKRMSSIPGDFFKLSKMFNAM-RSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKL 64
R + I D L+ + +A+ VR + + ++ +L +K+ HCL D L G L
Sbjct: 51 RTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGL 110
Query: 65 PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLV 119
VEI VI NHD + +ER IP+ + + NE ++++ + + D++V
Sbjct: 111 DVEIAAVIGNHDT-----LRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVV 165
Query: 120 LARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPS 179
LA+YM+ +L+ +F+ + +INIHH LP+
Sbjct: 166 LAKYMR------------------------------VLTPEFVARFPNKIINIHHSFLPA 195
Query: 180 FKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK 239
F G +P QA++ GVK+IGAT+H+V + LD GPII Q V V H ++ DVEK
Sbjct: 196 FIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEK 255
Query: 240 QCLAKAIKSYCELRVLPYEMNKTVVF 265
L++A+ RV Y N+T++
Sbjct: 256 NVLSRALYKVLAQRVFVYG-NRTIIL 280
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus
gallus GN=GART PE=2 SV=1
Length = 1003
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 97
K KVAVL S L + ++ EI V+SN +R ER GIP +
Sbjct: 803 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK---AGVEGLRKAERAGIPTRVI 859
Query: 98 CAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 157
K+ E V ++LE S + + F IL
Sbjct: 860 DHKQYGSRTEFDSAVD------------------------RVLEEFSVELICLAGFMRIL 895
Query: 158 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQM 217
SG F++ + ++NIH LLPSFKG K +AGV++ G T HFV EE+DAG II Q
Sbjct: 896 SGPFVKKWEGKILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGAIIFQE 955
Query: 218 VERVSHRDNLRTFVQKSEDVEKQCLAKAIK 247
V D + T ++ ++ E + A++
Sbjct: 956 AVPVKIGDTVETLSERVKEAEHRAFPAALQ 985
>sp|Q59A32|PUR2_BOVIN Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus
GN=GART PE=2 SV=1
Length = 1010
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 138 KLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLI 197
++LE S+ + F ILSG F+R + ++NIH LLPSFKG +Q DAGV +
Sbjct: 880 EVLEEFSTDIVCLAGFMRILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQVLDAGVTVT 939
Query: 198 GATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 247
G T HFV E++DAG II Q V D + T ++ + E + A++
Sbjct: 940 GCTVHFVAEDVDAGQIILQEAVPVKRGDTVETLSERVKLAEHKIFPSALQ 989
>sp|P12040|PUR3_BACSU Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis
(strain 168) GN=purN PE=3 SV=2
Length = 195
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 148 SLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEE 207
+L Y +I L++YG +INIH LLP+F G QAF AGVK+ G T H+V E
Sbjct: 85 ALAGYMRLI-GDTLLQAYGGKIINIHPSLLPAFPGIDAVGQAFRAGVKVAGITVHYVDEG 143
Query: 208 LDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCEL 252
+D GPII Q + D L T Q+ +E + IK L
Sbjct: 144 MDTGPIIAQKAIEIDEHDTLETIEQRIHKLEHKWYPSVIKQLLGL 188
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 OS=Mus
musculus GN=Gart PE=2 SV=3
Length = 1010
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%)
Query: 139 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 198
+LE S + F ILSG F+R + ++NIH LLPSFKG +Q +AGV + G
Sbjct: 881 VLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQVLEAGVTITG 940
Query: 199 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 247
T HFV E++DAG II Q V D + T ++ + E + A++
Sbjct: 941 CTVHFVAEDVDAGQIILQEAVPVRRGDTVATLSERVKVAEHKIFPAALQ 989
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo
sapiens GN=GART PE=1 SV=1
Length = 1010
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 139 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 198
+LE S + F ILSG F++ + ++NIH LLPSFKG +QA + GV + G
Sbjct: 881 VLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTG 940
Query: 199 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 247
T HFV E++DAG II Q V D + T ++ + E + A++
Sbjct: 941 CTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQ 989
>sp|P43846|PUR3_HAEIN Phosphoribosylglycinamide formyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purN PE=3 SV=1
Length = 212
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 99
K+AVL S Q L + G +P +I CVISN +++ + ++ IP
Sbjct: 3 KIAVLISGQGTNLQTIIDACHSGDIPAKIACVISNK---ADAYGLVRAKQAQIPQAVFLR 59
Query: 100 KENEREEELLELVQN------TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF 153
K E+ + + + D +VLA YM+
Sbjct: 60 KNFSNNLEMDDAIGDYLQSLAVDLIVLAGYMK---------------------------- 91
Query: 154 NMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPI 213
IL+ KF + + ++NIH LLP + G ++A +AG G T HFV EE+D G I
Sbjct: 92 --ILTPKFTQRFAGKILNIHPSLLPKYAGLNTYQRAIEAGDNEHGTTVHFVNEEVDGGAI 149
Query: 214 IEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 254
+ Q + D++ ++ + E Q IK + E R+
Sbjct: 150 VLQAKVPIFPEDSIEEVEARTREQEYQIYPLVIKWFTEGRL 190
>sp|Q9K9Y6|FMT_BACHD Methionyl-tRNA formyltransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=fmt PE=3 SV=1
Length = 317
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 124 MQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 183
+QP ++ EA L + L S +T+ F IL L IN+H LLP ++GG
Sbjct: 60 LQPEKIRDEAEL--ERLFSFEPDLIVTAAFGQILPNALLEYPKHGCINVHASLLPKYRGG 117
Query: 184 KPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLA 243
P QA G K G T ++ E+LDAG I+ Q+ ++ D++ + K + LA
Sbjct: 118 APIHQAIIDGEKETGITIMYMAEKLDAGDILTQVTVPIADDDHVGSLHNKLSEAGAALLA 177
Query: 244 KAIKSYC--ELRVLPYE 258
K I EL+ +P +
Sbjct: 178 KTIPPLIKGELQSIPQD 194
>sp|Q5HPX5|FMT_STAEQ Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=fmt PE=3 SV=1
Length = 310
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 139 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 198
+L SL S +T+ F +L L + IN+H LLP ++GG P QA G + G
Sbjct: 73 VLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETG 132
Query: 199 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCE 251
T ++ ++LDAG II Q R+ DN+ T K + + L K + S +
Sbjct: 133 ITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIID 185
>sp|O67890|FMT_AQUAE Methionyl-tRNA formyltransferase OS=Aquifex aeolicus (strain VF5)
GN=fmt PE=3 SV=1
Length = 303
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 139 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 198
L+E L + + IL + L IN+H LLP ++G P ++A AG K G
Sbjct: 71 LVEELKPDCIVVVAYGKILPKEVLDLPPYKTINLHASLLPKYRGAAPIQRAIMAGEKETG 130
Query: 199 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYE 258
T V EE+DAG I+ Q + DN T +K + L ++ + E +V P
Sbjct: 131 NTVMLVNEEMDAGDILAQEKIPIEEEDNFLTLSEKLAKSGAKLLVNTLRLWFEGKVKPVP 190
Query: 259 MN 260
N
Sbjct: 191 QN 192
>sp|Q8CSW1|FMT_STAES Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=fmt PE=3 SV=1
Length = 310
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 149 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 208
+T+ F +L L + IN+H LLP ++GG P QA G + G T ++ ++L
Sbjct: 83 VTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETGITIMYMVKKL 142
Query: 209 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCE 251
DAG II Q R+ DN+ T K + + L K + S +
Sbjct: 143 DAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIID 185
>sp|P00967|PUR2_DROME Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
melanogaster GN=ade3 PE=1 SV=2
Length = 1353
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
F +LS F+R + ++NIH LLP + G KQA +AG K G T HFV E +D G
Sbjct: 1243 FMRVLSAPFVREWRGRLVNIHPSLLPKYPGLHVQKQALEAGEKESGCTVHFVDEGVDTGA 1302
Query: 213 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 246
II Q + D+ + Q+ E +A+
Sbjct: 1303 IIVQAAVPILPDDDEDSLTQRIHKAEHWAFPRAL 1336
>sp|B5YIL6|FMT_THEYD Methionyl-tRNA formyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=fmt PE=3 SV=1
Length = 308
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 125 QPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 184
QP ++ + ++ K L+SL+ + ++ + IL + L IN+H LLP ++G
Sbjct: 63 QPEKMKDDNFI--KKLKSLNPEFAIVVAYGKILPKEILEIPKHGCINLHASLLPKYRGAA 120
Query: 185 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAK 244
P + A G K+ G T+ + E LD GPI+ Q ++ DN T +K V + + +
Sbjct: 121 PIQWALINGEKITGVTTMIIDEGLDTGPILLQKEISINDEDNAETLSEKLSVVGAELIIE 180
Query: 245 AI 246
I
Sbjct: 181 TI 182
>sp|P64138|FMT_STRA5 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=fmt PE=3
SV=1
Length = 311
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 140 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGA 199
L +L + G +T+ F L K L S G IN+H LLP ++GG P A G K G
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAPIHYAIINGEKEAGV 134
Query: 200 TSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEM 259
T + ++DAG ++ + ++ DN+ T + V + L + Y + P
Sbjct: 135 TIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQ 194
Query: 260 NK 261
N+
Sbjct: 195 NE 196
>sp|P64137|FMT_STRA3 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=fmt PE=3 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 140 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGA 199
L +L + G +T+ F L K L S G IN+H LLP ++GG P A G K G
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAPIHYAIINGEKEAGV 134
Query: 200 TSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEM 259
T + ++DAG ++ + ++ DN+ T + V + L + Y + P
Sbjct: 135 TIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQ 194
Query: 260 NK 261
N+
Sbjct: 195 NE 196
>sp|Q3K365|FMT_STRA1 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=fmt PE=3 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 140 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGA 199
L +L + G +T+ F L K L S G IN+H LLP ++GG P A G K G
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAPIHYAIINGEKEAGV 134
Query: 200 TSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEM 259
T + ++DAG ++ + ++ DN+ T + V + L + Y + P
Sbjct: 135 TIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQ 194
Query: 260 NK 261
N+
Sbjct: 195 NE 196
>sp|P16340|PUR2_DROPS Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
pseudoobscura pseudoobscura GN=ade3 PE=3 SV=2
Length = 1364
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 37 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH--- 90
P+ +VAVL S + L+D + +G + EI VISN + LER
Sbjct: 1154 PRKRVAVLISGKGSNLQALIDAIRDSAQG-VYAEIVLVISNKAG------VLGLERAAKA 1206
Query: 91 GIPYHYLCAKE-NEREEELLELVQN-----TDFLVLARYMQPVPLQKEAYLGYKLLESLS 144
GIP + K+ RE +EL ++ +F+ LA +M+
Sbjct: 1207 GIPSMVISHKDFPSREVYDVELTRHLKTARVEFICLAGFMR------------------- 1247
Query: 145 SKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFV 204
ILS F+R + +INIH LLP F G KQA +AG G T H+V
Sbjct: 1248 -----------ILSVPFVREWRGRLINIHPSLLPKFPGLHVQKQALEAGETESGCTVHYV 1296
Query: 205 TEELDAGPIIEQMVERVSHRDNLRTFVQK 233
E +D G II Q + D+ T Q+
Sbjct: 1297 DEGVDTGAIIVQAAVPILPGDDEETLTQR 1325
>sp|B9DPM5|FMT_STACT Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=fmt PE=3 SV=1
Length = 310
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 105 EEELLELVQNTDFLV-LARYMQPVPLQK-------EAYLGYKLLES--------LSSKGS 148
EE+++ +V D V R M P P+++ E Y K+ +S +
Sbjct: 23 EEDVIAVVTQPDRPVGRKRVMTPPPVKEVALENGIEVYQPEKISQSDDLQTLIDMEPDLI 82
Query: 149 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 208
+T+ F IL L + IN+H LLP ++GG P QA G K G T ++ +L
Sbjct: 83 VTAAFGQILPKSLLDAPKLGAINVHASLLPKYRGGAPIHQAIIDGEKETGVTIMYMAPKL 142
Query: 209 DAGPIIEQMVERVSHRDNLRTFVQK 233
DAG II Q + DN+ + K
Sbjct: 143 DAGDIISQQAIEIEANDNVESMHDK 167
>sp|A8Z3Q2|FMT_STAAT Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=fmt PE=3 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A6QGB6|FMT_STAAE Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Newman) GN=fmt PE=3 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q5HGL6|FMT_STAAC Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
COL) GN=fmt PE=3 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q2FZ68|FMT_STAA8 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
NCTC 8325) GN=fmt PE=3 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q2FHM2|FMT_STAA3 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
USA300) GN=fmt PE=3 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q5HH12|PUR3_STAAC Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain COL) GN=purN PE=3 SV=1
Length = 188
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 40/184 (21%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 99 AKENER----EEELLELVQN--TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 152
K+ + E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGE 149
Query: 213 IIEQ 216
IIEQ
Sbjct: 150 IIEQ 153
>sp|B1HQE4|FMT_LYSSC Methionyl-tRNA formyltransferase OS=Lysinibacillus sphaericus
(strain C3-41) GN=fmt PE=3 SV=1
Length = 313
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 122 RYMQPVPLQKEAY-LGYKLLESLSSKGS--------------LTSYFNMILSGKFLRSYG 166
R + P P++ A LG +++ +GS +T+ F IL + L +
Sbjct: 42 RILTPPPVKAAALELGLPIIQPEKLRGSEELQQILSLQPDIVITAAFGQILPKELLDAPS 101
Query: 167 KDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 216
IN+H LLP ++GG P QA G K G T ++ E+LDAG II Q
Sbjct: 102 LGCINVHASLLPKYRGGAPIHQAIIDGEKETGVTIMYMAEKLDAGDIISQ 151
>sp|Q6GI12|PUR3_STAAR Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MRSA252) GN=purN PE=3 SV=1
Length = 188
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 40/184 (21%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 99 AKE----NEREEELLELVQN--TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 152
K+ E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFGSKAAYEQHLVTLLNEDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGE 149
Query: 213 IIEQ 216
IIEQ
Sbjct: 150 IIEQ 153
>sp|Q8NX18|FMT_STAAW Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MW2) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q6G9Z7|FMT_STAAS Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q6GHL9|FMT_STAAR Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|P99127|FMT_STAAN Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
N315) GN=fmt PE=1 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|P64136|FMT_STAAM Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=fmt PE=1 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A5ISA1|FMT_STAA9 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
JH9) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A6U135|FMT_STAA2 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
JH1) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A7X1H4|FMT_STAA1 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q2YXK0|FMT_STAAB Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 122 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 165
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 166 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 225
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 226 NLRTFVQK----SEDVEKQCLAKAIKSYCE 251
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|B9DV45|FMT_STRU0 Methionyl-tRNA formyltransferase OS=Streptococcus uberis (strain
ATCC BAA-854 / 0140J) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 130 QKEAYLGYKLLES---LSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 186
Q E G + LES L + G +T+ F L K L S +N+H LLP ++GG P
Sbjct: 63 QPEKLSGSQELESIMSLDADGIVTAAFGQFLPTKLLDSV-TFAVNVHASLLPKYRGGAPI 121
Query: 187 KQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 246
A G + G T + +E+DAG +I + + DN+ T K + + L K +
Sbjct: 122 HYALINGEEEAGVTIMEMVKEMDAGDMIAKASTPILEDDNVGTMFDKLAILGRDLLIKTL 181
Query: 247 KSYCELRVLPYEMN 260
Y ++ P N
Sbjct: 182 PDYLSGQLKPVAQN 195
>sp|Q5WFK7|FMT_BACSK Methionyl-tRNA formyltransferase OS=Bacillus clausii (strain
KSM-K16) GN=fmt PE=3 SV=1
Length = 312
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 149 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 208
+T+ + I+ L + IN+H LLP ++GG P QA G K G + ++ E+L
Sbjct: 80 VTAAYGQIVPKAVLDAPPYGCINVHASLLPKYRGGAPIHQAIIDGEKQTGISIMYMAEKL 139
Query: 209 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 246
DAG ++ Q ++ D+++T K V L K I
Sbjct: 140 DAGAVLSQQAVAITDEDDVQTMHDKLSAVGADLLEKTI 177
>sp|Q92AI5|FMT_LISIN Methionyl-tRNA formyltransferase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=fmt PE=3 SV=1
Length = 312
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%)
Query: 122 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 166
R + P P++K A Y KL L SL + +T+ + IL L S
Sbjct: 41 RILTPPPVKKAALELGIPVYQPEKLRTSSELEELISLEADLLVTAAYGQILPNTLLESPK 100
Query: 167 KDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDN 226
IN+H LLP ++GG P A G G T ++ E+LDAG +I Q ++ DN
Sbjct: 101 HGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITEEDN 160
Query: 227 LRTFVQKSEDVEKQCLAKAIKSYCELRV 254
T K + + L + + ++
Sbjct: 161 TGTMFDKLSKLGAELLMDTLPDFLAGKI 188
>sp|Q8NX89|PUR3_STAAW Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MW2) GN=purN PE=3 SV=1
Length = 188
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 40/184 (21%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 99 AKENER----EEELLELVQN--TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 152
K+ + E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFDSKAAYEQHLVSLLNEDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGE 149
Query: 213 IIEQ 216
IIEQ
Sbjct: 150 IIEQ 153
>sp|Q6GAE1|PUR3_STAAS Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MSSA476) GN=purN PE=3 SV=1
Length = 188
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 40/184 (21%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 99 AKENER----EEELLELVQN--TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 152
K+ + E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFDSKAAYEQHLVSLLNEDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGE 149
Query: 213 IIEQ 216
IIEQ
Sbjct: 150 IIEQ 153
>sp|P52423|PUR3_VIGUN Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna
unguiculata GN=PUR3 PE=2 SV=2
Length = 312
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 44/229 (19%)
Query: 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HY 96
+ K+AV S ++G L ++T +++N + R +GIP +
Sbjct: 98 RKKLAVFVSGGGSNFRSIHEASKKGSLHGDVTVLVTNKSECGGAQYAR---NNGIPVILF 154
Query: 97 LCAKENEREEELLELVQN-----TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTS 151
AK+ + +LV DF++LA Y++ +P++
Sbjct: 155 PKAKDEPKGLSPCDLVDTLRKFEVDFVLLAGYLKLIPVE--------------------- 193
Query: 152 YFNMILSGKFLRSYGKDVINIHHGLLPSFKGG-----KPAKQAFDAGVKLIGATSHFVTE 206
+R++ + + NIH LLP+F G K K +G + G T HFV E
Sbjct: 194 ---------LIRAFERSIFNIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHFVDE 244
Query: 207 ELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVL 255
D G I+ Q V V D + + E Q + +++ CE R++
Sbjct: 245 HYDTGRILAQRVVPVLANDTAEELAARVLNEEHQLYVEVVEALCEERIV 293
>sp|P99162|PUR3_STAAN Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain N315) GN=purN PE=1 SV=1
Length = 188
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 40/184 (21%)
Query: 40 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 99 AKENER----EEELLELVQN--TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 152
K+ + E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 153 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 212
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGE 149
Query: 213 IIEQ 216
IIEQ
Sbjct: 150 IIEQ 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,359,862
Number of Sequences: 539616
Number of extensions: 4206494
Number of successful extensions: 11553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 10789
Number of HSP's gapped (non-prelim): 785
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)