Query 024606
Match_columns 265
No_of_seqs 227 out of 1637
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 11:12:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n0v_A Formyltetrahydrofolate 100.0 6.2E-53 2.1E-57 387.3 26.3 219 8-265 63-286 (286)
2 3lou_A Formyltetrahydrofolate 100.0 5.7E-53 2E-57 388.5 24.8 219 8-265 68-291 (292)
3 3nrb_A Formyltetrahydrofolate 100.0 2.4E-53 8.2E-58 390.2 21.5 225 3-265 56-285 (287)
4 3o1l_A Formyltetrahydrofolate 100.0 1.1E-52 3.6E-57 388.3 25.2 219 8-265 78-301 (302)
5 3obi_A Formyltetrahydrofolate 100.0 9.4E-53 3.2E-57 386.4 21.2 226 2-265 54-286 (288)
6 3kcq_A Phosphoribosylglycinami 100.0 2.5E-50 8.5E-55 356.5 26.4 195 36-264 6-202 (215)
7 3tqr_A Phosphoribosylglycinami 100.0 4.2E-50 1.5E-54 355.1 26.7 194 36-264 3-202 (215)
8 1jkx_A GART;, phosphoribosylgl 100.0 8.1E-50 2.8E-54 352.3 26.6 193 39-265 1-199 (212)
9 1meo_A Phosophoribosylglycinam 100.0 1.1E-49 3.9E-54 350.7 26.8 192 39-263 1-198 (209)
10 3p9x_A Phosphoribosylglycinami 100.0 8.4E-50 2.9E-54 352.3 24.7 190 38-260 2-197 (211)
11 3auf_A Glycinamide ribonucleot 100.0 2.8E-49 9.7E-54 352.7 27.3 204 28-265 12-221 (229)
12 4ds3_A Phosphoribosylglycinami 100.0 1.9E-49 6.5E-54 349.5 25.1 191 38-262 7-206 (209)
13 3da8_A Probable 5'-phosphoribo 100.0 3.5E-49 1.2E-53 349.2 26.5 193 35-263 9-207 (215)
14 2ywr_A Phosphoribosylglycinami 100.0 1.2E-48 4.2E-53 345.3 26.7 193 38-264 1-199 (216)
15 3av3_A Phosphoribosylglycinami 100.0 1.1E-47 3.7E-52 338.5 24.9 186 38-256 3-194 (212)
16 1fmt_A Methionyl-tRNA FMet for 100.0 6.6E-44 2.2E-48 331.0 24.9 186 37-261 2-198 (314)
17 2bln_A Protein YFBG; transfera 100.0 7.5E-44 2.6E-48 329.3 21.6 184 39-261 1-192 (305)
18 3rfo_A Methionyl-tRNA formyltr 100.0 5.3E-43 1.8E-47 325.4 24.1 187 36-261 2-199 (317)
19 3tqq_A Methionyl-tRNA formyltr 100.0 8.4E-43 2.9E-47 323.6 25.2 186 38-262 2-198 (314)
20 3q0i_A Methionyl-tRNA formyltr 100.0 5.1E-43 1.7E-47 325.6 22.5 185 38-261 7-202 (318)
21 2bw0_A 10-FTHFDH, 10-formyltet 100.0 2.5E-41 8.5E-46 315.5 21.0 189 38-261 22-217 (329)
22 1z7e_A Protein aRNA; rossmann 100.0 5.7E-41 2E-45 334.4 22.4 184 39-261 1-192 (660)
23 1zgh_A Methionyl-tRNA formyltr 100.0 3.7E-31 1.3E-35 239.8 10.9 116 107-260 68-186 (260)
24 2i6u_A Otcase, ornithine carba 95.1 0.24 8E-06 45.4 12.2 119 38-182 148-270 (307)
25 4gmf_A Yersiniabactin biosynth 95.0 0.02 6.8E-07 53.5 4.7 56 33-95 2-57 (372)
26 3gd5_A Otcase, ornithine carba 94.6 0.18 6.3E-06 46.5 10.1 116 38-182 157-278 (323)
27 4ep1_A Otcase, ornithine carba 94.5 0.14 4.7E-06 47.7 8.8 117 38-182 179-299 (340)
28 1pvv_A Otcase, ornithine carba 94.2 0.22 7.4E-06 45.8 9.5 118 38-182 155-276 (315)
29 1vlv_A Otcase, ornithine carba 94.1 0.23 7.9E-06 45.8 9.4 120 38-183 167-291 (325)
30 3tpf_A Otcase, ornithine carba 94.1 0.19 6.6E-06 46.0 8.8 118 38-182 146-267 (307)
31 3grf_A Ornithine carbamoyltran 93.1 0.34 1.1E-05 44.8 8.7 120 38-182 161-288 (328)
32 3csu_A Protein (aspartate carb 92.1 0.54 1.8E-05 43.1 8.6 113 38-176 154-268 (310)
33 1ml4_A Aspartate transcarbamoy 91.2 1.5 5.1E-05 40.0 10.6 113 38-176 155-269 (308)
34 1duv_G Octase-1, ornithine tra 90.9 0.6 2.1E-05 43.2 7.7 118 38-180 155-277 (333)
35 4a8t_A Putrescine carbamoyltra 90.9 0.59 2E-05 43.3 7.7 118 38-182 175-297 (339)
36 4f2g_A Otcase 1, ornithine car 90.8 0.37 1.3E-05 44.1 6.2 60 108-182 210-269 (309)
37 4had_A Probable oxidoreductase 90.8 0.34 1.2E-05 43.6 5.9 71 35-122 20-94 (350)
38 4ekn_B Aspartate carbamoyltran 90.8 0.75 2.6E-05 42.0 8.2 112 38-176 151-264 (306)
39 1dxh_A Ornithine carbamoyltran 90.8 0.6 2.1E-05 43.2 7.6 118 38-180 155-277 (335)
40 1zq6_A Otcase, ornithine carba 89.6 2.6 9E-05 39.3 10.9 121 38-182 190-320 (359)
41 4a8p_A Putrescine carbamoyltra 89.4 0.78 2.7E-05 42.8 7.1 118 38-182 153-275 (355)
42 3rjz_A N-type ATP pyrophosphat 89.1 1.7 6E-05 38.1 8.9 79 38-119 4-95 (237)
43 2ef0_A Ornithine carbamoyltran 89.1 1.3 4.5E-05 40.3 8.3 60 109-183 208-267 (301)
44 2w37_A Ornithine carbamoyltran 89.1 0.9 3.1E-05 42.5 7.3 116 38-180 176-298 (359)
45 4amu_A Ornithine carbamoyltran 88.7 1 3.5E-05 42.2 7.5 119 38-181 180-304 (365)
46 3ip3_A Oxidoreductase, putativ 88.0 1.2 4.1E-05 40.0 7.3 74 38-122 2-75 (337)
47 3kzn_A Aotcase, N-acetylornith 86.9 9.6 0.00033 35.2 12.9 121 37-182 189-320 (359)
48 3sds_A Ornithine carbamoyltran 86.7 3.7 0.00012 38.2 9.9 118 37-181 187-312 (353)
49 4fb5_A Probable oxidoreductase 86.7 1.3 4.4E-05 39.8 6.7 72 37-122 24-102 (393)
50 3q2i_A Dehydrogenase; rossmann 86.2 1.4 4.8E-05 39.7 6.7 71 35-122 10-83 (354)
51 3ohs_X Trans-1,2-dihydrobenzen 86.1 0.69 2.4E-05 41.4 4.6 70 38-122 2-74 (334)
52 3rc1_A Sugar 3-ketoreductase; 85.1 0.98 3.4E-05 40.9 5.1 72 35-122 24-97 (350)
53 3mz0_A Inositol 2-dehydrogenas 84.2 3.5 0.00012 36.9 8.4 71 38-122 2-74 (344)
54 3moi_A Probable dehydrogenase; 83.2 1.3 4.4E-05 40.7 5.1 69 37-122 1-72 (387)
55 4gqa_A NAD binding oxidoreduct 81.8 1.8 6.1E-05 39.9 5.5 74 36-122 24-104 (412)
56 3evn_A Oxidoreductase, GFO/IDH 81.5 1.3 4.6E-05 39.5 4.4 68 37-122 4-75 (329)
57 3u3x_A Oxidoreductase; structu 81.4 4 0.00014 37.1 7.6 69 38-122 26-96 (361)
58 3a06_A 1-deoxy-D-xylulose 5-ph 81.3 2.6 8.9E-05 39.6 6.4 83 39-128 4-101 (376)
59 3e9m_A Oxidoreductase, GFO/IDH 81.0 2 7E-05 38.3 5.5 69 37-122 4-75 (330)
60 2nvw_A Galactose/lactose metab 80.8 3.1 0.00011 39.7 6.9 53 37-93 38-92 (479)
61 4huj_A Uncharacterized protein 80.7 2.1 7.1E-05 36.1 5.1 66 38-122 23-89 (220)
62 1zh8_A Oxidoreductase; TM0312, 80.1 3.3 0.00011 37.1 6.6 72 35-122 15-90 (340)
63 4hkt_A Inositol 2-dehydrogenas 79.8 2.7 9.3E-05 37.3 5.9 66 38-122 3-71 (331)
64 3dty_A Oxidoreductase, GFO/IDH 79.8 3.5 0.00012 37.9 6.7 72 37-122 11-93 (398)
65 3ezy_A Dehydrogenase; structur 79.8 2.6 9E-05 37.7 5.7 69 38-122 2-72 (344)
66 3cea_A MYO-inositol 2-dehydrog 79.3 4.6 0.00016 35.9 7.2 72 35-122 5-79 (346)
67 1oth_A Protein (ornithine tran 79.2 8.8 0.0003 35.1 9.1 113 38-176 155-272 (321)
68 1nvm_B Acetaldehyde dehydrogen 79.1 3.6 0.00012 37.1 6.5 74 37-122 3-79 (312)
69 3uuw_A Putative oxidoreductase 79.0 3.1 0.00011 36.5 5.9 68 38-122 6-74 (308)
70 4h31_A Otcase, ornithine carba 79.0 4.7 0.00016 37.4 7.3 76 85-182 229-305 (358)
71 1ydw_A AX110P-like protein; st 79.0 6 0.0002 35.6 7.9 72 36-122 4-79 (362)
72 2p2s_A Putative oxidoreductase 79.0 4 0.00014 36.3 6.7 68 38-122 4-74 (336)
73 3fwz_A Inner membrane protein 78.4 5 0.00017 31.0 6.4 73 35-122 4-79 (140)
74 2w6k_A COBE; biosynthetic prot 78.1 6.9 0.00024 31.7 7.3 67 32-98 4-75 (145)
75 3db2_A Putative NADPH-dependen 77.8 2.3 7.9E-05 38.2 4.8 69 37-122 4-74 (354)
76 3btv_A Galactose/lactose metab 77.7 2.8 9.5E-05 39.3 5.5 49 37-93 19-73 (438)
77 1pg5_A Aspartate carbamoyltran 77.5 7.6 0.00026 35.2 8.1 111 38-176 149-261 (299)
78 3v5n_A Oxidoreductase; structu 77.4 3.7 0.00013 38.1 6.1 76 37-122 36-118 (417)
79 3euw_A MYO-inositol dehydrogen 75.8 4.9 0.00017 35.8 6.3 68 37-122 3-73 (344)
80 3d6n_B Aspartate carbamoyltran 75.6 2.5 8.5E-05 38.3 4.3 24 154-182 233-256 (291)
81 1r0k_A 1-deoxy-D-xylulose 5-ph 75.5 6.2 0.00021 37.1 7.1 55 38-98 4-60 (388)
82 2cwd_A Low molecular weight ph 73.8 7.1 0.00024 31.7 6.3 83 36-124 2-93 (161)
83 4h3v_A Oxidoreductase domain p 72.9 5 0.00017 35.8 5.6 72 38-122 6-83 (390)
84 3abi_A Putative uncharacterize 72.9 4.5 0.00016 36.7 5.4 73 34-122 12-85 (365)
85 3o9z_A Lipopolysaccaride biosy 72.8 7.5 0.00026 34.6 6.7 35 36-75 1-37 (312)
86 4etn_A LMPTP, low molecular we 72.6 4.4 0.00015 34.0 4.9 83 35-124 31-120 (184)
87 3e18_A Oxidoreductase; dehydro 72.4 2 6.9E-05 39.0 2.9 68 37-122 4-73 (359)
88 3ec7_A Putative dehydrogenase; 71.1 23 0.00079 31.8 9.7 73 36-122 21-95 (357)
89 1ni5_A Putative cell cycle pro 70.4 13 0.00045 34.9 8.1 61 38-98 13-80 (433)
90 1js1_X Transcarbamylase; alpha 69.3 18 0.0006 33.2 8.5 82 83-183 188-281 (324)
91 1tlt_A Putative oxidoreductase 68.9 16 0.00053 32.1 7.9 50 37-93 4-54 (319)
92 3rsc_A CALG2; TDP, enediyne, s 67.8 21 0.0007 31.8 8.6 57 33-98 15-74 (415)
93 2ho3_A Oxidoreductase, GFO/IDH 67.6 11 0.00039 33.1 6.7 69 38-122 1-70 (325)
94 3nbm_A PTS system, lactose-spe 66.1 5.7 0.0002 30.5 3.9 64 35-98 3-85 (108)
95 3oa2_A WBPB; oxidoreductase, s 65.8 11 0.00039 33.5 6.4 35 36-75 1-37 (318)
96 1p8a_A Protein tyrosine phosph 65.8 12 0.0004 29.8 5.8 84 37-125 3-90 (146)
97 3llv_A Exopolyphosphatase-rela 65.7 12 0.0004 28.5 5.7 69 38-121 6-77 (141)
98 3qhp_A Type 1 capsular polysac 65.5 41 0.0014 25.5 9.0 80 39-123 3-83 (166)
99 3ic5_A Putative saccharopine d 65.4 34 0.0012 24.4 8.1 73 37-122 4-77 (118)
100 1lss_A TRK system potassium up 65.1 15 0.00053 27.2 6.2 71 38-121 4-76 (140)
101 1u2p_A Ptpase, low molecular w 65.0 14 0.00047 29.9 6.2 82 37-125 3-93 (163)
102 3jtm_A Formate dehydrogenase, 64.7 24 0.00082 32.3 8.5 163 38-253 164-332 (351)
103 1h6d_A Precursor form of gluco 64.1 11 0.00036 35.3 6.0 51 36-93 81-132 (433)
104 3tri_A Pyrroline-5-carboxylate 64.0 7.7 0.00026 34.0 4.8 112 38-176 3-123 (280)
105 2iya_A OLEI, oleandomycin glyc 63.9 56 0.0019 29.2 10.8 53 37-98 11-66 (424)
106 3k32_A Uncharacterized protein 63.7 12 0.0004 31.2 5.7 57 38-99 6-65 (203)
107 3jvi_A Protein tyrosine phosph 63.2 14 0.00046 30.1 5.9 83 37-125 3-94 (161)
108 3l4b_C TRKA K+ channel protien 63.1 9.6 0.00033 31.5 5.1 70 39-122 1-73 (218)
109 2ahr_A Putative pyrroline carb 62.4 5 0.00017 34.1 3.2 66 37-122 2-68 (259)
110 3nkl_A UDP-D-quinovosamine 4-d 61.7 34 0.0011 25.9 7.7 59 37-98 3-72 (141)
111 3q98_A Transcarbamylase; rossm 61.2 51 0.0018 30.9 10.2 128 38-180 191-337 (399)
112 3s2u_A UDP-N-acetylglucosamine 61.2 21 0.00073 32.0 7.4 54 38-98 2-58 (365)
113 3d1l_A Putative NADP oxidoredu 61.1 4.6 0.00016 34.5 2.7 66 38-122 10-76 (266)
114 2g1u_A Hypothetical protein TM 60.3 5.7 0.00019 31.1 3.0 77 32-122 13-92 (155)
115 3otg_A CALG1; calicheamicin, T 59.7 22 0.00074 31.5 7.1 56 35-99 17-75 (412)
116 3i23_A Oxidoreductase, GFO/IDH 59.5 7.6 0.00026 34.8 4.0 46 38-93 2-49 (349)
117 2h78_A Hibadh, 3-hydroxyisobut 58.7 16 0.00053 31.8 5.8 65 37-122 2-67 (302)
118 2glx_A 1,5-anhydro-D-fructose 58.4 8.4 0.00029 33.9 4.0 47 39-93 1-48 (332)
119 3gt0_A Pyrroline-5-carboxylate 58.3 6.1 0.00021 33.6 3.0 67 38-122 2-71 (247)
120 3rh0_A Arsenate reductase; oxi 58.0 14 0.00048 29.8 5.0 84 32-122 14-100 (148)
121 4fzr_A SSFS6; structural genom 57.7 45 0.0015 29.5 8.9 55 35-98 12-69 (398)
122 4dll_A 2-hydroxy-3-oxopropiona 57.7 20 0.00068 31.7 6.5 65 37-122 30-95 (320)
123 3oti_A CALG3; calicheamicin, T 56.6 40 0.0014 29.9 8.3 54 35-98 17-73 (398)
124 3l9w_A Glutathione-regulated p 56.4 16 0.00056 34.1 5.9 51 37-98 3-54 (413)
125 2yfk_A Aspartate/ornithine car 56.0 72 0.0025 30.1 10.2 127 38-182 188-337 (418)
126 3ggo_A Prephenate dehydrogenas 55.9 34 0.0012 30.4 7.7 122 38-182 33-159 (314)
127 3keo_A Redox-sensing transcrip 55.8 16 0.00056 31.3 5.3 104 34-179 80-186 (212)
128 3ia7_A CALG4; glycosysltransfe 55.2 33 0.0011 30.0 7.4 52 38-98 4-58 (402)
129 3h4t_A Glycosyltransferase GTF 54.8 70 0.0024 28.6 9.8 51 39-98 1-54 (404)
130 4hy3_A Phosphoglycerate oxidor 54.7 63 0.0021 29.7 9.5 159 38-254 176-342 (365)
131 4dio_A NAD(P) transhydrogenase 53.6 44 0.0015 31.4 8.3 105 37-176 189-313 (405)
132 3tsa_A SPNG, NDP-rhamnosyltran 53.3 68 0.0023 28.1 9.2 51 38-97 1-54 (391)
133 3hbm_A UDP-sugar hydrolase; PS 53.1 27 0.00092 30.9 6.5 73 39-125 1-80 (282)
134 3oqb_A Oxidoreductase; structu 52.8 31 0.0011 31.0 7.0 71 35-122 3-91 (383)
135 2nac_A NAD-dependent formate d 52.7 43 0.0015 31.2 8.0 159 38-253 191-359 (393)
136 3m2t_A Probable dehydrogenase; 52.3 11 0.00039 33.9 3.9 48 38-92 5-53 (359)
137 1f0k_A MURG, UDP-N-acetylgluco 52.3 47 0.0016 28.6 7.9 78 39-123 7-105 (364)
138 3loq_A Universal stress protei 52.0 65 0.0022 27.3 8.7 116 36-175 168-291 (294)
139 2ixa_A Alpha-N-acetylgalactosa 51.9 26 0.00088 32.5 6.4 74 37-122 19-99 (444)
140 1np3_A Ketol-acid reductoisome 51.7 30 0.001 31.0 6.7 63 39-122 17-80 (338)
141 3bio_A Oxidoreductase, GFO/IDH 51.7 15 0.0005 32.6 4.5 33 38-74 9-42 (304)
142 3v7e_A Ribosome-associated pro 51.2 10 0.00034 27.5 2.7 43 53-99 17-61 (82)
143 2czc_A Glyceraldehyde-3-phosph 51.1 73 0.0025 28.5 9.2 51 38-95 2-52 (334)
144 4fgw_A Glycerol-3-phosphate de 50.5 7.4 0.00025 36.5 2.4 24 35-58 31-55 (391)
145 1wy5_A TILS, hypothetical UPF0 50.5 23 0.00079 31.5 5.7 62 36-98 22-91 (317)
146 3oj0_A Glutr, glutamyl-tRNA re 50.3 29 0.00098 26.5 5.6 68 38-122 21-88 (144)
147 3c85_A Putative glutathione-re 49.8 35 0.0012 27.0 6.2 69 38-121 39-112 (183)
148 2y1e_A 1-deoxy-D-xylulose 5-ph 49.8 47 0.0016 31.3 7.7 87 36-128 19-121 (398)
149 3d4o_A Dipicolinate synthase s 49.6 1.2E+02 0.0043 26.1 10.3 91 37-176 154-245 (293)
150 1q0q_A 1-deoxy-D-xylulose 5-ph 49.4 53 0.0018 31.1 8.0 58 35-98 6-65 (406)
151 3e82_A Putative oxidoreductase 48.9 38 0.0013 30.4 6.9 36 36-75 5-42 (364)
152 2r6j_A Eugenol synthase 1; phe 48.6 66 0.0023 27.5 8.2 73 39-122 12-87 (318)
153 2der_A TRNA-specific 2-thiouri 48.3 29 0.001 32.1 6.1 60 35-99 14-86 (380)
154 2gi4_A Possible phosphotyrosin 48.1 25 0.00087 28.2 5.1 82 38-124 1-91 (156)
155 3beo_A UDP-N-acetylglucosamine 47.4 1.2E+02 0.0041 26.0 9.8 82 37-122 7-103 (375)
156 3n8i_A Low molecular weight ph 47.4 34 0.0012 27.6 5.7 83 37-125 4-95 (157)
157 2j6i_A Formate dehydrogenase; 46.9 78 0.0027 28.9 8.7 163 38-253 164-338 (364)
158 2wmy_A WZB, putative acid phos 46.7 26 0.0009 27.9 4.9 81 38-124 8-91 (150)
159 4g65_A TRK system potassium up 46.2 22 0.00077 33.5 5.1 71 37-121 2-75 (461)
160 3hbm_A UDP-sugar hydrolase; PS 45.9 45 0.0015 29.4 6.8 94 15-122 138-233 (282)
161 3tnj_A Universal stress protei 45.9 42 0.0014 25.1 5.8 41 83-125 76-120 (150)
162 2dbq_A Glyoxylate reductase; D 45.1 98 0.0034 27.6 9.0 157 38-253 150-315 (334)
163 3hdj_A Probable ornithine cycl 44.8 1.2E+02 0.004 27.0 9.4 103 38-186 121-225 (313)
164 2d0i_A Dehydrogenase; structur 44.4 1.2E+02 0.0042 27.0 9.6 156 38-253 146-311 (333)
165 2lbw_A H/ACA ribonucleoprotein 43.9 29 0.00098 26.8 4.6 53 53-113 26-80 (121)
166 1mx3_A CTBP1, C-terminal bindi 43.9 81 0.0028 28.6 8.3 159 38-253 168-336 (347)
167 3a2k_A TRNA(Ile)-lysidine synt 43.8 23 0.0008 33.4 4.8 62 36-98 16-85 (464)
168 3doj_A AT3G25530, dehydrogenas 43.5 24 0.00081 31.1 4.5 67 35-122 18-85 (310)
169 3c1a_A Putative oxidoreductase 43.3 78 0.0027 27.5 7.9 36 35-75 7-44 (315)
170 3bl5_A Queuosine biosynthesis 43.2 57 0.0019 26.5 6.6 56 39-99 4-64 (219)
171 2fek_A Low molecular weight pr 43.2 34 0.0012 28.0 5.1 81 38-124 22-105 (167)
172 3r7f_A Aspartate carbamoyltran 43.1 21 0.0007 32.4 4.1 84 82-182 164-255 (304)
173 1id1_A Putative potassium chan 42.9 56 0.0019 25.1 6.2 73 38-122 3-79 (153)
174 1yb4_A Tartronic semialdehyde 42.8 24 0.00083 30.2 4.4 18 37-54 2-20 (295)
175 1v8b_A Adenosylhomocysteinase; 42.3 79 0.0027 30.3 8.2 88 37-175 256-344 (479)
176 1k92_A Argininosuccinate synth 42.1 50 0.0017 31.6 6.8 59 35-98 7-71 (455)
177 1xea_A Oxidoreductase, GFO/IDH 41.5 17 0.00059 31.9 3.3 49 38-94 2-51 (323)
178 4etm_A LMPTP, low molecular we 41.5 42 0.0014 27.5 5.4 86 35-125 15-109 (173)
179 1rlg_A 50S ribosomal protein L 41.5 54 0.0018 25.0 5.8 54 53-113 33-87 (119)
180 2ale_A SNU13, NHP2/L7AE family 41.1 38 0.0013 26.8 4.9 53 53-113 38-92 (134)
181 2hma_A Probable tRNA (5-methyl 41.1 39 0.0013 31.1 5.8 58 36-98 7-77 (376)
182 2w2k_A D-mandelate dehydrogena 41.1 1E+02 0.0035 27.7 8.5 118 38-207 163-286 (348)
183 2l17_A Synarsc, arsenate reduc 41.0 20 0.00068 28.0 3.2 76 38-121 4-82 (134)
184 4gwg_A 6-phosphogluconate dehy 40.6 41 0.0014 32.2 6.0 70 37-121 3-75 (484)
185 3qsg_A NAD-binding phosphogluc 40.3 23 0.00078 31.3 3.9 66 37-122 23-91 (312)
186 2gcg_A Glyoxylate reductase/hy 40.0 2E+02 0.0068 25.5 10.4 158 38-253 155-322 (330)
187 3hn2_A 2-dehydropantoate 2-red 39.3 51 0.0017 28.8 6.0 69 38-122 2-77 (312)
188 2fc3_A 50S ribosomal protein L 39.2 52 0.0018 25.3 5.4 54 53-113 34-88 (124)
189 2ioj_A Hypothetical protein AF 38.9 31 0.0011 26.7 4.1 32 67-98 74-105 (139)
190 3by5_A Cobalamin biosynthesis 38.8 73 0.0025 25.9 6.4 31 68-98 41-71 (155)
191 3okp_A GDP-mannose-dependent a 38.7 60 0.002 28.0 6.4 79 37-122 3-94 (394)
192 3dtt_A NADP oxidoreductase; st 38.5 26 0.00087 29.7 3.8 19 36-54 17-36 (245)
193 1d1q_A Tyrosine phosphatase (E 38.5 34 0.0012 27.5 4.3 82 37-124 6-97 (161)
194 3j21_Z 50S ribosomal protein L 38.4 31 0.0011 25.5 3.9 41 53-97 21-63 (99)
195 1xbi_A 50S ribosomal protein L 38.2 47 0.0016 25.6 4.9 54 53-113 35-89 (120)
196 1jl3_A Arsenate reductase; alp 38.1 38 0.0013 26.4 4.5 75 39-121 4-81 (139)
197 1jf8_A Arsenate reductase; ptp 38.1 40 0.0014 26.1 4.6 76 38-121 3-81 (131)
198 3h9u_A Adenosylhomocysteinase; 38.0 88 0.003 29.7 7.7 87 38-175 211-298 (436)
199 3t38_A Arsenate reductase; low 37.6 1.2E+02 0.004 25.8 7.9 101 16-123 55-162 (213)
200 1vq8_F 50S ribosomal protein L 37.5 50 0.0017 25.3 5.0 54 53-113 35-89 (120)
201 3fhl_A Putative oxidoreductase 37.4 13 0.00044 33.5 1.8 35 37-75 4-40 (362)
202 1v4v_A UDP-N-acetylglucosamine 37.0 1.4E+02 0.0049 25.7 8.6 83 37-123 4-100 (376)
203 3kux_A Putative oxidoreductase 36.7 49 0.0017 29.3 5.6 35 37-75 6-42 (352)
204 2iyf_A OLED, oleandomycin glyc 36.5 1.1E+02 0.0039 27.0 8.0 52 38-98 7-61 (430)
205 3p2y_A Alanine dehydrogenase/p 36.5 94 0.0032 28.9 7.6 105 37-176 183-303 (381)
206 2xzm_U Ribosomal protein L7AE 36.4 54 0.0018 25.6 5.1 44 53-99 30-75 (126)
207 3f4l_A Putative oxidoreductase 36.4 15 0.00052 32.7 2.1 34 38-75 2-38 (345)
208 3dzc_A UDP-N-acetylglucosamine 36.2 2.3E+02 0.0079 25.4 10.2 83 36-123 23-120 (396)
209 3pdu_A 3-hydroxyisobutyrate de 36.2 25 0.00084 30.3 3.4 63 38-122 1-65 (287)
210 2g5c_A Prephenate dehydrogenas 36.1 56 0.0019 27.8 5.6 68 38-122 1-70 (281)
211 3au8_A 1-deoxy-D-xylulose 5-ph 36.1 90 0.0031 30.1 7.4 60 35-98 74-136 (488)
212 3g0o_A 3-hydroxyisobutyrate de 35.8 30 0.001 30.1 3.9 67 36-122 5-72 (303)
213 2vns_A Metalloreductase steap3 35.7 41 0.0014 27.8 4.6 16 37-52 27-43 (215)
214 3rpe_A MDAB, modulator of drug 35.7 1.1E+02 0.0039 25.8 7.5 16 107-122 76-91 (218)
215 3gdo_A Uncharacterized oxidore 35.1 57 0.0019 29.1 5.7 35 37-75 4-40 (358)
216 1sur_A PAPS reductase; assimil 35.1 45 0.0016 27.5 4.8 56 39-99 45-105 (215)
217 3rof_A Low molecular weight pr 35.1 49 0.0017 26.7 4.8 81 37-124 5-93 (158)
218 3gg9_A D-3-phosphoglycerate de 35.0 1.1E+02 0.0039 27.7 7.8 159 38-253 160-327 (352)
219 3on1_A BH2414 protein; structu 34.9 25 0.00085 26.1 2.8 54 53-113 24-77 (101)
220 2wja_A Putative acid phosphata 34.7 32 0.0011 28.1 3.7 81 38-124 26-109 (168)
221 2rir_A Dipicolinate synthase, 34.5 1.7E+02 0.0057 25.3 8.6 70 37-125 156-226 (300)
222 3o85_A Ribosomal protein L7AE; 34.3 55 0.0019 25.3 4.8 52 53-112 37-90 (122)
223 2o2z_A Hypothetical protein; s 34.3 56 0.0019 29.8 5.6 38 37-78 3-40 (323)
224 3v7q_A Probable ribosomal prot 33.7 31 0.0011 25.7 3.2 54 53-113 25-78 (101)
225 1pgj_A 6PGDH, 6-PGDH, 6-phosph 33.2 33 0.0011 32.5 4.0 69 39-122 2-76 (478)
226 1vpd_A Tartronate semialdehyde 33.1 53 0.0018 28.1 5.0 63 39-122 6-69 (299)
227 3mt0_A Uncharacterized protein 33.0 87 0.003 26.5 6.4 69 83-174 204-276 (290)
228 3d64_A Adenosylhomocysteinase; 32.7 1.3E+02 0.0043 29.0 8.0 89 37-176 276-365 (494)
229 3cky_A 2-hydroxymethyl glutara 32.7 51 0.0017 28.2 4.8 17 37-53 3-20 (301)
230 3c1o_A Eugenol synthase; pheny 32.6 1.3E+02 0.0044 25.5 7.5 76 37-122 3-85 (321)
231 2axq_A Saccharopine dehydrogen 32.4 91 0.0031 29.5 6.9 75 37-122 22-96 (467)
232 2o4c_A Erythronate-4-phosphate 32.3 91 0.0031 28.8 6.7 88 154-253 186-281 (380)
233 1qyc_A Phenylcoumaran benzylic 32.3 1.3E+02 0.0045 25.2 7.4 75 38-122 4-85 (308)
234 3ijp_A DHPR, dihydrodipicolina 32.2 14 0.00047 33.3 1.0 35 37-75 20-56 (288)
235 2dt5_A AT-rich DNA-binding pro 31.9 37 0.0013 28.8 3.7 71 35-122 77-148 (211)
236 2gas_A Isoflavone reductase; N 31.8 1.6E+02 0.0056 24.6 7.9 76 38-122 2-84 (307)
237 3dhn_A NAD-dependent epimerase 31.8 64 0.0022 25.9 5.1 72 38-122 4-75 (227)
238 1x7d_A Ornithine cyclodeaminas 31.4 1E+02 0.0034 27.9 6.8 69 38-123 129-203 (350)
239 1bg6_A N-(1-D-carboxylethyl)-L 31.4 91 0.0031 27.1 6.4 19 38-56 4-23 (359)
240 1evy_A Glycerol-3-phosphate de 31.3 43 0.0015 29.8 4.2 15 40-54 17-32 (366)
241 1yqg_A Pyrroline-5-carboxylate 31.2 22 0.00074 30.0 2.1 63 39-122 1-65 (263)
242 4e21_A 6-phosphogluconate dehy 31.2 72 0.0025 29.0 5.8 66 38-121 22-88 (358)
243 4egs_A Ribose 5-phosphate isom 31.0 50 0.0017 27.2 4.3 85 35-124 31-122 (180)
244 2ppv_A Uncharacterized protein 30.8 62 0.0021 29.7 5.2 37 38-78 4-40 (332)
245 3k96_A Glycerol-3-phosphate de 30.7 91 0.0031 28.2 6.4 21 37-57 28-49 (356)
246 4a17_F RPL7A, 60S ribosomal pr 30.5 1.7E+02 0.0057 25.9 7.8 76 37-124 118-197 (255)
247 3s40_A Diacylglycerol kinase; 30.4 1.4E+02 0.0047 26.1 7.4 13 35-47 5-17 (304)
248 3ktd_A Prephenate dehydrogenas 30.2 1.2E+02 0.0041 27.4 7.1 119 38-183 8-134 (341)
249 2gf2_A Hibadh, 3-hydroxyisobut 29.9 54 0.0018 28.0 4.5 63 39-122 1-64 (296)
250 3jyw_G 60S ribosomal protein L 29.9 21 0.00071 27.7 1.6 44 53-100 31-77 (113)
251 3i6i_A Putative leucoanthocyan 29.6 1.2E+02 0.004 26.3 6.7 77 38-123 10-92 (346)
252 2aif_A Ribosomal protein L7A; 29.4 54 0.0019 25.8 4.1 52 53-113 47-101 (135)
253 2uyy_A N-PAC protein; long-cha 29.3 38 0.0013 29.4 3.4 65 37-122 29-94 (316)
254 2pgd_A 6-phosphogluconate dehy 29.2 59 0.002 30.7 5.0 67 38-121 2-73 (482)
255 2pjk_A 178AA long hypothetical 29.2 69 0.0024 26.2 4.8 75 35-125 12-92 (178)
256 3olq_A Universal stress protei 29.2 1E+02 0.0035 26.1 6.2 70 83-175 233-306 (319)
257 3fr7_A Putative ketol-acid red 29.1 1.5E+02 0.0051 28.9 7.8 72 39-121 55-128 (525)
258 1qyd_A Pinoresinol-lariciresin 29.0 77 0.0026 26.8 5.3 75 38-122 4-84 (313)
259 2iz1_A 6-phosphogluconate dehy 28.9 41 0.0014 31.7 3.8 68 38-122 5-76 (474)
260 3dqp_A Oxidoreductase YLBE; al 28.8 75 0.0026 25.5 5.0 71 39-123 1-72 (219)
261 1vl2_A Argininosuccinate synth 28.8 99 0.0034 29.2 6.4 60 35-99 11-74 (421)
262 1w41_A 50S ribosomal protein L 28.3 37 0.0013 25.1 2.8 52 53-113 22-76 (101)
263 2zyd_A 6-phosphogluconate dehy 28.0 40 0.0014 32.0 3.6 69 37-122 14-86 (480)
264 3obb_A Probable 3-hydroxyisobu 27.9 92 0.0031 27.4 5.8 63 37-121 2-66 (300)
265 3iz5_f 60S ribosomal protein L 27.9 38 0.0013 26.0 2.8 43 53-97 32-74 (112)
266 2ywb_A GMP synthase [glutamine 27.6 1.5E+02 0.0052 28.0 7.6 56 39-99 210-270 (503)
267 3l6d_A Putative oxidoreductase 27.5 56 0.0019 28.6 4.2 64 37-122 8-73 (306)
268 3pef_A 6-phosphogluconate dehy 27.2 41 0.0014 28.9 3.2 63 39-122 2-65 (287)
269 1rpn_A GDP-mannose 4,6-dehydra 27.1 1.1E+02 0.0037 26.1 6.0 80 35-123 11-95 (335)
270 3b1f_A Putative prephenate deh 27.1 84 0.0029 26.7 5.3 68 38-122 6-74 (290)
271 2wm3_A NMRA-like family domain 27.1 2.6E+02 0.009 23.3 8.4 73 38-122 5-80 (299)
272 1jw9_B Molybdopterin biosynthe 27.0 65 0.0022 27.5 4.5 17 106-122 113-129 (249)
273 3upl_A Oxidoreductase; rossman 27.0 1.2E+02 0.0041 28.8 6.6 50 34-91 19-70 (446)
274 2pg3_A Queuosine biosynthesis 26.8 1.1E+02 0.0037 25.4 5.8 56 38-98 2-63 (232)
275 3ruf_A WBGU; rossmann fold, UD 26.6 2.3E+02 0.0079 24.2 8.1 75 38-123 25-109 (351)
276 2vt3_A REX, redox-sensing tran 26.4 43 0.0015 28.5 3.1 70 36-122 83-153 (215)
277 1zzg_A Glucose-6-phosphate iso 26.2 76 0.0026 29.8 5.1 59 37-99 115-182 (415)
278 1y5e_A Molybdenum cofactor bio 26.1 68 0.0023 25.8 4.2 44 82-125 35-83 (169)
279 2vsy_A XCC0866; transferase, g 25.7 3.9E+02 0.013 24.5 11.1 79 35-121 202-289 (568)
280 3ecs_A Translation initiation 25.6 1.2E+02 0.0041 27.4 6.1 63 49-120 132-195 (315)
281 2x4g_A Nucleoside-diphosphate- 25.5 1.4E+02 0.0047 25.4 6.4 73 36-123 11-86 (342)
282 2qv7_A Diacylglycerol kinase D 25.5 1.8E+02 0.0061 25.6 7.3 8 39-46 25-32 (337)
283 2p0y_A Hypothetical protein LP 25.3 62 0.0021 29.7 4.2 38 37-78 9-46 (341)
284 1pzg_A LDH, lactate dehydrogen 25.2 79 0.0027 28.3 4.9 23 35-57 6-29 (331)
285 4ew6_A D-galactose-1-dehydroge 25.2 1.8E+02 0.0061 25.6 7.2 36 38-75 25-60 (330)
286 2f1k_A Prephenate dehydrogenas 25.1 91 0.0031 26.3 5.1 64 39-122 1-65 (279)
287 4amg_A Snogd; transferase, pol 24.7 2.4E+02 0.0082 24.4 7.9 36 37-75 21-59 (400)
288 2hmt_A YUAA protein; RCK, KTN, 24.6 52 0.0018 24.2 3.0 71 38-122 6-78 (144)
289 1gpj_A Glutamyl-tRNA reductase 24.5 72 0.0024 29.3 4.5 68 37-122 166-235 (404)
290 1vgv_A UDP-N-acetylglucosamine 24.5 2.3E+02 0.0079 24.3 7.7 81 39-123 1-95 (384)
291 1l7d_A Nicotinamide nucleotide 24.3 3.4E+02 0.012 24.4 9.1 47 37-94 171-218 (384)
292 2cvz_A Dehydrogenase, 3-hydrox 24.2 91 0.0031 26.2 4.9 17 38-54 1-18 (289)
293 4g2n_A D-isomer specific 2-hyd 24.1 2.3E+02 0.0079 25.6 7.8 110 108-253 221-338 (345)
294 2bon_A Lipid kinase; DAG kinas 24.0 2.1E+02 0.0072 25.2 7.5 8 39-46 30-37 (332)
295 2g76_A 3-PGDH, D-3-phosphoglyc 23.6 2.2E+02 0.0075 25.5 7.5 157 38-253 165-330 (335)
296 3r6d_A NAD-dependent epimerase 23.4 1.3E+02 0.0044 24.1 5.5 18 105-122 64-81 (221)
297 2izz_A Pyrroline-5-carboxylate 23.0 51 0.0018 29.0 3.1 68 38-122 22-92 (322)
298 3hg7_A D-isomer specific 2-hyd 22.9 1.5E+02 0.005 26.7 6.2 114 107-254 187-305 (324)
299 2dpo_A L-gulonate 3-dehydrogen 22.8 3.4E+02 0.011 24.0 8.6 66 109-178 82-150 (319)
300 2f9f_A First mannosyl transfer 22.5 2.6E+02 0.009 21.3 9.5 80 36-122 21-105 (177)
301 2gek_A Phosphatidylinositol ma 22.5 39 0.0013 29.4 2.2 39 34-74 16-61 (406)
302 3cpq_A 50S ribosomal protein L 22.4 50 0.0017 24.9 2.5 52 53-113 27-81 (110)
303 1x0v_A GPD-C, GPDH-C, glycerol 22.4 2.9E+02 0.0099 23.9 8.0 19 38-56 8-27 (354)
304 2yjn_A ERYCIII, glycosyltransf 22.4 1.1E+02 0.0038 27.5 5.4 57 34-99 16-75 (441)
305 1ygy_A PGDH, D-3-phosphoglycer 22.3 2E+02 0.0069 27.4 7.4 114 38-205 142-260 (529)
306 1vbk_A Hypothetical protein PH 22.3 1.1E+02 0.0037 27.2 5.1 77 37-123 178-264 (307)
307 3ot5_A UDP-N-acetylglucosamine 22.3 4.3E+02 0.015 23.7 9.5 82 38-123 27-123 (403)
308 2l82_A Designed protein OR32; 22.2 1.9E+02 0.0065 22.7 5.8 82 41-124 4-87 (162)
309 2xw6_A MGS, methylglyoxal synt 22.1 1.3E+02 0.0043 23.9 4.9 40 53-96 64-110 (134)
310 3iz5_H 60S ribosomal protein L 22.1 2.2E+02 0.0076 25.1 6.9 64 53-124 133-200 (258)
311 1i36_A Conserved hypothetical 22.1 61 0.0021 27.1 3.3 63 39-122 1-64 (264)
312 2zkr_f 60S ribosomal protein L 21.8 1.6E+02 0.0054 26.2 6.0 54 53-113 141-195 (266)
313 3r5t_A Ferric vibriobactin ABC 21.8 3.2E+02 0.011 23.3 8.0 77 35-124 20-96 (305)
314 2q7x_A UPF0052 protein SP_1565 21.4 90 0.0031 28.4 4.4 37 38-78 4-40 (326)
315 2aef_A Calcium-gated potassium 21.4 1.2E+02 0.0042 24.8 5.0 70 37-121 8-78 (234)
316 4dgs_A Dehydrogenase; structur 21.4 1.8E+02 0.0062 26.3 6.5 113 108-253 216-333 (340)
317 4e6f_A Uncharacterized protein 21.1 98 0.0034 26.0 4.2 35 209-244 21-55 (181)
318 4ina_A Saccharopine dehydrogen 20.7 1.5E+02 0.005 27.1 5.9 75 38-122 1-84 (405)
319 2uyg_A 3-dehydroquinate dehydr 20.7 3E+02 0.01 22.3 7.0 38 81-121 31-73 (149)
320 3u95_A Glycoside hydrolase, fa 20.7 65 0.0022 30.6 3.5 40 137-176 143-184 (477)
321 3dfz_A SIRC, precorrin-2 dehyd 20.7 91 0.0031 26.6 4.1 67 38-122 31-99 (223)
322 3qha_A Putative oxidoreductase 20.5 95 0.0032 26.8 4.3 63 38-122 15-78 (296)
323 3c24_A Putative oxidoreductase 20.3 1.2E+02 0.004 25.9 4.8 63 38-122 11-75 (286)
324 1yj8_A Glycerol-3-phosphate de 20.2 1.1E+02 0.0037 27.4 4.7 20 37-56 20-40 (375)
325 1omo_A Alanine dehydrogenase; 20.1 1.6E+02 0.0054 26.1 5.7 68 37-123 124-196 (322)
326 2nz2_A Argininosuccinate synth 20.1 2E+02 0.0069 26.8 6.7 56 38-98 5-64 (413)
327 2q8n_A Glucose-6-phosphate iso 20.0 1.2E+02 0.004 29.0 5.1 59 37-99 139-205 (460)
328 2kg4_A Growth arrest and DNA-d 20.0 1.2E+02 0.004 25.1 4.4 18 83-100 78-95 (165)
No 1
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=6.2e-53 Score=387.28 Aligned_cols=219 Identities=36% Similarity=0.613 Sum_probs=199.1
Q ss_pred ccCCCcchhHhhhHhhhccccccccCCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHH
Q 024606 8 RMSSIPGDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 87 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a 87 (265)
..+.+..+|.+++++|++.+ ++.+.++++||+||+||+||||++|++++++|.++++|++||||+++ +..+|
T Consensus 63 ~~~~L~~~f~~la~~l~m~~---~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-----~~~~A 134 (286)
T 3n0v_A 63 DEAGFRAGLAERSEAFGMAF---ELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPD-----LEPLA 134 (286)
T ss_dssp CHHHHHHHHHHHHGGGTCEE---EEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSST-----THHHH
T ss_pred CHHHHHHHHHHHHHHcCCEE---EeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHH-----HHHHH
Confidence 34556789999999998754 44467778999999999999999999999999999999999999853 35679
Q ss_pred HHcCCCEEEECCCCCch---HHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHH
Q 024606 88 ERHGIPYHYLCAKENER---EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFL 162 (265)
Q Consensus 88 ~~~gIP~~~~~~~~~~~---~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il 162 (265)
+++|||++.++.+...+ ++++.+.++ ++|++|+||||+ |||++++
T Consensus 135 ~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l 184 (286)
T 3n0v_A 135 HWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVILARYMQ------------------------------VLSPELC 184 (286)
T ss_dssp HHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHH
T ss_pred HHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEEeccccc------------------------------ccCHHHH
Confidence 99999999887543223 457888887 899999999999 9999999
Q ss_pred hhcCCCeEEecCCCCCCCCCCcHHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 024606 163 RSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCL 242 (265)
Q Consensus 163 ~~~~~~~iNiHpslLP~yRG~~pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll 242 (265)
+.+++++||+|||+||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.+++++
T Consensus 185 ~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q~~~~i~~~dt~~~L~~r~~~~e~~~l 264 (286)
T 3n0v_A 185 RRLDGWAINIHHSLLPGFKGAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQGVEVVDHSHYPEDLIAKGRDIECLTL 264 (286)
T ss_dssp HHTTTSEEEEEECSSTTCCCSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhcCCeEEeccccccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEEEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeeecCCceeeC
Q 024606 243 AKAIKSYCELRVLPYEMNKTVVF 265 (265)
Q Consensus 243 ~~ai~~i~~g~~~~~~~~k~vv~ 265 (265)
+++++++.+|++.... ||||||
T Consensus 265 ~~av~~~~~~~~~~~~-~~~~vf 286 (286)
T 3n0v_A 265 ARAVGYHIERRVFLNA-NRTVVL 286 (286)
T ss_dssp HHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHHHhCCEEEcC-CEEEEC
Confidence 9999999999999875 999998
No 2
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=5.7e-53 Score=388.53 Aligned_cols=219 Identities=40% Similarity=0.701 Sum_probs=199.0
Q ss_pred ccCCCcchhHhhhHhhhccccccccCCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHH
Q 024606 8 RMSSIPGDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 87 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a 87 (265)
..+.+..+|.+++++|++.+ ++.+.++++||+||+||+||||++|++++++|.++++|++||||+++ + ..+|
T Consensus 68 ~~~~L~~~f~~la~~~~m~~---~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~---~--~~~A 139 (292)
T 3lou_A 68 RVDALRREFEPIAERFRMQW---AIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPD---F--APLA 139 (292)
T ss_dssp CHHHHHHHHHHHHHHHTCEE---EEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSST---T--HHHH
T ss_pred CHHHHHHHHHHHHHhcCcEE---EeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHH---H--HHHH
Confidence 44567789999999998754 44456778999999999999999999999999999999999999853 2 5679
Q ss_pred HHcCCCEEEECCCCCch---HHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHH
Q 024606 88 ERHGIPYHYLCAKENER---EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFL 162 (265)
Q Consensus 88 ~~~gIP~~~~~~~~~~~---~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il 162 (265)
+++|||++.++.+...+ ++++.+.++ ++|++|+||||+ |||++++
T Consensus 140 ~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l 189 (292)
T 3lou_A 140 AQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVILARYMQ------------------------------VLSPEAS 189 (292)
T ss_dssp HHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHH
T ss_pred HHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCCCEEEecCchh------------------------------hCCHHHH
Confidence 99999999887543223 457888887 899999999999 9999999
Q ss_pred hhcCCCeEEecCCCCCCCCCCcHHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 024606 163 RSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCL 242 (265)
Q Consensus 163 ~~~~~~~iNiHpslLP~yRG~~pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll 242 (265)
+.+++++||+|||+||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.+++++
T Consensus 190 ~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~~v~i~~~dt~~~L~~r~~~~e~~~l 269 (292)
T 3lou_A 190 ARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDHSYRPEQLLAVGRDVECITL 269 (292)
T ss_dssp HHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhcCCeEEeCCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeeecCCceeeC
Q 024606 243 AKAIKSYCELRVLPYEMNKTVVF 265 (265)
Q Consensus 243 ~~ai~~i~~g~~~~~~~~k~vv~ 265 (265)
+++++++.+|++.... ||||||
T Consensus 270 ~~av~~~~~~~~~~~~-~~~~vf 291 (292)
T 3lou_A 270 ARAVKAFIERRVFLNG-DRTVVF 291 (292)
T ss_dssp HHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHHHhCCEEEcC-CEEEEe
Confidence 9999999999999875 999998
No 3
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=2.4e-53 Score=390.19 Aligned_cols=225 Identities=41% Similarity=0.655 Sum_probs=200.6
Q ss_pred CCCccccCCCcchhHhhhHhhhccccccccCCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcH
Q 024606 3 SCPRKRMSSIPGDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSH 82 (265)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~ 82 (265)
+.|....+.+..+|.+++++|++.+ ++.+.++++||+||+||+||||++|++++++|.++++|++||||+++ +
T Consensus 56 ~~~~~~~~~L~~~f~~la~~~~m~~---~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~---a- 128 (287)
T 3nrb_A 56 EIPVAGVNDFNSAFGKVVEKYNAEW---WFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPR---E- 128 (287)
T ss_dssp ECCC---CHHHHHHHHHHGGGTCEE---EEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCG---G-
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCee---EeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChH---H-
Confidence 3444345567789999999998754 44456678999999999999999999999999999999999999843 2
Q ss_pred HHHHHHHcCCCEEEECCCCCch---HHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccC
Q 024606 83 VIRFLERHGIPYHYLCAKENER---EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 157 (265)
Q Consensus 83 v~~~a~~~gIP~~~~~~~~~~~---~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il 157 (265)
+.++|+++|||++.++.+...+ ++++.+.++ ++|++|+||||+ ||
T Consensus 129 ~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivlagym~------------------------------il 178 (287)
T 3nrb_A 129 ALSVSLVGDIPFHYLPVTPATKAAQESQIKNIVTQSQADLIVLARYMQ------------------------------IL 178 (287)
T ss_dssp GCCCCCCTTSCEEECCCCGGGHHHHHHHHHHHHHHHTCSEEEESSCCS------------------------------CC
T ss_pred HHHHHHHcCCCEEEEeccCcchhhHHHHHHHHHHHhCCCEEEhhhhhh------------------------------hc
Confidence 6778999999999887542222 457788887 899999999999 99
Q ss_pred ChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHH
Q 024606 158 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDV 237 (265)
Q Consensus 158 ~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~ 237 (265)
|+++++.|++++||+|||+||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.
T Consensus 179 ~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q~~v~i~~~dt~~~L~~r~~~~ 258 (287)
T 3nrb_A 179 SDDLSAFLSGRCINIHHSFLPGFKGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQDVEHVSHRDSAEDLVRKGRDI 258 (287)
T ss_dssp CHHHHHHHTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred CHHHHhhccCCeEEECcccccCCCCchHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCeeeecCCceeeC
Q 024606 238 EKQCLAKAIKSYCELRVLPYEMNKTVVF 265 (265)
Q Consensus 238 ~~~ll~~ai~~i~~g~~~~~~~~k~vv~ 265 (265)
++++++++++++.+|++.... ||||||
T Consensus 259 e~~~l~~av~~~~~~~~~~~~-~~~~vf 285 (287)
T 3nrb_A 259 ERRVLSRAVLLFLEDRLIVNG-ERTVVF 285 (287)
T ss_dssp HHHHHHHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEcC-CEEEEc
Confidence 999999999999999999875 999998
No 4
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.1e-52 Score=388.31 Aligned_cols=219 Identities=47% Similarity=0.728 Sum_probs=199.0
Q ss_pred ccCCCcchhHhhhHhhhccccccccCCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHH
Q 024606 8 RMSSIPGDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 87 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a 87 (265)
..+.+..+|.+++++|++.+ ++.+.++++||+||+||+||||++|++++++|.++++|++||||+++ +.++|
T Consensus 78 ~~~~L~~~l~~la~~l~m~~---~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~-----~~~~A 149 (302)
T 3o1l_A 78 DLDGFREAFTPIAEEFSMDW---RITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQD-----LRSMV 149 (302)
T ss_dssp CHHHHHHHHHHHHHHHTCEE---EEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSST-----THHHH
T ss_pred CHHHHHHHHHHHHHHhCCee---eecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHH-----HHHHH
Confidence 45567789999999998754 44456778999999999999999999999999999999999999843 36789
Q ss_pred HHcCCCEEEECCCCCc---hHHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHH
Q 024606 88 ERHGIPYHYLCAKENE---REEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFL 162 (265)
Q Consensus 88 ~~~gIP~~~~~~~~~~---~~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il 162 (265)
+++|||++.++.+... .++++.+.++ ++|++|+||||+ |||++++
T Consensus 150 ~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~DliVlagym~------------------------------IL~~~~l 199 (302)
T 3o1l_A 150 EWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVVVLARYMQ------------------------------ILPPQLC 199 (302)
T ss_dssp HTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEEEESSCCS------------------------------CCCTTHH
T ss_pred HHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEEEHhHhhh------------------------------hcCHHHH
Confidence 9999999987643222 2467888887 899999999999 9999999
Q ss_pred hhcCCCeEEecCCCCCCCCCCcHHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 024606 163 RSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCL 242 (265)
Q Consensus 163 ~~~~~~~iNiHpslLP~yRG~~pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll 242 (265)
+.+++++||+|||+||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.+++++
T Consensus 200 ~~~~~~~INiHpSlLP~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~~v~I~~~dt~~~L~~r~~~~e~~~l 279 (302)
T 3o1l_A 200 REYAHQVINIHHSFLPSFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQDVVRVSHRDSIENMVRFGRDVEKMVL 279 (302)
T ss_dssp HHTTTCEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhhCCeEEeCcccccCCCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeeecCCceeeC
Q 024606 243 AKAIKSYCELRVLPYEMNKTVVF 265 (265)
Q Consensus 243 ~~ai~~i~~g~~~~~~~~k~vv~ 265 (265)
+++++++.+|++.... ||||||
T Consensus 280 ~~av~~~~~~~v~~~~-~~~~vf 301 (302)
T 3o1l_A 280 ARGLRAHLEDRVLVHD-NKTVVF 301 (302)
T ss_dssp HHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHHHhCCEEEcC-CEEEEc
Confidence 9999999999999875 999998
No 5
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=9.4e-53 Score=386.44 Aligned_cols=226 Identities=42% Similarity=0.685 Sum_probs=201.5
Q ss_pred CCCCcc--ccCCCcchhHhhhHhhhccccccccCCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCC
Q 024606 2 FSCPRK--RMSSIPGDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP 79 (265)
Q Consensus 2 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~ 79 (265)
|++|.. ..+.+..+|.+++++|++.+ ++.+.+.++||+||+||+||||++|++++++|.++++|++||||++.
T Consensus 54 ~~~~~~~~~~~~L~~~f~~la~~~~m~~---~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~-- 128 (288)
T 3obi_A 54 FNAAAKVIPLASLRTGFGVIAAKFTMGW---HMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPR-- 128 (288)
T ss_dssp EEESSCCCCHHHHHHHHHHHHHHTTCEE---EEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCG--
T ss_pred EEcCCCCCCHHHHHHHHHHHHHHcCCEE---EeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCCh--
Confidence 344542 45567789999999998754 44456778999999999999999999999999999999999999821
Q ss_pred CcHHHHHHHHcCCCEEEECCCCCch---HHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCccccccc
Q 024606 80 NSHVIRFLERHGIPYHYLCAKENER---EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFN 154 (265)
Q Consensus 80 ~~~v~~~a~~~gIP~~~~~~~~~~~---~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~ 154 (265)
.+.++|+++|||++.++.+...+ ++++.+.++ ++|++|+||||+
T Consensus 129 --~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivlagy~~----------------------------- 177 (288)
T 3obi_A 129 --ETFSGFDFGDIPFYHFPVNKDTRRQQEAAITALIAQTHTDLVVLARYMQ----------------------------- 177 (288)
T ss_dssp --GGSCCTTTTTCCEEECCCCTTTHHHHHHHHHHHHHHHTCCEEEESSCCS-----------------------------
T ss_pred --hHHHHHHHcCCCEEEeCCCcccHHHHHHHHHHHHHhcCCCEEEhhhhhh-----------------------------
Confidence 24578999999999887543222 457788887 899999999999
Q ss_pred ccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHH
Q 024606 155 MILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKS 234 (265)
Q Consensus 155 ~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl 234 (265)
|||+++++.+++++||+|||+||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+
T Consensus 178 -il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q~~v~i~~~dt~~~L~~r~ 256 (288)
T 3obi_A 178 -ILSDEMSARLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERISHRDTPADLVRKG 256 (288)
T ss_dssp -CCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHH
T ss_pred -hCCHHHHhhhcCCeEEeCcccccCCCCchHHHHHHHcCCCEEEEEEEEECCCCcCCCeEEEEEEecCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCeeeecCCceeeC
Q 024606 235 EDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265 (265)
Q Consensus 235 ~~~~~~ll~~ai~~i~~g~~~~~~~~k~vv~ 265 (265)
.+.++++++++++++.+|++.... ||||||
T Consensus 257 ~~~e~~~l~~av~~~~~~~~~~~~-~~~~vf 286 (288)
T 3obi_A 257 RDIERRVLSRALHYHLDDRVILNG-RKTVVF 286 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCEEEcC-CEEEEc
Confidence 999999999999999999999875 999998
No 6
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=100.00 E-value=2.5e-50 Score=356.54 Aligned_cols=195 Identities=31% Similarity=0.487 Sum_probs=178.7
Q ss_pred CCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--
Q 024606 36 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 113 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~-- 113 (265)
.+++||+||+||+|+|++++++++.++.++++|++|+||+ +++.++++|+++|||++.++.+. .+++++.+.++
T Consensus 6 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~---~~a~~l~~A~~~gIp~~~~~~~~-~~~~~~~~~L~~~ 81 (215)
T 3kcq_A 6 KKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNN---AEARGLLIAQSYGIPTFVVKRKP-LDIEHISTVLREH 81 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCBTT-BCHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCC---cchHHHHHHHHcCCCEEEeCccc-CChHHHHHHHHHh
Confidence 4578999999999999999999999998889999999987 45567899999999999876432 23577888887
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHHhC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 193 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~~G 193 (265)
++|++|++|||+ |||+++++.+++++||+|||+||+|||++|++||+.+|
T Consensus 82 ~~Dlivlagy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 82 DVDLVCLAGFMS------------------------------ILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp TCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHT
T ss_pred CCCEEEEeCCce------------------------------EeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcC
Confidence 899999999999 99999999999999999999999999999999999999
Q ss_pred CCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 024606 194 VKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 264 (265)
Q Consensus 194 ~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~vv 264 (265)
++++|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.++++++++++++.+|++...+.+||++
T Consensus 132 ~~~tGvTvh~v~~~lD~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~e~~ll~~~l~~~~~g~~~~~~~~~~~~ 202 (215)
T 3kcq_A 132 VKIAGCTLHYVYQELDAGPIIMQAAVPVLREDTAESLASRILAAEHVCYPKGVKLIAQDKIKLCDDGTVQC 202 (215)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECTTSCEEE
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999845588865
No 7
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=100.00 E-value=4.2e-50 Score=355.07 Aligned_cols=194 Identities=28% Similarity=0.443 Sum_probs=177.1
Q ss_pred CCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCC-Cch---HHHHHHH
Q 024606 36 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLEL 111 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~l~~~ 111 (265)
..++||+||+||+||||++|++++++| ++++|++|+||+ +++..+++|+++|||++.++.+. ..+ ++++.+.
T Consensus 3 ~~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~---~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 78 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNR---ADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKT 78 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESC---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCC---cchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHH
Confidence 457899999999999999999999999 899999999998 45678899999999999876432 222 5678888
Q ss_pred hh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHH
Q 024606 112 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQA 189 (265)
Q Consensus 112 l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~a 189 (265)
++ ++|++|++|||+ |||+++++.+++++||+|||+||+|||.+|++||
T Consensus 79 l~~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~A 128 (215)
T 3tqr_A 79 IDHYDPKLIVLAGFMR------------------------------KLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERA 128 (215)
T ss_dssp HHTTCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHH
T ss_pred HHhcCCCEEEEccchh------------------------------hCCHHHHhhccCCeEEeCcccCCCCCChhHHHHH
Confidence 87 799999999999 9999999999999999999999999999999999
Q ss_pred HHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 024606 190 FDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 264 (265)
Q Consensus 190 i~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~vv 264 (265)
+.+|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++++++.+|++++.+ +|+.+
T Consensus 129 i~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~ 202 (215)
T 3tqr_A 129 LAAGETEHGVSVHYVTEDLDAGPLICQARLSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGRLNYHN-NQVFL 202 (215)
T ss_dssp HHTTCSEEEEEEEECC-CTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEE
T ss_pred HHcCCCeEEEEEEEEcCCCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEecC-CEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999864 77653
No 8
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=100.00 E-value=8.1e-50 Score=352.31 Aligned_cols=193 Identities=28% Similarity=0.413 Sum_probs=178.3
Q ss_pred ceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCC-CCch---HHHHHHHhh-
Q 024606 39 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 113 (265)
Q Consensus 39 ~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~l~~~l~- 113 (265)
+||+||+||+||||++|+++++++.++++|++|+|+++ ++.++++|+++|||++.++.+ .+.+ ++++.+.++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKA---DAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCT---TCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCC---chHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 59999999999999999999999988899999999984 567899999999999986532 1222 467888887
Q ss_pred -CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHHh
Q 024606 114 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 192 (265)
Q Consensus 114 -~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~~ 192 (265)
++|++|++|||+ |||+++++.+++++||+|||+||+|||++|++||+++
T Consensus 78 ~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~yrG~~pi~~ai~~ 127 (212)
T 1jkx_A 78 YAPDVVVLAGFMR------------------------------ILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALEN 127 (212)
T ss_dssp GCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHT
T ss_pred cCCCEEEEeChhh------------------------------hCCHHHHhhccCCEEEEccCcccCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceeeC
Q 024606 193 GVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 265 (265)
Q Consensus 193 G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~vv~ 265 (265)
|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++++.+.+|++.+.+ +|++++
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~~ 199 (212)
T 1jkx_A 128 GDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHE-NAAWLD 199 (212)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEET
T ss_pred CCCceEEEEEEEcccccCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCceEeC-CEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999999885 888764
No 9
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=100.00 E-value=1.1e-49 Score=350.74 Aligned_cols=192 Identities=32% Similarity=0.454 Sum_probs=175.0
Q ss_pred ceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCC-CCch---HHHHHHHhh-
Q 024606 39 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 113 (265)
Q Consensus 39 ~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~l~~~l~- 113 (265)
+|||||+||+|+||++|+++++++.++++|++|||+++ ++.++++|+++|||++.++.+ .+.+ ++++.+.++
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKA---AVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE 77 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESST---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCC---ChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh
Confidence 59999999999999999999999988899999999984 457789999999999876643 2222 356777777
Q ss_pred -CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHHh
Q 024606 114 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 192 (265)
Q Consensus 114 -~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~~ 192 (265)
++|++|++|||+ |||+++++.++.++||+|||+||+|||++|++|||++
T Consensus 78 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~ 127 (209)
T 1meo_A 78 FSIDIVCLAGFMR------------------------------ILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALET 127 (209)
T ss_dssp TTCCEEEEESCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHH
T ss_pred cCCCEEEEcchhh------------------------------hCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCcee
Q 024606 193 GVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTV 263 (265)
Q Consensus 193 G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~v 263 (265)
|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+.++++++++++.+.+|++.+.+||||+
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~~~~~~ 198 (209)
T 1meo_A 128 GVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKIC 198 (209)
T ss_dssp TCSEEEEEEEECCC---CCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTSEEECTTSSEE
T ss_pred CCCcEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999989985
No 10
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=100.00 E-value=8.4e-50 Score=352.27 Aligned_cols=190 Identities=31% Similarity=0.489 Sum_probs=175.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCC-CCch---HHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~l~~~l~ 113 (265)
|+|||||+||+||||++|++++++|.++++|++||||+ ++++++++|+++|||++.++.+ .+.+ ++++.+.++
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~---~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 78 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDK---PGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLK 78 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESC---SSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECC---CCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHH
Confidence 58999999999999999999999999999999999987 5689999999999999876643 2223 467888887
Q ss_pred --CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHH
Q 024606 114 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 191 (265)
Q Consensus 114 --~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~ 191 (265)
++|++|++|||+ |||+++++.++.++||+|||+||+|||++|++||+.
T Consensus 79 ~~~~Dliv~agy~~------------------------------Il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 128 (211)
T 3p9x_A 79 EKQIDFVVLAGYMR------------------------------LVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIR 128 (211)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEeCchh------------------------------hcCHHHHhhccCCeEEECCccCCCCCCccHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 024606 192 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 260 (265)
Q Consensus 192 ~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~ 260 (265)
+|++++|+|+|+|++++|+||||.|++++|.++||.++|.+|+.+.++++++++|+++.+|+...+=|.
T Consensus 129 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~~~ 197 (211)
T 3p9x_A 129 ANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAENLYFQS 197 (211)
T ss_dssp TTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCTTTCCSCCC
T ss_pred cCCCeEEEEEEEEcCCCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999988876443
No 11
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=100.00 E-value=2.8e-49 Score=352.66 Aligned_cols=204 Identities=28% Similarity=0.440 Sum_probs=184.9
Q ss_pred cccccCCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCC-Cch--
Q 024606 28 SVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER-- 104 (265)
Q Consensus 28 ~~~~~~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~-- 104 (265)
|--+..+.+.|+||+||+||+|+|++++++++.++.++++|++|||++ ++++++++|+++|||++.++.+. +.+
T Consensus 12 ~~~~~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~ 88 (229)
T 3auf_A 12 SGENLYFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDR---ADAYGLERARRAGVDALHMDPAAYPSRTA 88 (229)
T ss_dssp CSBSSSCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESS---TTCHHHHHHHHTTCEEEECCGGGSSSHHH
T ss_pred ccccccccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCC---CchHHHHHHHHcCCCEEEECcccccchhh
Confidence 334456677789999999999999999999999887779999999987 45678999999999998765322 222
Q ss_pred -HHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCC
Q 024606 105 -EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFK 181 (265)
Q Consensus 105 -~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yR 181 (265)
++++.+.++ ++|++|++|||+ |||+++++.++.++||+|||+||+||
T Consensus 89 ~~~~~~~~l~~~~~Dliv~agy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yr 138 (229)
T 3auf_A 89 FDAALAERLQAYGVDLVCLAGYMR------------------------------LVRGPMLTAFPNRILNIHPSLLPAFP 138 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCCS------------------------------CCCHHHHHHSTTCEEEEESSCTTSSC
T ss_pred ccHHHHHHHHhcCCCEEEEcChhH------------------------------hCCHHHHhhccCCEEEEccCcCcCCC
Confidence 467788887 899999999999 99999999999999999999999999
Q ss_pred CCcHHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 182 GGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 182 G~~pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
|++|++|||++|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+.++++++++|+++.+|++.+.+ +|
T Consensus 139 G~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~-~~ 217 (229)
T 3auf_A 139 GLEAQRQALEHGVKVAGCTVHFVTAGVDEGPIILQAAVPVLEGDTVEDLRRRILAEEHRIYPEAIRLFAEGRLVIEG-RR 217 (229)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TE
T ss_pred CcCHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeC-CE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999874 99
Q ss_pred eeeC
Q 024606 262 TVVF 265 (265)
Q Consensus 262 ~vv~ 265 (265)
|+++
T Consensus 218 ~~~~ 221 (229)
T 3auf_A 218 VRIL 221 (229)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9875
No 12
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=100.00 E-value=1.9e-49 Score=349.54 Aligned_cols=191 Identities=28% Similarity=0.450 Sum_probs=169.0
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCC-Cch---HHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~l~~~l~ 113 (265)
++||+||+||+|+|+++++++++++.++++|++||||+ +++.++++|+++|||++.++.+. +.+ ++++.+.++
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~---~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 83 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDK---AEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALD 83 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECC---cccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 57999999999999999999999998899999999987 45567899999999999876432 222 467888887
Q ss_pred --CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHH
Q 024606 114 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 191 (265)
Q Consensus 114 --~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~ 191 (265)
++|++|++|||+ |||+++++.+++++||+|||+||+|||.+|++||+.
T Consensus 84 ~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 133 (209)
T 4ds3_A 84 VLKPDIICLAGYMR------------------------------LLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALD 133 (209)
T ss_dssp HHCCSEEEESSCCS------------------------------CCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEecccc------------------------------CcCHHHHhhccCCeEEECCccccCCCChhHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCe---eeecCCce
Q 024606 192 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV---LPYEMNKT 262 (265)
Q Consensus 192 ~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~---~~~~~~k~ 262 (265)
+|++++|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.++++++++++++.+|++ ... ++||
T Consensus 134 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~~~~~~~-~~~~ 206 (209)
T 4ds3_A 134 AGMKLAGCTVHLVTEGMDEGPILAQAAVPVLDGDTAETLAARVLKAEHRLYPLALQKFAAGEKASNQFS-DGMV 206 (209)
T ss_dssp TTCSEEEEEEEECCC--CCCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CC
T ss_pred cCCCeEEEEEEEEcCCCCCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeeee-CCEe
Confidence 999999999999999999999999999999999999999999999999999999999999998 654 4776
No 13
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=100.00 E-value=3.5e-49 Score=349.18 Aligned_cols=193 Identities=24% Similarity=0.347 Sum_probs=175.3
Q ss_pred CCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCC-Cch---HHHHHH
Q 024606 35 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLE 110 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~l~~ 110 (265)
++.++||+||+||+|+||++|++++.+ .++++|++|+||++ ++++++|+++|||++..+.+. ..+ ++++.+
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~~----a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~ 83 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDRE----CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITA 83 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESSC----CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHH
T ss_pred CCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCCc----hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHH
Confidence 466889999999999999999999754 56789999999984 678999999999999875331 122 467888
Q ss_pred Hhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHH
Q 024606 111 LVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 188 (265)
Q Consensus 111 ~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ 188 (265)
.++ ++|++|++|||+ |||+++++.|++++||+|||+||+|||++|++|
T Consensus 84 ~l~~~~~Dlivlagy~~------------------------------iL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ 133 (215)
T 3da8_A 84 ATAAHEPDLVVSAGFMR------------------------------ILGPQFLSRFYGRTLNTHPALLPAFPGTHGVAD 133 (215)
T ss_dssp HHHTTCCSEEEEEECCS------------------------------CCCHHHHHHHTTTEEEEESSCTTSSCSTTHHHH
T ss_pred HHHhhCCCEEEEcCchh------------------------------hCCHHHHhhccCCeEEeCcccccCCCCchHHHH
Confidence 887 899999999999 999999999999999999999999999999999
Q ss_pred HHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCcee
Q 024606 189 AFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTV 263 (265)
Q Consensus 189 ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~v 263 (265)
|+.+|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+.+++++.++++++.+|++...+ +|++
T Consensus 134 Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~ 207 (215)
T 3da8_A 134 ALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVG-RTAT 207 (215)
T ss_dssp HHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEET-TEEE
T ss_pred HHHcCCCeEEEEEEEEcCCCCCCCEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999853 6654
No 14
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=100.00 E-value=1.2e-48 Score=345.31 Aligned_cols=193 Identities=31% Similarity=0.474 Sum_probs=176.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCC-CCch---HHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~l~~~l~ 113 (265)
|+||+||+||+|+|++++++++.++.++++|++|||+++ ++.++++|+++|||++.++.+ .+.+ ++++.+.++
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~ 77 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNP---KAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELK 77 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCT---TCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCC---ChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHH
Confidence 479999999999999999999988876779999999984 567899999999999976543 2222 467788887
Q ss_pred --CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHH
Q 024606 114 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 191 (265)
Q Consensus 114 --~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~ 191 (265)
++|++|++|||+ |||+++++.+++++||+|||+||+|||++|++|||+
T Consensus 78 ~~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~ 127 (216)
T 2ywr_A 78 KKGVELVVLAGFMR------------------------------ILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVE 127 (216)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHH
T ss_pred hcCCCEEEEeCchh------------------------------hCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 024606 192 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 264 (265)
Q Consensus 192 ~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~vv 264 (265)
+|++++|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+.+++++.++++++.+|++...+ +|+++
T Consensus 128 ~G~~~tGvTvh~v~~~~D~G~Ii~q~~~~i~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~ 199 (216)
T 2ywr_A 128 FGVKFSGCTVHIVDESVDAGPVIVQAVVPVLPEDDENTLADRILKWEHKILPQTVQWFAQDRIIIDG-RKVIV 199 (216)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEE
T ss_pred cCCCeEEEEEEEEcccCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecC-CeeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999875 88865
No 15
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.1e-47 Score=338.53 Aligned_cols=186 Identities=26% Similarity=0.494 Sum_probs=167.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCC-Cch---HHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~l~~~l~ 113 (265)
|+||+||+||+|+|++++++++.++.++++|++|+|++ ++++++++|+++|||++.++.+. +.+ ++++.+.++
T Consensus 3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~---~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~ 79 (212)
T 3av3_A 3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDR---PGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELK 79 (212)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESS---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCC---CCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHH
Confidence 58999999999999999999999888789999999987 35689999999999998765432 222 457778887
Q ss_pred --CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHH
Q 024606 114 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 191 (265)
Q Consensus 114 --~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~ 191 (265)
++|++|++|||+ |||+++++.+++++||+|||+||+|||++|++||+.
T Consensus 80 ~~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 129 (212)
T 3av3_A 80 GRQIDWIALAGYMR------------------------------LIGPTLLSAYEGKIVNIHPSLLPAFPGKDAIGQAYR 129 (212)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHTTTCEEEEESSCTTSSCSTTHHHHHHH
T ss_pred hcCCCEEEEchhhh------------------------------hCCHHHHhhhcCCEEEEecCcCCCCCCcCHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeee
Q 024606 192 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLP 256 (265)
Q Consensus 192 ~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~ 256 (265)
+|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+.+++++.++++.+.+|+++.
T Consensus 130 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~~~ 194 (212)
T 3av3_A 130 AGVSETGVTVHYVDEGMDTGPVIAQRVVPIVPGEPIEALEERIHQVEHELYPTVLRMLLGEKEQQ 194 (212)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred cCCCeEEEEEEEECCCCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999877654
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=100.00 E-value=6.6e-44 Score=330.96 Aligned_cols=186 Identities=23% Similarity=0.323 Sum_probs=168.9
Q ss_pred CCceEEEEEeCC--chhHHHHHHHHHcCCCCceEEEEeeCCCCCC-------CcHHHHHHHHcCCCEEEECCCCCchHHH
Q 024606 37 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 37 ~~~rIav~~Sg~--g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
++|||+||||+. ..||++|++. | ++|++|||++|++. .+++.++|+++|||++. +.+ .++++
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~--~~~~~ 72 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---G---HNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-PVS--LRPQE 72 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---T---CEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-CSC--SCSHH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-cCC--CCCHH
Confidence 469999999998 5789999875 3 79999999987653 37899999999999974 322 33567
Q ss_pred HHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcH
Q 024606 108 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 185 (265)
Q Consensus 108 l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~p 185 (265)
+.+.++ ++|++|+++||+ |||+++++.+++++||+|||+||+|||++|
T Consensus 73 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~p 122 (314)
T 1fmt_A 73 NQQLVAELQADVMVVVAYGL------------------------------ILPKAVLEMPRLGCINVHGSLLPRWRGAAP 122 (314)
T ss_dssp HHHHHHHTTCSEEEEESCCS------------------------------CCCHHHHHSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeeccc------------------------------cCCHHHHhhccCCEEEEcCCcCcCCCCcCH
Confidence 777776 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 186 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 186 i~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
++|||++|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++|+.+.+|++.+.+|+.
T Consensus 123 i~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~~ 198 (314)
T 1fmt_A 123 IQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDE 198 (314)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCCCG
T ss_pred HHHHHHcCCCceEEEEEEEcccCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988864
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=100.00 E-value=7.5e-44 Score=329.31 Aligned_cols=184 Identities=21% Similarity=0.273 Sum_probs=166.5
Q ss_pred ceEEEEEeCC--chhHHHHHHHHHcCCCCceEEEEeeCCCCCC----CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 39 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 39 ~rIav~~Sg~--g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
|||+||||+. ++||++|+++ +++|++|||+++++. .++++++|+++|||++...+ .+++++.+.+
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~------~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~---~~~~~~~~~l 71 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN---VNHPLWVERI 71 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSC---CCSHHHHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC------CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCc---CCcHHHHHHH
Confidence 7999999997 6799999876 479999999987653 36799999999999986432 2345677777
Q ss_pred h--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHH
Q 024606 113 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 190 (265)
Q Consensus 113 ~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai 190 (265)
+ ++|++|+++||+ |||+++|+.+++++||+|||+||+|||++|++|||
T Consensus 72 ~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~ai 121 (305)
T 2bln_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (305)
T ss_dssp HHTCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHH
T ss_pred HhcCCCEEEEecccc------------------------------ccCHHHHhcCcCCEEEecCCcCcCCCCccHHHHHH
Confidence 6 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 191 DAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 191 ~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
++|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++++.+.+|++.+.+|+.
T Consensus 122 ~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~~ 192 (305)
T 2bln_A 122 VNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRE 192 (305)
T ss_dssp HTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCCCG
T ss_pred HcCCCcEEEEEEEECCCccCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888864
No 18
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=5.3e-43 Score=325.40 Aligned_cols=187 Identities=26% Similarity=0.388 Sum_probs=168.5
Q ss_pred CCCceEEEEEeCCch--hHHHHHHHHHcCCCCceEEEEeeCCCCCC-------CcHHHHHHHHcCCCEEEECCCCCchHH
Q 024606 36 DPKYKVAVLASKQEH--CLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREE 106 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~ 106 (265)
++||||+||||...+ +|++|++. .++|++|||++|++. .+++.++|+++|||++. +.+ .+++
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~-~~~--~~~~ 72 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED------GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQ-PLR--IREK 72 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT------TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEEC-CSC--TTSH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC------CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEc-ccc--CCCH
Confidence 578999999999864 78888765 379999999987642 47899999999999874 322 2334
Q ss_pred HHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCc
Q 024606 107 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 184 (265)
Q Consensus 107 ~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~ 184 (265)
+.++.++ ++|++|+++||+ |||+++|+.+++++||+|||+||+|||++
T Consensus 73 ~~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~ 122 (317)
T 3rfo_A 73 DEYEKVLALEPDLIVTAAFGQ------------------------------IVPNEILEAPKYGCINVHASLLPELRGGA 122 (317)
T ss_dssp HHHHHHHHHCCSEEEESSCCS------------------------------CCCHHHHHSSTTCEEEEESSCTTSSBSSC
T ss_pred HHHHHHHhcCCCEEEEcCchh------------------------------hCCHHHHhhCcCCEEEECCccCcCCCCcC
Confidence 5566665 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 185 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 185 pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
|++|||++|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++++.+.+|++.+.+|+.
T Consensus 123 pi~~Ai~~G~~~tGvTih~~~~~~DtG~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~~ 199 (317)
T 3rfo_A 123 PIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKLEPIKQNE 199 (317)
T ss_dssp HHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCCCG
T ss_pred HHHHHHHcCCCceEEEEEEEcccCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988874
No 19
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=8.4e-43 Score=323.61 Aligned_cols=186 Identities=21% Similarity=0.285 Sum_probs=166.7
Q ss_pred CceEEEEEeCCch--hHHHHHHHHHcCCCCceEEEEeeCCCCCC-------CcHHHHHHHHcCCCEEEECCCCCchHHHH
Q 024606 38 KYKVAVLASKQEH--CLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEEL 108 (265)
Q Consensus 38 ~~rIav~~Sg~g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~l 108 (265)
+|||+||||...+ +|++|+++ .++|++|+|++|++. .+++.++|+++|||++. +.+ .+++++
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~-~~~--~~~~~~ 72 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS------SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQ-PFS--LRDEVE 72 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS------SSEEEEEECCCC----------CCHHHHHHHHTTCCEEC-CSC--SSSHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEEC-ccc--CCCHHH
Confidence 5899999999764 68888764 379999999887653 47899999999999874 322 344677
Q ss_pred HHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHH
Q 024606 109 LELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 186 (265)
Q Consensus 109 ~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi 186 (265)
.+.++ ++|++|+++||+ |||+++++.+++++||+|||+||+|||++|+
T Consensus 73 ~~~l~~~~~Dliv~~~~~~------------------------------ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi 122 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVAYGL------------------------------ILPKKALNAFRLGCVNVHASLLPRWRGAAPI 122 (314)
T ss_dssp HHHHHTTCCSEEEEESCCS------------------------------CCCHHHHTSSTTCEEEEESSCTTTTBSSCHH
T ss_pred HHHHHhcCCCEEEEcCccc------------------------------ccCHHHHhhCcCCEEEecCccccCCCCccHH
Confidence 78887 899999999999 9999999999999999999999999999999
Q ss_pred HHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCce
Q 024606 187 KQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKT 262 (265)
Q Consensus 187 ~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k~ 262 (265)
+|||++|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++++.+.+|++.+.+|+..
T Consensus 123 ~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~~~ 198 (314)
T 3tqq_A 123 QRAILAGDRETGISIMQMNEGLDTGDVLAKSACVISSEDTAADLHDRLSLIGADLLLESLAKLEKGDIKLEKQDEA 198 (314)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCCCGG
T ss_pred HHHHHcCCCeeEEEEEeeecCCCCCCEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888753
No 20
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=100.00 E-value=5.1e-43 Score=325.61 Aligned_cols=185 Identities=19% Similarity=0.288 Sum_probs=166.2
Q ss_pred CceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCC-------CcHHHHHHHHcCCCEEEECCCCCchHHHH
Q 024606 38 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEEL 108 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~l 108 (265)
+|||+||||+.. .||++|+++ .++|++|||++|++. .+++.++|+++|||++. +.+ .+++++
T Consensus 7 ~mrivf~Gt~~fa~~~L~~L~~~------~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~--~~~~~~ 77 (318)
T 3q0i_A 7 SLRIVFAGTPDFAARHLAALLSS------EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQ-PEN--FKSDES 77 (318)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTS------SSEEEEEECCCC---------CCCHHHHHHHHTTCCEEC-CSC--SCSHHH
T ss_pred CCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEc-cCc--CCCHHH
Confidence 589999999874 478888764 379999999987653 47899999999999874 322 344677
Q ss_pred HHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHH
Q 024606 109 LELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 186 (265)
Q Consensus 109 ~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi 186 (265)
.+.++ ++|++|+++||+ |||+++++.+++++||+|||+||+|||++|+
T Consensus 78 ~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~pi 127 (318)
T 3q0i_A 78 KQQLAALNADLMVVVAYGL------------------------------LLPKVVLDTPKLGCINVHGSILPRWRGAAPI 127 (318)
T ss_dssp HHHHHTTCCSEEEESSCCS------------------------------CCCHHHHTSSTTCEEEEESSSTTTTBSSCHH
T ss_pred HHHHHhcCCCEEEEeCccc------------------------------cCCHHHHhhCcCCEEEeCCccCcCCCCcCHH
Confidence 88887 899999999999 9999999999999999999999999999999
Q ss_pred HHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 187 KQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 187 ~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
+|||++|++++|+|+|+|++++|+||||.|++++|.++||.++|++|+.+.+++++.++++.+.+|++.+.+|+.
T Consensus 128 ~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~~ 202 (318)
T 3q0i_A 128 QRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTAVAVKQDD 202 (318)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCCCG
T ss_pred HHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988875
No 21
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=100.00 E-value=2.5e-41 Score=315.46 Aligned_cols=189 Identities=16% Similarity=0.188 Sum_probs=163.4
Q ss_pred CceEEEEEeCCchhHH-HHHHHHHcCCCCceEEEEeeCCCCC-CCcHHHHHHHHcCCCEEEECCCC--CchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLV-DFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKE--NEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~-~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~~~a~~~gIP~~~~~~~~--~~~~~~l~~~l~ 113 (265)
+|||+|||+ +++. .+|+++.+. .++|++|+|.+|++ ..+++.++|+++|||++..+... ...++++++.++
T Consensus 22 ~mrIvf~G~---~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~l~ 96 (329)
T 2bw0_A 22 SMKIAVIGQ---SLFGQEVYCHLRKE--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQ 96 (329)
T ss_dssp CCEEEEECC---HHHHHHHHHHHHHT--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHH
T ss_pred CCEEEEEcC---cHHHHHHHHHHHHC--CCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHHHH
Confidence 389999964 3444 355655544 37999999988764 24789999999999998754311 112367778776
Q ss_pred --CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHHH
Q 024606 114 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 191 (265)
Q Consensus 114 --~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai~ 191 (265)
++|++|+++||+ |||+++|+.+++++||+|||+||+|||++|++|||+
T Consensus 97 ~~~~Dliv~a~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai~ 146 (329)
T 2bw0_A 97 ALGAELNVLPFCSQ------------------------------FIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLI 146 (329)
T ss_dssp TTCCSEEEESSCSS------------------------------CCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHH
T ss_pred hcCCCEEEEeehhh------------------------------hCCHHHHhhCcCCEEEEcCCcCcCCCCcCHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 192 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKS-EDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 192 ~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl-~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
+|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+ ...+.+++.++++.+.+|++.+.+|+.
T Consensus 147 ~G~~~tGvTvh~~~~~lDtG~Ii~Q~~v~I~~~dt~~~L~~r~l~~~~~~ll~~~l~~l~~g~~~~~~Q~~ 217 (329)
T 2bw0_A 147 HGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPE 217 (329)
T ss_dssp TTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCCCCBCCCS
T ss_pred cCCCcEEEEEEEECCcCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCc
Confidence 9999999999999999999999999999999999999999994 889999999999999999998888764
No 22
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=5.7e-41 Score=334.41 Aligned_cols=184 Identities=21% Similarity=0.273 Sum_probs=167.0
Q ss_pred ceEEEEEeCC--chhHHHHHHHHHcCCCCceEEEEeeCCCCCC----CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 39 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 39 ~rIav~~Sg~--g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
|||+||||+. ++||++|+++ +++|++|||+++++. .++++++|+++|||++..++ .+++++.+.+
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~---~~~~~~~~~l 71 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN---VNHPLWVERI 71 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC--------CCHHHHHHHHTCCEECCSC---TTSHHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCC---CCcHHHHHHH
Confidence 6999999998 7899999986 489999999987643 26799999999999986443 2345677777
Q ss_pred h--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHHHHHH
Q 024606 113 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 190 (265)
Q Consensus 113 ~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi~~ai 190 (265)
+ ++|++|++|||+ |||+++|+.+++++||+||||||+|||++|++|||
T Consensus 72 ~~~~~d~iv~~~~~~------------------------------il~~~~l~~~~~~~iNiH~slLP~~rG~~p~~~ai 121 (660)
T 1z7e_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (660)
T ss_dssp HHHCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHH
T ss_pred HhcCCCEEEEcCccc------------------------------ccCHHHHhcCCCCeEEecCCcCCCCCCccHHHHHH
Confidence 6 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCc
Q 024606 191 DAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 261 (265)
Q Consensus 191 ~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~~~~~~~k 261 (265)
++|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+.+++++.++|+.+.+|++.+.+|+.
T Consensus 122 ~~g~~~~G~t~~~~~~~~D~G~ii~q~~~~i~~~dt~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~q~~ 192 (660)
T 1z7e_A 122 VNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRE 192 (660)
T ss_dssp HTTCSEEEEEEEECCSSTTTSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCBCCCG
T ss_pred HcCCCcEEEEEEEECCCccCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988864
No 23
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.97 E-value=3.7e-31 Score=239.77 Aligned_cols=116 Identities=16% Similarity=0.266 Sum_probs=104.5
Q ss_pred HHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCc
Q 024606 107 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 184 (265)
Q Consensus 107 ~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~ 184 (265)
++.+.|+ ++|++|++|||+ |||+++++. .++||+|||+||+|||++
T Consensus 68 ~~~~~L~~~~pDliv~~~y~~------------------------------ilp~~il~~--~g~iNiHpSLLP~yRG~~ 115 (260)
T 1zgh_A 68 LTFEKVKLINPEYILFPHWSW------------------------------IIPKEIFEN--FTCVVFHMTDLPFGRGGS 115 (260)
T ss_dssp CCHHHHHHHCCSEEEESSCCS------------------------------CCCHHHHTT--SCEEEEESSCTTTTEESC
T ss_pred HHHHHHHhcCCCEEEEecccc------------------------------ccCHHHHcc--CCEEEEeCCcCCCCCCcC
Confidence 3444554 899999999999 888999986 579999999999999999
Q ss_pred HHHHHHHhCCCEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhCCeeeecCC
Q 024606 185 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK-QCLAKAIKSYCELRVLPYEMN 260 (265)
Q Consensus 185 pi~~ai~~G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~-~ll~~ai~~i~~g~~~~~~~~ 260 (265)
|++|||++|++++|||+|+|++++|+||||.|+.++|. ||.++|++|+.+++. +++.++ .+|++.+.+|+
T Consensus 116 pi~~Ai~~G~~~tGvTih~~~~~lDtG~Ii~Q~~v~I~--dt~~~L~~rl~~~~~~~ll~~~----~~g~~~~~pQ~ 186 (260)
T 1zgh_A 116 PLQNLIERGIKKTKISAIKVDGGIDTGDIFFKRDLDLY--GTAEEIFMRASKIIFNDMIPEL----LTKRPVPQKQE 186 (260)
T ss_dssp HHHHHHHTTCCEEEEEEEECCSSSSCSCEEEEEEEECC--SCHHHHHHHHHHHHHHTHHHHH----HHHCCCCBCCC
T ss_pred HHHHHHHcCCCcEEEEEEEEccCccCCCeEEEEEEecc--CCHHHHHHHHHHHHHHHHHHHH----HcCCCcceeCC
Confidence 99999999999999999999999999999999999999 899999999999998 886655 46788887775
No 24
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=95.13 E-value=0.24 Score=45.39 Aligned_cols=119 Identities=16% Similarity=0.227 Sum_probs=70.6
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+.......++.++.. +++++. +++.+.-.++..+. +.|++.|..+.... ++.+.++
T Consensus 148 gl~va~vGD~~~rva~Sl~~~~~~--~g~~v~-~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--------d~~eav~ 216 (307)
T 2i6u_A 148 GLRLSYFGDGANNMAHSLLLGGVT--AGIHVT-VAAPEGFLPDPSVRAAAERRAQDTGASVTVTA--------DAHAAAA 216 (307)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHH--TTCEEE-EECCTTSCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHHT
T ss_pred CeEEEEECCCCcCcHHHHHHHHHH--CCCEEE-EECCccccCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHHhc
Confidence 478999877522224455555432 346664 34433212233343 44558898776543 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|.+. .+.-+..........|.+..++++..+..++-+|| ||.+||
T Consensus 217 ~aDvvy~~~w~sm-------------g~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg 270 (307)
T 2i6u_A 217 GADVLVTDTWTSM-------------GQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHC--LPAHRG 270 (307)
T ss_dssp TCSEEEECCSSCT-------------TCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEEC--SCCCBT
T ss_pred CCCEEEecceecC-------------CcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 9999998888441 00011111222334578999999999889999997 688887
No 25
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.02 E-value=0.02 Score=53.54 Aligned_cols=56 Identities=18% Similarity=0.351 Sum_probs=35.3
Q ss_pred CCCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEE
Q 024606 33 PDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 95 (265)
Q Consensus 33 ~~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~ 95 (265)
|...++.||+|+|+|-|. .-++++.+-.-.+++++|+... .....++|+++|||++
T Consensus 2 ~~~~~~~rv~VvG~G~g~---~h~~a~~~~~~~~elvav~~~~----~~~a~~~a~~~gv~~~ 57 (372)
T 4gmf_A 2 PSASPKQRVLIVGAKFGE---MYLNAFMQPPEGLELVGLLAQG----SARSRELAHAFGIPLY 57 (372)
T ss_dssp -----CEEEEEECSTTTH---HHHHTTSSCCTTEEEEEEECCS----SHHHHHHHHHTTCCEE
T ss_pred CCCCCCCEEEEEehHHHH---HHHHHHHhCCCCeEEEEEECCC----HHHHHHHHHHhCCCEE
Confidence 456788999999998653 2334443221147999888754 3456899999999975
No 26
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=94.63 E-value=0.18 Score=46.47 Aligned_cols=116 Identities=17% Similarity=0.278 Sum_probs=68.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHH----HHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+ +.....++.++.. +++++. +++.+.-.++..+.+ .|++.|..+..... +.+.++
T Consensus 157 glkva~vGD~-~rva~Sl~~~~~~--~G~~v~-~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d--------~~eav~ 224 (323)
T 3gd5_A 157 GLKLAYVGDG-NNVAHSLLLGCAK--VGMSIA-VATPEGFTPDPAVSARASEIAGRTGAEVQILRD--------PFEAAR 224 (323)
T ss_dssp TCEEEEESCC-CHHHHHHHHHHHH--HTCEEE-EECCTTCCCCHHHHHHHHHHHHHHTCCEEEESC--------HHHHHT
T ss_pred CCEEEEECCC-CcHHHHHHHHHHH--cCCEEE-EECCCcccCCHHHHHHHHHHHHHcCCeEEEECC--------HHHHhc
Confidence 5789998766 3224445544322 235653 344332123334443 44567887765431 345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhc--ccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLS--SKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~--~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|.. .+++ .......+..|.+..++++..+..++-+|| ||.+||
T Consensus 225 ~aDvvyt~~wqs---------------~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHc--lPa~Rg 278 (323)
T 3gd5_A 225 GAHILYTDVWTS---------------MGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHC--LPAHRG 278 (323)
T ss_dssp TCSEEEECCCC------------------------CCHHHHTTCCBCHHHHHTSCTTCEEEEC--SCCCBT
T ss_pred CCCEEEEeceec---------------CCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 999999888754 1111 112223445678999999998889999998 478887
No 27
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=94.46 E-value=0.14 Score=47.68 Aligned_cols=117 Identities=15% Similarity=0.234 Sum_probs=66.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-++ .....++.++.. +++++. +++.+.-.++..+. +.|++.|..+.... ++.+.++
T Consensus 179 glkva~vGD~~-nva~Sl~~~~~~--~G~~v~-~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~--------d~~eav~ 246 (340)
T 4ep1_A 179 GIKLAYVGDGN-NVCHSLLLASAK--VGMHMT-VATPVGYRPNEEIVKKALAIAKETGAEIEILH--------NPELAVN 246 (340)
T ss_dssp TCEEEEESCCC-HHHHHHHHHHHH--HTCEEE-EECCTTCCCCHHHHHHHHHHHHHHCCCEEEES--------CHHHHHT
T ss_pred CCEEEEECCCc-hhHHHHHHHHHH--cCCEEE-EECCcccCCCHHHHHHHHHHHHHcCCeEEEEC--------CHHHHhC
Confidence 47888887552 223444444321 235653 34433212233333 34557887776543 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|.. +-+.. + ......+..|.+..++++..+..++-+|| ||.+||
T Consensus 247 ~aDVvyt~~w~s------mg~e~-------~-~~~~~~~~~y~vt~ell~~ak~dai~MHc--LPa~Rg 299 (340)
T 4ep1_A 247 EADFIYTDVWMS------MGQEG-------E-EEKYTLFQPYQINKELVKHAKQTYHFLHC--LPAHRE 299 (340)
T ss_dssp TCSEEEECCC------------C-------H-HHHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCBT
T ss_pred CCCEEEecCccC------CCCCc-------h-HHHHHHhccccCCHHHHHhcCCCcEEECC--CCCCCC
Confidence 999998887743 00000 0 11122345678999999988888999998 488887
No 28
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.19 E-value=0.22 Score=45.79 Aligned_cols=118 Identities=14% Similarity=0.278 Sum_probs=67.8
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+ +.....++.++.. ++.++. +++.+.-.++..+. +.|++.|..+.... ++.+.++
T Consensus 155 gl~va~vGD~-~rva~Sl~~~~~~--~g~~v~-~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~--------d~~eav~ 222 (315)
T 1pvv_A 155 GVKVVYVGDG-NNVAHSLMIAGTK--LGADVV-VATPEGYEPDEKVIKWAEQNAAESGGSFELLH--------DPVKAVK 222 (315)
T ss_dssp TCEEEEESCC-CHHHHHHHHHHHH--TTCEEE-EECCTTCCCCHHHHHHHHHHHHHHTCEEEEES--------CHHHHTT
T ss_pred CcEEEEECCC-cchHHHHHHHHHH--CCCEEE-EECCccccCCHHHHHHHHHHHHHcCCeEEEEe--------CHHHHhC
Confidence 4788988765 2234455555432 346653 33333211233343 34458887765532 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|.+. + +.-+..........|.+..++++..+..++-+|| ||.+||
T Consensus 223 ~aDvvy~~~w~sm---------g----~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~--lP~~Rg 276 (315)
T 1pvv_A 223 DADVIYTDVWASM---------G----QEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHC--LPAHRG 276 (315)
T ss_dssp TCSEEEECCCCCS---------S----TTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEEC--SCCCBT
T ss_pred CCCEEEEcceecc---------C----cccchHHHHHHHHhcCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 9999998888431 0 0000000111223468999999998889999997 688876
No 29
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=94.07 E-value=0.23 Score=45.84 Aligned_cols=120 Identities=14% Similarity=0.244 Sum_probs=67.7
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+.......++.++.. +++++. +++.+.-.++..+. +.|++.|..+.... ++.+.++
T Consensus 167 gl~va~vGD~~~rva~Sl~~~~~~--~G~~v~-~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~--------d~~eav~ 235 (325)
T 1vlv_A 167 GVKVVFMGDTRNNVATSLMIACAK--MGMNFV-ACGPEELKPRSDVFKRCQEIVKETDGSVSFTS--------NLEEALA 235 (325)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHH--TTCEEE-EESCGGGCCCHHHHHHHHHHHHHHCCEEEEES--------CHHHHHT
T ss_pred CcEEEEECCCCcCcHHHHHHHHHH--CCCEEE-EECCccccCCHHHHHHHHHHHHHcCCeEEEEc--------CHHHHHc
Confidence 478999877522234455555432 346663 33332111233343 44558887765542 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhc-CCCeEEecCCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSFKGG 183 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~-~~~~iNiHpslLP~yRG~ 183 (265)
++|+|..-.|.+. + +.-+..........|.+..++++.. +..++-+|| ||.+||.
T Consensus 236 ~aDvvyt~~w~sm---------g----~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~--LP~~Rg~ 291 (325)
T 1vlv_A 236 GADVVYTDVWASM---------G----EEDKEKERMALLKPYQVNERVMEMTGKSETIFMHC--LPAVKGQ 291 (325)
T ss_dssp TCSEEEECCCC-----------------------CHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCCBTT
T ss_pred cCCEEEecccccc---------c----cccchHhHHHHHhhcCCCHHHHHhccCCCeEEECC--CCCCCCc
Confidence 9999988888431 0 0000111112223468999999988 888999997 6888873
No 30
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=94.05 E-value=0.19 Score=45.97 Aligned_cols=118 Identities=16% Similarity=0.233 Sum_probs=67.1
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHH----HHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-++ .....++.++.. ++.++. +++.+.-.++..+.+ .|++.|..+..... +.+.++
T Consensus 146 gl~va~vGD~~-~va~Sl~~~~~~--~G~~v~-~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d--------~~eav~ 213 (307)
T 3tpf_A 146 IAKVAFIGDSN-NMCNSWLITAAI--LGFEIS-IAMPKNYKISPEIWEFAMKQALISGAKISLGYD--------KFEALK 213 (307)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHH--HTCEEE-EECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC--------HHHHHT
T ss_pred CCEEEEEcCCC-ccHHHHHHHHHH--cCCEEE-EECCCccCCCHHHHHHHHHHHHHcCCeEEEEcC--------HHHHhc
Confidence 57888887642 123444444321 235653 333322122333434 44477877765431 345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|..+ ..+... ......+..|.+..++++..+..++-+|| ||.+||
T Consensus 214 ~aDvvyt~~w~sm---g~e~~~----------~~~~~~~~~y~v~~e~l~~a~~~ai~mH~--lPa~Rg 267 (307)
T 3tpf_A 214 DKDVVITDTWVSM---GEENEK----------ERKIKEFEGFMIDEKAMSVANKDAILLHC--LPAYRG 267 (307)
T ss_dssp TCSEEEECCSSCT---TGGGGH----------HHHHHHTGGGCBCHHHHHHSCTTCEEEEC--SCCCBT
T ss_pred CCCEEEecCcccC---CchhhH----------HHHHHHhcccccCHHHHHhcCCCcEEECC--CCCCCC
Confidence 9999998887431 101000 00112234578999999998889999999 478887
No 31
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=93.08 E-value=0.34 Score=44.77 Aligned_cols=120 Identities=18% Similarity=0.225 Sum_probs=67.7
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC--CCcHHHHH----HHH--cCCCEEEECCCCCchHHHHH
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG--PNSHVIRF----LER--HGIPYHYLCAKENEREEELL 109 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~--~~~~v~~~----a~~--~gIP~~~~~~~~~~~~~~l~ 109 (265)
..||+++|-+.......++.++.. ++.++. +++.+.-. ++..+.+. |++ .|..+.... ++.
T Consensus 161 gl~va~vGD~~~~va~Sl~~~~~~--~G~~v~-~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~--------d~~ 229 (328)
T 3grf_A 161 GIKFAYCGDSMNNVTYDLMRGCAL--LGMECH-VCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH--------DCK 229 (328)
T ss_dssp GCCEEEESCCSSHHHHHHHHHHHH--HTCEEE-EECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES--------SHH
T ss_pred CcEEEEeCCCCcchHHHHHHHHHH--cCCEEE-EECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc--------CHH
Confidence 478999887633334455554422 235653 34433211 23334444 444 677776542 134
Q ss_pred HHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 110 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 110 ~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
+.++++|+|..-.|..+ -.|+|-+ +.....+..|.+..++++..+..++-+|| ||.+||
T Consensus 230 eav~~aDvvytd~W~sm-~iq~er~-----------~~~~~~~~~y~vt~~~l~~a~~~ai~mH~--lPa~Rg 288 (328)
T 3grf_A 230 KGCEGVDVVYTDSWMSY-HITKEQK-----------EARLKVLTPFQVDDAVMAVTSKRSIFMNC--LPATRG 288 (328)
T ss_dssp HHHTTCSEEEECCCC---------C-----------CTHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCTT
T ss_pred HHhcCCCEEEecCcccc-CCcHHHH-----------HHHHHHhcCCCCCHHHHHhcCCCCEEECC--CCCCCC
Confidence 56779999987666320 0011110 11223445678999999998888999998 588887
No 32
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=92.07 E-value=0.54 Score=43.07 Aligned_cols=113 Identities=14% Similarity=0.195 Sum_probs=63.7
Q ss_pred CceEEEEEeCCc-hhHHHHHHHHHcCCC-CceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQE-HCLVDFLYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g-~~l~~ll~~~~~~~l-~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..||+++|-+.. .....++.++. .+ +.++. +++.+.-.++..+.+.|++.|..+..... +.+.++++
T Consensus 154 gl~va~vGD~~~~rva~Sl~~~~~--~~~g~~v~-~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~a 222 (310)
T 3csu_A 154 NLHVAMVGDLKYGRTVHSLTQALA--KFDGNRFY-FIAPDALAMPQYILDMLDEKGIAWSLHSS--------IEEVMAEV 222 (310)
T ss_dssp SCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE-EECCGGGCCCHHHHHHHHHTTCCEEECSC--------GGGTTTTC
T ss_pred CcEEEEECCCCCCchHHHHHHHHH--hCCCCEEE-EECCcccccCHHHHHHHHHcCCeEEEEcC--------HHHHhcCC
Confidence 478999887542 33556666553 33 46653 33332212344577888888988655321 22456689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
|+|..-.|.. + .++..........|.+..++++..+..++-+||.+
T Consensus 223 Dvvyt~~~q~------e---------r~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 268 (310)
T 3csu_A 223 DILYMTRVQK------E---------RLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLP 268 (310)
T ss_dssp SEEEECC--------------------------------CCBCGGGGTTCCTTCEEECCSC
T ss_pred CEEEECCccc------c---------ccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCC
Confidence 9998888743 1 01111111222357899999998888999999865
No 33
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=91.16 E-value=1.5 Score=40.02 Aligned_cols=113 Identities=13% Similarity=0.118 Sum_probs=68.7
Q ss_pred CceEEEEEeCCc-hhHHHHHHHHHcCCCCceEEEEeeCCCCC-CCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g-~~l~~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..||+++|-+.. .....++.++. .++.++. ++.++.- ++..+.+.|++.|..+..... +.+.++++
T Consensus 155 gl~va~vGD~~~~rva~Sl~~~~~--~~G~~v~--~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~a 222 (308)
T 1ml4_A 155 GLKIGLLGDLKYGRTVHSLAEALT--FYDVELY--LISPELLRMPRHIVEELREKGMKVVETTT--------LEDVIGKL 222 (308)
T ss_dssp SEEEEEESCTTTCHHHHHHHHHGG--GSCEEEE--EECCGGGCCCHHHHHHHHHTTCCEEEESC--------THHHHTTC
T ss_pred CeEEEEeCCCCcCchHHHHHHHHH--HCCCEEE--EECCccccCCHHHHHHHHHcCCeEEEEcC--------HHHHhcCC
Confidence 478999887642 34556666643 2346653 3333222 344577888999988765432 23456799
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
|+|..-.|.. |-++.. +.+. .....|-+..++++..+..++-+||.+
T Consensus 223 Dvvyt~~~q~------er~~~~---~~~~-----~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 223 DVLYVTRIQK------ERFPDE---QEYL-----KVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp SEEEECCCCG------GGSSSH---HHHH-----TTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred CEEEECCccc------cccCCH---HHHH-----HHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 9999888743 111000 0110 111346899999999888999999865
No 34
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=90.89 E-value=0.6 Score=43.16 Aligned_cols=118 Identities=12% Similarity=0.197 Sum_probs=65.7
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+.......++.++.. ++.++. +++.+.-.++..+. +.|++.|..+.... ++.+.++
T Consensus 155 gl~ia~vGD~~~~va~Sl~~~~~~--~G~~v~-~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~--------d~~eav~ 223 (333)
T 1duv_G 155 EMTLVYAGDARNNMGNSMLEAAAL--TGLDLR-LVAPQACWPEAALVTECRALAQQNGGNITLTE--------DVAKGVE 223 (333)
T ss_dssp GCEEEEESCTTSHHHHHHHHHHHH--HCCEEE-EECCGGGCCCHHHHHHHHHHHHHTTCEEEEES--------CHHHHHT
T ss_pred CcEEEEECCCccchHHHHHHHHHH--cCCEEE-EECCcccCCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHHhC
Confidence 378999877522223445544321 235653 34332211233343 44558897766542 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhc-CCCeEEecCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSF 180 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~-~~~~iNiHpslLP~y 180 (265)
++|+|..-.|.+. --|.+.+. ........|-+..++++.. +..++-+|| ||.+
T Consensus 224 ~aDvvytd~w~sm-g~~~~~~~-----------er~~~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (333)
T 1duv_G 224 GADFIYTDVWVSM-GEAKEKWA-----------ERIALLREYQVNSKMMQLTGNPEVKFLHC--LPAF 277 (333)
T ss_dssp TCSEEEECCSSCT-TSCTTHHH-----------HHHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCC
T ss_pred CCCEEEeCCcccc-CccccchH-----------HHHHHhhccccCHHHHHhccCCCcEEECC--CCCC
Confidence 9999998888441 00000010 0111223468999999988 778999998 5776
No 35
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=90.86 E-value=0.59 Score=43.33 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=65.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHH----HHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+ +.....++.++.. ++.++. +++.+.-.++..+.+ .|++.|..+..... +. .++
T Consensus 175 glkva~vGD~-~rva~Sl~~~~~~--~G~~v~-~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d--------~~-av~ 241 (339)
T 4a8t_A 175 DCKVVFVGDA-TQVCFSLGLITTK--MGMNFV-HFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD--------AS-SVE 241 (339)
T ss_dssp GCEEEEESSC-CHHHHHHHHHHHH--TTCEEE-EECCTTSSCCHHHHHHHHHHHHHHCCEEEEECC--------GG-GGT
T ss_pred CCEEEEECCC-chhHHHHHHHHHH--cCCEEE-EECCcccCCCHHHHHHHHHHHHHcCCEEEEECC--------hh-HHc
Confidence 4789988765 3234455555432 346653 344332122334444 34567877655431 23 566
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccc-cccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~-~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|.++- +++-+ +......|. +|.+..++++..+..++-+||. |.+||
T Consensus 242 ~aDvvytd~w~smg--~~~~~----------~~er~~~~~~~y~vt~ell~~ak~dai~mHcL--Pa~Rg 297 (339)
T 4a8t_A 242 GADFLYTDVWYGLY--EAELS----------EEERMKVFYPKYQVNQEMMDRAGANCKFMHCL--PATRG 297 (339)
T ss_dssp TCSEEEECCSSCCT--TSCCC----------HHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS--CCCBT
T ss_pred CCCEEEecCcccCC--chhhh----------hHHHHHHhccccccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 89999875554310 00000 001112233 3799999999988899999994 77776
No 36
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=90.82 E-value=0.37 Score=44.10 Aligned_cols=60 Identities=13% Similarity=0.282 Sum_probs=38.0
Q ss_pred HHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 108 LLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
+.+.++++|+|..-.|..+ + ...+.......+..|.+..++++..+..++-+|| ||.+||
T Consensus 210 ~~eav~~aDvvyt~~w~sm---------g----~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg 269 (309)
T 4f2g_A 210 PNEACKGADLVTTDVWTSM---------G----FEAENEARKRAFADWCVDEEMMSHANSDALFMHC--LPAHRG 269 (309)
T ss_dssp HHHHTTTCSEEEECCC-------------------------CCSGGGGCBCHHHHTTSCTTCEEEEC--SSCCBT
T ss_pred HHHHhcCCCEEEecccccC---------c----chhhHHHHHHHhcCceeCHHHHHhcCCCeEEECC--CCCCCC
Confidence 4456779999988666331 0 0011122234445689999999988889999999 478887
No 37
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=90.81 E-value=0.34 Score=43.57 Aligned_cols=71 Identities=10% Similarity=0.220 Sum_probs=43.6
Q ss_pred CCCCceEEEEEeCC-ch-hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 35 IDPKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
...|+||+|+|.|. |. .....+.. .+ +++|++|+... .....++|+++|+|-.+ .. +.++|
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~--~~--~~~lvav~d~~----~~~a~~~a~~~g~~~~y-~d--------~~ell 82 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQD--AE--NCVVTAIASRD----LTRAREMADRFSVPHAF-GS--------YEEML 82 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHH--CS--SEEEEEEECSS----HHHHHHHHHHHTCSEEE-SS--------HHHHH
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHh--CC--CeEEEEEECCC----HHHHHHHHHHcCCCeee-CC--------HHHHh
Confidence 45679999999886 32 22222222 12 47898877543 23468899999999543 21 23344
Q ss_pred h--CCCEEEEEe
Q 024606 113 Q--NTDFLVLAR 122 (265)
Q Consensus 113 ~--~~D~vv~ag 122 (265)
. ++|.|+++.
T Consensus 83 ~~~~iDaV~I~t 94 (350)
T 4had_A 83 ASDVIDAVYIPL 94 (350)
T ss_dssp HCSSCSEEEECS
T ss_pred cCCCCCEEEEeC
Confidence 4 689988875
No 38
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=90.81 E-value=0.75 Score=41.99 Aligned_cols=112 Identities=16% Similarity=0.178 Sum_probs=65.1
Q ss_pred CceEEEEEeCCc-hhHHHHHHHHHcCCC-CceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQE-HCLVDFLYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g-~~l~~ll~~~~~~~l-~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..||+++|-+.. .....++.++. .+ +.++. +++.+.-.++..+.+.|++.|..+..... +.+.++++
T Consensus 151 glkva~vGD~~~~rva~Sl~~~~~--~~~G~~v~-~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~a 219 (306)
T 4ekn_B 151 GIKIAFVGDLKYGRTVHSLVYALS--LFENVEMY-FVSPKELRLPKDIIEDLKAKNIKFYEKES--------LDDLDDDI 219 (306)
T ss_dssp TCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE-EECCGGGCCCHHHHHHHHHTTCCEEEESC--------GGGCCTTC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHH--hcCCCEEE-EECCcccccCHHHHHHHHHcCCEEEEEcC--------HHHHhcCC
Confidence 478999886542 23556666553 23 46653 34432212345677888889988765432 22345689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
|+|..-.|.+ |.+..... .......|.+..++++. ..++-+||.+
T Consensus 220 Dvvy~~~~q~------er~~~~~e--------~~~~~~~y~v~~~~l~~--~~ai~mH~lP 264 (306)
T 4ekn_B 220 DVLYVTRIQK------ERFPDPNE--------YEKVKGSYKIKREYVEG--KKFIIMHPLP 264 (306)
T ss_dssp SEEEECCCCG------GGCCSHHH--------HHHHHHHHCBCHHHHTT--CCCEEECCSC
T ss_pred CEEEeCCccc------ccCCCHHH--------HHHhccCcEECHHHHcC--CCCEEECCCC
Confidence 9998776632 22211000 00111236889999987 5689999976
No 39
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=90.76 E-value=0.6 Score=43.20 Aligned_cols=118 Identities=15% Similarity=0.229 Sum_probs=65.0
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+.......++.++.. ++.++. +++.+.-.++..+. +.|++.|..+.... ++.+.++
T Consensus 155 gl~va~vGD~~~~va~Sl~~~~~~--~G~~v~-~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~--------d~~eav~ 223 (335)
T 1dxh_A 155 DISYAYLGDARNNMGNSLLLIGAK--LGMDVR-IAAPKALWPHDEFVAQCKKFAEESGAKLTLTE--------DPKEAVK 223 (335)
T ss_dssp GCEEEEESCCSSHHHHHHHHHHHH--TTCEEE-EECCGGGSCCHHHHHHHHHHHHHHTCEEEEES--------CHHHHTT
T ss_pred CeEEEEecCCccchHHHHHHHHHH--cCCEEE-EECCcccCCCHHHHHHHHHHHHHcCCeEEEEe--------CHHHHhC
Confidence 378888876522224455554422 246653 33332111233343 34458887765532 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhc-CCCeEEecCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSF 180 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~-~~~~iNiHpslLP~y 180 (265)
++|+|..-.|.+. --|.+.+ .........|-+..++++.. +..++-+|| ||.+
T Consensus 224 ~aDvvytd~w~sm-g~~~e~~-----------~er~~~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (335)
T 1dxh_A 224 GVDFVHTDVWVSM-GEPVEAW-----------GERIKELLPYQVNMEIMKATGNPRAKFMHC--LPAF 277 (335)
T ss_dssp TCSEEEECCCSCS-SSCGGGC-----------HHHHHHHGGGCBCHHHHHTTCCSSCEEEEC--SCCC
T ss_pred CCCEEEeCCcccc-Cccchhh-----------HHHHHHhhcceeCHHHHHhccCCCeEEECC--CCCC
Confidence 9999988888431 0000000 01112223468999999988 778999998 5776
No 40
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=89.56 E-value=2.6 Score=39.28 Aligned_cols=121 Identities=11% Similarity=0.078 Sum_probs=65.2
Q ss_pred Cce--EEEEEeCC--chh-HHHHHHHHHcCCCCceEEEEeeCC-CCCCCcHHHH----HHHHcCCCEEEECCCCCchHHH
Q 024606 38 KYK--VAVLASKQ--EHC-LVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIR----FLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 38 ~~r--Iav~~Sg~--g~~-l~~ll~~~~~~~l~~~I~~Vit~~-~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
..| |+++|.-. |.+ ...++.++.. +++++. +++.+ .-.++..+.+ .|++.|..+.....
T Consensus 190 glkvvva~vGDl~~~~nrva~Sl~~~~~~--~G~~v~-~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d-------- 258 (359)
T 1zq6_A 190 GKKYVLTWTYHPKPLNTAVANSALTIATR--MGMDVT-LLCPTPDYILDERYMDWAAQNVAESGGSLQVSHD-------- 258 (359)
T ss_dssp TCEEEEEECCCSSCCCSHHHHHHHHHHHH--TTCEEE-EECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECC--------
T ss_pred CCeeEEEEEecccccccchHHHHHHHHHH--cCCEEE-EEcCccccCCCHHHHHHHHHHHHHcCCeEEEECC--------
Confidence 467 66666511 222 4445554422 245653 33322 1112323443 44577877665321
Q ss_pred HHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 108 LLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
+.+.++++|+|..-.|.. | .-.|. .-+.......+..|.+..++++..+ .++-+|| ||.+||
T Consensus 259 ~~eav~~aDvVyt~~w~s----e--~~mg~----~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg 320 (359)
T 1zq6_A 259 IDSAYAGADVVYAKSWGA----L--PFFGN----WEPEKPIRDQYQHFIVDERKMALTN-NGVFSHC--LPLRRN 320 (359)
T ss_dssp HHHHHTTCSEEEEECCCC----G--GGTTC----CTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECC--SCCCBT
T ss_pred HHHHhcCCCEEEECCccc----c--ccCCc----chhhHHHHHHhcCCCCCHHHHHhCC-CCEEECC--CCCCCC
Confidence 345677999999888754 0 00000 0000011223445789999999998 9999998 578887
No 41
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=89.37 E-value=0.78 Score=42.83 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=65.2
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHH----HHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+ +.....++.++.. ++.++. +++.+.-.++..+.+ .|++.|..+..... +. .++
T Consensus 153 glkva~vGD~-~rva~Sl~~~~~~--~G~~v~-~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--------~~-av~ 219 (355)
T 4a8p_A 153 DCKVVFVGDA-TQVCFSLGLITTK--MGMNFV-HFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD--------AS-SVE 219 (355)
T ss_dssp GCEEEEESCC-CHHHHHHHHHHHH--TTCEEE-EECCTTSSCCHHHHHHHHHHHHHHSCEEEEECC--------GG-GGT
T ss_pred CCEEEEECCC-chhHHHHHHHHHH--cCCEEE-EECCCccCCCHHHHHHHHHHHHHcCCeEEEECC--------HH-HHc
Confidence 4789988766 3234455554432 346653 344332122334444 44567877655431 23 566
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccc-cccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~-~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++|+|..-.|.++- +++-+ +......|. +|.+..++++..+..++-+||. |.+||
T Consensus 220 ~aDVVytd~w~smg--q~~~~----------~~er~~~~~~~y~vt~ell~~ak~dai~MHcL--Pa~Rg 275 (355)
T 4a8p_A 220 GADFLYTDVWYGLY--EAELS----------EEERMKVFYPKYQVNQEMMDRAGANCKFMHCL--PATRG 275 (355)
T ss_dssp TCSEEEECCSSEET--TEECC----------HHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS--CCCBT
T ss_pred CCCEEEecccccCc--chhhh----------hHHHHHHhccccccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 89999875553210 00000 001111233 3799999999988899999994 77776
No 42
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=89.08 E-value=1.7 Score=38.12 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=46.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC---------CCcHHHHHHHHcCCCEEEECCCCC--chHH
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG---------PNSHVIRFLERHGIPYHYLCAKEN--EREE 106 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~---------~~~~v~~~a~~~gIP~~~~~~~~~--~~~~ 106 (265)
.||++++.||+--...++..+.++| ++|+++++..+.. .-..+...|+..|||++.++-... ...+
T Consensus 4 ~MKvvvl~SGGkDSs~al~~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e 80 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNYALYWAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVE 80 (237)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHH
T ss_pred CCEEEEEecCcHHHHHHHHHHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHH
Confidence 3899999998742223333344455 6888876533211 124477889999999998774321 1134
Q ss_pred HHHHHhh--CCCEEE
Q 024606 107 ELLELVQ--NTDFLV 119 (265)
Q Consensus 107 ~l~~~l~--~~D~vv 119 (265)
++.+.++ +.+.++
T Consensus 81 ~l~~~l~~~~i~~vv 95 (237)
T 3rjz_A 81 DLKRVLSGLKIQGIV 95 (237)
T ss_dssp HHHHHHTTSCCSEEE
T ss_pred HHHHHHHhcCCcEEE
Confidence 5666666 456554
No 43
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=89.07 E-value=1.3 Score=40.28 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=37.8
Q ss_pred HHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 024606 109 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 183 (265)
Q Consensus 109 ~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~ 183 (265)
.+.++++|+|..-.|.+. + +..++.........|.+..++++..+..++-+|| ||.+||.
T Consensus 208 ~eav~~aDvvy~~~~~sm---------g----~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHp--lP~~Rg~ 267 (301)
T 2ef0_A 208 KEAALGAHALYTDVWTSM---------G----QEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHC--LPAHYGE 267 (301)
T ss_dssp HHHHTTCSEEEECCCC---------------------CHHHHHTTTCCBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred HHHhcCCCEEEecCcccC---------C----cccchhHHHHHhhccccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 345668999988787541 0 0011111112223568999999998889999997 6898873
No 44
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=89.07 E-value=0.9 Score=42.49 Aligned_cols=116 Identities=14% Similarity=0.226 Sum_probs=63.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHH----HHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..||+++|-+.......++.++.. +++++. +++.+.-.++..+. +.|++.|..+.... .+.+.++
T Consensus 176 gl~va~vGD~~~rva~Sl~~~~~~--lG~~v~-~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~--------d~~eav~ 244 (359)
T 2w37_A 176 GLTLTFMGDGRNNVANSLLVTGAI--LGVNIH-IVAPKALFPTEETQNIAKGFAEKSGAKLVITD--------DLDEGLK 244 (359)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHH--HTCEEE-EECCGGGSCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHHT
T ss_pred CeEEEEECCCccchHHHHHHHHHH--cCCEEE-EECCccccCCHHHHHHHHHHHHHcCCeEEEEe--------CHHHHhc
Confidence 478888876522223444444321 235653 33332111233343 34458887766542 1345677
Q ss_pred CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcC---CCeEEecCCCCCCC
Q 024606 114 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYG---KDVINIHHGLLPSF 180 (265)
Q Consensus 114 ~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~---~~~iNiHpslLP~y 180 (265)
++|+|..-.|.++ +.+.+ .........|-+..++++..+ ..++-+|| ||.+
T Consensus 245 ~aDvvytd~w~sm---g~ee~-----------~er~~~~~~y~v~~ell~~ak~~~~dai~MHc--LP~~ 298 (359)
T 2w37_A 245 GSNVVYTDVWVSM---GESNW-----------EERVKELTPYQVNMEAMKKTGTPDDQLIFMHC--LPAF 298 (359)
T ss_dssp TCSEEEECCSCCT---TCTTH-----------HHHHHHHGGGCBCHHHHHTTCCCGGGCEEEEC--SCCC
T ss_pred CCCEEEEcccccc---cccch-----------HHHHHHhhccccCHHHHHhhCCCCCCEEEECC--CCCC
Confidence 9999998888431 00001 001112234689999999887 78999998 4666
No 45
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=88.72 E-value=1 Score=42.16 Aligned_cols=119 Identities=14% Similarity=0.241 Sum_probs=65.4
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCC--CcHHH----HHHHHcCCCEEEECCCCCchHHHHHHH
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP--NSHVI----RFLERHGIPYHYLCAKENEREEELLEL 111 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~--~~~v~----~~a~~~gIP~~~~~~~~~~~~~~l~~~ 111 (265)
..||+++|-+.......++.++.. ++.++. +++.+.-.+ +..+. +.|++.|..+.... ++.+.
T Consensus 180 glkva~vGD~~nnva~Sl~~~~~~--lG~~v~-~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~--------d~~ea 248 (365)
T 4amu_A 180 NKKIVFIGDYKNNVGVSTMIGAAF--NGMHVV-MCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST--------DKILA 248 (365)
T ss_dssp TCEEEEESSTTSHHHHHHHHHHHH--TTCEEE-EESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES--------CHHHH
T ss_pred CCEEEEECCCCcchHHHHHHHHHH--cCCEEE-EECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC--------CHHHH
Confidence 478888876532224445554432 245653 333221112 22233 44566777665532 13456
Q ss_pred hhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCC
Q 024606 112 VQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFK 181 (265)
Q Consensus 112 l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yR 181 (265)
++++|+|..-.|..+-- |.+.|. ........|.+..++++..+..++-+|| ||.+|
T Consensus 249 v~~aDVVytd~W~smg~-~~~~~~-----------er~~~~~~y~vt~ell~~a~~dai~MHc--LP~~R 304 (365)
T 4amu_A 249 AQDADVIYTDVWVSLGE-PFELFD-----------KRIGELKNFQVDMNMIKAAKNDVIFLHC--LPAFH 304 (365)
T ss_dssp TTTCSEEEECCSCCTTC-CHHHHH-----------HHHHHHTTCCBCHHHHHHSCTTCEEEEC--SCCCC
T ss_pred hcCCCEEEecccccCCc-hhhhHH-----------HHHHHhcccccCHHHHHhcCCCcEEECC--CCCCC
Confidence 77999998866633100 000010 0111233468999999988888999998 58888
No 46
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=88.03 E-value=1.2 Score=39.98 Aligned_cols=74 Identities=20% Similarity=0.187 Sum_probs=42.8
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
|+||+|+|.|.-. ...+.++ .+ .+++++|+..........+.+.++++|++...+. .-+++++. .++|.
T Consensus 2 ~~rvgiiG~G~~~--~~~~~~l-~~--~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ll~~-~~vD~ 70 (337)
T 3ip3_A 2 SLKICVIGSSGHF--RYALEGL-DE--ECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYN-----NWWEMLEK-EKPDI 70 (337)
T ss_dssp CEEEEEECSSSCH--HHHHTTC-CT--TEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECS-----SHHHHHHH-HCCSE
T ss_pred ceEEEEEccchhH--HHHHHhc-CC--CcEEEEEecCCchhhHHHHHHHHHHcCCCCcccC-----CHHHHhcC-CCCCE
Confidence 5899999986522 2344444 22 5899988875431223345667777898543332 11333321 16888
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++.
T Consensus 71 V~I~t 75 (337)
T 3ip3_A 71 LVINT 75 (337)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 88774
No 47
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=86.91 E-value=9.6 Score=35.22 Aligned_cols=121 Identities=8% Similarity=0.038 Sum_probs=64.7
Q ss_pred CCceEEEEEeCCc----hh-HHHHHHHHHcCCCCceEEEEeeCC-CCCCCcHHHH----HHHHcCCCEEEECCCCCchHH
Q 024606 37 PKYKVAVLASKQE----HC-LVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIR----FLERHGIPYHYLCAKENEREE 106 (265)
Q Consensus 37 ~~~rIav~~Sg~g----~~-l~~ll~~~~~~~l~~~I~~Vit~~-~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~ 106 (265)
...|+++.+...| ++ ...++.++.. +++++.. ++.+ .-.++..+.+ .+++.|..+....
T Consensus 189 ~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~--~g~~v~~-~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~-------- 257 (359)
T 3kzn_A 189 RGKKYVLTWTYHPKPLNTAVANSALTIATR--MGMDVTL-LCPTPDYILDERYMDWAAQNVAESGGSLQVSH-------- 257 (359)
T ss_dssp TTCEEEEEECCCSSCCCSHHHHHHHHHHHH--TTCEEEE-ECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC--------
T ss_pred cCCeEEEEEeecCCccccchhhhhHHHHHh--ccccEEE-EecccccCCCHHHHHHHHHHHHhhCCCccccc--------
Confidence 3467777765432 22 3444444322 3466643 3332 1122333333 3556677765532
Q ss_pred HHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhccc-CcccccccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 107 ELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSK-GSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~-~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
++.+.++++|+|..-.|.. +-.. ...++. .....|..|.+.+++++..+ ..+-+||. |.+||
T Consensus 258 d~~eav~~aDvvyt~r~q~------~r~~-----~~~~~~~~~~~~~~~y~v~~~l~~~~~-~ai~MHpl--P~~Rg 320 (359)
T 3kzn_A 258 DIDSAYAGADVVYAKSWGA------LPFF-----GNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCL--PLRRN 320 (359)
T ss_dssp CHHHHHTTCSEEEEECCCC------GGGT-----TCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCS--CCCBT
T ss_pred CHHHHhcCCeEEEEEEEEE------eecc-----cchhhhHHHHHHHhccChHHHHhcCCC-CCEEECCC--CCCCC
Confidence 1345677999999988865 1000 011111 11233445678888887654 67789974 88888
No 48
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=86.75 E-value=3.7 Score=38.20 Aligned_cols=118 Identities=13% Similarity=0.204 Sum_probs=67.4
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc------CCCEEEECCCCCchHHHHHH
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH------GIPYHYLCAKENEREEELLE 110 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~------gIP~~~~~~~~~~~~~~l~~ 110 (265)
...||+++|-+. .....++.++.. +++++. +++.+.-..+..+.+.|++. |..+.... ++.+
T Consensus 187 ~glkva~vGD~~-nva~Sl~~~l~~--lG~~v~-~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~--------d~~e 254 (353)
T 3sds_A 187 EGLKIAWVGDAN-NVLFDLAIAATK--MGVNVA-VATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT--------VPEV 254 (353)
T ss_dssp TTCEEEEESCCC-HHHHHHHHHHHH--TTCEEE-EECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES--------CHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHH--cCCEEE-EECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC--------CHHH
Confidence 468999988654 234555555432 346653 34433211345666666653 55665432 1345
Q ss_pred HhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhh--cCCCeEEecCCCCCCCC
Q 024606 111 LVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS--YGKDVINIHHGLLPSFK 181 (265)
Q Consensus 111 ~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~--~~~~~iNiHpslLP~yR 181 (265)
.++++|+|..-.|.. .+.|. +....+..|..|.+..++++. .+..++-+||. |++|
T Consensus 255 av~~aDVvytd~w~s---mg~E~----------~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL--P~~~ 312 (353)
T 3sds_A 255 AVKDADVIVTDTWIS---MGQET----------EKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL--PRHP 312 (353)
T ss_dssp HTTTCSEEEECCC---------------------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS--CCCT
T ss_pred HhcCCCEEEeCCccC---Cchhh----------HHHHHHHHhhCceecHHHHhhcccCCCcEEECCC--CCCC
Confidence 677999998766532 11110 001112234567999999998 77889999996 6653
No 49
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=86.73 E-value=1.3 Score=39.77 Aligned_cols=72 Identities=4% Similarity=0.027 Sum_probs=42.3
Q ss_pred CCceEEEEEeCC-ch-hHHHH---HHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH
Q 024606 37 PKYKVAVLASKQ-EH-CLVDF---LYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 111 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~-~l~~l---l~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~ 111 (265)
+|.||+|+|.|. |. .+.++ ...+ .....++|++|+.... ....++|+++|+|-.+ .. +.++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~-~~~~~~~lvav~d~~~----~~a~~~a~~~g~~~~y-~d--------~~el 89 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVF-GDVERPRLVHLAEANA----GLAEARAGEFGFEKAT-AD--------WRAL 89 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHH-CSSCCCEEEEEECC------TTHHHHHHHHTCSEEE-SC--------HHHH
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhh-ccCCCcEEEEEECCCH----HHHHHHHHHhCCCeec-CC--------HHHH
Confidence 357999999886 22 12222 1111 1111478998876442 3467899999998554 21 2334
Q ss_pred hh--CCCEEEEEe
Q 024606 112 VQ--NTDFLVLAR 122 (265)
Q Consensus 112 l~--~~D~vv~ag 122 (265)
|. ++|.|+++.
T Consensus 90 l~~~~iDaV~Iat 102 (393)
T 4fb5_A 90 IADPEVDVVSVTT 102 (393)
T ss_dssp HHCTTCCEEEECS
T ss_pred hcCCCCcEEEECC
Confidence 44 689988875
No 50
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=86.18 E-value=1.4 Score=39.71 Aligned_cols=71 Identities=17% Similarity=0.255 Sum_probs=41.9
Q ss_pred CCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 35 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
..+++||+|+|.|. |.. .+.++.+....+++++|+... .....++++++|++++ .. +.+++.
T Consensus 10 ~~~~~rvgiiG~G~~g~~---~~~~l~~~~~~~~lvav~d~~----~~~~~~~~~~~~~~~~--~~--------~~~ll~ 72 (354)
T 3q2i_A 10 TDRKIRFALVGCGRIANN---HFGALEKHADRAELIDVCDID----PAALKAAVERTGARGH--AS--------LTDMLA 72 (354)
T ss_dssp CSSCEEEEEECCSTTHHH---HHHHHHHTTTTEEEEEEECSS----HHHHHHHHHHHCCEEE--SC--------HHHHHH
T ss_pred CCCcceEEEEcCcHHHHH---HHHHHHhCCCCeEEEEEEcCC----HHHHHHHHHHcCCcee--CC--------HHHHhc
Confidence 45679999999986 332 222222211247888776543 2345678888898543 21 223333
Q ss_pred --CCCEEEEEe
Q 024606 114 --NTDFLVLAR 122 (265)
Q Consensus 114 --~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 73 ~~~~D~V~i~t 83 (354)
T 3q2i_A 73 QTDADIVILTT 83 (354)
T ss_dssp HCCCSEEEECS
T ss_pred CCCCCEEEECC
Confidence 688888765
No 51
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=86.14 E-value=0.69 Score=41.43 Aligned_cols=70 Identities=19% Similarity=0.257 Sum_probs=42.0
Q ss_pred CceEEEEEeCCchhHHHHHHHHHc-CCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--C
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 114 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~-~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~ 114 (265)
++||+|+|.|.-. ...+.++.. +...+++++|+... .....++|+++|+|..+ . .+.+++. +
T Consensus 2 ~~rigiiG~G~ig--~~~~~~l~~~~~~~~~l~av~d~~----~~~a~~~a~~~~~~~~~-~--------~~~~ll~~~~ 66 (334)
T 3ohs_X 2 ALRWGIVSVGLIS--SDFTAVLQTLPRSEHQVVAVAARD----LSRAKEFAQKHDIPKAY-G--------SYEELAKDPN 66 (334)
T ss_dssp CEEEEEECCSHHH--HHHHHHHTTSCTTTEEEEEEECSS----HHHHHHHHHHHTCSCEE-S--------SHHHHHHCTT
T ss_pred ccEEEEECchHHH--HHHHHHHHhCCCCCeEEEEEEcCC----HHHHHHHHHHcCCCccc-C--------CHHHHhcCCC
Confidence 5899999987622 223334332 22236888876543 23467889999998443 1 1233444 6
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++.
T Consensus 67 vD~V~i~t 74 (334)
T 3ohs_X 67 VEVAYVGT 74 (334)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 88888765
No 52
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=85.11 E-value=0.98 Score=40.93 Aligned_cols=72 Identities=18% Similarity=0.131 Sum_probs=41.3
Q ss_pred CCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh-
Q 024606 35 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 113 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~- 113 (265)
.-+++||+|+|.|.-.. ..++.++... ..+++++|+... .....++|+++|++.+. + +.+++.
T Consensus 24 ~m~~~rigiIG~G~~g~-~~~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~g~~~~~-~---------~~~ll~~ 87 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAW-RRALPALEAE-PLTEVTAIASRR----WDRAKRFTERFGGEPVE-G---------YPALLER 87 (350)
T ss_dssp --CCEEEEEESCCHHHH-HTHHHHHHHC-TTEEEEEEEESS----HHHHHHHHHHHCSEEEE-S---------HHHHHTC
T ss_pred CCCceEEEEEcCcHHHH-HHHHHHHHhC-CCeEEEEEEcCC----HHHHHHHHHHcCCCCcC-C---------HHHHhcC
Confidence 33468999999876221 0122222221 147888877643 23467888999998752 1 223443
Q ss_pred -CCCEEEEEe
Q 024606 114 -NTDFLVLAR 122 (265)
Q Consensus 114 -~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 88 ~~~D~V~i~t 97 (350)
T 3rc1_A 88 DDVDAVYVPL 97 (350)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEECC
Confidence 578887764
No 53
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=84.24 E-value=3.5 Score=36.86 Aligned_cols=71 Identities=11% Similarity=0.109 Sum_probs=41.4
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--CC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~~ 115 (265)
++||+|+|.|.-. ...+.++.+....+++++|+... .....++++++||+...+.. +.+++. ++
T Consensus 2 ~~rigiIG~G~~g--~~~~~~l~~~~~~~~l~av~d~~----~~~~~~~~~~~g~~~~~~~~--------~~~ll~~~~~ 67 (344)
T 3mz0_A 2 SLRIGVIGTGAIG--KEHINRITNKLSGAEIVAVTDVN----QEAAQKVVEQYQLNATVYPN--------DDSLLADENV 67 (344)
T ss_dssp CEEEEEECCSHHH--HHHHHHHHHTCSSEEEEEEECSS----HHHHHHHHHHTTCCCEEESS--------HHHHHHCTTC
T ss_pred eEEEEEECccHHH--HHHHHHHHhhCCCcEEEEEEcCC----HHHHHHHHHHhCCCCeeeCC--------HHHHhcCCCC
Confidence 5799999987621 22333333111247888776533 23467788999975433321 223444 58
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++.
T Consensus 68 D~V~i~t 74 (344)
T 3mz0_A 68 DAVLVTS 74 (344)
T ss_dssp CEEEECS
T ss_pred CEEEECC
Confidence 8888765
No 54
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=83.19 E-value=1.3 Score=40.67 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=41.1
Q ss_pred CCceEEEEEeC-C-chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 37 PKYKVAVLASK-Q-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 37 ~~~rIav~~Sg-~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
+++||+|+|.| . +.. +..+. . .+ ..++++|+... .....++++++|++++ .. -+++++. .
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~-~--~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~--~~-----~~ell~~-~ 63 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMR-H--HP--DAQIVAACDPN----EDVRERFGKEYGIPVF--AT-----LAEMMQH-V 63 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHH-H--CT--TEEEEEEECSC----HHHHHHHHHHHTCCEE--SS-----HHHHHHH-S
T ss_pred CceEEEEEeCCHHHHHHHHHHHH-h--CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeE--CC-----HHHHHcC-C
Confidence 36899999988 4 222 33332 2 12 47888877643 2345678889999954 21 1233321 1
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 64 ~vD~V~i~t 72 (387)
T 3moi_A 64 QMDAVYIAS 72 (387)
T ss_dssp CCSEEEECS
T ss_pred CCCEEEEcC
Confidence 688888765
No 55
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=81.78 E-value=1.8 Score=39.86 Aligned_cols=74 Identities=12% Similarity=0.157 Sum_probs=43.6
Q ss_pred CCCceEEEEEeCC-ch-hHHHHHHHHH-cCCC--CceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHH
Q 024606 36 DPKYKVAVLASKQ-EH-CLVDFLYGWQ-EGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 110 (265)
Q Consensus 36 ~~~~rIav~~Sg~-g~-~l~~ll~~~~-~~~l--~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~ 110 (265)
..|+||+|+|.|. |. .+.++.+.-. ...+ +++|++|+... .....++|+++|+|-.+ . .+.+
T Consensus 24 s~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~----~~~a~~~a~~~~~~~~y-~--------d~~~ 90 (412)
T 4gqa_A 24 SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD----QAMAERHAAKLGAEKAY-G--------DWRE 90 (412)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS----HHHHHHHHHHHTCSEEE-S--------SHHH
T ss_pred cccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC----HHHHHHHHHHcCCCeEE-C--------CHHH
Confidence 4568999999886 32 2333332211 1111 36888877533 34567889999998543 2 1233
Q ss_pred Hhh--CCCEEEEEe
Q 024606 111 LVQ--NTDFLVLAR 122 (265)
Q Consensus 111 ~l~--~~D~vv~ag 122 (265)
+|. ++|+|+++.
T Consensus 91 ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 91 LVNDPQVDVVDITS 104 (412)
T ss_dssp HHHCTTCCEEEECS
T ss_pred HhcCCCCCEEEECC
Confidence 444 689888775
No 56
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=81.53 E-value=1.3 Score=39.49 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=36.7
Q ss_pred CCceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh-
Q 024606 37 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~- 113 (265)
+++||+|+|.|. |.. +.++.+. + .+++++|+..... ...++|+++|+|..+ .. +.+++.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~---~--~~~~~av~d~~~~----~~~~~a~~~~~~~~~-~~--------~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA---G--NGEVVAVSSRTLE----SAQAFANKYHLPKAY-DK--------LEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH---C--SEEEEEEECSCSS----TTCC---CCCCSCEE-SC--------HHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHhC---C--CcEEEEEEcCCHH----HHHHHHHHcCCCccc-CC--------HHHHhcC
Confidence 468999999986 332 2333221 3 4788888764422 235677888887332 11 223444
Q ss_pred -CCCEEEEEe
Q 024606 114 -NTDFLVLAR 122 (265)
Q Consensus 114 -~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 66 ~~~D~V~i~t 75 (329)
T 3evn_A 66 ESIDVIYVAT 75 (329)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEECC
Confidence 578777664
No 57
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=81.42 E-value=4 Score=37.06 Aligned_cols=69 Identities=10% Similarity=0.108 Sum_probs=41.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--CC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~~ 115 (265)
++||+|+|.|..+. ..++.++..+ .+++++|+... .....++|+++|++-.+ . .+.+++. ++
T Consensus 26 ~irvgiiG~G~~~~-~~~~~~~~~~--~~~lvav~d~~----~~~a~~~a~~~~~~~~~-~--------~~~~ll~~~~v 89 (361)
T 3u3x_A 26 ELRFAAVGLNHNHI-YGQVNCLLRA--GARLAGFHEKD----DALAAEFSAVYADARRI-A--------TAEEILEDENI 89 (361)
T ss_dssp CCEEEEECCCSTTH-HHHHHHHHHT--TCEEEEEECSC----HHHHHHHHHHSSSCCEE-S--------CHHHHHTCTTC
T ss_pred CcEEEEECcCHHHH-HHHHHHhhcC--CcEEEEEEcCC----HHHHHHHHHHcCCCccc-C--------CHHHHhcCCCC
Confidence 47999999987442 1223333323 47998887643 23467888999865433 1 1233444 57
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++.
T Consensus 90 D~V~I~t 96 (361)
T 3u3x_A 90 GLIVSAA 96 (361)
T ss_dssp CEEEECC
T ss_pred CEEEEeC
Confidence 8888765
No 58
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=81.34 E-value=2.6 Score=39.61 Aligned_cols=83 Identities=7% Similarity=0.098 Sum_probs=52.1
Q ss_pred ceEEEEEe-CC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCc----h-----HHH
Q 024606 39 YKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE----R-----EEE 107 (265)
Q Consensus 39 ~rIav~~S-g~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~----~-----~~~ 107 (265)
+||+|+|| |+ |++-.+++... . .++++++.+++ .-.-+.+.|++++..+..+...... + .+.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~--~~~vvaL~a~~---n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--K--GIRLIGISFHS---NLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--C--SEEEEEEEESS---CHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--C--CeEEEEEEccC---CHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHH
Confidence 78999996 65 55544455442 2 48999998865 2345788899999888765432111 1 234
Q ss_pred HHHHhh--CCCEEEEE--ecCCCCc
Q 024606 108 LLELVQ--NTDFLVLA--RYMQPVP 128 (265)
Q Consensus 108 l~~~l~--~~D~vv~a--g~~~~ip 128 (265)
+.+.+. ++|+|+.+ |+..+-|
T Consensus 77 l~el~~~~~~D~Vv~AivG~aGL~p 101 (376)
T 3a06_A 77 IEEMLEALKPDITMVAVSGFSGLRA 101 (376)
T ss_dssp HHHHHHHHCCSEEEECCCSTTHHHH
T ss_pred HHHHhcCCCCCEEEEEeeCHHHHHH
Confidence 555554 79998866 4444333
No 59
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=81.04 E-value=2 Score=38.34 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=41.1
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~-- 113 (265)
+++||+|+|.|. |.. ++.++.+- ..+++++|+... .....++++++|+|..+ . . +.+++.
T Consensus 4 ~~~~igiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~-~-----~---~~~ll~~~ 66 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPR---FVAGLRES-AQAEVRGIASRR----LENAQKMAKELAIPVAY-G-----S---YEELCKDE 66 (330)
T ss_dssp CCEEEEECSCCTTHHH---HHHHHHHS-SSEEEEEEBCSS----SHHHHHHHHHTTCCCCB-S-----S---HHHHHHCT
T ss_pred CeEEEEEECchHHHHH---HHHHHHhC-CCcEEEEEEeCC----HHHHHHHHHHcCCCcee-C-----C---HHHHhcCC
Confidence 468999999986 332 23333221 147888776543 34567888999997322 1 1 223344
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 67 ~~D~V~i~t 75 (330)
T 3e9m_A 67 TIDIIYIPT 75 (330)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcC
Confidence 678887765
No 60
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=80.80 E-value=3.1 Score=39.67 Aligned_cols=53 Identities=8% Similarity=0.079 Sum_probs=30.5
Q ss_pred CCceEEEEEeCC--chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC
Q 024606 37 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 93 (265)
Q Consensus 37 ~~~rIav~~Sg~--g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP 93 (265)
+++||+|+|.|. |.--...+.++..-...+++++|+... .....++|+++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~----~~~a~~~a~~~g~~ 92 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPT----LKSSLQTIEQLQLK 92 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSC----HHHHHHHHHHTTCT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 458999999842 221122233332210147888876533 23456788899997
No 61
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=80.68 E-value=2.1 Score=36.11 Aligned_cols=66 Identities=11% Similarity=0.142 Sum_probs=39.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
+|||+|+|.|. |+.+...+.. .| +++..+ .+++ ...+.+++++.|+.... . . . +.+.++|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g---~~V~~v-~~r~---~~~~~~l~~~~g~~~~~-~-----~-~---~~~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQ---IPAIIA-NSRG---PASLSSVTDRFGASVKA-V-----E-L---KDALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TT---CCEEEE-CTTC---GGGGHHHHHHHTTTEEE-C-----C-H---HHHTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CEEEEE-ECCC---HHHHHHHHHHhCCCccc-C-----h-H---HHHhcCC
Confidence 58999999876 4443322222 23 566543 4442 33456778888887643 1 1 1 2345899
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++-
T Consensus 84 vVilav 89 (220)
T 4huj_A 84 VVILAV 89 (220)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999885
No 62
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=80.09 E-value=3.3 Score=37.14 Aligned_cols=72 Identities=22% Similarity=0.199 Sum_probs=42.1
Q ss_pred CCCCceEEEEEeC-C-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 35 IDPKYKVAVLASK-Q-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 35 ~~~~~rIav~~Sg-~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
+.+++||+|+|.| . |.. .+.++..-...+++++|+... .....++|+++|++-.+ .. +.+++
T Consensus 15 ~~~~irvgiIG~G~~~g~~---~~~~l~~~~~~~~lvav~d~~----~~~~~~~a~~~~~~~~~-~~--------~~~ll 78 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAAREL---HLPALKNLSHLFEITAVTSRT----RSHAEEFAKMVGNPAVF-DS--------YEELL 78 (340)
T ss_dssp -CCCEEEEEECCSHHHHHT---HHHHHHTTTTTEEEEEEECSS----HHHHHHHHHHHSSCEEE-SC--------HHHHH
T ss_pred CCCceeEEEEecCHHHHHH---HHHHHHhCCCceEEEEEEcCC----HHHHHHHHHHhCCCccc-CC--------HHHHh
Confidence 6678999999988 3 322 222222211147888876543 23467788899985443 21 23344
Q ss_pred h--CCCEEEEEe
Q 024606 113 Q--NTDFLVLAR 122 (265)
Q Consensus 113 ~--~~D~vv~ag 122 (265)
. ++|+|+++.
T Consensus 79 ~~~~vD~V~i~t 90 (340)
T 1zh8_A 79 ESGLVDAVDLTL 90 (340)
T ss_dssp HSSCCSEEEECC
T ss_pred cCCCCCEEEEeC
Confidence 4 588888775
No 63
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=79.83 E-value=2.7 Score=37.33 Aligned_cols=66 Identities=8% Similarity=0.075 Sum_probs=39.8
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--C
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 114 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~ 114 (265)
++||+|+|.|. |.. ++..+.+. ..+++++|+... .....++++++|++ + .. +.+++. +
T Consensus 3 ~~~vgiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~-~--~~--------~~~~l~~~~ 63 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKV---HAKAVSGN-ADARLVAVADAF----PAAAEAIAGAYGCE-V--RT--------IDAIEAAAD 63 (331)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCE-E--CC--------HHHHHHCTT
T ss_pred ceEEEEECCCHHHHH---HHHHHhhC-CCcEEEEEECCC----HHHHHHHHHHhCCC-c--CC--------HHHHhcCCC
Confidence 58999999876 332 23333221 147888776533 23467788899998 2 21 223344 6
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++.
T Consensus 64 ~D~V~i~t 71 (331)
T 4hkt_A 64 IDAVVICT 71 (331)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 78888765
No 64
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=79.83 E-value=3.5 Score=37.87 Aligned_cols=72 Identities=11% Similarity=0.077 Sum_probs=42.8
Q ss_pred CCceEEEEEeCCc----hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC--EEEECCCCCchHHHHH
Q 024606 37 PKYKVAVLASKQE----HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 109 (265)
Q Consensus 37 ~~~rIav~~Sg~g----~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~~~~l~ 109 (265)
+++||+|+|.|.+ .. +.++ .. .+ .++++++|++++ .....++|+++|+| -.+ . .-++++
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~-~~--~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-~-----~~~~ll 76 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAA-LR--DN--TFVLVAGAFDID---PIRGSAFGEQLGVDSERCY-A-----DYLSMF 76 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHH-HG--GG--SEEEEEEECCSS---HHHHHHHHHHTTCCGGGBC-S-----SHHHHH
T ss_pred CcceEEEEcCCccchhHHHHHHHH-hh--CC--CeEEEEEEeCCC---HHHHHHHHHHhCCCcceee-C-----CHHHHH
Confidence 4689999999972 21 2222 11 12 378887566552 33567889999997 222 1 124454
Q ss_pred HHh----hCCCEEEEEe
Q 024606 110 ELV----QNTDFLVLAR 122 (265)
Q Consensus 110 ~~l----~~~D~vv~ag 122 (265)
+.- .++|+|+++.
T Consensus 77 ~~~~~~~~~vD~V~i~t 93 (398)
T 3dty_A 77 EQEARRADGIQAVSIAT 93 (398)
T ss_dssp HHHTTCTTCCSEEEEES
T ss_pred hcccccCCCCCEEEECC
Confidence 432 1489988875
No 65
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=79.76 E-value=2.6 Score=37.72 Aligned_cols=69 Identities=12% Similarity=0.124 Sum_probs=41.1
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--CC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~~ 115 (265)
++||+|+|.|.-. ..++.++.+- ..+++++|+... .....++++++|++..+ .. +.+++. ++
T Consensus 2 ~~rvgiIG~G~~g--~~~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~-~~--------~~~ll~~~~~ 65 (344)
T 3ezy_A 2 SLRIGVIGLGRIG--TIHAENLKMI-DDAILYAISDVR----EDRLREMKEKLGVEKAY-KD--------PHELIEDPNV 65 (344)
T ss_dssp CEEEEEECCSHHH--HHHHHHGGGS-TTEEEEEEECSC----HHHHHHHHHHHTCSEEE-SS--------HHHHHHCTTC
T ss_pred eeEEEEEcCCHHH--HHHHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHhCCCcee-CC--------HHHHhcCCCC
Confidence 5899999987521 2233443331 147888776533 23457788899998443 11 223444 67
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++.
T Consensus 66 D~V~i~t 72 (344)
T 3ezy_A 66 DAVLVCS 72 (344)
T ss_dssp CEEEECS
T ss_pred CEEEEcC
Confidence 8888765
No 66
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=79.34 E-value=4.6 Score=35.86 Aligned_cols=72 Identities=8% Similarity=0.123 Sum_probs=40.0
Q ss_pred CCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 35 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
+.+++||+|+|.|. |.. .+..+.+....+++++|+... .....++++++|++..+ .. +.+++.
T Consensus 5 ~~~~~~v~iiG~G~ig~~---~~~~l~~~~~~~~~vav~d~~----~~~~~~~a~~~g~~~~~-~~--------~~~~l~ 68 (346)
T 3cea_A 5 TRKPLRAAIIGLGRLGER---HARHLVNKIQGVKLVAACALD----SNQLEWAKNELGVETTY-TN--------YKDMID 68 (346)
T ss_dssp CCCCEEEEEECCSTTHHH---HHHHHHHTCSSEEEEEEECSC----HHHHHHHHHTTCCSEEE-SC--------HHHHHT
T ss_pred CCCcceEEEEcCCHHHHH---HHHHHHhcCCCcEEEEEecCC----HHHHHHHHHHhCCCccc-CC--------HHHHhc
Confidence 35679999999976 332 223332011147887766533 23455678888986432 21 223343
Q ss_pred --CCCEEEEEe
Q 024606 114 --NTDFLVLAR 122 (265)
Q Consensus 114 --~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 69 ~~~~D~V~i~t 79 (346)
T 3cea_A 69 TENIDAIFIVA 79 (346)
T ss_dssp TSCCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 577777664
No 67
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=79.15 E-value=8.8 Score=35.09 Aligned_cols=113 Identities=11% Similarity=0.149 Sum_probs=64.3
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC-CCcHHHH----HHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIR----FLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
..||+++|-+. .....++.++. .+++++. +++ ++.- ++..+.+ .|++.|..+.... ++.+.+
T Consensus 155 gl~va~vGD~~-~va~Sl~~~~~--~~G~~v~-~~~-P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--------d~~eav 221 (321)
T 1oth_A 155 GLTLSWIGDGN-NILHSIMMSAA--KFGMHLQ-AAT-PKGYEPDASVTKLAEQYAKENGTKLLLTN--------DPLEAA 221 (321)
T ss_dssp TCEEEEESCSS-HHHHHHHTTTG--GGTCEEE-EEC-CTTCCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHH
T ss_pred CcEEEEECCch-hhHHHHHHHHH--HcCCeEE-EEC-CccccCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHHh
Confidence 47899987654 23445555432 2346663 344 3322 2333444 4557787776543 134567
Q ss_pred hCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 113 QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 113 ~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
+++|+|..-.|.++ ..|.+.+.-. .....|-+..++++..+..++-+||.+
T Consensus 222 ~~aDvvy~d~w~s~-g~e~~~~~~~------------~~~~~y~v~~~~l~~a~~dai~mH~lP 272 (321)
T 1oth_A 222 HGGNVLITDTWISM-GREEEKKKRL------------QAFQGYQVTMKTAKVAASDWTFLHCLP 272 (321)
T ss_dssp TTCSEEEECCSSCT-TCGGGHHHHH------------HHTTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred ccCCEEEEeccccc-cchhhhHHHH------------HhccCceECHHHHhhcCCCCEEECCCC
Confidence 79999987566542 1111111111 112236889999999888999999965
No 68
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=79.12 E-value=3.6 Score=37.14 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=42.4
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh--h
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l--~ 113 (265)
+++||+++|+|. |..+ +..+.+.....++++|+... ++....++|+++|++... ..-+++++.. .
T Consensus 3 ~~irVaIIG~G~iG~~~---~~~l~~~~~~~elvav~d~~---~~~~~~~~a~~~g~~~~~------~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDL---MIKVLRNAKYLEMGAMVGID---AASDGLARAQRMGVTTTY------AGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHH---HHHHHHHCSSEEEEEEECSC---TTCHHHHHHHHTTCCEES------SHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHH---HHHHHhhCcCeEEEEEEeCC---hhhhHHHHHHHcCCCccc------CCHHHHHhccCCC
Confidence 358999999875 3332 23221101147888777644 233367889999988532 1123444331 2
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+.+-
T Consensus 71 ~iDvV~~at 79 (312)
T 1nvm_B 71 DIDFVFDAT 79 (312)
T ss_dssp GEEEEEECS
T ss_pred CCcEEEECC
Confidence 578888764
No 69
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=79.04 E-value=3.1 Score=36.54 Aligned_cols=68 Identities=12% Similarity=0.100 Sum_probs=39.9
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
++||+|+|.|. |.. .++..+... ..+++++|+... .....++++++|++. + . .-++++ .++|
T Consensus 6 ~~~igiIG~G~~g~~--~~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~~~~~-~-~-----~~~~ll---~~~D 68 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQK--AYLPILTKS-ERFEFVGAFTPN----KVKREKICSDYRIMP-F-D-----SIESLA---KKCD 68 (308)
T ss_dssp CCEEEEECCSHHHHH--HTHHHHTSC-SSSEEEEEECSC----HHHHHHHHHHHTCCB-C-S-----CHHHHH---TTCS
T ss_pred cCcEEEEecCHHHHH--HHHHHHHhC-CCeEEEEEECCC----HHHHHHHHHHcCCCC-c-C-----CHHHHH---hcCC
Confidence 58999999876 321 123333221 147888777643 234677888899986 2 2 112333 3778
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++.
T Consensus 69 ~V~i~t 74 (308)
T 3uuw_A 69 CIFLHS 74 (308)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 877764
No 70
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=79.01 E-value=4.7 Score=37.40 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=44.3
Q ss_pred HHHHHcCCCEEEECCCCCchHHHHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhh
Q 024606 85 RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS 164 (265)
Q Consensus 85 ~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~ 164 (265)
++|++.|..+.... .+.+.++++|+|..-.|...= -+++.+ +........|-+..++++.
T Consensus 229 ~~~~~~g~~v~~~~--------d~~eav~~aDvvyt~~w~s~~-~~~~~~-----------~~~~~~~~~y~v~~~~l~~ 288 (358)
T 4h31_A 229 AIAKQTGGKITLTE--------NVAEGVQGCDFLYTDVWVSMG-ESPEAW-----------DERVALMKPYQVNMNVLKQ 288 (358)
T ss_dssp HHHHHHTCEEEEES--------CHHHHHTTCSEEEECCSSCTT-SCTTHH-----------HHHHHHHGGGCBCHHHHHH
T ss_pred HHHHHcCCcceecc--------CHHHHhccCcEEEEEEEEEcc-cCchhH-----------HHHHHHHhCcccCHHHHHh
Confidence 44556676665432 134566789999876665410 011111 1111223456788999986
Q ss_pred c-CCCeEEecCCCCCCCCC
Q 024606 165 Y-GKDVINIHHGLLPSFKG 182 (265)
Q Consensus 165 ~-~~~~iNiHpslLP~yRG 182 (265)
. +..++-+|| ||+++.
T Consensus 289 ~ak~~~i~mH~--LP~~~n 305 (358)
T 4h31_A 289 TGNPNVKFMHC--LPAFHN 305 (358)
T ss_dssp TTCTTCEEEEC--SCCCCS
T ss_pred cCCCCcEEECC--CCCCCC
Confidence 4 557899999 688864
No 71
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=78.99 E-value=6 Score=35.59 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=39.8
Q ss_pred CCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC--EEEECCCCCchHHHHHHHhh
Q 024606 36 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~~~~l~~~l~ 113 (265)
.+++||+|+|.|.-. ..++.++... ..+++++|+... .....++++++|+| ...+. . +.+++.
T Consensus 4 ~~~~~vgiiG~G~ig--~~~~~~l~~~-~~~~lv~v~d~~----~~~~~~~a~~~~~~~~~~~~~-----~---~~~ll~ 68 (362)
T 1ydw_A 4 ETQIRIGVMGCADIA--RKVSRAIHLA-PNATISGVASRS----LEKAKAFATANNYPESTKIHG-----S---YESLLE 68 (362)
T ss_dssp --CEEEEEESCCTTH--HHHHHHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCCTTCEEES-----S---HHHHHH
T ss_pred CCceEEEEECchHHH--HHHHHHHhhC-CCcEEEEEEcCC----HHHHHHHHHHhCCCCCCeeeC-----C---HHHHhc
Confidence 356899999998632 1223333221 147888776643 23457788899974 22222 1 223343
Q ss_pred --CCCEEEEEe
Q 024606 114 --NTDFLVLAR 122 (265)
Q Consensus 114 --~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 69 ~~~~D~V~i~t 79 (362)
T 1ydw_A 69 DPEIDALYVPL 79 (362)
T ss_dssp CTTCCEEEECC
T ss_pred CCCCCEEEEcC
Confidence 578887765
No 72
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=78.97 E-value=4 Score=36.31 Aligned_cols=68 Identities=16% Similarity=0.296 Sum_probs=38.8
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcC-CCEEEECCCCCchHHHHHHHhh--C
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG-IPYHYLCAKENEREEELLELVQ--N 114 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~g-IP~~~~~~~~~~~~~~l~~~l~--~ 114 (265)
++||+|+|.|.... ..++.++... .+++++|+.... ....+++++++ ++++ . .+.+++. +
T Consensus 4 ~~rvgiiG~G~~~~-~~~~~~l~~~--~~~lvav~d~~~----~~~~~~a~~~~~~~~~--~--------~~~~ll~~~~ 66 (336)
T 2p2s_A 4 KIRFAAIGLAHNHI-YDMCQQLIDA--GAELAGVFESDS----DNRAKFTSLFPSVPFA--A--------SAEQLITDAS 66 (336)
T ss_dssp CCEEEEECCSSTHH-HHHHHHHHHT--TCEEEEEECSCT----TSCHHHHHHSTTCCBC--S--------CHHHHHTCTT
T ss_pred ccEEEEECCChHHH-HHhhhhhcCC--CcEEEEEeCCCH----HHHHHHHHhcCCCccc--C--------CHHHHhhCCC
Confidence 58999999986442 1233333333 478888776442 22467788884 3322 1 1223444 5
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++.
T Consensus 67 ~D~V~i~t 74 (336)
T 2p2s_A 67 IDLIACAV 74 (336)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 77777664
No 73
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=78.36 E-value=5 Score=31.02 Aligned_cols=73 Identities=15% Similarity=0.230 Sum_probs=41.6
Q ss_pred CCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh-
Q 024606 35 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV- 112 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l- 112 (265)
.+.+.+|+|+|.|. |..+...|.. .| ++++++=.++ ...+.+++.|+++...+. .+++.++..
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~--~g---~~v~vid~~~------~~~~~~~~~g~~~i~gd~----~~~~~l~~a~ 68 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA--SD---IPLVVIETSR------TRVDELRERGVRAVLGNA----ANEEIMQLAH 68 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEESCT----TSHHHHHHTT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHHcCCCEEECCC----CCHHHHHhcC
Confidence 34457899999876 5544444433 23 5665433322 235556678998865332 223444443
Q ss_pred -hCCCEEEEEe
Q 024606 113 -QNTDFLVLAR 122 (265)
Q Consensus 113 -~~~D~vv~ag 122 (265)
.++|++|++-
T Consensus 69 i~~ad~vi~~~ 79 (140)
T 3fwz_A 69 LECAKWLILTI 79 (140)
T ss_dssp GGGCSEEEECC
T ss_pred cccCCEEEEEC
Confidence 3799888653
No 74
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=78.09 E-value=6.9 Score=31.66 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=41.2
Q ss_pred cCCCCCCceEEEEEeCCchhH---HHHH-HHHHcCCC-CceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 32 VPDIDPKYKVAVLASKQEHCL---VDFL-YGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 32 ~~~~~~~~rIav~~Sg~g~~l---~~ll-~~~~~~~l-~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
++...|++-++=+|...|... .+.+ +++.+..+ ...|.++.|-..+..+..+.++|+++|+|+..++
T Consensus 4 ~~~~~p~~lvvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 4 MPLPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp CCCCCCCCEEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred cccccCCeEEEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeC
Confidence 344556665555666666433 3222 33433333 3567677775544446679999999999999875
No 75
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=77.82 E-value=2.3 Score=38.25 Aligned_cols=69 Identities=9% Similarity=0.113 Sum_probs=41.2
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--C
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 114 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~ 114 (265)
+++||+|+|.|.-. ...+.++.+- ..+++++|+... .....++++++|++.+ . . +.+++. +
T Consensus 4 ~~~~vgiiG~G~~g--~~~~~~l~~~-~~~~lvav~d~~----~~~~~~~~~~~g~~~~--~-----~---~~~~l~~~~ 66 (354)
T 3db2_A 4 NPVGVAAIGLGRWA--YVMADAYTKS-EKLKLVTCYSRT----EDKREKFGKRYNCAGD--A-----T---MEALLARED 66 (354)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHTTC-SSEEEEEEECSS----HHHHHHHHHHHTCCCC--S-----S---HHHHHHCSS
T ss_pred CcceEEEEccCHHH--HHHHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHcCCCCc--C-----C---HHHHhcCCC
Confidence 35899999987621 2344444322 147888776533 2346678888898862 1 1 223443 5
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++.
T Consensus 67 ~D~V~i~t 74 (354)
T 3db2_A 67 VEMVIITV 74 (354)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 78887765
No 76
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=77.74 E-value=2.8 Score=39.27 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=30.4
Q ss_pred CCceEEEEEe----CC-chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC
Q 024606 37 PKYKVAVLAS----KQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 93 (265)
Q Consensus 37 ~~~rIav~~S----g~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP 93 (265)
+++||+|+|. |. |.. +..+. ... + .+++++|+... .....++++++|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~-~~~-~--~~~lvav~d~~----~~~~~~~a~~~g~~ 73 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAIL-QLS-S--QFQITALYSPK----IETSIATIQRLKLS 73 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHH-HTT-T--TEEEEEEECSS----HHHHHHHHHHTTCT
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHH-hcC-C--CeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 4689999998 44 333 33332 210 1 47888876533 23456788899997
No 77
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=77.46 E-value=7.6 Score=35.16 Aligned_cols=111 Identities=17% Similarity=0.161 Sum_probs=63.2
Q ss_pred CceEEEEEeCCc-hhHHHHHHHHHcCCC-CceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQE-HCLVDFLYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g-~~l~~ll~~~~~~~l-~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..||+++|-+.. .....++.++. .+ +.++. +++ ++.-.... .++++.|..+..... +.+.++++
T Consensus 149 gl~va~vGD~~~~rva~Sl~~~~~--~~~g~~v~-~~~-P~~~~~~~--~~~~~~g~~~~~~~d--------~~eav~~a 214 (299)
T 1pg5_A 149 GLVFALLGDLKYARTVNSLLRILT--RFRPKLVY-LIS-PQLLRARK--EILDELNYPVKEVEN--------PFEVINEV 214 (299)
T ss_dssp TCEEEEEECCSSCHHHHHHHHHGG--GSCCSEEE-EEC-CGGGCCCH--HHHTTCCSCEEEESC--------GGGTGGGC
T ss_pred CcEEEEECCCCCCchHHHHHHHHH--hCCCCEEE-EEC-CchhcCCH--HHHHHcCCeEEEeCC--------HHHHhcCC
Confidence 478999887642 33556666542 34 46653 333 32211111 225677877655432 22456689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
|+|..-.|.. |-+... +.+ ......|.+..++++..+..++-+||.+
T Consensus 215 Dvvyt~~~q~------er~~~~---~~~-----~~~~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 215 DVLYVTRIQK------ERFVDE---MEY-----EKIKGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp SEEEEECCCS------TTSSCH---HHH-----HHHGGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred CEEEeCCccc------ccccCH---HHH-----HHhhcCcccCHHHHHhcCCCCEEECCCC
Confidence 9999988854 101000 000 0111246899999999888999999976
No 78
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=77.40 E-value=3.7 Score=38.14 Aligned_cols=76 Identities=5% Similarity=0.011 Sum_probs=41.2
Q ss_pred CCceEEEEEeCCchhH-HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC--EEEECCCCCchHHHHHHHh-
Q 024606 37 PKYKVAVLASKQEHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELLELV- 112 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l-~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~~~~l~~~l- 112 (265)
+++||+|+|.|.++-. ...+.++.... .+++++.|++++ .....++|+++|+| -.+ . .-+++++.-
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-~-----~~~~ll~~~~ 105 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDD-HYELVAGALSST---PEKAEASGRELGLDPSRVY-S-----DFKEMAIREA 105 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTS-CEEEEEEECCSS---HHHHHHHHHHHTCCGGGBC-S-----CHHHHHHHHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCC-CcEEEEEEeCCC---HHHHHHHHHHcCCCccccc-C-----CHHHHHhccc
Confidence 4689999999873211 11122222211 368887555552 33467888999997 222 1 123444431
Q ss_pred ---hCCCEEEEEe
Q 024606 113 ---QNTDFLVLAR 122 (265)
Q Consensus 113 ---~~~D~vv~ag 122 (265)
.++|+|+++.
T Consensus 106 ~~~~~vD~V~I~t 118 (417)
T 3v5n_A 106 KLKNGIEAVAIVT 118 (417)
T ss_dssp HCTTCCSEEEECS
T ss_pred ccCCCCcEEEECC
Confidence 1488888775
No 79
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=75.79 E-value=4.9 Score=35.85 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=39.7
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~-- 113 (265)
+++||+|+|.|. |.. ++.++.+. ..+++++|+... .....++++++|++++ . .+.+++.
T Consensus 3 ~~~rvgiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~g~~~~--~--------~~~~~l~~~ 64 (344)
T 3euw_A 3 LTLRIALFGAGRIGHV---HAANIAAN-PDLELVVIADPF----IEGAQRLAEANGAEAV--A--------SPDEVFARD 64 (344)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECSS----HHHHHHHHHTTTCEEE--S--------SHHHHTTCS
T ss_pred CceEEEEECCcHHHHH---HHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHcCCcee--C--------CHHHHhcCC
Confidence 368999999876 332 23333221 147888776533 2345677888885543 2 1233454
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 65 ~~D~V~i~t 73 (344)
T 3euw_A 65 DIDGIVIGS 73 (344)
T ss_dssp CCCEEEECS
T ss_pred CCCEEEEeC
Confidence 678887765
No 80
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=75.63 E-value=2.5 Score=38.31 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=20.4
Q ss_pred cccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 154 NMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 154 ~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
.|-+..+.++..+ +-+|| ||.+||
T Consensus 233 ~y~v~~~~l~~a~---i~mH~--lP~~Rg 256 (291)
T 3d6n_B 233 QFGLTKERFEKVK---LYMHP--GPVNRN 256 (291)
T ss_dssp HHSBCHHHHTTCC---CEECS--SCCCBT
T ss_pred hcCcCHHHHHhcc---cccCC--CCCCCC
Confidence 4688999998776 88999 799987
No 81
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=75.50 E-value=6.2 Score=37.09 Aligned_cols=55 Identities=13% Similarity=0.136 Sum_probs=37.0
Q ss_pred CceEEEEEe-CC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 38 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 38 ~~rIav~~S-g~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
|+||+++|+ |+ |+...+++... ++ ..+++++.+++ .-..+.+.|+++++.+..+.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~--p~-~~~v~al~ag~---ni~~l~~~~~~f~~~~v~v~ 60 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERN--LD-RYQVIALTANR---NVKDLADAAKRTNAKRAVIA 60 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT--GG-GEEEEEEEESS---CHHHHHHHHHHTTCSEEEES
T ss_pred ceEEEEECCCeEeHHHHHHHHHhC--cC-cEEEEEEEcCC---CHHHHHHHHHHcCCcEEEEc
Confidence 589999999 66 65555555542 11 26788776765 22346788899999887654
No 82
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=73.84 E-value=7.1 Score=31.69 Aligned_cols=83 Identities=16% Similarity=0.098 Sum_probs=47.1
Q ss_pred CCCceEEEEEeCCc--hh-HHHHHHHHHc--CC-CCceEE--EEeeCC-CCCCCcHHHHHHHHcCCCEEEECCCCCchHH
Q 024606 36 DPKYKVAVLASKQE--HC-LVDFLYGWQE--GK-LPVEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREE 106 (265)
Q Consensus 36 ~~~~rIav~~Sg~g--~~-l~~ll~~~~~--~~-l~~~I~--~Vit~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~ 106 (265)
++++||.|+.+|+- |. .++++..+.. |- -..+|. ++-..+ ..+.+....+.++++||++. ...+ ...++
T Consensus 2 ~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar-~l~~~ 79 (161)
T 2cwd_A 2 DRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVAR-RLTRE 79 (161)
T ss_dssp CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCC-BCCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-cccc-CCCHh
Confidence 35689999999984 33 4556665432 21 023332 222211 23356678899999999975 3222 12221
Q ss_pred HHHHHhhCCCEEEEEecC
Q 024606 107 ELLELVQNTDFLVLARYM 124 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag~~ 124 (265)
.+.++|+|+...-.
T Consensus 80 ----~~~~~DlIi~M~~~ 93 (161)
T 2cwd_A 80 ----DVLAYDHILVMDRE 93 (161)
T ss_dssp ----HHHHCSEEEESSHH
T ss_pred ----HhccCCEEEECChH
Confidence 22378999987643
No 83
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=72.89 E-value=5 Score=35.77 Aligned_cols=72 Identities=6% Similarity=0.064 Sum_probs=41.8
Q ss_pred CceEEEEEeCC-ch-hHHHHHHH--HHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQ-EH-CLVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~-g~-~l~~ll~~--~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
+.||+|+|.|. |. .+.++... ...-...++|++|+... .....++|+++|+|..+ . .+.++|.
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~----~~~a~~~a~~~g~~~~~-~--------d~~~ll~ 72 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRD----AEAVRAAAGKLGWSTTE-T--------DWRTLLE 72 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSS----HHHHHHHHHHHTCSEEE-S--------CHHHHTT
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCC----HHHHHHHHHHcCCCccc-C--------CHHHHhc
Confidence 46899999875 32 23333221 11111135788776533 34567889999999654 2 1334554
Q ss_pred --CCCEEEEEe
Q 024606 114 --NTDFLVLAR 122 (265)
Q Consensus 114 --~~D~vv~ag 122 (265)
++|.|+++.
T Consensus 73 ~~~iDaV~I~t 83 (390)
T 4h3v_A 73 RDDVQLVDVCT 83 (390)
T ss_dssp CTTCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 688888775
No 84
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=72.89 E-value=4.5 Score=36.68 Aligned_cols=73 Identities=10% Similarity=0.113 Sum_probs=35.8
Q ss_pred CCCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 34 DIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 34 ~~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
..+++|||+|+|+|. |+.. .+.+.+ ..+|.. +. .+ ..-.+.+++ .++...++. .+.+++.+.+
T Consensus 12 ~~g~~mkilvlGaG~vG~~~---~~~L~~---~~~v~~-~~-~~----~~~~~~~~~-~~~~~~~d~---~d~~~l~~~~ 75 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAI---AWDLKD---EFDVYI-GD-VN----NENLEKVKE-FATPLKVDA---SNFDKLVEVM 75 (365)
T ss_dssp ----CCEEEEECCSHHHHHH---HHHHTT---TSEEEE-EE-SC----HHHHHHHTT-TSEEEECCT---TCHHHHHHHH
T ss_pred ccCCccEEEEECCCHHHHHH---HHHHhc---CCCeEE-EE-cC----HHHHHHHhc-cCCcEEEec---CCHHHHHHHH
Confidence 367789999999854 3322 233322 245542 22 21 111222222 344333332 2346677778
Q ss_pred hCCCEEEEEe
Q 024606 113 QNTDFLVLAR 122 (265)
Q Consensus 113 ~~~D~vv~ag 122 (265)
+++|+||.+-
T Consensus 76 ~~~DvVi~~~ 85 (365)
T 3abi_A 76 KEFELVIGAL 85 (365)
T ss_dssp TTCSEEEECC
T ss_pred hCCCEEEEec
Confidence 8999998763
No 85
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=72.83 E-value=7.5 Score=34.57 Aligned_cols=35 Identities=9% Similarity=-0.038 Sum_probs=20.4
Q ss_pred CCCceEEEEEeC-C-chhHHHHHHHHHcCCCCceEEEEeeCC
Q 024606 36 DPKYKVAVLASK-Q-EHCLVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 36 ~~~~rIav~~Sg-~-g~~l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
++|+||+|+|.| . +. ..+.++... +.++++|+...
T Consensus 1 g~mirvgiIG~gG~i~~---~h~~~l~~~--~~~lvav~d~~ 37 (312)
T 3o9z_A 1 GHMTRFALTGLAGYIAP---RHLKAIKEV--GGVLVASLDPA 37 (312)
T ss_dssp --CCEEEEECTTSSSHH---HHHHHHHHT--TCEEEEEECSS
T ss_pred CCceEEEEECCChHHHH---HHHHHHHhC--CCEEEEEEcCC
Confidence 468999999984 3 32 223333322 47898877644
No 86
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=72.61 E-value=4.4 Score=34.00 Aligned_cols=83 Identities=14% Similarity=0.192 Sum_probs=45.4
Q ss_pred CCCCceEEEEEeCCc--hh-HHHHHHHHHc--CCCCceEE--EEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHH
Q 024606 35 IDPKYKVAVLASKQE--HC-LVDFLYGWQE--GKLPVEIT--CVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g--~~-l~~ll~~~~~--~~l~~~I~--~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
..+++||.|+.+|+- |. .++++..+.. | +..+|. ++-..+..+.+....+.++++||++. ...+ ... ++
T Consensus 31 ~~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g-~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hrar-~lt-~~ 106 (184)
T 4etn_A 31 GRGSMDIIFVCTGNTSRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HVSS-PLT-EE 106 (184)
T ss_dssp ---CEEEEEEESSSSSHHHHHHHHHHHHHHHHT-CCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CBCC-BCC-HH
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHHHHHhcC-CcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hccC-cCC-HH
Confidence 345689999999884 33 4456655332 2 223442 22222223345668899999999976 2221 111 22
Q ss_pred HHHHhhCCCEEEEEecC
Q 024606 108 LLELVQNTDFLVLARYM 124 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~ 124 (265)
.+..+|+|+...-.
T Consensus 107 ---d~~~~DlIltMd~~ 120 (184)
T 4etn_A 107 ---LMESADLVLAMTHQ 120 (184)
T ss_dssp ---HHHHCSEEEESSHH
T ss_pred ---HcCCCCEEEEcCcH
Confidence 22368999987643
No 87
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=72.44 E-value=2 Score=38.96 Aligned_cols=68 Identities=10% Similarity=0.062 Sum_probs=38.3
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--C
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 114 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~ 114 (265)
+++||+|+|.|.-. ...+..+..- ..+++++|+.... .-.+.|+++|++++ . . +.+++. +
T Consensus 4 ~~~~vgiiG~G~~g--~~~~~~l~~~-~~~~l~av~d~~~-----~~~~~a~~~g~~~~--~-----~---~~~ll~~~~ 65 (359)
T 3e18_A 4 KKYQLVIVGYGGMG--SYHVTLASAA-DNLEVHGVFDILA-----EKREAAAQKGLKIY--E-----S---YEAVLADEK 65 (359)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHHTS-TTEEEEEEECSSH-----HHHHHHHTTTCCBC--S-----C---HHHHHHCTT
T ss_pred CcCcEEEECcCHHH--HHHHHHHHhC-CCcEEEEEEcCCH-----HHHHHHHhcCCcee--C-----C---HHHHhcCCC
Confidence 35899999987622 1222333221 1478888775431 22456778888753 1 1 223443 6
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++.
T Consensus 66 ~D~V~i~t 73 (359)
T 3e18_A 66 VDAVLIAT 73 (359)
T ss_dssp CCEEEECS
T ss_pred CCEEEEcC
Confidence 78888765
No 88
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=71.10 E-value=23 Score=31.80 Aligned_cols=73 Identities=12% Similarity=0.129 Sum_probs=41.8
Q ss_pred CCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--
Q 024606 36 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 113 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~-- 113 (265)
-+++||+|+|.|.-. ...+.++......+++++|+... .....++++++|++...+.. +.+++.
T Consensus 21 m~~~rvgiIG~G~~g--~~~~~~l~~~~~~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~~--------~~~ll~~~ 86 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIG--SDHLRRLANTVSGVEVVAVCDIV----AGRAQAALDKYAIEAKDYND--------YHDLINDK 86 (357)
T ss_dssp -CCEEEEEECCSHHH--HHHHHHHHHTCTTEEEEEEECSS----TTHHHHHHHHHTCCCEEESS--------HHHHHHCT
T ss_pred CCeeeEEEECCcHHH--HHHHHHHHhhCCCcEEEEEEeCC----HHHHHHHHHHhCCCCeeeCC--------HHHHhcCC
Confidence 346799999987621 22333333111147888877643 23567888999974333321 223444
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++.
T Consensus 87 ~~D~V~i~t 95 (357)
T 3ec7_A 87 DVEVVIITA 95 (357)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEcC
Confidence 588888765
No 89
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=70.39 E-value=13 Score=34.86 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=41.0
Q ss_pred CceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCCC-----cHHHHHHHHcCCCEEEEC
Q 024606 38 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~-----~~v~~~a~~~gIP~~~~~ 98 (265)
..||+|..||+. ++|..++..+.....+.++.+|..++.-..+ ..+.++|+++|||++...
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 468999999863 3555555544322135688888887643222 347899999999998765
No 90
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=69.26 E-value=18 Score=33.17 Aligned_cols=82 Identities=9% Similarity=0.084 Sum_probs=51.2
Q ss_pred HHHHHHHcCCCEEEECCCCC-chH---------HHHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhh--cccCccc
Q 024606 83 VIRFLERHGIPYHYLCAKEN-ERE---------EELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESL--SSKGSLT 150 (265)
Q Consensus 83 v~~~a~~~gIP~~~~~~~~~-~~~---------~~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~--~~~~~~s 150 (265)
....+...|+.+..+..+.- ..+ .++.+.++++|+|..-.|.+. + +.. ++. -.
T Consensus 188 l~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~---------g----~~~~~~~~--~r 252 (324)
T 1js1_X 188 FAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAY---------T----GDNYGQIL--ST 252 (324)
T ss_dssp HHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCC---------S----TTCTTCCC--CC
T ss_pred HHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccC---------C----CccccchH--HH
Confidence 45566667777665543321 111 123456668999988888541 0 001 111 12
Q ss_pred ccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 024606 151 SYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 183 (265)
Q Consensus 151 ~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~ 183 (265)
+..|.+..+.++..+ .++-+|| ||.+||.
T Consensus 253 -~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg~ 281 (324)
T 1js1_X 253 -DRNWTVGDRQMAVTN-NAYFMHC--LPVRRNM 281 (324)
T ss_dssp -CTTSSBCHHHHTTSS-SCEEECC--SCCCBTT
T ss_pred -hcCcccCHHHHHhcC-CcEEECC--CCCCCCc
Confidence 467899999999988 9999996 6888873
No 91
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=68.90 E-value=16 Score=32.12 Aligned_cols=50 Identities=14% Similarity=0.135 Sum_probs=29.5
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 93 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP 93 (265)
+++||+|+|.|. |.. .++.++... ..+++++|+.... ....++++++|++
T Consensus 4 ~~~~vgiiG~G~~g~~--~~~~~l~~~-~~~~lvav~d~~~----~~~~~~~~~~g~~ 54 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQK--AWLPVLAAA-SDWTLQGAWSPTR----AKALPICESWRIP 54 (319)
T ss_dssp -CEEEEEECCSTHHHH--THHHHHHSC-SSEEEEEEECSSC----TTHHHHHHHHTCC
T ss_pred CcceEEEECCCHHHHH--HHHHHHHhC-CCeEEEEEECCCH----HHHHHHHHHcCCC
Confidence 358999999876 321 122333221 1478877765432 2356778888988
No 92
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=67.77 E-value=21 Score=31.81 Aligned_cols=57 Identities=2% Similarity=-0.102 Sum_probs=34.6
Q ss_pred CCCCCCceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 33 PDIDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 33 ~~~~~~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
.....||||+++..+. |+ .+..|.+++.+- .++|. ++|.. ...+..++.|+++..++
T Consensus 15 ~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~-v~~~~------~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 15 IEGRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVS-YVTAG------GFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp ----CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEE-EEECG------GGHHHHHHTTCEEEECC
T ss_pred cCcccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEE-EEeCH------HHHHHHHhcCCEEEecc
Confidence 3456689999988765 43 245566665442 37876 44432 23566778899988776
No 93
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=67.61 E-value=11 Score=33.11 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=38.2
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh-hCCC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV-QNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l-~~~D 116 (265)
|+||+|+|.|.-. ..++..+.... .+++++|+... .....++++++|++..+ . .-++ ++ .++|
T Consensus 1 ~~~vgiiG~G~~g--~~~~~~l~~~~-~~~~~~v~d~~----~~~~~~~~~~~~~~~~~-~-----~~~~---~l~~~~D 64 (325)
T 2ho3_A 1 MLKLGVIGTGAIS--HHFIEAAHTSG-EYQLVAIYSRK----LETAATFASRYQNIQLF-D-----QLEV---FFKSSFD 64 (325)
T ss_dssp CEEEEEECCSHHH--HHHHHHHHHTT-SEEEEEEECSS----HHHHHHHGGGSSSCEEE-S-----CHHH---HHTSSCS
T ss_pred CeEEEEEeCCHHH--HHHHHHHHhCC-CeEEEEEEeCC----HHHHHHHHHHcCCCeEe-C-----CHHH---HhCCCCC
Confidence 5799999987621 22333332211 47888776533 22355677888875432 1 1122 33 3678
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++.
T Consensus 65 ~V~i~t 70 (325)
T 2ho3_A 65 LVYIAS 70 (325)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 887765
No 94
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=66.07 E-value=5.7 Score=30.51 Aligned_cols=64 Identities=19% Similarity=0.023 Sum_probs=36.3
Q ss_pred CCCCceEEEEEeCCch-h-H-HHHHHHHHcCCCCceEEEEee-CCCCC---CC------------cHHHHHHHHcCCCEE
Q 024606 35 IDPKYKVAVLASKQEH-C-L-VDFLYGWQEGKLPVEITCVIS-NHDRG---PN------------SHVIRFLERHGIPYH 95 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g~-~-l-~~ll~~~~~~~l~~~I~~Vit-~~~~~---~~------------~~v~~~a~~~gIP~~ 95 (265)
..+++||.++++++.| . | ..+-++.++..++.+|.++-. .-++. .+ ..+.+.|.++|||+.
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~ 82 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIV 82 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEE
Confidence 4577999998887654 2 2 344444444446677766321 11111 01 235667778899998
Q ss_pred EEC
Q 024606 96 YLC 98 (265)
Q Consensus 96 ~~~ 98 (265)
.++
T Consensus 83 vI~ 85 (108)
T 3nbm_A 83 ATR 85 (108)
T ss_dssp ECC
T ss_pred EeC
Confidence 876
No 95
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=65.83 E-value=11 Score=33.47 Aligned_cols=35 Identities=3% Similarity=-0.011 Sum_probs=20.4
Q ss_pred CCCceEEEEEeC-C-chhHHHHHHHHHcCCCCceEEEEeeCC
Q 024606 36 DPKYKVAVLASK-Q-EHCLVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 36 ~~~~rIav~~Sg-~-g~~l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
++|+||+|+|.| . +. ..+.++.+. +.++++|+...
T Consensus 1 g~mirvgiIG~gG~i~~---~h~~~l~~~--~~~lvav~d~~ 37 (318)
T 3oa2_A 1 GHMKNFALIGAAGYIAP---RHMRAIKDT--GNCLVSAYDIN 37 (318)
T ss_dssp --CCEEEEETTTSSSHH---HHHHHHHHT--TCEEEEEECSS
T ss_pred CCceEEEEECCCcHHHH---HHHHHHHhC--CCEEEEEEcCC
Confidence 468999999984 3 32 223333322 47898877644
No 96
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=65.79 E-value=12 Score=29.76 Aligned_cols=84 Identities=11% Similarity=0.074 Sum_probs=50.3
Q ss_pred CCceEEEEEeCCc--h-hHHHHHHHHHcCCCCceEEEEeeCC-CCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 37 PKYKVAVLASKQE--H-CLVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~-~l~~ll~~~~~~~l~~~I~~Vit~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
.++||.|+.+|+- | -.++++.....+.+.+.=+++-..+ ..+.+....+.++++||++.....+ ...++ .+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr-~l~~~----~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRAR-QITKA----DF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCC-CCCSH----HH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeec-cCCHh----Hh
Confidence 4578999999873 3 3567887766554444444443312 2335667889999999997421111 11111 23
Q ss_pred hCCCEEEEEecCC
Q 024606 113 QNTDFLVLARYMQ 125 (265)
Q Consensus 113 ~~~D~vv~ag~~~ 125 (265)
.++|+|+...-.+
T Consensus 78 ~~~DlIi~m~~~~ 90 (146)
T 1p8a_A 78 SKFDVIAALDQSI 90 (146)
T ss_dssp HSCSEEEESSHHH
T ss_pred hcCCEEEEeChHH
Confidence 3899999876433
No 97
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=65.72 E-value=12 Score=28.52 Aligned_cols=69 Identities=19% Similarity=0.292 Sum_probs=36.8
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh--hC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--QN 114 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l--~~ 114 (265)
+++|+|+|.|. |..+...|.. .| ++++++ ... ....+.+++.|+.+...+. .+++.++.+ .+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g---~~V~~i-d~~-----~~~~~~~~~~~~~~~~gd~----~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AG---KKVLAV-DKS-----KEKIELLEDEGFDAVIADP----TDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEE-ESC-----HHHHHHHHHTTCEEEECCT----TCHHHHHHSCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CC---CeEEEE-ECC-----HHHHHHHHHCCCcEEECCC----CCHHHHHhCCccc
Confidence 46899998765 4433333322 23 566533 221 1234556667887765432 223444433 37
Q ss_pred CCEEEEE
Q 024606 115 TDFLVLA 121 (265)
Q Consensus 115 ~D~vv~a 121 (265)
+|+++++
T Consensus 71 ~d~vi~~ 77 (141)
T 3llv_A 71 VSAVLIT 77 (141)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8988765
No 98
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=65.47 E-value=41 Score=25.46 Aligned_cols=80 Identities=15% Similarity=0.238 Sum_probs=47.0
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
.+|+++|.-. .-++..+++++..=+-..++..++.... +....+.+.++++|+.+.. .. ...+++.+.+.++|+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g-~~~~~~~~~~~~~~~~v~~-g~---~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKG-PDEKKIKLLAQKLGVKAEF-GF---VNSNELLEILKTCTL 77 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCS-TTHHHHHHHHHHHTCEEEC-CC---CCHHHHHHHHTTCSE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCC-ccHHHHHHHHHHcCCeEEE-ee---cCHHHHHHHHHhCCE
Confidence 4555555432 2356777777653111134555555431 1235678889999985543 32 234678888889999
Q ss_pred EEEEec
Q 024606 118 LVLARY 123 (265)
Q Consensus 118 vv~ag~ 123 (265)
+|+.+.
T Consensus 78 ~v~ps~ 83 (166)
T 3qhp_A 78 YVHAAN 83 (166)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 987554
No 99
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.44 E-value=34 Score=24.36 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=37.6
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
+++||+|+|.|. |..+...+. ..| .++|.+ + .++ . .-.+.+.+.|+.....+- ...+++.+.+.++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~--~~g--~~~v~~-~-~r~---~-~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLK--TSS--NYSVTV-A-DHD---L-AALAVLNRMGVATKQVDA---KDEAGLAKALGGF 70 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHH--HCS--SEEEEE-E-ESC---H-HHHHHHHTTTCEEEECCT---TCHHHHHHHTTTC
T ss_pred CcCeEEEECCCHHHHHHHHHHH--hCC--CceEEE-E-eCC---H-HHHHHHHhCCCcEEEecC---CCHHHHHHHHcCC
Confidence 457899988743 333222221 223 256543 3 331 1 112333466777665432 1235566666789
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|++|.+.
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9988764
No 100
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=65.09 E-value=15 Score=27.19 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=35.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH-hhCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~-l~~~ 115 (265)
.|||+|+|.|. |..+...|.. .| +++++ +... ...+.++.++.|+.+...+. ...+.+.+. +.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g---~~v~~-~d~~----~~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KG---HDIVL-IDID----KDICKKASAEIDALVINGDC---TKIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TT---CEEEE-EESC----HHHHHHHHHHCSSEEEESCT---TSHHHHHHTTTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CeEEE-EECC----HHHHHHHHHhcCcEEEEcCC---CCHHHHHHcCcccC
Confidence 37999998765 3333322222 23 56653 3322 12334444556876554221 122233322 3479
Q ss_pred CEEEEE
Q 024606 116 DFLVLA 121 (265)
Q Consensus 116 D~vv~a 121 (265)
|+++++
T Consensus 71 d~vi~~ 76 (140)
T 1lss_A 71 DMYIAV 76 (140)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 998876
No 101
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=64.99 E-value=14 Score=29.94 Aligned_cols=82 Identities=17% Similarity=0.123 Sum_probs=45.3
Q ss_pred CCceEEEEEeCCc--hh-HHHHHHHHHc-CCCC--ceEE--EEeeCC-CCCCCcHHHHHHHHcCCCEEEECCCCCchHHH
Q 024606 37 PKYKVAVLASKQE--HC-LVDFLYGWQE-GKLP--VEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~-l~~ll~~~~~-~~l~--~~I~--~Vit~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
+++||.|+.+|+- |. .++++..... ..+. .+|. ++-..+ ..+.+....+.++++||++. ...+ ... +
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar-~l~-~- 78 (163)
T 1u2p_A 3 DPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAA-QVG-T- 78 (163)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCC-BCC-H-
T ss_pred CCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceee-ECC-h-
Confidence 4589999999884 33 4556655421 1122 3332 222211 23356678899999999975 2221 111 1
Q ss_pred HHHHhhCCCEEEEEecCC
Q 024606 108 LLELVQNTDFLVLARYMQ 125 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~ 125 (265)
+.+.+ |+|+...-.+
T Consensus 79 --~~~~~-DlIi~Md~~~ 93 (163)
T 1u2p_A 79 --EHLAA-DLLVALDRNH 93 (163)
T ss_dssp --HHHTS-SEEEESSHHH
T ss_pred --hhccC-CEEEEeCHHH
Confidence 12348 9999876443
No 102
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=64.66 E-value=24 Score=32.31 Aligned_cols=163 Identities=9% Similarity=0.100 Sum_probs=86.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.++ ..+|. +.++.. .+ .+.+++.|+.. +. ++.++++++|
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~-----G~~V~--~~dr~~---~~-~~~~~~~g~~~--~~--------~l~ell~~aD 222 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPF-----GCNLL--YHDRLQ---MA-PELEKETGAKF--VE--------DLNEMLPKCD 222 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-----CCEEE--EECSSC---CC-HHHHHHHCCEE--CS--------CHHHHGGGCS
T ss_pred CCEEeEEEeCHHHHHHHHHHHHC-----CCEEE--EeCCCc---cC-HHHHHhCCCeE--cC--------CHHHHHhcCC
Confidence 47899999887 55554444443 35653 333321 11 45566667632 11 2445667899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++--.. --..+++..+.++..+.+.+-+.-| ||. ..+..|+.+
T Consensus 223 vV~l~~Plt-------------------------~~t~~li~~~~l~~mk~gailIN~a-----RG~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 223 VIVINMPLT-------------------------EKTRGMFNKELIGKLKKGVLIVNNA-----RGAIMERQAVVDAVES 272 (351)
T ss_dssp EEEECSCCC-------------------------TTTTTCBSHHHHHHSCTTEEEEECS-----CGGGBCHHHHHHHHHH
T ss_pred EEEECCCCC-------------------------HHHHHhhcHHHHhcCCCCCEEEECc-----CchhhCHHHHHHHHHh
Confidence 998764211 1133488899999888775555443 453 456777877
Q ss_pred CCCE-eEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKL-IGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~-~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|.-. .|.-|+.-..--..-|.+.-..+-+.|.-...+...+ ....+.+.+.+..+.+|+
T Consensus 273 g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~--~~~~~~~~~nl~~~~~g~ 332 (351)
T 3jtm_A 273 GHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQ--LRYAAGTKDMLERYFKGE 332 (351)
T ss_dssp TSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHH--HHHHHHHHHHHHHHHHTC
T ss_pred CCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHH--HHHHHHHHHHHHHHHcCC
Confidence 7522 3444444333222233333334445555322222221 112334556666777776
No 103
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=64.09 E-value=11 Score=35.26 Aligned_cols=51 Identities=14% Similarity=0.220 Sum_probs=31.1
Q ss_pred CCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC
Q 024606 36 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 93 (265)
Q Consensus 36 ~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP 93 (265)
.+++||+|+|.|. |. ..++..+... -.+++++|+... .....++++++|++
T Consensus 81 ~~~irigiIG~G~~g~--~~~~~~l~~~-~~~~lvav~d~~----~~~~~~~a~~~g~~ 132 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYAL--NQILPGFAGC-QHSRIEALVSGN----AEKAKIVAAEYGVD 132 (433)
T ss_dssp CCCEEEEEECCSHHHH--HTHHHHTTTC-SSEEEEEEECSC----HHHHHHHHHHTTCC
T ss_pred CCceEEEEECCcHHHH--HHHHHHHhhC-CCcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 4468999999865 21 1334443321 147888776543 23456788899987
No 104
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=64.01 E-value=7.7 Score=33.98 Aligned_cols=112 Identities=14% Similarity=0.167 Sum_probs=56.8
Q ss_pred CceEEEEEeCC-chhHH-HHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQ-EHCLV-DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
++||+|+|.|. |+.+. .|++ .|....+|. ++++ ......++++++|+.+. .. ..+.++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~---~g~~~~~V~--v~dr---~~~~~~~l~~~~gi~~~--~~--------~~~~~~~a 64 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA---NGYDPNRIC--VTNR---SLDKLDFFKEKCGVHTT--QD--------NRQGALNA 64 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH---TTCCGGGEE--EECS---SSHHHHHHHHTTCCEEE--SC--------HHHHHSSC
T ss_pred CCEEEEEcccHHHHHHHHHHHH---CCCCCCeEE--EEeC---CHHHHHHHHHHcCCEEe--CC--------hHHHHhcC
Confidence 47999999876 44333 3332 231122553 4454 23345566666787543 11 22345689
Q ss_pred CEEEEEecCCCCcchhhhhhh-hhhhhh--hccc-CcccccccccCChhHHh-hcC--CCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLG-YKLLES--LSSK-GSLTSYFNMILSGKFLR-SYG--KDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~-~~~~~~--~~~~-~~~s~y~~~il~~~il~-~~~--~~~iNiHpsl 176 (265)
|+|+++- ||+ .... .+.++. +.++ .++|+-.. ++-+.++ ..+ .+++..||..
T Consensus 65 DvVilav-----~p~--~~~~vl~~l~~~~l~~~~iiiS~~ag--i~~~~l~~~l~~~~~vvr~mPn~ 123 (280)
T 3tri_A 65 DVVVLAV-----KPH--QIKMVCEELKDILSETKILVISLAVG--VTTPLIEKWLGKASRIVRAMPNT 123 (280)
T ss_dssp SEEEECS-----CGG--GHHHHHHHHHHHHHTTTCEEEECCTT--CCHHHHHHHHTCCSSEEEEECCG
T ss_pred CeEEEEe-----CHH--HHHHHHHHHHhhccCCCeEEEEecCC--CCHHHHHHHcCCCCeEEEEecCC
Confidence 9999875 222 1111 222332 4555 45544332 2333333 333 4688999864
No 105
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=63.87 E-value=56 Score=29.18 Aligned_cols=53 Identities=6% Similarity=0.023 Sum_probs=32.3
Q ss_pred CCceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 37 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
+++||+++..+. |+ .+.+|.+++.+- .++|+.+.+.. ..+..++.|++++.++
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~-------~~~~~~~~g~~~~~~~ 66 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDE-------FAAQVKAAGATPVVYD 66 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGG-------GHHHHHHHTCEEEECC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEecC
Confidence 468999986654 44 245566665542 37887544322 2455667788877665
No 106
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=63.74 E-value=12 Score=31.21 Aligned_cols=57 Identities=12% Similarity=-0.083 Sum_probs=37.1
Q ss_pred CceEEEEEeCCc-h-hHHHHHHHHHcCCCCceEEEEeeCCCCC-CCcHHHHHHHHcCCCEEEECC
Q 024606 38 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 38 ~~rIav~~Sg~g-~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~~~a~~~gIP~~~~~~ 99 (265)
+.||++..||+- | .+..++.. . ..++.++..+.... .-..+.++|++.|||++.++-
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~--~---g~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~~ 65 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK--L---GYNPHLITINFGVIPSYKLAEETAKILGFKHKVITL 65 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH--T---TEEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEEC
T ss_pred CCeEEEEEECcHHHHHHHHHHHH--c---CCCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 468999999863 3 34444432 2 35777776655322 234578999999999887653
No 107
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=63.20 E-value=14 Score=30.06 Aligned_cols=83 Identities=10% Similarity=0.003 Sum_probs=44.6
Q ss_pred CCceEEEEEeCCc--hh-HHHHHHHHHc-CCC--CceEE--EEeeCC-CCCCCcHHHHHHHHcCCCEEEECCCCCchHHH
Q 024606 37 PKYKVAVLASKQE--HC-LVDFLYGWQE-GKL--PVEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~-l~~ll~~~~~-~~l--~~~I~--~Vit~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
+|+||.|+.+|+- |. .++++..... -.+ ..+|. ++-..+ ..+.+....+.++++||++ ....+ ... ++
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~ar-~l~-~~ 79 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQV-DSISR-PVV-SS 79 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCC-CCBCC-BCC-HH
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCC-CCeee-ECC-HH
Confidence 4679999999874 33 3456554331 111 13332 222211 2234566889999999997 31111 111 22
Q ss_pred HHHHhhCCCEEEEEecCC
Q 024606 108 LLELVQNTDFLVLARYMQ 125 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~ 125 (265)
.+.++|+|+...-.+
T Consensus 80 ---~~~~~DlIl~Md~~~ 94 (161)
T 3jvi_A 80 ---DFKNFDYIFAMDNDN 94 (161)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HhcCCCEEEEeChHH
Confidence 233789999876433
No 108
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=63.12 E-value=9.6 Score=31.51 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=36.0
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH--hhCC
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--VQNT 115 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~--l~~~ 115 (265)
|||+|+|.|. |..+...|.. .| +++++ +... ...+.+++++.|+++...+. .+++.++. +.++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g---~~v~v-id~~----~~~~~~l~~~~~~~~i~gd~----~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RK---YGVVI-INKD----RELCEEFAKKLKATIIHGDG----SHKEILRDAEVSKN 66 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TT---CCEEE-EESC----HHHHHHHHHHSSSEEEESCT----TSHHHHHHHTCCTT
T ss_pred CEEEEECCCHHHHHHHHHHHh--CC---CeEEE-EECC----HHHHHHHHHHcCCeEEEcCC----CCHHHHHhcCcccC
Confidence 6899998755 4333333322 23 56653 3322 12344556667888765332 12233333 3378
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+++++-
T Consensus 67 d~vi~~~ 73 (218)
T 3l4b_C 67 DVVVILT 73 (218)
T ss_dssp CEEEECC
T ss_pred CEEEEec
Confidence 8877653
No 109
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=62.37 E-value=5 Score=34.10 Aligned_cols=66 Identities=18% Similarity=0.391 Sum_probs=35.2
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.+|||+|+|.|. |..+ ...+... ..+| . +.+++ .....++++++|+.+. . . ..+.++++
T Consensus 2 ~~m~i~iiG~G~mG~~~---a~~l~~~--g~~v-~-~~~~~---~~~~~~~~~~~g~~~~--~-----~---~~~~~~~~ 61 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAI---IKGLKQT--PHEL-I-ISGSS---LERSKEIAEQLALPYA--M-----S---HQDLIDQV 61 (259)
T ss_dssp -CCEEEEECCSHHHHHH---HHHHTTS--SCEE-E-EECSS---HHHHHHHHHHHTCCBC--S-----S---HHHHHHTC
T ss_pred CccEEEEECCCHHHHHH---HHHHHhC--CCeE-E-EECCC---HHHHHHHHHHcCCEee--C-----C---HHHHHhcC
Confidence 358999999876 4333 2222221 2444 3 34442 2334556666787642 1 1 22334589
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 62 D~Vi~~v 68 (259)
T 2ahr_A 62 DLVILGI 68 (259)
T ss_dssp SEEEECS
T ss_pred CEEEEEe
Confidence 9999875
No 110
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=61.69 E-value=34 Score=25.87 Aligned_cols=59 Identities=17% Similarity=0.242 Sum_probs=33.9
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCC-----------cHHHHHHHHcCCCEEEEC
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----------SHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~-----------~~v~~~a~~~gIP~~~~~ 98 (265)
.+.|++++|+|. ..+.+++.+.+.. ..++++++...+...+ ..+.++++++++....+.
T Consensus 3 ~~~~vlIiGaG~--~g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia 72 (141)
T 3nkl_A 3 AKKKVLIYGAGS--AGLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLA 72 (141)
T ss_dssp CCEEEEEECCSH--HHHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEEC
T ss_pred CCCEEEEECCCH--HHHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEe
Confidence 457898888765 3344555544332 5899999876532111 234556666666654443
No 111
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=61.25 E-value=51 Score=30.93 Aligned_cols=128 Identities=10% Similarity=0.104 Sum_probs=66.4
Q ss_pred CceEEEEEe-----CCchh-HHHHHHHHHcCCCCceEEEEeeCCCCC-CCcHHH----HHHHHcCCCEEEECCCCCchHH
Q 024606 38 KYKVAVLAS-----KQEHC-LVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI----RFLERHGIPYHYLCAKENEREE 106 (265)
Q Consensus 38 ~~rIav~~S-----g~g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~----~~a~~~gIP~~~~~~~~~~~~~ 106 (265)
..||++++- |.+.| ...++.++. .+++++. +++ |+.. +...+. +.|++.|..+.....
T Consensus 191 Glkva~vgd~~~~~G~~nnVa~Sli~~~~--~lG~~v~-~~~-P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d------- 259 (399)
T 3q98_A 191 GKKIAMTWAYSPSYGKPLSVPQGIIGLMT--RFGMDVT-LAH-PEGYDLIPDVVEVAKNNAKASGGSFRQVTS------- 259 (399)
T ss_dssp TCEEEEECCCCSSCCCCTHHHHHHHHHHG--GGTCEEE-EEC-CTTCCCCHHHHHHHHHHHHHHTCEEEEESC-------
T ss_pred CCEEEEEEecccccCcchHHHHHHHHHHH--HcCCEEE-EEC-CcccCCCHHHHHHHHHHHHHcCCEEEEEcC-------
Confidence 468998863 44433 456666542 2346653 344 3321 233333 456678887765431
Q ss_pred HHHHHhhCCCEEEEEecCCCCcchhhhhh-----hhhhhhhhccc--CcccccccccCChhHHhhcCC-CeEEecCCCCC
Q 024606 107 ELLELVQNTDFLVLARYMQPVPLQKEAYL-----GYKLLESLSSK--GSLTSYFNMILSGKFLRSYGK-DVINIHHGLLP 178 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag~~~~ip~~~~~~~-----~~~~~~~~~~~--~~~s~y~~~il~~~il~~~~~-~~iNiHpslLP 178 (265)
+.+.++++|+|..-.|..+ -.+.|..+ .++-.+..+-. .....+..|.+..++++..+. .++-+|+ ||
T Consensus 260 -~~eav~~aDvVytd~W~Sm-g~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHc--LP 335 (399)
T 3q98_A 260 -MEEAFKDADIVYPKSWAPY-KVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHC--LP 335 (399)
T ss_dssp -HHHHHTTCSEEEECCCCCH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCC--SS
T ss_pred -HHHHhCCCCEEEecCcccc-chhhhhhhhccccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECC--CC
Confidence 3456779999988776320 00111100 00000000000 011223457899999988764 6899998 67
Q ss_pred CC
Q 024606 179 SF 180 (265)
Q Consensus 179 ~y 180 (265)
.+
T Consensus 336 a~ 337 (399)
T 3q98_A 336 AD 337 (399)
T ss_dssp CC
T ss_pred CC
Confidence 77
No 112
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=61.22 E-value=21 Score=31.98 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=32.8
Q ss_pred CceEEEEEeCC-chh--HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 38 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~--l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
+.||.+.+.|+ ||. ..+|.+++++. .++|..|-+.+ . --.++..+.|++++.++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~-g----~e~~~v~~~g~~~~~i~ 58 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPR-G----IENDLVPKAGLPLHLIQ 58 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSS-S----THHHHTGGGTCCEEECC
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCc-h----HhhchhhhcCCcEEEEE
Confidence 47898887777 453 34566666543 47886554432 1 11355677899988765
No 113
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=61.09 E-value=4.6 Score=34.52 Aligned_cols=66 Identities=14% Similarity=0.256 Sum_probs=35.7
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
+|||+|+|.|. |+.+...+.. .| ++++.++ ++ ......++++++|+.+. .. +.+.++++|
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~--~g---~~~v~~~-~~---~~~~~~~~~~~~g~~~~--~~--------~~~~~~~~D 70 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR--KG---FRIVQVY-SR---TEESARELAQKVEAEYT--TD--------LAEVNPYAK 70 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH--HT---CCEEEEE-CS---SHHHHHHHHHHTTCEEE--SC--------GGGSCSCCS
T ss_pred CCeEEEEcCCHHHHHHHHHHHH--CC---CeEEEEE-eC---CHHHHHHHHHHcCCcee--CC--------HHHHhcCCC
Confidence 47999999876 5444333322 23 4544444 33 12334556666687543 11 112334789
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++-
T Consensus 71 vvi~av 76 (266)
T 3d1l_A 71 LYIVSL 76 (266)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888764
No 114
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=60.25 E-value=5.7 Score=31.14 Aligned_cols=77 Identities=12% Similarity=0.067 Sum_probs=36.6
Q ss_pred cCCCCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHH-HcCCCEEEECCCCCchHHHHH
Q 024606 32 VPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-RHGIPYHYLCAKENEREEELL 109 (265)
Q Consensus 32 ~~~~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~-~~gIP~~~~~~~~~~~~~~l~ 109 (265)
++...+.++|+|+|.|. |..+...+.. .| ++|+++-.+.+ . .+.++ +.|+.+...+. ...+.+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~--~g---~~V~vid~~~~-----~-~~~~~~~~g~~~~~~d~---~~~~~l~ 78 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASS--SG---HSVVVVDKNEY-----A-FHRLNSEFSGFTVVGDA---AEFETLK 78 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCGG-----G-GGGSCTTCCSEEEESCT---TSHHHHH
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCHH-----H-HHHHHhcCCCcEEEecC---CCHHHHH
Confidence 45566678999998765 4444433332 23 56654322221 1 22333 56766543221 1122233
Q ss_pred HH-hhCCCEEEEEe
Q 024606 110 EL-VQNTDFLVLAR 122 (265)
Q Consensus 110 ~~-l~~~D~vv~ag 122 (265)
+. +.++|+++++-
T Consensus 79 ~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 79 ECGMEKADMVFAFT 92 (155)
T ss_dssp TTTGGGCSEEEECS
T ss_pred HcCcccCCEEEEEe
Confidence 22 44799988764
No 115
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=59.70 E-value=22 Score=31.48 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=35.2
Q ss_pred CCCCceEEEEEeCCc-h--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECC
Q 024606 35 IDPKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g-~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~ 99 (265)
...+|||++++.+.+ + .+.+|.+++.+- .++|. |++.. ...+..++.|+++..++.
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~-v~~~~------~~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVT-FATGE------GFAGTLRKLGFEPVATGM 75 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEE-EEECG------GGHHHHHHTTCEEEECCC
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEE-EEccH------HHHHHHHhcCCceeecCc
Confidence 455799999886653 3 234566665542 37876 44533 136777888999987763
No 116
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=59.46 E-value=7.6 Score=34.83 Aligned_cols=46 Identities=7% Similarity=0.075 Sum_probs=27.3
Q ss_pred CceEEEEEeCC-ch-hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC
Q 024606 38 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 93 (265)
Q Consensus 38 ~~rIav~~Sg~-g~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP 93 (265)
|+||+|+|.|. |. .....+.. ...+++++|+... ...++|+++++|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~----~~~~~l~av~d~~------~~~~~a~~~~~~ 49 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI----RETLEVKTIFDLH------VNEKAAAPFKEK 49 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT----CTTEEEEEEECTT------CCHHHHHHHHTT
T ss_pred eeEEEEEccCHHHHHHHHHHHhh----CCCeEEEEEECCC------HHHHHHHhhCCC
Confidence 58999999886 32 12222222 1148898887643 236777775443
No 117
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=58.75 E-value=16 Score=31.78 Aligned_cols=65 Identities=12% Similarity=0.079 Sum_probs=35.1
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.++||+|+|.|. |..+...+.. .| ++|. +.+++ ..-.+.+.+.|+... . ...+.++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~--~G---~~V~--~~d~~----~~~~~~~~~~g~~~~--~--------~~~~~~~~a 60 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLK--AG---YLLN--VFDLV----QSAVDGLVAAGASAA--R--------SARDAVQGA 60 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHH--TT---CEEE--EECSS----HHHHHHHHHTTCEEC--S--------SHHHHHTTC
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CC---CeEE--EEcCC----HHHHHHHHHCCCeEc--C--------CHHHHHhCC
Confidence 468999999987 5554433322 23 4653 33442 122344455575432 1 123445589
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 61 Dvvi~~v 67 (302)
T 2h78_A 61 DVVISML 67 (302)
T ss_dssp SEEEECC
T ss_pred CeEEEEC
Confidence 9998764
No 118
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=58.37 E-value=8.4 Score=33.90 Aligned_cols=47 Identities=9% Similarity=0.138 Sum_probs=28.0
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 93 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP 93 (265)
+||+|+|.|. |... ++.++.++ ..++++|+... .....++++++|++
T Consensus 1 ~~vgiiG~G~~g~~~--~~~~l~~~--~~~~vav~d~~----~~~~~~~~~~~g~~ 48 (332)
T 2glx_A 1 NRWGLIGASTIAREW--VIGAIRAT--GGEVVSMMSTS----AERGAAYATENGIG 48 (332)
T ss_dssp CEEEEESCCHHHHHT--HHHHHHHT--TCEEEEEECSC----HHHHHHHHHHTTCS
T ss_pred CeEEEEcccHHHHHh--hhHHhhcC--CCeEEEEECCC----HHHHHHHHHHcCCC
Confidence 5899999875 3221 02222222 47887776533 23456778888987
No 119
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=58.32 E-value=6.1 Score=33.57 Aligned_cols=67 Identities=13% Similarity=0.249 Sum_probs=36.6
Q ss_pred CceEEEEEeCC-chhHH-HHHHHHHcCCCC-ceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQ-EHCLV-DFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~-~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
++||+|+|.|. |+.+. .|.++ |..+ .+|. +.+++ .....++++++|+.+. .. ..+.+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~---g~~~~~~V~--~~~r~---~~~~~~~~~~~g~~~~--~~--------~~e~~~~ 63 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK---NIVSSNQII--CSDLN---TANLKNASEKYGLTTT--TD--------NNEVAKN 63 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TSSCGGGEE--EECSC---HHHHHHHHHHHCCEEC--SC--------HHHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHhC---CCCCCCeEE--EEeCC---HHHHHHHHHHhCCEEe--CC--------hHHHHHh
Confidence 47999999887 44433 33332 3222 2553 34442 2345566667787532 11 1233457
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++-
T Consensus 64 aDvVilav 71 (247)
T 3gt0_A 64 ADILILSI 71 (247)
T ss_dssp CSEEEECS
T ss_pred CCEEEEEe
Confidence 99999875
No 120
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=58.03 E-value=14 Score=29.75 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=45.7
Q ss_pred cCCCCCCceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHH
Q 024606 32 VPDIDPKYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 108 (265)
Q Consensus 32 ~~~~~~~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l 108 (265)
+|-...|+||.|+.+|+- |. .++++..+..+. .+|.--=+.+..+.+....+.++++||++.....+ ... ++
T Consensus 14 ~~~~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~h~ar-~l~-~~- 88 (148)
T 3rh0_A 14 VPRGSHMKSVLFVCVGNGGKSQMAAALAQKYASDS--VEIHSAGTKPAQGLNQLSVESIAEVGADMSQGIPK-AID-PE- 88 (148)
T ss_dssp ------CCEEEEEESSSSSHHHHHHHHHHHHCCTT--SEEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCC-BCC-HH-
T ss_pred ccCcCCCCEEEEECCCchhHHHHHHHHHHHhcCCC--EEEEecccCCCCCCCHHHHHHHHHcCCCcCCCeee-ECC-HH-
Confidence 455666789999999874 33 456777654443 34432222333335667889999999986321111 111 22
Q ss_pred HHHhhCCCEEEEEe
Q 024606 109 LELVQNTDFLVLAR 122 (265)
Q Consensus 109 ~~~l~~~D~vv~ag 122 (265)
.+.++|+|+..-
T Consensus 89 --~~~~~DlIitM~ 100 (148)
T 3rh0_A 89 --LLRTVDRVVILG 100 (148)
T ss_dssp --HHHHCSEEEEES
T ss_pred --HhcCCCEEEEec
Confidence 223689998763
No 121
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=57.74 E-value=45 Score=29.47 Aligned_cols=55 Identities=16% Similarity=0.294 Sum_probs=34.0
Q ss_pred CCCCceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 35 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
...+|||+|+..+. |+ .+..|.+++.+- .++|. |++.. ...+..+..|+++..++
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~-v~~~~------~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVL-VAASE------NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEE-EEEEG------GGHHHHHHTTCCEEEEE
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEE-EEcCH------HHHHHHHhCCCeeEecC
Confidence 45579999887654 33 245666666542 37876 44433 24677788999998775
No 122
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=57.74 E-value=20 Score=31.75 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=35.3
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.+|||+|+|.|. |..+...+.. .| ++|. +.+++ ... .+.+.+.|+... . .+.+.++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr~---~~~-~~~l~~~g~~~~--~--------~~~e~~~~a 88 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AG---YALQ--VWNRT---PAR-AASLAALGATIH--E--------QARAAARDA 88 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TT---CEEE--EECSC---HHH-HHHHHTTTCEEE--S--------SHHHHHTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CC---CeEE--EEcCC---HHH-HHHHHHCCCEee--C--------CHHHHHhcC
Confidence 458999999987 5554433322 23 5654 33442 122 333444566332 1 123455689
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 89 DvVi~~v 95 (320)
T 4dll_A 89 DIVVSML 95 (320)
T ss_dssp SEEEECC
T ss_pred CEEEEEC
Confidence 9998764
No 123
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=56.63 E-value=40 Score=29.89 Aligned_cols=54 Identities=11% Similarity=0.209 Sum_probs=33.5
Q ss_pred CCCCceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 35 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
...+|||+|+..+. |+ .+..|.+++.+- .++|. |++. . ..+..+..|+++..++
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~-v~~~-~------~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVL-IAVA-E------HADRAAAAGLEVVDVA 73 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEE-EEES-S------CHHHHHTTTCEEEESS
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEE-Eecc-c------hHHHHHhCCCeeEecC
Confidence 44568999987654 33 245666666542 37776 4453 2 2566778899988765
No 124
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=56.43 E-value=16 Score=34.06 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=29.9
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
.+++|+|+|.|. |..+...|.. .| +++++|=.++ ...+.+++.|+++++.+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g---~~vvvId~d~------~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SG---VKMVVLDHDP------DHIETLRKFGMKVFYGD 54 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCH------HHHHHHHHTTCCCEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHhCCCeEEEcC
Confidence 347899999876 4444444443 23 5665433322 33566778899987644
No 125
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=56.00 E-value=72 Score=30.13 Aligned_cols=127 Identities=12% Similarity=0.077 Sum_probs=67.0
Q ss_pred CceEEEEEe-----CCchh-HHHHHHHHHcCCCCceEEEEeeCCCCC-CCcHHHH----HHHHcCCCEEEECCCCCchHH
Q 024606 38 KYKVAVLAS-----KQEHC-LVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIR----FLERHGIPYHYLCAKENEREE 106 (265)
Q Consensus 38 ~~rIav~~S-----g~g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~~----~a~~~gIP~~~~~~~~~~~~~ 106 (265)
..||++++- |.+.| ...++.++. .++++|. +++ ++.- +...+.+ .|++.|..+....
T Consensus 188 Glkva~vgd~~~s~Gd~nnVa~Sli~~l~--~lG~~v~-l~~-P~~~~~~p~~~~~a~~~a~~~G~~v~~~~-------- 255 (418)
T 2yfk_A 188 GKKVAMTWAYSPSYGKPLSVPQGIVGLMT--RLGMDVV-LAH-PEGYEIMPEVEEVAKKNAAEFGGNFTKTN-------- 255 (418)
T ss_dssp TCEEEEECCCCSSSCCCSHHHHHHHHHHG--GGTCEEE-EEC-CTTCCCCHHHHHHHHHHHHHHSSEEEEES--------
T ss_pred CCEEEEEeccccccCccchHHHHHHHHHH--HcCCEEE-EEC-CccccCCHHHHHHHHHHHHHcCCEEEEEc--------
Confidence 478999862 44432 455666543 2346663 333 4322 1223333 4566787665532
Q ss_pred HHHHHhhCCCEEEEEecCCCCcchhhhhh----h-hhhh---hh--hcccCcccccccccCChhHHhhcCC-CeEEecCC
Q 024606 107 ELLELVQNTDFLVLARYMQPVPLQKEAYL----G-YKLL---ES--LSSKGSLTSYFNMILSGKFLRSYGK-DVINIHHG 175 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag~~~~ip~~~~~~~----~-~~~~---~~--~~~~~~~s~y~~~il~~~il~~~~~-~~iNiHps 175 (265)
.+.+.++++|+|..-.|..+ -.|.|-.+ + ...+ +. ++.. .....|.+..++++..+. .++-+||.
T Consensus 256 d~~eav~~ADVVytd~W~sm-~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~---~~~~~y~vt~elm~~ak~~dai~MHcL 331 (418)
T 2yfk_A 256 SMAEAFKDADVVYPKSWAPF-AAMEKRTELYGNGDQAGIDQLEQELLSQN---KKHKDWECTEELMKTTKDGKALYMHCL 331 (418)
T ss_dssp CHHHHHTTCSEEEECCCCCH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHH---GGGTTCCBCHHHHHTSGGGCCEECCCS
T ss_pred CHHHHhcCCCEEEEccccch-hHHHHHhhhhccccchhhhhhhhhhhhHH---HHHhhcCCCHHHHHhcCCCCeEEECCC
Confidence 13456779999988766420 01111110 0 0000 00 1111 112256899999998865 79999974
Q ss_pred CCCCCC-C
Q 024606 176 LLPSFK-G 182 (265)
Q Consensus 176 lLP~yR-G 182 (265)
|.+| |
T Consensus 332 --Pa~r~~ 337 (418)
T 2yfk_A 332 --PADITG 337 (418)
T ss_dssp --CCCEET
T ss_pred --CCCCcc
Confidence 8885 6
No 126
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=55.88 E-value=34 Score=30.39 Aligned_cols=122 Identities=16% Similarity=0.075 Sum_probs=57.6
Q ss_pred CceEEEEEeCC-chhHH-HHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHH-HhhC
Q 024606 38 KYKVAVLASKQ-EHCLV-DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE-LVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~-~l~~ 114 (265)
.+||+|+|.|. |..+. .|.++ |. ..+|. +.+++ ..-.+.+.+.|+-...... +.+ .+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~---G~-~~~V~--~~dr~----~~~~~~a~~~G~~~~~~~~--------~~~~~~~~ 94 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS---GF-KGKIY--GYDIN----PESISKAVDLGIIDEGTTS--------IAKVEDFS 94 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT---TC-CSEEE--EECSC----HHHHHHHHHTTSCSEEESC--------TTGGGGGC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CC-CCEEE--EEECC----HHHHHHHHHCCCcchhcCC--------HHHHhhcc
Confidence 47999999876 44433 33332 31 12553 34442 2235667788874222221 113 3558
Q ss_pred CCEEEEEecCCCCcchhhhhhhhhhhhhhcccCccccccccc--CChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 115 TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMI--LSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 115 ~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~i--l~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
+|+||++- |++...-.-.++...+.++..+....+-. +-..+.+..+..++..||-.-|...|
T Consensus 95 aDvVilav-----p~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~v~~hPm~G~e~sG 159 (314)
T 3ggo_A 95 PDFVMLSS-----PVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSG 159 (314)
T ss_dssp CSEEEECS-----CGGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEECCCCCCCS
T ss_pred CCEEEEeC-----CHHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCEEecCcccCCcccc
Confidence 99999874 32211111112223345555554433321 11122222222577778766555444
No 127
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=55.80 E-value=16 Score=31.25 Aligned_cols=104 Identities=12% Similarity=0.092 Sum_probs=59.2
Q ss_pred CCCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCC-CCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 34 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR-GPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 34 ~~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~-~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
..+.+.|+++.|.|. .-++|+..........++++++-..++ ..+. +.-+|+|++.. +++.+.+
T Consensus 80 g~~~~~~V~IvGaG~--lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~-----~~i~GvpV~~~--------~dL~~~v 144 (212)
T 3keo_A 80 NDHSTTNVMLVGCGN--IGRALLHYRFHDRNKMQISMAFDLDSNDLVGK-----TTEDGIPVYGI--------STINDHL 144 (212)
T ss_dssp TTTSCEEEEEECCSH--HHHHHTTCCCCTTSSEEEEEEEECTTSTTTTC-----BCTTCCBEEEG--------GGHHHHC
T ss_pred CCCCCCEEEEECcCH--HHHHHHHhhhcccCCeEEEEEEeCCchhccCc-----eeECCeEEeCH--------HHHHHHH
Confidence 355678999988765 224455442222235899999975533 2111 01258999742 2355666
Q ss_pred h--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCC
Q 024606 113 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPS 179 (265)
Q Consensus 113 ~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~ 179 (265)
+ ++|.+++|- |.. .++ -+-+.+.+.--.+++|+-|--|--
T Consensus 145 ~~~~Id~vIIAv-----Ps~-~aq---------------------~v~d~lv~~GIk~I~nFap~~l~v 186 (212)
T 3keo_A 145 IDSDIETAILTV-----PST-EAQ---------------------EVADILVKAGIKGILSFSPVHLTL 186 (212)
T ss_dssp -CCSCCEEEECS-----CGG-GHH---------------------HHHHHHHHHTCCEEEECSSSCCCC
T ss_pred HHcCCCEEEEec-----Cch-hHH---------------------HHHHHHHHcCCCEEEEcCCcccCC
Confidence 6 699999874 211 111 122334444456899999987643
No 128
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=55.24 E-value=33 Score=30.04 Aligned_cols=52 Identities=8% Similarity=0.017 Sum_probs=33.0
Q ss_pred CceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 38 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 38 ~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
|+||+++..+. |+ .+..|.+++.+- .++|. |+|.. ...+..++.|+++..++
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~-v~~~~------~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRIT-YVTTP------LFADEVKAAGAEVVLYK 58 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEE-EEECH------HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEE-EEcCH------HHHHHHHHcCCEEEecc
Confidence 35999887765 44 244555665432 47876 44432 24667788999988766
No 129
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=54.79 E-value=70 Score=28.65 Aligned_cols=51 Identities=12% Similarity=0.058 Sum_probs=32.8
Q ss_pred ceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 39 YKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 39 ~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
|||+++..+. |+ .+.+|.+++++- .++|. |++.. ...+..++.|++++.++
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~-v~~~~------~~~~~v~~~g~~~~~l~ 54 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADAR-MCLPP------DYVERCAEVGVPMVPVG 54 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEE-EEECG------GGHHHHHHTTCCEEECS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEE-EEeCH------HHHHHHHHcCCceeecC
Confidence 7899988776 43 244566665542 36775 45533 24678888999998776
No 130
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=54.68 E-value=63 Score=29.74 Aligned_cols=159 Identities=12% Similarity=0.061 Sum_probs=84.5
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.+ +..+|. +.++... .+.+.+.|+.. . ++.++++++|
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~-----fG~~V~--~~d~~~~-----~~~~~~~g~~~---~--------~l~ell~~aD 232 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSG-----FRARIR--VFDPWLP-----RSMLEENGVEP---A--------SLEDVLTKSD 232 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTT-----SCCEEE--EECSSSC-----HHHHHHTTCEE---C--------CHHHHHHSCS
T ss_pred CCEEEEecCCcccHHHHHhhhh-----CCCEEE--EECCCCC-----HHHHhhcCeee---C--------CHHHHHhcCC
Confidence 36899999887 5444444433 245654 3343211 34566677642 1 1345666999
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++--.- --.++++..+.++..+.+.+-+--| ||. ..+..|+.+
T Consensus 233 vV~l~~Plt-------------------------~~T~~li~~~~l~~mk~gailIN~a-----RG~~vde~aL~~aL~~ 282 (365)
T 4hy3_A 233 FIFVVAAVT-------------------------SENKRFLGAEAFSSMRRGAAFILLS-----RADVVDFDALMAAVSS 282 (365)
T ss_dssp EEEECSCSS-------------------------CC---CCCHHHHHTSCTTCEEEECS-----CGGGSCHHHHHHHHHT
T ss_pred EEEEcCcCC-------------------------HHHHhhcCHHHHhcCCCCcEEEECc-----CCchhCHHHHHHHHHc
Confidence 998764211 1123488899999887664433333 553 456778888
Q ss_pred CCCEeEEEEEEecCccCCCCeeEEEEEecCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhCCe
Q 024606 193 GVKLIGATSHFVTEELDAGPIIEQMVERVSHR---DNLRTFVQKSEDVEKQCLAKAIKSYCELRV 254 (265)
Q Consensus 193 G~~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~---dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~ 254 (265)
|.-..|.-|+.-..--..-+.+....+-+.|. .|.++ .+++ .+...+-|..+.+|+-
T Consensus 283 g~i~aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~-~~~~----~~~~~~ni~~~~~G~~ 342 (365)
T 4hy3_A 283 GHIVAASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSA-FKKM----GDMVLEDMDLMDRGLP 342 (365)
T ss_dssp TSSEEEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHH-HHHH----HHHHHHHHHHHHTTCC
T ss_pred CCceEEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHH-HHHH----HHHHHHHHHHHHcCCC
Confidence 87555555544332112223333334445543 34333 2232 3345556666667654
No 131
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=53.58 E-value=44 Score=31.42 Aligned_cols=105 Identities=10% Similarity=0.161 Sum_probs=58.6
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCC----------C----
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK----------E---- 101 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~----------~---- 101 (265)
+..||+|+|.|. |..+..++..+ | ++|. +++.. ....+.+++.|..+...+.. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--G---a~V~--v~D~~----~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--G---AVVS--ATDVR----PAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--T---CEEE--EECSS----TTHHHHHHHTTCEECCCCC----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--C---CEEE--EEcCC----HHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 357999999876 55555555543 3 5553 44442 12356777788764322100 0
Q ss_pred -Cc----hHHHHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 102 -NE----REEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 102 -~~----~~~~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
+. ..+.+.+.++++|+++.+-. +|..+. -.++.++.++..+.+.+-+=-|.
T Consensus 258 s~~~~~~~~~~l~e~l~~aDVVI~tvl---ipg~~a---------------------p~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQDIVITTAL---IPGRPA---------------------PRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEEECCC---CSSSCC---------------------CCCBCHHHHTTSCTTCEEEETTG
T ss_pred chhhhhhhHhHHHHHhcCCCEEEECCc---CCCCCC---------------------CEEecHHHHhcCCCCCEEEEEeC
Confidence 00 02355666679999986532 120000 01788999999887766655554
No 132
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=53.33 E-value=68 Score=28.06 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=32.0
Q ss_pred CceEEEEEeCC-chh--HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEE
Q 024606 38 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 97 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~--l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~ 97 (265)
+|||+|+..+. |+. +..|..++.+- .++|.. ++.. ...+..+..|++++.+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v-~~~~------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLI-AAPP------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEE-EECH------HHHHHHHHBTCEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEE-ecCh------hhHHHHHhCCCceeee
Confidence 48999887654 432 34566665532 377764 4432 2456678899998876
No 133
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=53.09 E-value=27 Score=30.85 Aligned_cols=73 Identities=16% Similarity=0.280 Sum_probs=44.1
Q ss_pred ceEEEEEeCC-----chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 39 YKVAVLASKQ-----EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 39 ~rIav~~Sg~-----g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
|||+|.+-++ ||.++.+.=| ..+. ++.. +|..... .+.++.|.++..++.. ..+++.+.++
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA---~~l~-~v~F-~~~~~~~------~~~~~~g~~v~~l~~~---d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLA---KQYS-DVSF-ACLPLEG------SLIDEIPYPVYELSSE---SIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHH---TTCS-SEEE-EECCCTT------CCGGGCCSCEEECSSS---CHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHH---HHHH-hCEE-EEecCcH------hHHHHCCCeEEEcCcc---CHHHHHHHHH
Confidence 6888887754 5655544222 2233 5554 4443211 1233458998876532 3456777776
Q ss_pred --CCCEEEEEecCC
Q 024606 114 --NTDFLVLARYMQ 125 (265)
Q Consensus 114 --~~D~vv~ag~~~ 125 (265)
++|++|+-+|.-
T Consensus 67 ~~~~d~lIvD~Y~~ 80 (282)
T 3hbm_A 67 EEKFELLIIDHYGI 80 (282)
T ss_dssp HHTCSEEEEECTTC
T ss_pred hCCCCEEEEECCCC
Confidence 899999999975
No 134
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=52.76 E-value=31 Score=30.97 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=39.5
Q ss_pred CCCCceEEEEE-eCC-ch--hH----HHHHHHHHcCCC--------CceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 35 IDPKYKVAVLA-SKQ-EH--CL----VDFLYGWQEGKL--------PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 35 ~~~~~rIav~~-Sg~-g~--~l----~~ll~~~~~~~l--------~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
+.+++||+++| .|. |. .+ .++.+. +.+ ..++ .+++++ .....++|+++|+|..+ .
T Consensus 3 ~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~---~~~~l~~~~~~~~~~--av~~~~---~~~a~~~a~~~~~~~~~-~ 73 (383)
T 3oqb_A 3 TTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ---GGVRLKNGDRIMPDP--ILVGRS---AEKVEALAKRFNIARWT-T 73 (383)
T ss_dssp CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHH---TSEECTTSCEEEEEE--EEECSS---SHHHHHHHHHTTCCCEE-S
T ss_pred CCceeEEEEEeccchhhhhhhHHHHHHHHhhc---CceeecCCcccceee--EEEcCC---HHHHHHHHHHhCCCccc-C
Confidence 34568999999 877 33 23 444332 211 0122 344442 34567889999998433 1
Q ss_pred CCCCchHHHHHHHhh--CCCEEEEEe
Q 024606 99 AKENEREEELLELVQ--NTDFLVLAR 122 (265)
Q Consensus 99 ~~~~~~~~~l~~~l~--~~D~vv~ag 122 (265)
. +.+++. ++|+|+++.
T Consensus 74 ~--------~~~ll~~~~iD~V~i~t 91 (383)
T 3oqb_A 74 D--------LDAALADKNDTMFFDAA 91 (383)
T ss_dssp C--------HHHHHHCSSCCEEEECS
T ss_pred C--------HHHHhcCCCCCEEEECC
Confidence 1 233444 588888775
No 135
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=52.67 E-value=43 Score=31.21 Aligned_cols=159 Identities=13% Similarity=0.199 Sum_probs=83.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.++ ..+|. +.++... . .+.+++.|+... . ++.++++++|
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~-----G~~V~--~~d~~~~--~--~~~~~~~G~~~~--~--------~l~ell~~aD 249 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPF-----DVHLH--YTDRHRL--P--ESVEKELNLTWH--A--------TREDMYPVCD 249 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-----TCEEE--EECSSCC--C--HHHHHHHTCEEC--S--------SHHHHGGGCS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-----CCEEE--EEcCCcc--c--hhhHhhcCceec--C--------CHHHHHhcCC
Confidence 46899999887 54444444432 35653 3333211 1 345667776431 1 1335666899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++- |..+ ...+++..+.++..+.+.+-+.-| ||. ..+..|+.+
T Consensus 250 vV~l~~-----Plt~--------------------~t~~li~~~~l~~mk~gailIN~a-----RG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 250 VVTLNC-----PLHP--------------------ETEHMINDETLKLFKRGAYIVNTA-----RGKLCDRDAVARALES 299 (393)
T ss_dssp EEEECS-----CCCT--------------------TTTTCBSHHHHTTSCTTEEEEECS-----CGGGBCHHHHHHHHHT
T ss_pred EEEEec-----CCch--------------------HHHHHhhHHHHhhCCCCCEEEECC-----CchHhhHHHHHHHHHc
Confidence 998863 2110 123478888888888776555555 563 346777877
Q ss_pred CCCEeEEEEEEecCc--cCCCCeeEEEEEecCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKLIGATSHFVTEE--LDAGPIIEQMVERVSHRD---NLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~~GvTvH~v~~~--~D~G~II~Q~~~~I~~~d---t~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|. ..|+-+-....+ ...-+.+....+-+.|.- |.+. .+++. +.+.+.+..+.+|+
T Consensus 300 g~-i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~-~~~~~----~~~~~nl~~~~~G~ 359 (393)
T 2nac_A 300 GR-LAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTA-QARYA----AGTREILECFFEGR 359 (393)
T ss_dssp TS-EEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHH-HHHHH----HHHHHHHHHHHHTC
T ss_pred CC-eeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHH-HHHHH----HHHHHHHHHHHcCC
Confidence 74 444444333322 122233333344455543 3332 23332 33445566666664
No 136
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=52.33 E-value=11 Score=33.89 Aligned_cols=48 Identities=10% Similarity=-0.002 Sum_probs=25.8
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI 92 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gI 92 (265)
++||+|+|.|. |.. .++.++.+. ..+++++|+... .....++|++++.
T Consensus 5 ~~rigiIG~G~~g~~--~~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~~~ 53 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQE--NLLPSLLQM-QDIRIVAACDSD----LERARRVHRFISD 53 (359)
T ss_dssp CEEEEEECCSHHHHH--THHHHHHTC-TTEEEEEEECSS----HHHHGGGGGTSCS
T ss_pred cceEEEECCCHHHHH--HHHHHHHhC-CCcEEEEEEcCC----HHHHHHHHHhcCC
Confidence 58999999887 331 122222221 147888777543 1223445555543
No 137
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=52.30 E-value=47 Score=28.59 Aligned_cols=78 Identities=10% Similarity=0.114 Sum_probs=43.6
Q ss_pred ceEEEEEeCCchh---HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCC--C-c---------
Q 024606 39 YKVAVLASKQEHC---LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE--N-E--------- 103 (265)
Q Consensus 39 ~rIav~~Sg~g~~---l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~--~-~--------- 103 (265)
|||+++..+.|.. +..|.+++.+. .++|. |+|..+. .......+.|++++.++... . .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~-v~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVR-WLGTADR----MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEE-EEECTTS----THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEE-EEecCCc----chhhhccccCCceEEecCCccCcCccHHHHHHHH
Confidence 8999997665432 23666666542 47776 4554321 12344556799887665321 0 0
Q ss_pred ----hHHHHHHHhh--CCCEEEEEec
Q 024606 104 ----REEELLELVQ--NTDFLVLARY 123 (265)
Q Consensus 104 ----~~~~l~~~l~--~~D~vv~ag~ 123 (265)
.-..+.+.++ ++|+|++.+.
T Consensus 80 ~~~~~~~~l~~~l~~~~pDvv~~~~~ 105 (364)
T 1f0k_A 80 RIFNAWRQARAIMKAYKPDVVLGMGG 105 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 0123344454 7999987653
No 138
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=52.04 E-value=65 Score=27.26 Aligned_cols=116 Identities=12% Similarity=0.058 Sum_probs=62.7
Q ss_pred CCCceEEEEEeCCchhHHHH---HHHHHcCCCCceEEEEeeCCCCCCC---cHHHHHHHHcCCCEEEECCCCCchHHHHH
Q 024606 36 DPKYKVAVLASKQEHCLVDF---LYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELL 109 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~~l~~l---l~~~~~~~l~~~I~~Vit~~~~~~~---~~v~~~a~~~gIP~~~~~~~~~~~~~~l~ 109 (265)
.+..||+|...++....+++ .+..+.. +.++..+-...+.... ..+.+.++++|+++...-.. +.-.+++.
T Consensus 168 ~~~~~Ilv~~d~s~~s~~al~~a~~la~~~--~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-g~~~~~I~ 244 (294)
T 3loq_A 168 SLFDRVLVAYDFSKWADRALEYAKFVVKKT--GGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIES-GTPHKAIL 244 (294)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHHHHHH--TCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC-SCHHHHHH
T ss_pred ccCCEEEEEECCCHHHHHHHHHHHHHhhhc--CCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEec-CCHHHHHH
Confidence 34568888776654332222 2211111 3455544433321111 23566778899996543222 23356777
Q ss_pred HHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCC
Q 024606 110 ELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHG 175 (265)
Q Consensus 110 ~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHps 175 (265)
+..+ ++|++|+..+++- .+.=.+.+=....++...+..++-+|+.
T Consensus 245 ~~a~~~~~dLlV~G~~~~~---------------------~~~~~~~Gs~~~~vl~~~~~pvLvv~~~ 291 (294)
T 3loq_A 245 AKREEINATTIFMGSRGAG---------------------SVMTMILGSTSESVIRRSPVPVFVCKRG 291 (294)
T ss_dssp HHHHHTTCSEEEEECCCCS---------------------CHHHHHHHCHHHHHHHHCSSCEEEECSC
T ss_pred HHHHhcCcCEEEEeCCCCC---------------------CccceeeCcHHHHHHhcCCCCEEEECCC
Confidence 7776 7999999888760 0000111133567777778888888775
No 139
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=51.86 E-value=26 Score=32.55 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=38.2
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHH---HcCCCE-EEECCCCCchHHHHHHH
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE---RHGIPY-HYLCAKENEREEELLEL 111 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~---~~gIP~-~~~~~~~~~~~~~l~~~ 111 (265)
+++||+|+|.|. |.. .+.++..- ..+++++|+... .....++++ ++|+|- ..+... ++.+.++
T Consensus 19 ~~~rvgiIG~G~~g~~---h~~~l~~~-~~~~lvav~d~~----~~~~~~~a~~~~~~g~~~~~~~~~~----~~~~~~l 86 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQT---HVENMARR-DDVEIVAFADPD----PYMVGRAQEILKKNGKKPAKVFGNG----NDDYKNM 86 (444)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHTC-TTEEEEEEECSC----HHHHHHHHHHHHHTTCCCCEEECSS----TTTHHHH
T ss_pred CCceEEEEecCHHHHH---HHHHHHhC-CCcEEEEEEeCC----HHHHHHHHHHHHhcCCCCCceeccC----CCCHHHH
Confidence 468999998875 222 22333321 147888877543 122344444 568752 222210 0123345
Q ss_pred hh--CCCEEEEEe
Q 024606 112 VQ--NTDFLVLAR 122 (265)
Q Consensus 112 l~--~~D~vv~ag 122 (265)
+. ++|+|+++.
T Consensus 87 l~~~~vD~V~i~t 99 (444)
T 2ixa_A 87 LKDKNIDAVFVSS 99 (444)
T ss_dssp TTCTTCCEEEECC
T ss_pred hcCCCCCEEEEcC
Confidence 54 578888765
No 140
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=51.71 E-value=30 Score=30.97 Aligned_cols=63 Identities=22% Similarity=0.288 Sum_probs=36.3
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
+||+|+|.|. |+.+...+.. .| ++|. +.++. .....+.+++.|+.+. + +.+.++++|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~--~G---~~V~--~~~~~---~~~~~~~a~~~G~~~~--~---------~~e~~~~aDv 75 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKD--SG---VDVT--VGLRS---GSATVAKAEAHGLKVA--D---------VKTAVAAADV 75 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECCT---TCHHHHHHHHTTCEEE--C---------HHHHHHTCSE
T ss_pred CEEEEECchHHHHHHHHHHHH--Cc---CEEE--EEECC---hHHHHHHHHHCCCEEc--c---------HHHHHhcCCE
Confidence 6899999887 5444333322 23 4553 34442 2234577888887432 1 1234558999
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++-
T Consensus 76 Vilav 80 (338)
T 1np3_A 76 VMILT 80 (338)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99874
No 141
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=51.67 E-value=15 Score=32.59 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=20.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISN 74 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~ 74 (265)
++||+|+|.|. |.. ++.++.+. ...++++|+..
T Consensus 9 ~irv~IIG~G~iG~~---~~~~l~~~-~~~elvav~d~ 42 (304)
T 3bio_A 9 KIRAAIVGYGNIGRY---ALQALREA-PDFEIAGIVRR 42 (304)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECC
T ss_pred CCEEEEECChHHHHH---HHHHHhcC-CCCEEEEEEcC
Confidence 58999999875 332 33333321 14788887753
No 142
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=51.22 E-value=10 Score=27.46 Aligned_cols=43 Identities=23% Similarity=0.367 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHHHHHHHcCCCEEEECC
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~~~a~~~gIP~~~~~~ 99 (265)
...++++++|+ +.++ |++ .|-.++ ..+..+|+++|||++.++.
T Consensus 17 ~~v~kai~~gk--aklV-iiA-~D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 17 KQTVKALKRGS--VKEV-VVA-KDADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp HHHHHHHTTTC--EEEE-EEE-TTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHcCC--eeEE-EEe-CCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 45666676663 5554 333 322222 4578889999999998863
No 143
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=51.13 E-value=73 Score=28.48 Aligned_cols=51 Identities=18% Similarity=0.094 Sum_probs=31.3
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEE
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 95 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~ 95 (265)
|+||+|.|.|. --+.+++++.+. ...++++|.... ......+++..|++++
T Consensus 2 ~irVgIiG~G~--iG~~~~r~l~~~-~~~elvav~d~~----~~~~~~~~~~~g~~~~ 52 (334)
T 2czc_A 2 KVKVGVNGYGT--IGKRVAYAVTKQ-DDMELIGITKTK----PDFEAYRAKELGIPVY 52 (334)
T ss_dssp CEEEEEECCSH--HHHHHHHHHHTC-TTEEEEEEEESS----CSHHHHHHHHTTCCEE
T ss_pred CcEEEEEeEhH--HHHHHHHHHhcC-CCCEEEEEEcCC----HHHHHHHHHhcCcccc
Confidence 47999999854 223344443322 247888877642 2345677888888765
No 144
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=50.46 E-value=7.4 Score=36.51 Aligned_cols=24 Identities=17% Similarity=0.310 Sum_probs=17.5
Q ss_pred CCCCceEEEEEeCC-chhHHHHHHH
Q 024606 35 IDPKYKVAVLASKQ-EHCLVDFLYG 58 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~l~~ll~~ 58 (265)
.+++.||+|+|+|. |+.|..++..
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~ 55 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAE 55 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHH
Confidence 56678999999998 7777766543
No 145
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=50.46 E-value=23 Score=31.46 Aligned_cols=62 Identities=13% Similarity=0.089 Sum_probs=39.4
Q ss_pred CCCceEEEEEeCCc--hhHHHHHHHHHcCCCCce-EEEEeeCCCCCC-----CcHHHHHHHHcCCCEEEEC
Q 024606 36 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVE-ITCVISNHDRGP-----NSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 36 ~~~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~-I~~Vit~~~~~~-----~~~v~~~a~~~gIP~~~~~ 98 (265)
.+..||+|..||+. +.|..++..+. ..++.+ +.+|..++.-.. ...+.++|+++|||++.+.
T Consensus 22 ~~~~~vlva~SGG~DS~~Ll~ll~~~~-~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~ 91 (317)
T 1wy5_A 22 SGERRVLIAFSGGVDSVVLTDVLLKLK-NYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGK 91 (317)
T ss_dssp SSCCEEEEECCSSHHHHHHHHHHHHST-TTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCEEEEEecchHHHHHHHHHHHHHH-HHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 34568999999863 34445554432 123457 777776653221 1347889999999998765
No 146
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=50.31 E-value=29 Score=26.55 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=38.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
.+||+|+|+|. --..+...+... .++ +.|+ ++ ......++++++|+.+.... ++.+.+.++|+
T Consensus 21 ~~~v~iiG~G~--iG~~~a~~l~~~--g~~-v~v~-~r---~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGM--LASEIAPYFSYP--QYK-VTVA-GR---NIDHVRAFAEKYEYEYVLIN--------DIDSLIKNNDV 83 (144)
T ss_dssp CCEEEEECCSH--HHHHHGGGCCTT--TCE-EEEE-ES---CHHHHHHHHHHHTCEEEECS--------CHHHHHHTCSE
T ss_pred CCEEEEECCCH--HHHHHHHHHHhC--CCE-EEEE-cC---CHHHHHHHHHHhCCceEeec--------CHHHHhcCCCE
Confidence 57999999765 122333333221 356 3344 44 12345678888887654321 13345568999
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+.+-
T Consensus 84 vi~at 88 (144)
T 3oj0_A 84 IITAT 88 (144)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 98875
No 147
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.82 E-value=35 Score=27.03 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=37.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHc-CCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH---h
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL---V 112 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~-~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~---l 112 (265)
.++|+|+|.|. |..+...|.. . | ++|++ +... ..-.+.+++.|+.+...+. .+++.++. +
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g---~~V~v-id~~-----~~~~~~~~~~g~~~~~gd~----~~~~~l~~~~~~ 103 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYG---KISLG-IEIR-----EEAAQQHRSEGRNVISGDA----TDPDFWERILDT 103 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHC---SCEEE-EESC-----HHHHHHHHHTTCCEEECCT----TCHHHHHTBCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccC---CeEEE-EECC-----HHHHHHHHHCCCCEEEcCC----CCHHHHHhccCC
Confidence 56899998765 4444433332 2 3 45543 3322 1224556678988765332 12333333 3
Q ss_pred hCCCEEEEE
Q 024606 113 QNTDFLVLA 121 (265)
Q Consensus 113 ~~~D~vv~a 121 (265)
.++|++|++
T Consensus 104 ~~ad~vi~~ 112 (183)
T 3c85_A 104 GHVKLVLLA 112 (183)
T ss_dssp CCCCEEEEC
T ss_pred CCCCEEEEe
Confidence 479998875
No 148
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=49.76 E-value=47 Score=31.34 Aligned_cols=87 Identities=15% Similarity=0.195 Sum_probs=52.0
Q ss_pred CCCceEEEEEeCC--chhHHHHHHHHHcCCCCceEEEEee-CCCCCCCcHHHHHHHHcCCCEEEECCCCC---------c
Q 024606 36 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKEN---------E 103 (265)
Q Consensus 36 ~~~~rIav~~Sg~--g~~l~~ll~~~~~~~l~~~I~~Vit-~~~~~~~~~v~~~a~~~gIP~~~~~~~~~---------~ 103 (265)
++|+||++|||-+ |+.--+++... ++ .++|+++.. ++ .-.-+.+.|++++-.+..+..... .
T Consensus 19 ~~mk~i~ILGSTGSIGtqtLdVi~~~--pd-~f~V~aLaa~g~---nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~ 92 (398)
T 2y1e_A 19 DGRLRVVVLGSTGSIGTQALQVIADN--PD-RFEVVGLAAGGA---HLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYH 92 (398)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHC--TT-TEEEEEEEECSS---CHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEE
T ss_pred CCceEEEEEccCcHHHHHHHHHHHhC--CC-ceEEEEEEecCC---CHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEe
Confidence 4468899999954 55444555542 22 489999988 54 224467888888877766543110 0
Q ss_pred hHHHHHHHhh--CCCEEEEE--ecCCCCc
Q 024606 104 REEELLELVQ--NTDFLVLA--RYMQPVP 128 (265)
Q Consensus 104 ~~~~l~~~l~--~~D~vv~a--g~~~~ip 128 (265)
-++.+.+... ++|+|+.+ |+.-+.|
T Consensus 93 G~~~l~~~a~~~~~D~Vv~AIvG~aGL~P 121 (398)
T 2y1e_A 93 GSDAATRLVEQTEADVVLNALVGALGLRP 121 (398)
T ss_dssp STTHHHHHHHHSCCSEEEECCCSGGGHHH
T ss_pred cHHHHHHHhcCCCCCEEEEeCcCHHHHHH
Confidence 1234555554 68999854 4444333
No 149
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=49.57 E-value=1.2e+02 Score=26.11 Aligned_cols=91 Identities=10% Similarity=0.127 Sum_probs=50.1
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..++|+|+|.|. |..+...+.+. | ++|. +.++. ... .+.+++.|+.+.. . +++.+.++++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~--G---~~V~--~~dr~---~~~-~~~~~~~g~~~~~--~------~~l~~~l~~a 214 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL--G---AKVK--VGARE---SDL-LARIAEMGMEPFH--I------SKAAQELRDV 214 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--T---CEEE--EEESS---HHH-HHHHHHTTSEEEE--G------GGHHHHTTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--C---CEEE--EEECC---HHH-HHHHHHCCCeecC--h------hhHHHHhcCC
Confidence 347899999876 43333333332 3 4553 33431 111 2344566764321 1 1344556689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
|+|+++--.+ ++..+.++..+.+.+-+.-+-
T Consensus 215 DvVi~~~p~~------------------------------~i~~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 215 DVCINTIPAL------------------------------VVTANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp SEEEECCSSC------------------------------CBCHHHHHHSCTTCEEEECSS
T ss_pred CEEEECCChH------------------------------HhCHHHHHhcCCCCEEEEecC
Confidence 9999875322 777788887776654444444
No 150
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=49.40 E-value=53 Score=31.06 Aligned_cols=58 Identities=7% Similarity=0.082 Sum_probs=37.7
Q ss_pred CCCCceEEEEEeCC--chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 35 IDPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 35 ~~~~~rIav~~Sg~--g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
.+.++||+||||-+ |++--+++... ++ .++|+++..++ .-.-+.+.|++++-.+..+.
T Consensus 6 ~~~~k~i~ILGSTGSIGtqtLdVi~~~--pd-~f~V~aL~ag~---nv~~L~~q~~~f~p~~v~v~ 65 (406)
T 1q0q_A 6 HSGMKQLTILGSTGSIGCSTLDVVRHN--PE-HFRVVALVAGK---NVTRMVEQCLEFSPRYAVMD 65 (406)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHC--TT-TEEEEEEEESS---CHHHHHHHHHHHCCSEEEES
T ss_pred cCCceeEEEEccCcHHHHHHHHHHHhC--CC-ccEEEEEEcCC---CHHHHHHHHHHhCCCEEEEc
Confidence 56788999999954 55544555542 22 48999988865 22446778888887776654
No 151
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=48.86 E-value=38 Score=30.45 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=20.6
Q ss_pred CCCceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCC
Q 024606 36 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 36 ~~~~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
.+++||+|+|.|. |.. ....+... + .+++++|+...
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~--~--~~~l~av~d~~ 42 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSV--P--GLNLAFVASRD 42 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTS--T--TEEEEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhC--C--CeEEEEEEcCC
Confidence 4578999999976 322 22233221 2 47888877643
No 152
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=48.59 E-value=66 Score=27.48 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=37.9
Q ss_pred ceEEEEEe-CC-chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 39 YKVAVLAS-KQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 39 ~rIav~~S-g~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
+||+|.|. |. |.. .+.|++. | ++|.++.-+.. ......+.....|+.+...+- .+.+.+.+.++++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~l~R~~~--~~~~~~~~l~~~~v~~v~~Dl---~d~~~l~~a~~~~ 80 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL---G---HPTYVFTRPNS--SKTTLLDEFQSLGAIIVKGEL---DEHEKLVELMKKV 80 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT---T---CCEEEEECTTC--SCHHHHHHHHHTTCEEEECCT---TCHHHHHHHHTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHC---C---CcEEEEECCCC--chhhHHHHhhcCCCEEEEecC---CCHHHHHHHHcCC
Confidence 57888774 32 433 3444443 3 56765443321 111222222456777765442 1235667777789
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|.||.+.
T Consensus 81 d~vi~~a 87 (318)
T 2r6j_A 81 DVVISAL 87 (318)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9887654
No 153
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=48.35 E-value=29 Score=32.08 Aligned_cols=60 Identities=13% Similarity=0.034 Sum_probs=38.0
Q ss_pred CCCCceEEEEEeCCc-h-hHHHHHHHHHcCCCCceEEEEeeCCCCCC-----------CcHHHHHHHHcCCCEEEECC
Q 024606 35 IDPKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g-~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-----------~~~v~~~a~~~gIP~~~~~~ 99 (265)
+.+.+||+|..||+- | .+..++.. . ..+|.+|..+.-... -..+.++|++.|||++.++-
T Consensus 14 ~~~~~kVvVa~SGGvDSsv~a~lL~~--~---G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~ 86 (380)
T 2der_A 14 SETAKKVIVGMSGGVDSSVSAWLLQQ--Q---GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF 86 (380)
T ss_dssp ---CCEEEEECCSCSTTHHHHHHHHT--T---CCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCEEEEEEEChHHHHHHHHHHHH--c---CCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 445689999999863 3 34444443 2 378888877542111 12467889999999988763
No 154
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=48.14 E-value=25 Score=28.23 Aligned_cols=82 Identities=13% Similarity=0.083 Sum_probs=44.7
Q ss_pred CceEEEEEeCCc--hh-HHHHHHHHHcC-CC--CceEEEEeeCC---CCCCCcHHHHHHHHcCCCEEEECCCCCchHHHH
Q 024606 38 KYKVAVLASKQE--HC-LVDFLYGWQEG-KL--PVEITCVISNH---DRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 108 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~-l~~ll~~~~~~-~l--~~~I~~Vit~~---~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l 108 (265)
|+||.|+.+|+- |. .++++...... .+ ..+|.--=|.. ..+.+....+.++++||++.....+ ... +
T Consensus 1 m~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar-~l~-~-- 76 (156)
T 2gi4_A 1 MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSK-KLT-Q-- 76 (156)
T ss_dssp CCEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCC-BCC-H--
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccc-cCC-H--
Confidence 358999998874 33 44566553221 11 13333222221 2335667889999999997532111 111 1
Q ss_pred HHHhhCCCEEEEEecC
Q 024606 109 LELVQNTDFLVLARYM 124 (265)
Q Consensus 109 ~~~l~~~D~vv~ag~~ 124 (265)
+.+.++|+|+...-.
T Consensus 77 -~d~~~~DlIi~Md~~ 91 (156)
T 2gi4_A 77 -KLCDESDFLITMDNS 91 (156)
T ss_dssp -HHHTTCSEEECCCHH
T ss_pred -HHhccCCEEEEECCh
Confidence 123479999977643
No 155
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=47.44 E-value=1.2e+02 Score=26.00 Aligned_cols=82 Identities=13% Similarity=0.173 Sum_probs=40.8
Q ss_pred CCceEEEEEeCCc--hhHHHHHHHHHcCCCC-ceEEEEeeCCCCCCCcHHHHHHHHcCCCE-EEECC--C-CCc-h----
Q 024606 37 PKYKVAVLASKQE--HCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCA--K-ENE-R---- 104 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~l~~ll~~~~~~~l~-~~I~~Vit~~~~~~~~~v~~~a~~~gIP~-~~~~~--~-~~~-~---- 104 (265)
++|||++++...+ .....+++.+.+. -. +++..+++... .....+..+..|++. ..+.. . ... .
T Consensus 7 ~~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQH---RQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTR 82 (375)
T ss_dssp SCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSS---SHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHH
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCC---HHHHHHHHHHcCCCCccccccCCCcccHHHHHHH
Confidence 3589998874322 1345666666542 12 56655555431 112233445577765 22221 1 110 0
Q ss_pred -HHHHHHHhh--CCCEEEEEe
Q 024606 105 -EEELLELVQ--NTDFLVLAR 122 (265)
Q Consensus 105 -~~~l~~~l~--~~D~vv~ag 122 (265)
-..+.+.++ +||+|++.+
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~ 103 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHG 103 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEEeC
Confidence 112444554 899998854
No 156
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=47.36 E-value=34 Score=27.60 Aligned_cols=83 Identities=12% Similarity=0.129 Sum_probs=45.4
Q ss_pred CCceEEEEEeCCc--hh-HHHHHHHHHcC-CCC--ceEEEEeeCC---CCCCCcHHHHHHHHcCCCEEEECCCCCchHHH
Q 024606 37 PKYKVAVLASKQE--HC-LVDFLYGWQEG-KLP--VEITCVISNH---DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~-l~~ll~~~~~~-~l~--~~I~~Vit~~---~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
.++||.|+.+|+- |. .++++...... .+. .+|.--=|.. ..+.+....+.++++||++ .... .... ++
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~a-r~l~-~~ 80 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SHVA-RQIT-KE 80 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CCCC-CBCC-HH
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CCce-eECC-HH
Confidence 3689999999874 33 34566553321 121 3332222222 2234566889999999997 3111 1111 22
Q ss_pred HHHHhhCCCEEEEEecCC
Q 024606 108 LLELVQNTDFLVLARYMQ 125 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~ 125 (265)
.+.++|+|+...-.+
T Consensus 81 ---~~~~~DlIi~M~~~n 95 (157)
T 3n8i_A 81 ---DFATFDYILCMDESN 95 (157)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HcCCCCEEEEeCcHH
Confidence 233789999876544
No 157
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=46.89 E-value=78 Score=28.86 Aligned_cols=163 Identities=13% Similarity=0.149 Sum_probs=82.3
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCce-EEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVE-ITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~-I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.++|+|+|.|. |..+...+.++ ..+ |. +.++.. . . .+.+++.|+. .+. ++.++++++
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~-----G~~~V~--~~d~~~--~-~-~~~~~~~g~~--~~~--------~l~ell~~a 222 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF-----NPKELL--YYDYQA--L-P-KDAEEKVGAR--RVE--------NIEELVAQA 222 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-----CCSEEE--EECSSC--C-C-HHHHHHTTEE--ECS--------SHHHHHHTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-----CCcEEE--EECCCc--c-c-hhHHHhcCcE--ecC--------CHHHHHhcC
Confidence 47899999877 54444444432 354 53 333321 1 1 3456677743 211 133456689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHH
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFD 191 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~ 191 (265)
|+|+++- |+.+ ...+++..+.++..+.+.+-+--| ||. ..+..|+.
T Consensus 223 DvV~l~~-----P~t~--------------------~t~~li~~~~l~~mk~ga~lIn~a-----rG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 223 DIVTVNA-----PLHA--------------------GTKGLINKELLSKFKKGAWLVNTA-----RGAICVAEDVAAALE 272 (364)
T ss_dssp SEEEECC-----CCST--------------------TTTTCBCHHHHTTSCTTEEEEECS-----CGGGBCHHHHHHHHH
T ss_pred CEEEECC-----CCCh--------------------HHHHHhCHHHHhhCCCCCEEEECC-----CCchhCHHHHHHHHH
Confidence 9998864 2111 123478888888887765444334 553 35677787
Q ss_pred hCCC-EeEEEEEEecCccCCCCeeEE--E---EEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 192 AGVK-LIGATSHFVTEELDAGPIIEQ--M---VERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 192 ~G~~-~~GvTvH~v~~~~D~G~II~Q--~---~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
+|.- ..|.-|+.-..-...-+.+.. . .+-+.|.-...+...+ ....+.+.+.+..+.+|+
T Consensus 273 ~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~--~~~~~~~~~nl~~~~~g~ 338 (364)
T 2j6i_A 273 SGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQ--TRYAQGTVNILESFFTGK 338 (364)
T ss_dssp HTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHH--HHHHHHHHHHHHHHHTTC
T ss_pred cCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHH--HHHHHHHHHHHHHHHcCC
Confidence 8752 233444433322222233322 2 3445554322222221 112234566666777776
No 158
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=46.66 E-value=26 Score=27.85 Aligned_cols=81 Identities=15% Similarity=0.116 Sum_probs=46.2
Q ss_pred CceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
++||.|+.+|+- |. .++++..... .+.+.=+++-.....+.+....+.++++||++.....+ ... ++ .+.+
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~~-~~~v~SAGt~~~~g~~~~p~a~~~l~e~Gid~~~~~ar-~l~-~~---~~~~ 81 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLLP-SKKINSAGVGALVDHTADESAIRVAEKNGLCLKGHRGT-KFT-SA---LARQ 81 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCT-TSEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCC-BCC-HH---HHTT
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhcC-CCEEEeccccCCCCCCCCHHHHHHHHHcCCCccCCccc-CCC-HH---Hhcc
Confidence 458999999884 33 4567766533 22222233322222345667899999999997421111 111 11 2347
Q ss_pred CCEEEEEecC
Q 024606 115 TDFLVLARYM 124 (265)
Q Consensus 115 ~D~vv~ag~~ 124 (265)
+|+|+...-.
T Consensus 82 ~DlIi~m~~~ 91 (150)
T 2wmy_A 82 YDLLLVMEYS 91 (150)
T ss_dssp CSEEEESCHH
T ss_pred CCEEEEcCHH
Confidence 9999987644
No 159
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=46.18 E-value=22 Score=33.54 Aligned_cols=71 Identities=21% Similarity=0.319 Sum_probs=40.9
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~-- 113 (265)
..|||.|+|.|. |..+...|.. + .++|+ || .++ ...+.+..+++++.+..-+. .+.++++...
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~--~---~~~v~-vI-d~d---~~~~~~~~~~~~~~~i~Gd~----~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG--E---NNDIT-IV-DKD---GDRLRELQDKYDLRVVNGHA----SHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS--T---TEEEE-EE-ESC---HHHHHHHHHHSSCEEEESCT----TCHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHH--C---CCCEE-EE-ECC---HHHHHHHHHhcCcEEEEEcC----CCHHHHHhcCCC
Confidence 359999999887 5555444322 1 36775 33 331 12345566778988875321 2344554443
Q ss_pred CCCEEEEE
Q 024606 114 NTDFLVLA 121 (265)
Q Consensus 114 ~~D~vv~a 121 (265)
++|+++.+
T Consensus 68 ~ad~~ia~ 75 (461)
T 4g65_A 68 DADMLVAV 75 (461)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEE
Confidence 78887754
No 160
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=45.94 E-value=45 Score=29.37 Aligned_cols=94 Identities=10% Similarity=0.188 Sum_probs=50.3
Q ss_pred hhHhhhHhhhccccccccCCCCCCceEEEEEeCCc-hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCC
Q 024606 15 DFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI 92 (265)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~rIav~~Sg~g-~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gI 92 (265)
+|+.+-++|...... ...+..+|.|++.|.+ .+ ...+++++... .++. ||+.+..+....+.+.+++++
T Consensus 138 ~Y~~lR~eF~~~~~~----~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~~---~~i~-vv~G~~~~~~~~l~~~~~~~~- 208 (282)
T 3hbm_A 138 SYALIREEFYQEAKE----NRKKKYDFFICMGGTDIKNLSLQIASELPKT---KIIS-IATSSSNPNLKKLQKFAKLHN- 208 (282)
T ss_dssp GGCCCCHHHHHHTTC----CCCCCEEEEEECCSCCTTCHHHHHHHHSCTT---SCEE-EEECTTCTTHHHHHHHHHTCS-
T ss_pred cccccCHHHHHhhhh----ccccCCeEEEEECCCchhhHHHHHHHHhhcC---CCEE-EEECCCchHHHHHHHHHhhCC-
Confidence 567777777542211 1223567776655543 34 34677776432 2444 555553222233555555443
Q ss_pred CEEEECCCCCchHHHHHHHhhCCCEEEEEe
Q 024606 93 PYHYLCAKENEREEELLELVQNTDFLVLAR 122 (265)
Q Consensus 93 P~~~~~~~~~~~~~~l~~~l~~~D~vv~ag 122 (265)
.+...+.. +++.+++..+|++|++|
T Consensus 209 ~v~v~~~~-----~~m~~~m~~aDlvI~~g 233 (282)
T 3hbm_A 209 NIRLFIDH-----ENIAKLMNESNKLIISA 233 (282)
T ss_dssp SEEEEESC-----SCHHHHHHTEEEEEEES
T ss_pred CEEEEeCH-----HHHHHHHHHCCEEEECC
Confidence 44443321 24667777999999976
No 161
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=45.90 E-value=42 Score=25.12 Aligned_cols=41 Identities=22% Similarity=0.359 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCE--EEECCCCCchHHHHHHHhh--CCCEEEEEecCC
Q 024606 83 VIRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYMQ 125 (265)
Q Consensus 83 v~~~a~~~gIP~--~~~~~~~~~~~~~l~~~l~--~~D~vv~ag~~~ 125 (265)
+.++++++|++. ..+. ...-.+++.+..+ ++|++|+...++
T Consensus 76 l~~~~~~~~~~~~~~~~~--~g~~~~~I~~~a~~~~~dliV~G~~~~ 120 (150)
T 3tnj_A 76 LSQIGNTLGIDPAHRWLV--WGEPREEIIRIAEQENVDLIVVGSHGR 120 (150)
T ss_dssp HHHHHHHHTCCGGGEEEE--ESCHHHHHHHHHHHTTCSEEEEEEC--
T ss_pred HHHHHHHcCCCcceEEEe--cCCHHHHHHHHHHHcCCCEEEEecCCC
Confidence 456677788883 2211 1223467777776 899999876654
No 162
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=45.07 E-value=98 Score=27.61 Aligned_cols=157 Identities=15% Similarity=0.196 Sum_probs=80.8
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.+. | .+|. +.++.. .. +.+.+.|+.+ . ++.+.++++|
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~--G---~~V~--~~d~~~---~~--~~~~~~g~~~---~--------~l~~~l~~aD 206 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF--N---MRIL--YYSRTR---KE--EVERELNAEF---K--------PLEDLLRESD 206 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--T---CEEE--EECSSC---CH--HHHHHHCCEE---C--------CHHHHHHHCS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--C---CEEE--EECCCc---ch--hhHhhcCccc---C--------CHHHHHhhCC
Confidence 47899999887 55444444432 3 5653 334321 12 4455667632 1 1234556899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++--.. + -.++++..++++..+.+.+-+.-| ||. ..+..++.+
T Consensus 207 vVil~vp~~-----~--------------------~t~~~i~~~~~~~mk~~ailIn~s-----rg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 207 FVVLAVPLT-----R--------------------ETYHLINEERLKLMKKTAILINIA-----RGKVVDTNALVKALKE 256 (334)
T ss_dssp EEEECCCCC-----T--------------------TTTTCBCHHHHHHSCTTCEEEECS-----CGGGBCHHHHHHHHHH
T ss_pred EEEECCCCC-----h--------------------HHHHhhCHHHHhcCCCCcEEEECC-----CCcccCHHHHHHHHHh
Confidence 998864221 0 122377777787777665555555 563 235667777
Q ss_pred CCCEeEEEEEEecCccC-CCCeeEEEEEecCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKLIGATSHFVTEELD-AGPIIEQMVERVSHR---DNLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~~GvTvH~v~~~~D-~G~II~Q~~~~I~~~---dt~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
| ...|+-++....+-. .-+.+.-..+-+.|. .|.+.. .+ ..+.+.+.+..+.+|+
T Consensus 257 ~-~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~-~~----~~~~~~~n~~~~~~g~ 315 (334)
T 2dbq_A 257 G-WIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAR-EG----MAELVAKNLIAFKRGE 315 (334)
T ss_dssp T-SSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHH-HH----HHHHHHHHHHHHHTTC
T ss_pred C-CeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHH-HH----HHHHHHHHHHHHHcCC
Confidence 5 345666665554321 112222223334433 343332 22 2344555666666664
No 163
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=44.79 E-value=1.2e+02 Score=27.04 Aligned_cols=103 Identities=15% Similarity=0.217 Sum_probs=58.8
Q ss_pred CceEEEEEeCC-c-hhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g-~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..+++|+|+|. + +.++++.+.. + ..+| .+.++. ....-..++.+++|+++..+ . +.+.++++
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~--~--~~~V--~v~~r~-~a~~la~~l~~~~g~~~~~~-~--------~~eav~~a 184 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARF--A--LEAI--LVHDPY-ASPEILERIGRRCGVPARMA-A--------PADIAAQA 184 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHS--C--CCEE--EEECTT-CCHHHHHHHHHHHTSCEEEC-C--------HHHHHHHC
T ss_pred CcEEEEECccHHHHHHHHHHHHhC--C--CcEE--EEECCc-HHHHHHHHHHHhcCCeEEEe-C--------HHHHHhhC
Confidence 47899999886 2 3445554421 1 1344 355664 21111223333468887653 1 23445689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCcHH
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 186 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~pi 186 (265)
|+|+++--.. -| ++..+.++ ++..|+-..|.-|.-|=..+-
T Consensus 185 DIVi~aT~s~-~p---------------------------vl~~~~l~--~G~~V~~vGs~~p~~~El~~~ 225 (313)
T 3hdj_A 185 DIVVTATRST-TP---------------------------LFAGQALR--AGAFVGAIGSSLPHTRELDDE 225 (313)
T ss_dssp SEEEECCCCS-SC---------------------------SSCGGGCC--TTCEEEECCCSSTTCCCCCHH
T ss_pred CEEEEccCCC-Cc---------------------------ccCHHHcC--CCcEEEECCCCCCchhhcCHH
Confidence 9999886432 12 55544443 456888888888887776654
No 164
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=44.42 E-value=1.2e+02 Score=27.02 Aligned_cols=156 Identities=15% Similarity=0.181 Sum_probs=81.1
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.+. | .+|. +.++.. . . +.+.+.|+.. . ++.+.++++|
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~--G---~~V~--~~d~~~--~-~--~~~~~~g~~~---~--------~l~e~l~~aD 202 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPF--G---VKLY--YWSRHR--K-V--NVEKELKARY---M--------DIDELLEKSD 202 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG--T---CEEE--EECSSC--C-H--HHHHHHTEEE---C--------CHHHHHHHCS
T ss_pred cCEEEEEccCHHHHHHHHHHHHC--C---CEEE--EECCCc--c-h--hhhhhcCcee---c--------CHHHHHhhCC
Confidence 47899999887 55444444332 3 5653 334421 1 1 4455666521 1 1234455899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCc----HHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK----PAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~----pi~~ai~~ 192 (265)
+|+++--.. -...+++..++++..+.+ +-+.-| ||.- .+..++.+
T Consensus 203 iVil~vp~~-------------------------~~t~~~i~~~~~~~mk~g-ilin~s-----rg~~vd~~aL~~aL~~ 251 (333)
T 2d0i_A 203 IVILALPLT-------------------------RDTYHIINEERVKKLEGK-YLVNIG-----RGALVDEKAVTEAIKQ 251 (333)
T ss_dssp EEEECCCCC-------------------------TTTTTSBCHHHHHHTBTC-EEEECS-----CGGGBCHHHHHHHHHT
T ss_pred EEEEcCCCC-------------------------hHHHHHhCHHHHhhCCCC-EEEECC-----CCcccCHHHHHHHHHc
Confidence 998864221 012337777777777666 556666 6643 24566766
Q ss_pred CCCEeEEEEEEecCcc-CCCCeeEEE-EEecCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKLIGATSHFVTEEL-DAGPIIEQM-VERVSHR---DNLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~~GvTvH~v~~~~-D~G~II~Q~-~~~I~~~---dt~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
| ...|+-++....+- ..-+++... .+-+.|. .|.+.. .++ .+.+.+.+..+.+|+
T Consensus 252 ~-~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~-~~~----~~~~~~n~~~~~~g~ 311 (333)
T 2d0i_A 252 G-KLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQ-EDV----GFRAVENLLKVLRGE 311 (333)
T ss_dssp T-CBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHH-HHH----HHHHHHHHHHHHTTC
T ss_pred C-CceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHH-HHH----HHHHHHHHHHHHcCC
Confidence 6 34556666655332 122333333 3444443 344332 222 344555666666664
No 165
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=43.92 E-value=29 Score=26.83 Aligned_cols=53 Identities=21% Similarity=0.334 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC--CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP--NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~--~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
...++++++|+ +.++ |+++.-++. -..+..+|+++|||++.++.+ .+|=+++.
T Consensus 26 ~~v~kai~~gk--akLV-iiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~g 80 (121)
T 2lbw_A 26 KEVVKALRKGE--KGLV-VIAGDIWPADVISHIPVLCEDHSVPYIFIPSK-----QDLGAAGA 80 (121)
T ss_dssp HHHHHHHHHSC--CCEE-EECTTCSCTTHHHHHHHHHHHTCCCEEECCCH-----HHHHHHHT
T ss_pred HHHHHHHHcCC--ceEE-EEeCCCCHHHHHHHHHHHHHhcCCcEEEECCH-----HHHHHHhC
Confidence 44556666664 5554 333322221 245778999999999887532 35555553
No 166
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=43.85 E-value=81 Score=28.62 Aligned_cols=159 Identities=12% Similarity=0.131 Sum_probs=82.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.+. ..+|. +.++... . ..+++.|+.. +. ++.++++++|
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~-----G~~V~--~~d~~~~--~---~~~~~~g~~~--~~--------~l~ell~~aD 225 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF-----GFNVL--FYDPYLS--D---GVERALGLQR--VS--------TLQDLLFHSD 225 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TCEEE--EECTTSC--T---THHHHHTCEE--CS--------SHHHHHHHCS
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-----CCEEE--EECCCcc--h---hhHhhcCCee--cC--------CHHHHHhcCC
Confidence 47899999887 55444444432 35653 3344211 1 2345567632 11 1334555899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++--.. -...+++..+.++..+.+.+-+.-| ||. ..+..++.+
T Consensus 226 vV~l~~P~t-------------------------~~t~~li~~~~l~~mk~gailIN~a-----rg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 226 CVTLHCGLN-------------------------EHNHHLINDFTVKQMRQGAFLVNTA-----RGGLVDEKALAQALKE 275 (347)
T ss_dssp EEEECCCCC-------------------------TTCTTSBSHHHHTTSCTTEEEEECS-----CTTSBCHHHHHHHHHH
T ss_pred EEEEcCCCC-------------------------HHHHHHhHHHHHhcCCCCCEEEECC-----CChHHhHHHHHHHHHh
Confidence 998763211 1123378888888888776555555 553 346677777
Q ss_pred CCCEeEE--EEEEecCcc-CCCCeeEEEEEecCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKLIGA--TSHFVTEEL-DAGPIIEQMVERVSHRD--NLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~~Gv--TvH~v~~~~-D~G~II~Q~~~~I~~~d--t~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|. ..|+ -++....-. +.++......+-+.|.. ..++..+++.+ ...+.+..+.+|+
T Consensus 276 g~-i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~----~~~~ni~~~~~g~ 336 (347)
T 1mx3_A 276 GR-IRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMRE----EAAREIRRAITGR 336 (347)
T ss_dssp TS-EEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHH----HHHHHHHHHHHSC
T ss_pred CC-CcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHH----HHHHHHHHHHcCC
Confidence 64 3344 333322222 23455544445555543 23444444443 3344555556674
No 167
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=43.77 E-value=23 Score=33.38 Aligned_cols=62 Identities=15% Similarity=0.085 Sum_probs=40.6
Q ss_pred CCCceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCC-C-----CcHHHHHHHHcCCCEEEEC
Q 024606 36 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-P-----NSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 36 ~~~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~-~-----~~~v~~~a~~~gIP~~~~~ 98 (265)
.+..||+|..||+. ++|..++..+.. ..+.++.+|..++.-. . ...+.++|+++|||++...
T Consensus 16 ~~~~~vlVa~SGG~DS~~Ll~ll~~~~~-~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~ 85 (464)
T 3a2k_A 16 SEGAAVIVGVSGGPDSLALLHVFLSLRD-EWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQ 85 (464)
T ss_dssp SCSSBEEEECCSSHHHHHHHHHHHHHHH-TTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEEcCcHHHHHHHHHHHHHHH-HcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEE
Confidence 34568999999863 355555554332 1246777777776422 1 1347899999999998765
No 168
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=43.55 E-value=24 Score=31.06 Aligned_cols=67 Identities=16% Similarity=0.149 Sum_probs=35.9
Q ss_pred CCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 35 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
...+|||+|+|.|. |..+...+.. .| ++|. +.+++ ... .+.+.+.|+... . ...+.++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~--~G---~~V~--~~dr~---~~~-~~~l~~~g~~~~--~--------~~~~~~~ 76 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLK--NG---FKVT--VWNRT---LSK-CDELVEHGASVC--E--------SPAEVIK 76 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSS---GGG-GHHHHHTTCEEC--S--------SHHHHHH
T ss_pred cccCCEEEEECccHHHHHHHHHHHH--CC---CeEE--EEeCC---HHH-HHHHHHCCCeEc--C--------CHHHHHH
Confidence 34468999999887 5554433322 23 4654 33442 122 333446676421 1 1223445
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++-
T Consensus 77 ~aDvvi~~v 85 (310)
T 3doj_A 77 KCKYTIAML 85 (310)
T ss_dssp HCSEEEECC
T ss_pred hCCEEEEEc
Confidence 789998764
No 169
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=43.33 E-value=78 Score=27.46 Aligned_cols=36 Identities=6% Similarity=0.045 Sum_probs=21.5
Q ss_pred CCCCceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCC
Q 024606 35 IDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
..+++||+|+|.|. |.. +..+.+. + ..++++|+...
T Consensus 7 ~~~~~~igiIG~G~~g~~~~~~l~~~---~--~~~~v~v~d~~ 44 (315)
T 3c1a_A 7 NNSPVRLALIGAGRWGKNYIRTIAGL---P--GAALVRLASSN 44 (315)
T ss_dssp --CCEEEEEEECTTTTTTHHHHHHHC---T--TEEEEEEEESC
T ss_pred CCCcceEEEECCcHHHHHHHHHHHhC---C--CcEEEEEEeCC
Confidence 45679999999987 433 3333221 2 37888777643
No 170
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=43.20 E-value=57 Score=26.49 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=34.8
Q ss_pred ceEEEEEeCCc-h-hHHHHHHHHHcCCCCceEEEEeeCCCCCCC---cHHHHHHHHcCCCEEEECC
Q 024606 39 YKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 39 ~rIav~~Sg~g-~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~---~~v~~~a~~~gIP~~~~~~ 99 (265)
.||++..||+- | .+..++.. .+ .++.+|..+...... ..+.++|++.|||.+.++-
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~--~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~ 64 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALK--EF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDM 64 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEEccCcHHHHHHHHHHHH--cC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeC
Confidence 58999999863 3 33444433 23 467666555432111 3467888999999987753
No 171
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=43.19 E-value=34 Score=27.97 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=46.0
Q ss_pred CceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
++||.|+.+|+- |. .++++..... ++.+.=+++-.....+.+....+.++++||++.....+ ... ++ .+.+
T Consensus 22 m~~VLFVCtgN~cRSpmAEal~r~~~~-~~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr-~l~-~~---~~~~ 95 (167)
T 2fek_A 22 FNNILVVCVGNICRSPTAERLLQRYHP-ELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCAR-QIS-RR---LCRN 95 (167)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCT-TCEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCC-BCC-HH---HHHH
T ss_pred cCeEEEEcCCcHHHHHHHHHHHHHhcC-CeEEEeeecCCCCCCCCCHHHHHHHHHcCCCccCCcCc-cCC-HH---Hhcc
Confidence 459999999884 33 4567766533 22222233322222345667889999999997421111 111 22 2336
Q ss_pred CCEEEEEecC
Q 024606 115 TDFLVLARYM 124 (265)
Q Consensus 115 ~D~vv~ag~~ 124 (265)
+|+|+...-.
T Consensus 96 ~DlIitM~~~ 105 (167)
T 2fek_A 96 YDLILTMEKR 105 (167)
T ss_dssp SSEEEESCHH
T ss_pred CCEEEEcCHH
Confidence 8999987643
No 172
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=43.15 E-value=21 Score=32.39 Aligned_cols=84 Identities=21% Similarity=0.235 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCCEEEECCCCC-c------hHHHHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccc-
Q 024606 82 HVIRFLERHGIPYHYLCAKEN-E------REEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF- 153 (265)
Q Consensus 82 ~v~~~a~~~gIP~~~~~~~~~-~------~~~~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~- 153 (265)
+....+...|+.+..+..+.- . ...++.+.++++|+|..-.+.+ +.++-.....-|+
T Consensus 164 Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~---------------er~~~~~~~~~~~~ 228 (304)
T 3r7f_A 164 SNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQN---------------ERHQSAVSQEGYLN 228 (304)
T ss_dssp HHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCT---------------TTCCSSCCSTTHHH
T ss_pred HHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchh---------------hccccchhHHHHhC
Confidence 456667778887766543210 0 0113445666899998766543 1111011122233
Q ss_pred cccCChhHHhhcCCCeEEecCCCCCCCCC
Q 024606 154 NMILSGKFLRSYGKDVINIHHGLLPSFKG 182 (265)
Q Consensus 154 ~~il~~~il~~~~~~~iNiHpslLP~yRG 182 (265)
.|.+..++++..+..++-+||. |.+||
T Consensus 229 ~y~v~~~~l~~a~~~ai~mHcl--P~~Rg 255 (304)
T 3r7f_A 229 KYGLTVERAERMKRHAIIMHPA--PVNRG 255 (304)
T ss_dssp HHSBCHHHHTTSCTTCEEECCS--CCCBT
T ss_pred CCccCHHHHhhcCCCCEEECCC--CCCCC
Confidence 5789999999988899999995 68887
No 173
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=42.91 E-value=56 Score=25.07 Aligned_cols=73 Identities=8% Similarity=-0.005 Sum_probs=35.4
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHH--HcCCCEEEECCCCCchHHHHHHH-hh
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE--RHGIPYHYLCAKENEREEELLEL-VQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~--~~gIP~~~~~~~~~~~~~~l~~~-l~ 113 (265)
+.+|+|+|.|. |..+...|.. .| ++++++-.+. ........+ ..|+.+...+. .+.+.+.+. +.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g---~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~---~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RG---QNVTVISNLP----EDDIKQLEQRLGDNADVIPGDS---NDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCC----HHHHHHHHHHHCTTCEEEESCT---TSHHHHHHHTTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCC---CCHHHHHHcChh
Confidence 36799998655 4333333322 23 5665433221 111122222 34787765332 222333333 45
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+++++-
T Consensus 71 ~ad~vi~~~ 79 (153)
T 1id1_A 71 RCRAILALS 79 (153)
T ss_dssp TCSEEEECS
T ss_pred hCCEEEEec
Confidence 899988763
No 174
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=42.78 E-value=24 Score=30.16 Aligned_cols=18 Identities=6% Similarity=-0.047 Sum_probs=11.9
Q ss_pred CCceEEEEEeCC-chhHHH
Q 024606 37 PKYKVAVLASKQ-EHCLVD 54 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ 54 (265)
.+|||+|+|.|. |+.+..
T Consensus 2 ~~m~i~iiG~G~~G~~~a~ 20 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAI 20 (295)
T ss_dssp --CEEEECCCSTTHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHH
Confidence 357999999887 554443
No 175
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=42.30 E-value=79 Score=30.32 Aligned_cols=88 Identities=15% Similarity=0.131 Sum_probs=52.9
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..++|+|+|.|. |..+...+.++ | ++| ++++++ ..-...+...|+.+ . ++.+.++++
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~--G---~~V--iv~d~~----~~~~~~a~~~g~~~---~--------~l~ell~~a 313 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGL--G---ARV--YITEID----PICAIQAVMEGFNV---V--------TLDEIVDKG 313 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHH--T---CEE--EEECSC----HHHHHHHHTTTCEE---C--------CHHHHTTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--c---CEE--EEEeCC----hhhHHHHHHcCCEe---c--------CHHHHHhcC
Confidence 347899998876 55554445543 3 555 344442 11112345566532 1 144566689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHG 175 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHps 175 (265)
|+|+++--. .+++..+.++..+.+.+-++.|
T Consensus 314 DiVi~~~~t-----------------------------~~lI~~~~l~~MK~gailiNvg 344 (479)
T 1v8b_A 314 DFFITCTGN-----------------------------VDVIKLEHLLKMKNNAVVGNIG 344 (479)
T ss_dssp SEEEECCSS-----------------------------SSSBCHHHHTTCCTTCEEEECS
T ss_pred CEEEECCCh-----------------------------hhhcCHHHHhhcCCCcEEEEeC
Confidence 999988311 2288889999888887777766
No 176
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=42.10 E-value=50 Score=31.56 Aligned_cols=59 Identities=7% Similarity=-0.032 Sum_probs=39.5
Q ss_pred CCCCceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCC---CCcHHHHHHHHcCC-CEEEEC
Q 024606 35 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRFLERHGI-PYHYLC 98 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~---~~~~v~~~a~~~gI-P~~~~~ 98 (265)
..+..||++..||+- +++..++.. . ..+|.+|..+.... .-..+.+.|++.|| |++.++
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e--~---G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD 71 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQ--K---GAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 71 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHH--T---TCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEE
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHH--c---CCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 345679999999873 344444433 2 36888887765322 12568999999999 777665
No 177
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=41.53 E-value=17 Score=31.92 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=28.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCE
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 94 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~ 94 (265)
++||+|+|.|. |.. .++.++.+. ...+++ +++++ .....++++++|++.
T Consensus 2 ~~~igiIG~G~ig~~--~~~~~l~~~-~~~~l~--v~d~~---~~~~~~~a~~~g~~~ 51 (323)
T 1xea_A 2 SLKIAMIGLGDIAQK--AYLPVLAQW-PDIELV--LCTRN---PKVLGTLATRYRVSA 51 (323)
T ss_dssp CEEEEEECCCHHHHH--THHHHHTTS-TTEEEE--EECSC---HHHHHHHHHHTTCCC
T ss_pred CcEEEEECCCHHHHH--HHHHHHHhC-CCceEE--EEeCC---HHHHHHHHHHcCCCc
Confidence 47999999875 221 133333221 136776 44442 234567888899874
No 178
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=41.52 E-value=42 Score=27.52 Aligned_cols=86 Identities=13% Similarity=0.165 Sum_probs=47.1
Q ss_pred CCCCceEEEEEeCCc--hh-HHHHHHHHH-cCCCC--ceE--EEEeeCC-CCCCCcHHHHHHHHcCCCEEEECCCCCchH
Q 024606 35 IDPKYKVAVLASKQE--HC-LVDFLYGWQ-EGKLP--VEI--TCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENERE 105 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g--~~-l~~ll~~~~-~~~l~--~~I--~~Vit~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~ 105 (265)
.++|+||.|+.+|+- |. .++++.... +..+. .+| +++-..+ -++.+....+.++++||++.....+ ...
T Consensus 15 ~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~ar-~l~- 92 (173)
T 4etm_A 15 RGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLAR-QVS- 92 (173)
T ss_dssp CSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCCCC-BCC-
T ss_pred CCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCccc-cCC-
Confidence 556789999999984 33 345655432 11122 333 2332222 2234566889999999997421111 111
Q ss_pred HHHHHHhhCCCEEEEEecCC
Q 024606 106 EELLELVQNTDFLVLARYMQ 125 (265)
Q Consensus 106 ~~l~~~l~~~D~vv~ag~~~ 125 (265)
++ .+.++|+|+...-.+
T Consensus 93 ~~---d~~~~DlIl~Md~~~ 109 (173)
T 4etm_A 93 EQ---DLDDFDYIIAMDAEN 109 (173)
T ss_dssp HH---HHHHCSEEEESSHHH
T ss_pred Hh---hcCCCCEEEEeCchH
Confidence 22 233689998776443
No 179
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=41.48 E-value=54 Score=25.03 Aligned_cols=54 Identities=19% Similarity=0.292 Sum_probs=32.6
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
....+++++|+ +.++.+-.+-+... -..+...|+++|||+..+..+ +++=.++-
T Consensus 33 ~~v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk-----~eLG~a~G 87 (119)
T 1rlg_A 33 NETTKAVERGL--AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSK-----NDLGRAVG 87 (119)
T ss_dssp HHHHHHHTTTC--CSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHHHcCC--CcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCH-----HHHHHHhC
Confidence 45566666674 55543333332211 367889999999999876532 45555554
No 180
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=41.12 E-value=38 Score=26.82 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC--CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP--NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~--~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
...++++++|+ +.++ |+++.-++. -..+..+|+++|||++++..+ .+|=+++.
T Consensus 38 ~~v~kai~~gk--akLV-iiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~G 92 (134)
T 2ale_A 38 NEATKTLNRGI--SEFI-IMAADCEPIEILLHLPLLCEDKNVPYVFVPSR-----VALGRACG 92 (134)
T ss_dssp HHHHHHHHHTC--EEEE-EEETTCSSGGGGTHHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred hHHHHHHHhCC--CeEE-EEeCCCCHHHHHHHHHHHHHhcCCCEEEECCH-----HHHHHHhC
Confidence 44556666663 5554 333322221 356889999999999887532 35555554
No 181
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=41.12 E-value=39 Score=31.08 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=38.1
Q ss_pred CCCceEEEEEeCCc-h-hHHHHHHHHHcCCCCceEEEEeeCCCCCC-----------CcHHHHHHHHcCCCEEEEC
Q 024606 36 DPKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 36 ~~~~rIav~~Sg~g-~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-----------~~~v~~~a~~~gIP~~~~~ 98 (265)
.+.+||+|..||+- | .+..++.. .| .++.+|..+..... -..+.++|++.|||++.++
T Consensus 7 ~~~~kVlVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~ 77 (376)
T 2hma_A 7 NSKTRVVVGMSGGVDSSVTALLLKE--QG---YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVN 77 (376)
T ss_dssp GGGSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCeEEEEEeCHHHHHHHHHHHHH--cC---CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 34579999999873 3 34444433 23 68888877542111 1237788999999998876
No 182
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=41.10 E-value=1e+02 Score=27.74 Aligned_cols=118 Identities=13% Similarity=0.132 Sum_probs=64.5
Q ss_pred CceEEEEEeCC-chhHHHHHH-HHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLY-GWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~-~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.++|+|+|.|. |..+...+. +. ..+|. +.++... . .+.+.+.|+.+ .. ++.++++++
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~-----G~~V~--~~d~~~~---~-~~~~~~~g~~~--~~--------~l~ell~~a 221 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGL-----GMKLV--YYDVAPA---D-AETEKALGAER--VD--------SLEELARRS 221 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-----CCEEE--EECSSCC---C-HHHHHHHTCEE--CS--------SHHHHHHHC
T ss_pred CCEEEEEEECHHHHHHHHHHHHhc-----CCEEE--EECCCCc---c-hhhHhhcCcEE--eC--------CHHHHhccC
Confidence 46899998876 544444333 32 35653 3443211 1 23355566542 11 123445589
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHH
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFD 191 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~ 191 (265)
|+|+++--.. + ...+++..+.++..+.+.+-+.-| ||. ..+..++.
T Consensus 222 DvVil~vp~~-----~--------------------~t~~li~~~~l~~mk~gailin~s-----rg~~vd~~aL~~aL~ 271 (348)
T 2w2k_A 222 DCVSVSVPYM-----K--------------------LTHHLIDEAFFAAMKPGSRIVNTA-----RGPVISQDALIAALK 271 (348)
T ss_dssp SEEEECCCCS-----G--------------------GGTTCBCHHHHHHSCTTEEEEECS-----CGGGBCHHHHHHHHH
T ss_pred CEEEEeCCCC-----h--------------------HHHHHhhHHHHhcCCCCCEEEECC-----CCchhCHHHHHHHHH
Confidence 9999874221 0 122377778888877665444433 342 24667777
Q ss_pred hCCCEeEEEEEEecCc
Q 024606 192 AGVKLIGATSHFVTEE 207 (265)
Q Consensus 192 ~G~~~~GvTvH~v~~~ 207 (265)
+| ...|+-++....+
T Consensus 272 ~~-~i~gaglDv~~~E 286 (348)
T 2w2k_A 272 SG-KLLSAGLDVHEFE 286 (348)
T ss_dssp TT-SEEEEEESSCTTT
T ss_pred hC-CceEEEeccCCCC
Confidence 76 4566777776644
No 183
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=41.02 E-value=20 Score=28.04 Aligned_cols=76 Identities=14% Similarity=0.127 Sum_probs=43.1
Q ss_pred CceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
|+||.|+.+|+- |. .++++.....+. .++.--=+. ..+.+....+.++++||++.....+ ... + ..+.+
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~~~--~~v~SAGt~-g~~~~~~a~~~l~e~Gid~s~~~sr-~l~-~---~~~~~ 75 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGAGK--IAVTSCGLE-SSRVHPTAIAMMEEVGIDISGQTSD-PIE-N---FNADD 75 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSBTT--EEEEEECCT-TSSCCHHHHHHHHTTTCCCSSCCCC-CGG-G---CCGGG
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcCCC--EEEEcccCC-CCCCCHHHHHHHHHcCCCcccCccc-cCC-h---HHhcc
Confidence 468999998874 33 456777654332 333222222 2334667889999999997421111 111 1 11237
Q ss_pred CCEEEEE
Q 024606 115 TDFLVLA 121 (265)
Q Consensus 115 ~D~vv~a 121 (265)
+|+|+..
T Consensus 76 ~DlIi~m 82 (134)
T 2l17_A 76 YDVVISL 82 (134)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8999876
No 184
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=40.61 E-value=41 Score=32.19 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=37.6
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc--CCCEEEECCCCCchHHHHHHHhh
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH--GIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~--gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
+++||+|+|.|. |.++..-+.. .| ++|+ +.+++ ...+.+++++. |..+.... .-+++.+.++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~--~G---~~V~--v~dr~---~~~~~~l~~~g~~g~~i~~~~-----s~~e~v~~l~ 67 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMND--HG---FVVC--AFNRT---VSKVDDFLANEAKGTKVVGAQ-----SLKEMVSKLK 67 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---THHHHHHHHTTTTTSSCEECS-----SHHHHHHTBC
T ss_pred CCCEEEEEChhHHHHHHHHHHHH--CC---CEEE--EEeCC---HHHHHHHHhcccCCCceeccC-----CHHHHHhhcc
Confidence 468999999987 6665533332 24 4553 34542 23344444432 33332211 2245555555
Q ss_pred CCCEEEEE
Q 024606 114 NTDFLVLA 121 (265)
Q Consensus 114 ~~D~vv~a 121 (265)
++|+|+++
T Consensus 68 ~aDvVil~ 75 (484)
T 4gwg_A 68 KPRRIILL 75 (484)
T ss_dssp SSCEEEEC
T ss_pred CCCEEEEe
Confidence 79999875
No 185
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=40.34 E-value=23 Score=31.29 Aligned_cols=66 Identities=9% Similarity=0.142 Sum_probs=35.5
Q ss_pred CCceEEEEEeCC-chhHH-HHHHHHHcCCCCc-eEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 37 PKYKVAVLASKQ-EHCLV-DFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~~-~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
.+|||+|+|.|. |..+. .|.++ | + +|. +.+++. +....+.+.+.|+... . . ..+.++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~---G---~~~V~--~~dr~~--~~~~~~~~~~~g~~~~--~-----~---~~e~~~ 82 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA---G---AIDMA--AYDAAS--AESWRPRAEELGVSCK--A-----S---VAEVAG 82 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH---S---CCEEE--EECSSC--HHHHHHHHHHTTCEEC--S-----C---HHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHC---C---CCeEE--EEcCCC--CHHHHHHHHHCCCEEe--C-----C---HHHHHh
Confidence 358999999987 55443 34333 4 4 543 334420 1234566677786432 1 1 223445
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++-
T Consensus 83 ~aDvVi~~v 91 (312)
T 3qsg_A 83 ECDVIFSLV 91 (312)
T ss_dssp HCSEEEECS
T ss_pred cCCEEEEec
Confidence 789988764
No 186
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=40.02 E-value=2e+02 Score=25.47 Aligned_cols=158 Identities=15% Similarity=0.163 Sum_probs=78.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.+||+|+|.|. |..+...+.+. | .+|.+ +...... .+.+.+.|+... ++.+.++++|
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~--G---~~V~~-~d~~~~~-----~~~~~~~g~~~~-----------~l~e~l~~aD 212 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF--G---VQRFL-YTGRQPR-----PEEAAEFQAEFV-----------STPELAAQSD 212 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG--T---CCEEE-EESSSCC-----HHHHHTTTCEEC-----------CHHHHHHHCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--C---CEEEE-ECCCCcc-----hhHHHhcCceeC-----------CHHHHHhhCC
Confidence 47899999876 54444433332 3 56643 3222111 233455564321 1234455899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++--.. -...+++..++++..+.+.+-+.-| ||. ..+..++.+
T Consensus 213 vVi~~vp~~-------------------------~~t~~~i~~~~~~~mk~gailIn~s-----rg~~v~~~aL~~aL~~ 262 (330)
T 2gcg_A 213 FIVVACSLT-------------------------PATEGLCNKDFFQKMKETAVFINIS-----RGDVVNQDDLYQALAS 262 (330)
T ss_dssp EEEECCCCC-------------------------TTTTTCBSHHHHHHSCTTCEEEECS-----CGGGBCHHHHHHHHHH
T ss_pred EEEEeCCCC-------------------------hHHHHhhCHHHHhcCCCCcEEEECC-----CCcccCHHHHHHHHHc
Confidence 998864221 0122367677777776554334333 332 346667777
Q ss_pred CCCEeEEEEEEecCc-cCCC-CeeEEEEEecCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKLIGATSHFVTEE-LDAG-PIIEQMVERVSHR---DNLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~~GvTvH~v~~~-~D~G-~II~Q~~~~I~~~---dt~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|. ..|+.+++...+ +..+ +++....+-+.|. .|.+. ..++ .+.+.+.+..+.+|+
T Consensus 263 ~~-i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~-~~~~----~~~~~~n~~~~~~g~ 322 (330)
T 2gcg_A 263 GK-IAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRT-RNTM----SLLAANNLLAGLRGE 322 (330)
T ss_dssp TS-SSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHH-HHHH----HHHHHHHHHHHHHTC
T ss_pred CC-ccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHH-HHHH----HHHHHHHHHHHHcCC
Confidence 53 456777766554 2333 2332233334333 33332 2222 334455566666674
No 187
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=39.30 E-value=51 Score=28.81 Aligned_cols=69 Identities=10% Similarity=0.213 Sum_probs=35.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECC-----CCC-chHHHHHH
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-----KEN-EREEELLE 110 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~-----~~~-~~~~~l~~ 110 (265)
+|||+|+|.|. |+.+...|.. .| ++|+. +... . .+..++.|+.+..... ... ..+. +
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~--~g---~~V~~-~~r~----~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~---~ 65 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQR--SG---EDVHF-LLRR----D---YEAIAGNGLKVFSINGDFTLPHVKGYRAP---E 65 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHH--TS---CCEEE-ECST----T---HHHHHHTCEEEEETTCCEEESCCCEESCH---H
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CC---CeEEE-EEcC----c---HHHHHhCCCEEEcCCCeEEEeeceeecCH---H
Confidence 37999999988 5555544433 24 46653 3322 1 2555677875442100 000 0111 2
Q ss_pred HhhCCCEEEEEe
Q 024606 111 LVQNTDFLVLAR 122 (265)
Q Consensus 111 ~l~~~D~vv~ag 122 (265)
.+..+|+|+++-
T Consensus 66 ~~~~~D~vilav 77 (312)
T 3hn2_A 66 EIGPMDLVLVGL 77 (312)
T ss_dssp HHCCCSEEEECC
T ss_pred HcCCCCEEEEec
Confidence 245899999874
No 188
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=39.16 E-value=52 Score=25.33 Aligned_cols=54 Identities=19% Similarity=0.257 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
....+++++|+ +.++.+-.+-+... -..+..+|+++|||++++..+ +++=.++-
T Consensus 34 ~~v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk-----~eLG~a~G 88 (124)
T 2fc3_A 34 NETTKAVERGL--AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSK-----KRLGEAAG 88 (124)
T ss_dssp HHHHHHHHTTC--CSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHHHcCC--ceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCH-----HHHHHHhC
Confidence 45566666674 55543333322111 356889999999999876532 45555554
No 189
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=38.90 E-value=31 Score=26.72 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=23.5
Q ss_pred eEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 67 EITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 67 ~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
++.|+|-.....++..+.+.|+++|||+...+
T Consensus 74 ~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 74 NVRCLILTGNLEPVQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp TEEEEEEETTCCCCHHHHHHHHHHTCCEEECS
T ss_pred CCcEEEEcCCCCCCHHHHHHHHHCCCeEEEEC
Confidence 46665544444467778999999999998755
No 190
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=38.77 E-value=73 Score=25.91 Aligned_cols=31 Identities=0% Similarity=0.052 Sum_probs=24.3
Q ss_pred EEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 68 ITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 68 I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
|.++.|-..+..+..+.++|+++|+|+..++
T Consensus 41 v~~lATid~K~dE~gL~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 41 VDYLATAPLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp CCEEEESSCCSCCHHHHHHHHHTTCCEEECC
T ss_pred eEEEEchhhhCCCHHHHHHHHHhCCCeEEEC
Confidence 6677776555456779999999999999875
No 191
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=38.68 E-value=60 Score=27.98 Aligned_cols=79 Identities=13% Similarity=0.120 Sum_probs=43.8
Q ss_pred CCceEEEEEeC-----Cch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCc----hH
Q 024606 37 PKYKVAVLASK-----QEH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE----RE 105 (265)
Q Consensus 37 ~~~rIav~~Sg-----~g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~----~~ 105 (265)
++|||+++... +|. .+..+.+.+ . .++|..+..... ......+....|+++..++..... ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~---g~~v~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-D---PESIVVFASTQN---AEEAHAYDKTLDYEVIRWPRSVMLPTPTTA 75 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-C---GGGEEEEEECSS---HHHHHHHHTTCSSEEEEESSSSCCSCHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-c---CCeEEEEECCCC---ccchhhhccccceEEEEccccccccchhhH
Confidence 46899999861 222 344555555 2 367764444331 111245556778888877643211 12
Q ss_pred HHHHHHhh--CCCEEEEEe
Q 024606 106 EELLELVQ--NTDFLVLAR 122 (265)
Q Consensus 106 ~~l~~~l~--~~D~vv~ag 122 (265)
..+.+.++ ++|+|++.+
T Consensus 76 ~~l~~~~~~~~~Dvv~~~~ 94 (394)
T 3okp_A 76 HAMAEIIREREIDNVWFGA 94 (394)
T ss_dssp HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 34555565 799997543
No 192
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=38.50 E-value=26 Score=29.69 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=12.5
Q ss_pred CCCceEEEEEeCC-chhHHH
Q 024606 36 DPKYKVAVLASKQ-EHCLVD 54 (265)
Q Consensus 36 ~~~~rIav~~Sg~-g~~l~~ 54 (265)
-..+||+|+|.|. |+.+..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~ 36 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAG 36 (245)
T ss_dssp --CCEEEEECCSHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHH
Confidence 3458999999887 555443
No 193
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=38.49 E-value=34 Score=27.51 Aligned_cols=82 Identities=17% Similarity=0.213 Sum_probs=45.8
Q ss_pred CCceEEEEEeCCc--hh-HHHHHHHHHc-CCCC---ceEE--EEeeCC-CCCCCcHHHHHHHHcCCCEEEECCCCCchHH
Q 024606 37 PKYKVAVLASKQE--HC-LVDFLYGWQE-GKLP---VEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREE 106 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~-l~~ll~~~~~-~~l~---~~I~--~Vit~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~ 106 (265)
+++||.|+.+|+- |. .++++..... ..+. .+|. ++-..+ ..+.+....+.++++||++. ...+ ...++
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~~ar-~l~~~ 83 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGK-QIKTK 83 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-CCBC-BCCGG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-ceEe-ECCHH
Confidence 4578999999884 33 4566655432 1122 2332 222211 22356678899999999975 2211 11111
Q ss_pred HHHHHhhCCCEEEEEecC
Q 024606 107 ELLELVQNTDFLVLARYM 124 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag~~ 124 (265)
.+.++|+|+...-.
T Consensus 84 ----~~~~~DlIl~M~~~ 97 (161)
T 1d1q_A 84 ----HFDEYDYIIGMDES 97 (161)
T ss_dssp ----GGGTCSEEEESSHH
T ss_pred ----HHhhCCEEEEeCHH
Confidence 23479999987643
No 194
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.41 E-value=31 Score=25.46 Aligned_cols=41 Identities=7% Similarity=0.178 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC--CcHHHHHHHHcCCCEEEE
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP--NSHVIRFLERHGIPYHYL 97 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~--~~~v~~~a~~~gIP~~~~ 97 (265)
...++++++|+ +.++ ++. .|.+. -..+..+|++++||++.+
T Consensus 21 ~~v~kai~~gk--a~lV-iiA-~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 21 NETIRLAKTGG--AKLI-IVA-KNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHTC--CSEE-EEE-CCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCC--ccEE-EEe-CCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 45566666674 5554 333 22222 145778899999998766
No 195
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=38.16 E-value=47 Score=25.56 Aligned_cols=54 Identities=19% Similarity=0.346 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
....+++++|+ +.++.+-.+-+... -..+..+|+++|||++++..+ ++|=.++-
T Consensus 35 ~~v~kai~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~G 89 (120)
T 1xbi_A 35 NEVTKAVERGI--AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASK-----QDLGKAAG 89 (120)
T ss_dssp HHHHHHHHHTC--CSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHHHcCC--ceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCH-----HHHHHHhC
Confidence 44556666664 55543333322111 356889999999999877532 45555554
No 196
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=38.07 E-value=38 Score=26.42 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=43.1
Q ss_pred ceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 39 YKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 39 ~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
+||.|+.+|+- |. .++++.....+ ..++.--=+.. .+.+....+.++++||++.....+ ... ++ .+.++
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~--~~~v~SAGt~~-~~~~p~a~~~l~~~Gid~s~~~sr-~l~-~~---~~~~~ 75 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGD--EWKVYSAGIEA-HGLNPNAVKAMKEVGIDISNQTSD-IID-SD---ILNNA 75 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCT--TEEEEEEESSC-CCCCHHHHHHHHHTTCCCTTCCCC-BCC-HH---HHTTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCC--CEEEEcCcCCC-CCCCHHHHHHHHHcCCCcccCccC-cCC-HH---HhhcC
Confidence 58999999874 33 45677765433 23333222222 235667889999999997421111 111 21 23479
Q ss_pred CEEEEE
Q 024606 116 DFLVLA 121 (265)
Q Consensus 116 D~vv~a 121 (265)
|+|+..
T Consensus 76 D~Ii~m 81 (139)
T 1jl3_A 76 DLVVTL 81 (139)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999865
No 197
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=38.05 E-value=40 Score=26.09 Aligned_cols=76 Identities=9% Similarity=0.072 Sum_probs=43.4
Q ss_pred CceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
++||.|+.+|+- |. .++++.....+ ..++.--=+.. .+.+....+.++++||++.....+ ... ++ .+.+
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~--~~~v~SAGt~~-~~~~p~a~~~l~~~Gid~s~~~ar-~l~-~~---~~~~ 74 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGE--GWNVYSAGIET-HGVNPKAIEAMKEVDIDISNHTSD-LID-ND---ILKQ 74 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTT--TEEEEEEESSC-CCCCHHHHHHHHHTTCCCTTCCCC-BCC-HH---HHHH
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCC--CEEEEcCcCCC-CCCCHHHHHHHHHcCCCcccCccc-cCC-hH---Hhcc
Confidence 468999999884 33 45677665432 23443222222 245667889999999997421111 111 22 1236
Q ss_pred CCEEEEE
Q 024606 115 TDFLVLA 121 (265)
Q Consensus 115 ~D~vv~a 121 (265)
+|+|+..
T Consensus 75 ~D~Ii~m 81 (131)
T 1jf8_A 75 SDLVVTL 81 (131)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 8999865
No 198
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=37.96 E-value=88 Score=29.69 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=53.1
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.++ .++| ++++++ ..-...|...|..+. .+.+.++++|
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~-----Ga~V--iv~D~~----p~~a~~A~~~G~~~~-----------sL~eal~~AD 268 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF-----GARV--VVTEVD----PINALQAAMEGYQVL-----------LVEDVVEEAH 268 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TCEE--EEECSC----HHHHHHHHHTTCEEC-----------CHHHHTTTCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-----CCEE--EEECCC----hhhhHHHHHhCCeec-----------CHHHHHhhCC
Confidence 36888888776 44444444442 3554 345542 112234556675321 1445666899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCC
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHG 175 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHps 175 (265)
+++++.-.+ ++|..+.++..+.+.+-++.|
T Consensus 269 VVilt~gt~-----------------------------~iI~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 269 IFVTTTGND-----------------------------DIITSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp EEEECSSCS-----------------------------CSBCTTTGGGCCTTEEEEECS
T ss_pred EEEECCCCc-----------------------------CccCHHHHhhcCCCcEEEEeC
Confidence 998754221 388888999999998888887
No 199
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=37.57 E-value=1.2e+02 Score=25.81 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=54.9
Q ss_pred hHhhhHhhhccc--ccccc--CCCCCCceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHH
Q 024606 16 FFKLSKMFNAMR--SVVRV--PDIDPKYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 88 (265)
Q Consensus 16 ~~~~~~~~~~~~--~~~~~--~~~~~~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~ 88 (265)
+.-|+++|-..+ ...++ .....++||.|+++|+- |. .++++..+..+. .++.--=+.+..+.+....+.++
T Consensus 55 lp~l~er~a~~rl~~l~~~~~~~~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~ 132 (213)
T 3t38_A 55 LPILAEGFAKDRLHALAVAEGKVASPVPQVLFICVHNAGRSQIASALLSHYAGSS--VEVRSAGSLPASEIHPLVLEILS 132 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSSCCCEEEEEESSSSSHHHHHHHHHHHHHGGG--CEEEEEESSCCSSCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhhcCcccCCCCEEEEECCCchhHHHHHHHHHHHhccCc--eEEEecccCCCCCCCHHHHHHHH
Confidence 345566664333 12222 23445789999999874 33 456666654433 33322223333345667899999
Q ss_pred HcCCCEEEECCCCCchHHHHHHHhhCCCEEEEEec
Q 024606 89 RHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 123 (265)
Q Consensus 89 ~~gIP~~~~~~~~~~~~~~l~~~l~~~D~vv~ag~ 123 (265)
++||++.....+ ... ++ .+..+|+|+..+.
T Consensus 133 e~Gidis~~~sr-~l~-~~---~~~~~DlIitMd~ 162 (213)
T 3t38_A 133 ERGVNISDAFPK-PLT-DD---VIRASDYVITMGC 162 (213)
T ss_dssp HTTCCCTTCCCC-BCC-HH---HHHHCSEEEESSC
T ss_pred HcCCCcccCcCC-cCC-HH---HhccCCEEEEecC
Confidence 999986421111 111 22 1236899987653
No 200
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=37.48 E-value=50 Score=25.26 Aligned_cols=54 Identities=13% Similarity=0.287 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
....+++++|+ +.++.+-.+-+... -..+..+|+++|||++++..+ +++=.++-
T Consensus 35 ~~v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk-----~eLG~a~G 89 (120)
T 1vq8_F 35 NETTKSIERGS--AELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQ-----DDLGHAAG 89 (120)
T ss_dssp HHHHHHHHHTC--CSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHHHcCC--ceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCH-----HHHHHHhC
Confidence 44556666664 55543333322111 356889999999999876532 45555553
No 201
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=37.41 E-value=13 Score=33.47 Aligned_cols=35 Identities=11% Similarity=0.052 Sum_probs=21.1
Q ss_pred CCceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCC
Q 024606 37 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
+++||+|+|.|. |.. ....+... + .+++++|+...
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~--~~~l~av~d~~ 40 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTN--P--HFELYKIVERS 40 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHC--T--TEEEEEEECSS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhC--C--CeEEEEEEcCC
Confidence 468999999876 322 22223221 2 47898887644
No 202
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=36.97 E-value=1.4e+02 Score=25.67 Aligned_cols=83 Identities=7% Similarity=0.060 Sum_probs=43.3
Q ss_pred CCceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCE-EEECCC---CCch------
Q 024606 37 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAK---ENER------ 104 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~-~~~~~~---~~~~------ 104 (265)
.||||++++.... .....+++++.+. ..+++..+++.. ......+..+..|+.+ +.++.. .+..
T Consensus 4 ~mmkIl~v~~~~~~~~~~~~l~~~L~~~-~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (376)
T 1v4v_A 4 GMKRVVLAFGTRPEATKMAPVYLALRGI-PGLKPLVLLTGQ---HREQLRQALSLFGIQEDRNLDVMQERQALPDLAARI 79 (376)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTS-TTEEEEEEECSS---CHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred CceEEEEEEeccHHHHHHHHHHHHHHhC-CCCceEEEEcCC---cHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHH
Confidence 4589998874321 2245677776542 136766566643 1112334455678765 333211 1110
Q ss_pred HHHHHHHhh--CCCEEEEEec
Q 024606 105 EEELLELVQ--NTDFLVLARY 123 (265)
Q Consensus 105 ~~~l~~~l~--~~D~vv~ag~ 123 (265)
-..+.+.++ +||+|++.++
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~ 100 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGD 100 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEeCC
Confidence 123444554 7999998764
No 203
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=36.73 E-value=49 Score=29.35 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=20.7
Q ss_pred CCceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCC
Q 024606 37 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
+++||+|+|.|. |.. ....+.. .+ .+++++|+...
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~--~~--~~~l~av~d~~ 42 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMG--TP--GLELAGVSSSD 42 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHT--ST--TEEEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHhh--CC--CcEEEEEECCC
Confidence 468999999876 322 2222222 12 47888877643
No 204
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=36.50 E-value=1.1e+02 Score=27.04 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=30.7
Q ss_pred CceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 38 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 38 ~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
+|||+++..+. |+ .+.+|.+++.+. .++|..+.+.. ..+..++.|+.++.++
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~-------~~~~~~~~g~~~~~~~ 61 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV-------FADKVAATGPRPVLYH 61 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHTTSCEEEECC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEEcC
Confidence 47999986654 43 245666665542 37876443322 1345667788877665
No 205
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=36.45 E-value=94 Score=28.89 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=57.3
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC-----CCCC--------
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-----AKEN-------- 102 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~-----~~~~-------- 102 (265)
+..||+|+|.|. |..+..++.++ | ++|. +.++. ....+.+++.|.-+..++ ....
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--G---a~V~--v~D~~----~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--G---AKTT--GYDVR----PEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--T---CEEE--EECSS----GGGHHHHHHTTCEECCCC-------------CHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--C---CEEE--EEeCC----HHHHHHHHHcCCeEEeccccccccccchhhhhHHH
Confidence 457999998876 55555555554 3 5553 34431 123566777776433211 0000
Q ss_pred --chHHHHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 103 --EREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 103 --~~~~~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
...+.+.+.++++|+|+.+-. +|..+. ..++..+.++..+.+.+-+--|.
T Consensus 252 ~~~~~~~l~e~l~~aDIVI~tv~---iPg~~a---------------------p~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 252 RAQQQQALEDAITKFDIVITTAL---VPGRPA---------------------PRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCC---CTTSCC---------------------CCCBCHHHHHTSCTTCEEEETTG
T ss_pred HhhhHHHHHHHHhcCCEEEECCC---CCCccc---------------------ceeecHHHHhcCCCCcEEEEEeC
Confidence 012345566679999987531 120000 01788999998887766655554
No 206
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=36.43 E-value=54 Score=25.63 Aligned_cols=44 Identities=11% Similarity=0.092 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHHHHHHHcCCCEEEECC
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~~~a~~~gIP~~~~~~ 99 (265)
...++++++|+ +.++ |+.+.-++.+ ..+..+|+++|||++.++.
T Consensus 30 ~~v~Kai~~gk--a~LV-iiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 30 HEVLRTIEAKQ--ALFV-CVAEDCDQGNYVKLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp HHHHHHHHHTC--CSEE-EEESSCCSTTHHHHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHcCC--ceEE-EEeCCCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 33445555563 5554 3443222223 4578999999999998874
No 207
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=36.40 E-value=15 Score=32.67 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=20.4
Q ss_pred CceEEEEEeCC-chh--HHHHHHHHHcCCCCceEEEEeeCC
Q 024606 38 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~--l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
|+||+|+|.|. |.. +..++.. ...+++++|+...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~----~~~~~l~av~d~~ 38 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNR----KDSWHVAHIFRRH 38 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTC----TTTEEEEEEECSS
T ss_pred ceEEEEEecCHHHHHHHHHHHHhc----CCCeEEEEEEcCC
Confidence 58999999886 321 2212221 1248898888754
No 208
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=36.23 E-value=2.3e+02 Score=25.40 Aligned_cols=83 Identities=11% Similarity=0.109 Sum_probs=45.1
Q ss_pred CCCceEEEEEeCCch---hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCC-CEEEECC--C-CCch----
Q 024606 36 DPKYKVAVLASKQEH---CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLCA--K-ENER---- 104 (265)
Q Consensus 36 ~~~~rIav~~Sg~g~---~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gI-P~~~~~~--~-~~~~---- 104 (265)
..||||++++ |.-+ .+..|++++++. ...++..++|.... .-..+..+..|| |-+.+.- . .+..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~-~~~~~~~~~tG~h~---~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~ 97 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQD-NRFVAKVCVTGQHR---EMLDQVLELFSITPDFDLNIMEPGQTLNGVTS 97 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHC-TTEEEEEEECCSSS---HHHHHHHHHTTCCCSEECCCCCTTCCHHHHHH
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhC-CCCcEEEEEecccH---HHHHHHHHhcCCCCceeeecCCCCCCHHHHHH
Confidence 4467887765 4322 466777877653 13677667775421 123455678898 4333331 1 1111
Q ss_pred --HHHHHHHhh--CCCEEEEEec
Q 024606 105 --EEELLELVQ--NTDFLVLARY 123 (265)
Q Consensus 105 --~~~l~~~l~--~~D~vv~ag~ 123 (265)
-.++.+.++ +||+|++.|.
T Consensus 98 ~~~~~l~~~l~~~kPDvVi~~g~ 120 (396)
T 3dzc_A 98 KILLGMQQVLSSEQPDVVLVHGD 120 (396)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHHHhcCCCEEEEECC
Confidence 123444444 8999998874
No 209
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=36.22 E-value=25 Score=30.34 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=33.4
Q ss_pred CceEEEEEeCC-chhHH-HHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQ-EHCLV-DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
|+||+|+|.|. |+.+. .|.++ | ++|. +.+++ .... +.+.+.|+... . ...+.++++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~---G---~~V~--~~dr~---~~~~-~~~~~~g~~~~--~--------~~~~~~~~a 58 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA---G---FDVT--VWNRN---PAKC-APLVALGARQA--S--------SPAEVCAAC 58 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH---T---CCEE--EECSS---GGGG-HHHHHHTCEEC--S--------CHHHHHHHC
T ss_pred CCeEEEEccCHHHHHHHHHHHHC---C---CeEE--EEcCC---HHHH-HHHHHCCCeec--C--------CHHHHHHcC
Confidence 47999999987 55554 33333 4 4654 33442 1222 33344465321 1 122344578
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 59 dvvi~~v 65 (287)
T 3pdu_A 59 DITIAML 65 (287)
T ss_dssp SEEEECC
T ss_pred CEEEEEc
Confidence 9988764
No 210
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=36.11 E-value=56 Score=27.76 Aligned_cols=68 Identities=15% Similarity=0.094 Sum_probs=35.9
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh-CC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-NT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~-~~ 115 (265)
++||+|+|.|. |+.+...+.. .|. ..+|. +.+++ ..-.+.+++.|+....... +.+.+. ++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~--~g~-~~~V~--~~d~~----~~~~~~~~~~g~~~~~~~~--------~~~~~~~~a 63 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRR--SGF-KGKIY--GYDIN----PESISKAVDLGIIDEGTTS--------IAKVEDFSP 63 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--TTC-CSEEE--EECSC----HHHHHHHHHTTSCSEEESC--------GGGGGGTCC
T ss_pred CcEEEEEecCHHHHHHHHHHHh--cCC-CcEEE--EEeCC----HHHHHHHHHCCCcccccCC--------HHHHhcCCC
Confidence 46899999876 5544433332 231 22553 33432 2234556677874222211 113566 89
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 64 DvVilav 70 (281)
T 2g5c_A 64 DFVMLSS 70 (281)
T ss_dssp SEEEECS
T ss_pred CEEEEcC
Confidence 9998874
No 211
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=36.07 E-value=90 Score=30.14 Aligned_cols=60 Identities=10% Similarity=0.107 Sum_probs=38.7
Q ss_pred CCCCceEEEEEeCC--chhHHHHHHHHH-cCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEEC
Q 024606 35 IDPKYKVAVLASKQ--EHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 98 (265)
Q Consensus 35 ~~~~~rIav~~Sg~--g~~l~~ll~~~~-~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~ 98 (265)
..+|+||++|||-+ |+.--+++.... .++ .++|+++..++ .-.-+.+.|++++-.+..+.
T Consensus 74 ~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd-~f~V~aLaAg~---Nv~lL~eQ~~ef~P~~v~v~ 136 (488)
T 3au8_A 74 IKKPINVAIFGSTGSIGTNALNIIRECNKIEN-VFNVKALYVNK---SVNELYEQAREFLPEYLCIH 136 (488)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHHHHSC-CEEEEEEEESS---CHHHHHHHHHHHCCSEEEES
T ss_pred hhcceEEEEEccCcHHHHHHHHHHHcccCCCC-eEEEEEEEcCC---CHHHHHHHHHHcCCCEEEEc
Confidence 45567899999954 555555665532 222 48999988865 22446788888988777664
No 212
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=35.82 E-value=30 Score=30.12 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=35.1
Q ss_pred CCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 36 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 36 ~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
+.++||+|+|.|. |+.+...+.. .| ++|. +.+++ ....+.+.+.|+.... .. +.+.+++
T Consensus 5 ~~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr~----~~~~~~~~~~g~~~~~-~~--------~~e~~~~ 64 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGMGAARSCLR--AG---LSTW--GADLN----PQACANLLAEGACGAA-AS--------AREFAGV 64 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSC----HHHHHHHHHTTCSEEE-SS--------STTTTTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CC---CeEE--EEECC----HHHHHHHHHcCCcccc-CC--------HHHHHhc
Confidence 3468999999887 5554433322 23 5654 33442 2234445566776521 11 1123447
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++-
T Consensus 65 aDvvi~~v 72 (303)
T 3g0o_A 65 VDALVILV 72 (303)
T ss_dssp CSEEEECC
T ss_pred CCEEEEEC
Confidence 89888764
No 213
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=35.69 E-value=41 Score=27.81 Aligned_cols=16 Identities=31% Similarity=0.364 Sum_probs=10.2
Q ss_pred CCceEEEEEeCC-chhH
Q 024606 37 PKYKVAVLASKQ-EHCL 52 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l 52 (265)
.++||+|+|.|. |..+
T Consensus 27 ~~~~I~iiG~G~~G~~l 43 (215)
T 2vns_A 27 EAPKVGILGSGDFARSL 43 (215)
T ss_dssp --CCEEEECCSHHHHHH
T ss_pred CCCEEEEEccCHHHHHH
Confidence 468999999776 4433
No 214
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=35.66 E-value=1.1e+02 Score=25.83 Aligned_cols=16 Identities=13% Similarity=0.036 Sum_probs=11.0
Q ss_pred HHHHHhhCCCEEEEEe
Q 024606 107 ELLELVQNTDFLVLAR 122 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag 122 (265)
+..+.+..+|.+|++.
T Consensus 76 ~~~~~l~~aD~iv~~~ 91 (218)
T 3rpe_A 76 SEIENYLWADTIIYQM 91 (218)
T ss_dssp HHHHHHHHCSEEEEEE
T ss_pred HHHHHHHhCCEEEEEC
Confidence 4456666899887764
No 215
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=35.09 E-value=57 Score=29.10 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=20.5
Q ss_pred CCceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCC
Q 024606 37 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
+++||+|+|.|. |.. ....+.. ...+++++|+...
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~----~~~~~l~av~d~~ 40 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDV----LDEYQISKIMTSR 40 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTT----CTTEEEEEEECSC
T ss_pred CcceEEEEccCHHHHHHHHHHHhh----CCCeEEEEEEcCC
Confidence 468999999876 221 2222222 1147888877643
No 216
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=35.07 E-value=45 Score=27.47 Aligned_cols=56 Identities=5% Similarity=-0.014 Sum_probs=34.4
Q ss_pred ceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCC---CcHHHHHHHHcCCCEEEECC
Q 024606 39 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 39 ~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~---~~~v~~~a~~~gIP~~~~~~ 99 (265)
-||+|-.||+- +.|..++... + .++.+|..++.-.. ...+.++|+++|||+..+..
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~--~---~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~~ 105 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQI--R---PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRA 105 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHH--S---TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEecCCHHHHHHHHHHHHh--C---CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEeC
Confidence 47888888753 3444555443 2 24555555553211 14578899999999987753
No 217
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=35.06 E-value=49 Score=26.74 Aligned_cols=81 Identities=11% Similarity=0.106 Sum_probs=43.8
Q ss_pred CCceEEEEEeCCc--hh-HHHHHHHHH--cCCCCceEEEEeeCC---CCCCCcHHHHHHHHcCCCEEEECCCCCchHHHH
Q 024606 37 PKYKVAVLASKQE--HC-LVDFLYGWQ--EGKLPVEITCVISNH---DRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 108 (265)
Q Consensus 37 ~~~rIav~~Sg~g--~~-l~~ll~~~~--~~~l~~~I~~Vit~~---~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l 108 (265)
.|+||.|+.+|+- |. .++++.... .|--..+|.--=+.. .++.+....+.++++||++.....+ ..
T Consensus 5 ~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~~ar-~l----- 78 (158)
T 3rof_A 5 GMVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISE-LF----- 78 (158)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCSTTCCCCHHHHHHHHHTTCCCTTCCCC-BC-----
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcccCCCCCHHHHHHHHHcCCCcCCCcce-EC-----
Confidence 3689999999874 33 445665532 121113332222222 2235667889999999997421111 01
Q ss_pred HHHhhCCCEEEEEecC
Q 024606 109 LELVQNTDFLVLARYM 124 (265)
Q Consensus 109 ~~~l~~~D~vv~ag~~ 124 (265)
.+.. ++|+|+...-.
T Consensus 79 ~~~~-~~DlIi~Md~~ 93 (158)
T 3rof_A 79 EATD-DFDYIVAMDQS 93 (158)
T ss_dssp CTTC-CCSEEEESSHH
T ss_pred Chhh-cCCEEEEcCHH
Confidence 1111 78999876543
No 218
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=34.97 E-value=1.1e+02 Score=27.67 Aligned_cols=159 Identities=6% Similarity=0.021 Sum_probs=85.5
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.+. ..+|. +.++. .-.+.+.+.|+.. +. ++.++++++|
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-----G~~V~--~~d~~-----~~~~~~~~~g~~~--~~--------~l~ell~~aD 217 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-----GMNVL--VWGRE-----NSKERARADGFAV--AE--------SKDALFEQSD 217 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TCEEE--EECSH-----HHHHHHHHTTCEE--CS--------SHHHHHHHCS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-----CCEEE--EECCC-----CCHHHHHhcCceE--eC--------CHHHHHhhCC
Confidence 47899999887 55555555543 35653 33331 1235566778742 11 1344566899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCC----CcHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG----GKPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG----~~pi~~ai~~ 192 (265)
+|+++--.- --.++++..+.++..+.+.+-+.-| || ...+..|+.+
T Consensus 218 iV~l~~Plt-------------------------~~t~~li~~~~l~~mk~gailIN~a-----Rg~~vd~~aL~~aL~~ 267 (352)
T 3gg9_A 218 VLSVHLRLN-------------------------DETRSIITVADLTRMKPTALFVNTS-----RAELVEENGMVTALNR 267 (352)
T ss_dssp EEEECCCCS-------------------------TTTTTCBCHHHHTTSCTTCEEEECS-----CGGGBCTTHHHHHHHH
T ss_pred EEEEeccCc-------------------------HHHHHhhCHHHHhhCCCCcEEEECC-----CchhhcHHHHHHHHHh
Confidence 998764211 1123478888998887765544444 45 3567788888
Q ss_pred CCC-EeEEEEEEecCccCCCCeeEEEEEecCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVK-LIGATSHFVTEELDAGPIIEQMVERVSHRD---NLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~-~~GvTvH~v~~~~D~G~II~Q~~~~I~~~d---t~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|.- ..|.-|+.-..--..-+.+....+-+.|.- |.+. .+++ .+.+.+.+..+.+|+
T Consensus 268 g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~-~~~~----~~~~~~ni~~~~~G~ 327 (352)
T 3gg9_A 268 GRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERES-YEMY----FGIAFQNILDILQGN 327 (352)
T ss_dssp TSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHH-HHHH----HHHHHHHHHHHHTTC
T ss_pred CCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHH-HHHH----HHHHHHHHHHHHcCC
Confidence 763 345555443321122234333444455542 3332 2222 334455666666774
No 219
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=34.94 E-value=25 Score=26.13 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=30.7
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
...++++++|+ +..+.+-.+-+...-..+..+|++++||++.+..+ +++=..+-
T Consensus 24 ~~v~kai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~-----~eLG~a~G 77 (101)
T 3on1_A 24 EQVVKAVQNGQ--VTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNR-----QMLGRAIG 77 (101)
T ss_dssp HHHHHHHHTTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHHHcCC--CcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCH-----HHHHHHhC
Confidence 45566677774 55543332221111244678899999999886532 45555553
No 220
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=34.72 E-value=32 Score=28.10 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=43.1
Q ss_pred CceEEEEEeCCc--hh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
++||.|+.+|+- |. .++++..... ++.+.=+++-.....+.+....+.++++||++.....+ ... ++ .+.+
T Consensus 26 m~~VLFVCtgNicRSpmAEal~r~~~~-~~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr-~l~-~~---~~~~ 99 (168)
T 2wja_A 26 FDSILVICTGNICRSPIGERLLRRLLP-SKKINSAGVGALVDHAADESAIRVAEKNGLCLKGHRGT-KFT-SA---LARQ 99 (168)
T ss_dssp CSEEEEEESSSSSHHHHHHHHHHHHST-TSEEEEEETTCCTTCCCCHHHHHC---CCCCCTTCCCC-BCC-HH---HHTT
T ss_pred cCEEEEEcCCcHHHHHHHHHHHHHhcC-CeEEEeeecCCCCCCCCCHHHHHHHHHcCCCcccCccC-CCC-hh---Hhcc
Confidence 359999999884 33 4567766543 22222233322222345667889999999997421111 111 21 2347
Q ss_pred CCEEEEEecC
Q 024606 115 TDFLVLARYM 124 (265)
Q Consensus 115 ~D~vv~ag~~ 124 (265)
+|+|+...-.
T Consensus 100 ~DlIitM~~~ 109 (168)
T 2wja_A 100 YDLLLVMEYS 109 (168)
T ss_dssp CSEEEESSHH
T ss_pred CCEEEEcCHH
Confidence 9999987643
No 221
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=34.55 E-value=1.7e+02 Score=25.32 Aligned_cols=70 Identities=17% Similarity=0.216 Sum_probs=36.0
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..++|+|+|.|. |..+...+.+. | ++|. +.++. ... .+.+++.|+.+... +++.+.++++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~--G---~~V~--~~d~~---~~~-~~~~~~~g~~~~~~--------~~l~~~l~~a 216 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL--G---ANVK--VGARS---SAH-LARITEMGLVPFHT--------DELKEHVKDI 216 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT--T---CEEE--EEESS---HHH-HHHHHHTTCEEEEG--------GGHHHHSTTC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC--C---CEEE--EEECC---HHH-HHHHHHCCCeEEch--------hhHHHHhhCC
Confidence 357899999876 43333333332 3 4553 33331 111 23334567643211 1244556689
Q ss_pred CEEEEEecCC
Q 024606 116 DFLVLARYMQ 125 (265)
Q Consensus 116 D~vv~ag~~~ 125 (265)
|+|+++--.+
T Consensus 217 DvVi~~~p~~ 226 (300)
T 2rir_A 217 DICINTIPSM 226 (300)
T ss_dssp SEEEECCSSC
T ss_pred CEEEECCChh
Confidence 9999875333
No 222
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=34.34 E-value=55 Score=25.34 Aligned_cols=52 Identities=23% Similarity=0.317 Sum_probs=31.2
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC--CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP--NSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~--~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
....+++++|+ +.++ |+++.-++. -..+..+|+++|||+.++..+ +++=.++
T Consensus 37 ~~v~kai~~gk--a~lV-iiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~ 90 (122)
T 3o85_A 37 NEALKQVNRGK--AELV-IIAADADPIEIVLHLPLACEDKGVPYVFIGSK-----NALGRAC 90 (122)
T ss_dssp HHHHHHHHTTC--CSEE-EEETTCSSGGGGTTHHHHHHTTTCCEEEESCH-----HHHHHHT
T ss_pred HHHHHHHHcCC--ceEE-EEeCCCChHHHHHHHHHHHHHhCCCEEEECCH-----HHHHHHh
Confidence 45566666674 5554 333322221 256788999999999877532 3555555
No 223
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=34.33 E-value=56 Score=29.81 Aligned_cols=38 Identities=32% Similarity=0.480 Sum_probs=27.6
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 78 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~ 78 (265)
..+||++|+- |+.+..++..++. ...++++||+--|+.
T Consensus 3 ~~~kiv~lgG--GtGl~~ll~gL~~--~~~~iT~IVtv~DdG 40 (323)
T 2o2z_A 3 KKKNVIVFGG--GTGLSVLLRGLKT--FPVSITAIVTVADDG 40 (323)
T ss_dssp CCEEEEEEEC--SHHHHHHHHHHTT--SSEEEEEEECCCCCS
T ss_pred CCCeEEEECC--cccHHHHHHHHHh--cCCCeEEEEECCcCC
Confidence 3479999874 4556777777643 358999999988765
No 224
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=33.66 E-value=31 Score=25.66 Aligned_cols=54 Identities=7% Similarity=0.093 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
...++++++|+ +..+.+-.+-+...-..+..+|+.++||++.+..+ +||=..+-
T Consensus 25 ~~v~kai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~-----~eLG~A~G 78 (101)
T 3v7q_A 25 DLVIKEIRNAR--AKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESR-----AVLGRSIG 78 (101)
T ss_dssp HHHHHHHHTTC--CSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCH-----HHHHHHTT
T ss_pred hhhHHHHhcCc--eeEEEEeccccccchhhhcccccccCCCeeeechH-----HHHHhhhC
Confidence 45566677774 55543332221111245677899999999987532 45555553
No 225
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=33.20 E-value=33 Score=32.48 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=36.8
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCC-----EEEECCCCCchHHHHHHHh
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP-----YHYLCAKENEREEELLELV 112 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP-----~~~~~~~~~~~~~~l~~~l 112 (265)
|||+|+|.|. |+++...+.. .| ++|. +.+++ ...+.++++++|.. +... ..-+++.+.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~--~G---~~V~--v~dr~---~~~~~~l~~~~g~~~~~~~i~~~-----~~~~e~v~~l 66 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE--KG---FKVA--VFNRT---YSKSEEFMKANASAPFAGNLKAF-----ETMEAFAASL 66 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---HHHHHHHHHHTTTSTTGGGEEEC-----SCHHHHHHHB
T ss_pred CEEEEEChHHHHHHHHHHHHH--CC---CEEE--EEeCC---HHHHHHHHHhcCCCCCCCCeEEE-----CCHHHHHhcc
Confidence 7899999887 6665543332 24 4553 33441 23455566665631 2211 1123444444
Q ss_pred hCCCEEEEEe
Q 024606 113 QNTDFLVLAR 122 (265)
Q Consensus 113 ~~~D~vv~ag 122 (265)
+++|+|+++-
T Consensus 67 ~~aDvVilaV 76 (478)
T 1pgj_A 67 KKPRKALILV 76 (478)
T ss_dssp CSSCEEEECC
T ss_pred cCCCEEEEec
Confidence 4699998763
No 226
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=33.09 E-value=53 Score=28.06 Aligned_cols=63 Identities=13% Similarity=0.152 Sum_probs=32.3
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
|||+|+|.|. |..+...+.. .| ++|. +.+++ ... .+.+.+.|+... . . ..+.++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g---~~V~--~~~~~---~~~-~~~~~~~g~~~~--~-----~---~~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AG---YSLV--VSDRN---PEA-IADVIAAGAETA--S-----T---AKAIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TT---CEEE--EECSC---HHH-HHHHHHTTCEEC--S-----S---HHHHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHh--CC---CEEE--EEeCC---HHH-HHHHHHCCCeec--C-----C---HHHHHhCCCE
Confidence 7999999887 5544333322 23 5653 33431 112 333444575421 1 1 1223447899
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++-
T Consensus 65 vi~~v 69 (299)
T 1vpd_A 65 IITML 69 (299)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88774
No 227
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=33.02 E-value=87 Score=26.46 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=39.9
Q ss_pred HHHHHHHcCCC-E-EEECCCCCchHHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCC
Q 024606 83 VIRFLERHGIP-Y-HYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILS 158 (265)
Q Consensus 83 v~~~a~~~gIP-~-~~~~~~~~~~~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~ 158 (265)
+.++++++|++ + ..+. . +.-.+++.+..+ ++|++|+..+++- .+.=.+-+=..
T Consensus 204 l~~~~~~~g~~~~~~~v~-~-g~~~~~I~~~a~~~~~dLiVmG~~g~~---------------------~~~~~~~Gsv~ 260 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIE-E-GPADVLIPRTAQKLDAVVTVIGTVART---------------------GLSGALIGNTA 260 (290)
T ss_dssp HHHHHHHHTCCTTTEEEE-E-SCHHHHHHHHHHHHTCSEEEEECCSSC---------------------CGGGCCSCHHH
T ss_pred HHHHHHHcCCCcceEEEe-c-cCHHHHHHHHHHhcCCCEEEECCCCCc---------------------CCcceecchHH
Confidence 45577888985 2 1111 1 123466777766 7999999887760 01111112234
Q ss_pred hhHHhhcCCCeEEecC
Q 024606 159 GKFLRSYGKDVINIHH 174 (265)
Q Consensus 159 ~~il~~~~~~~iNiHp 174 (265)
..++...+..++-++|
T Consensus 261 ~~vl~~~~~pVLvv~~ 276 (290)
T 3mt0_A 261 EVVLDTLESDVLVLKP 276 (290)
T ss_dssp HHHHTTCSSEEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 5677777777777775
No 228
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=32.74 E-value=1.3e+02 Score=28.99 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=52.0
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
..++|+|+|.|. |..+...+.++ .++| ++++++. .. ...+...|..+. .+.+.++++
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~-----G~~V--~v~d~~~---~~-~~~a~~~G~~~~-----------~l~ell~~a 333 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGL-----GATV--WVTEIDP---IC-ALQAAMEGYRVV-----------TMEYAADKA 333 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-----TCEE--EEECSCH---HH-HHHHHTTTCEEC-----------CHHHHTTTC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-----CCEE--EEEeCCh---Hh-HHHHHHcCCEeC-----------CHHHHHhcC
Confidence 347899998776 44444444432 3565 3444421 11 112344555321 144566689
Q ss_pred CEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpsl 176 (265)
|+|+++-= ..++|..+.++..+.+.+-+..|-
T Consensus 334 DiVi~~~~-----------------------------t~~lI~~~~l~~MK~gAilINvgr 365 (494)
T 3d64_A 334 DIFVTATG-----------------------------NYHVINHDHMKAMRHNAIVCNIGH 365 (494)
T ss_dssp SEEEECSS-----------------------------SSCSBCHHHHHHCCTTEEEEECSS
T ss_pred CEEEECCC-----------------------------cccccCHHHHhhCCCCcEEEEcCC
Confidence 99998731 122888999999998877666664
No 229
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=32.65 E-value=51 Score=28.22 Aligned_cols=17 Identities=6% Similarity=0.104 Sum_probs=12.0
Q ss_pred CCceEEEEEeCC-chhHH
Q 024606 37 PKYKVAVLASKQ-EHCLV 53 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~ 53 (265)
+++||+|+|.|. |..+.
T Consensus 3 ~~~~i~iiG~G~~G~~~a 20 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMA 20 (301)
T ss_dssp -CCEEEEECCCTTHHHHH
T ss_pred CCCEEEEECccHHHHHHH
Confidence 358999999887 55443
No 230
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=32.62 E-value=1.3e+02 Score=25.52 Aligned_cols=76 Identities=9% Similarity=0.041 Sum_probs=37.8
Q ss_pred CCceEEEEEe-CC-chh-HHHHHHHHHcCCCCceEEEEeeCCC-CCCCcHHHH---HHHHcCCCEEEECCCCCchHHHHH
Q 024606 37 PKYKVAVLAS-KQ-EHC-LVDFLYGWQEGKLPVEITCVISNHD-RGPNSHVIR---FLERHGIPYHYLCAKENEREEELL 109 (265)
Q Consensus 37 ~~~rIav~~S-g~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~-~~~~~~v~~---~a~~~gIP~~~~~~~~~~~~~~l~ 109 (265)
.++||+|.|. |. |+. .+.|++. | ++|.++ +.+. ......-.+ .....|+.+...+- .+.+.+.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~---~d~~~l~ 72 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF---S---HPTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEM---EEHEKMV 72 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT---T---CCEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCT---TCHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC---C---CcEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecC---CCHHHHH
Confidence 3578888774 22 433 3444443 3 566544 3332 111111111 12346777765442 1235667
Q ss_pred HHhhCCCEEEEEe
Q 024606 110 ELVQNTDFLVLAR 122 (265)
Q Consensus 110 ~~l~~~D~vv~ag 122 (265)
+.++++|.||.+.
T Consensus 73 ~a~~~~d~vi~~a 85 (321)
T 3c1o_A 73 SVLKQVDIVISAL 85 (321)
T ss_dssp HHHTTCSEEEECC
T ss_pred HHHcCCCEEEECC
Confidence 7777899887654
No 231
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=32.36 E-value=91 Score=29.46 Aligned_cols=75 Identities=9% Similarity=0.081 Sum_probs=38.5
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++||+|+|+|. .-+.++.++.+.. .++| ++.+++ .....+++++.++.+..++- .+.+++.+.+.++|
T Consensus 22 ~~k~VlIiGAGg--iG~aia~~L~~~~-g~~V--~v~~R~---~~ka~~la~~~~~~~~~~D~---~d~~~l~~~l~~~D 90 (467)
T 2axq_A 22 MGKNVLLLGSGF--VAQPVIDTLAAND-DINV--TVACRT---LANAQALAKPSGSKAISLDV---TDDSALDKVLADND 90 (467)
T ss_dssp -CEEEEEECCST--THHHHHHHHHTST-TEEE--EEEESS---HHHHHHHHGGGTCEEEECCT---TCHHHHHHHHHTSS
T ss_pred CCCEEEEECChH--HHHHHHHHHHhCC-CCeE--EEEECC---HHHHHHHHHhcCCcEEEEec---CCHHHHHHHHcCCC
Confidence 457899998754 2233333333210 2454 344442 22344555555665544332 12245666667899
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+||.+.
T Consensus 91 vVIn~t 96 (467)
T 2axq_A 91 VVISLI 96 (467)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 988763
No 232
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=32.33 E-value=91 Score=28.84 Aligned_cols=88 Identities=8% Similarity=0.049 Sum_probs=49.5
Q ss_pred cccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHhCC-CEeEEEEEEecCccCCCCeeEEEEEecCCC---C
Q 024606 154 NMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDAGV-KLIGATSHFVTEELDAGPIIEQMVERVSHR---D 225 (265)
Q Consensus 154 ~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~G~-~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~---d 225 (265)
.+++..++++..+.+.+-+..| ||. ..+..++.+|. ...|.-|+.-....|. +.+ ...+-+.|. .
T Consensus 186 ~~li~~~~l~~mk~gailIN~s-----RG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~-~l~-~~nvi~TPHiag~ 258 (380)
T 2o4c_A 186 RHLLDEPRLAALRPGTWLVNAS-----RGAVVDNQALRRLLEGGADLEVALDVWEGEPQADP-ELA-ARCLIATPHIAGY 258 (380)
T ss_dssp TTSBCHHHHHTSCTTEEEEECS-----CGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCH-HHH-TTCSEECSSCTTC
T ss_pred hhhcCHHHHhhCCCCcEEEECC-----CCcccCHHHHHHHHHhCCCceEEeeeeccCCCCch-hhc-cCCEEEccccCcC
Confidence 3488889999999888777777 674 44667777775 3345555443332222 222 122233443 3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 226 NLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 226 t~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|.+.. ....+.+.+.+..+.+|.
T Consensus 259 t~e~~-----~~~~~~~~~nl~~~l~g~ 281 (380)
T 2o4c_A 259 SLEGK-----LRGTAQIYQAYCAWRGIA 281 (380)
T ss_dssp CHHHH-----HHHHHHHHHHHHHHHTCC
T ss_pred CHHHH-----HHHHHHHHHHHHHHHcCC
Confidence 43332 233445566666666665
No 233
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=32.29 E-value=1.3e+02 Score=25.17 Aligned_cols=75 Identities=13% Similarity=0.129 Sum_probs=37.3
Q ss_pred CceEEEEEeCC--chh-HHHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHH---HHHHcCCCEEEECCCCCchHHHHHH
Q 024606 38 KYKVAVLASKQ--EHC-LVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIR---FLERHGIPYHYLCAKENEREEELLE 110 (265)
Q Consensus 38 ~~rIav~~Sg~--g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~---~a~~~gIP~~~~~~~~~~~~~~l~~ 110 (265)
++||+|.|..+ |+. .+.|++. | ++|.++ +...... +..-.+ .....|+.+...+- .+.+.+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~l-~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~---~d~~~l~~ 73 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL---G---HPTFLL-VRESTASSNSEKAQLLESFKASGANIVHGSI---DDHASLVE 73 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT---T---CCEEEE-CCCCCTTTTHHHHHHHHHHHTTTCEEECCCT---TCHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC---C---CCEEEE-ECCcccccCHHHHHHHHHHHhCCCEEEEecc---CCHHHHHH
Confidence 57888887532 433 3444443 3 566543 3221111 111111 12345776654432 22356667
Q ss_pred HhhCCCEEEEEe
Q 024606 111 LVQNTDFLVLAR 122 (265)
Q Consensus 111 ~l~~~D~vv~ag 122 (265)
.++++|.||.+.
T Consensus 74 ~~~~~d~vi~~a 85 (308)
T 1qyc_A 74 AVKNVDVVISTV 85 (308)
T ss_dssp HHHTCSEEEECC
T ss_pred HHcCCCEEEECC
Confidence 777899888654
No 234
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=32.25 E-value=14 Score=33.25 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=21.4
Q ss_pred CCceEEEEE-eCC-chhHHHHHHHHHcCCCCceEEEEeeCC
Q 024606 37 PKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 37 ~~~rIav~~-Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
.++||+|.| +|. | +.+++++.+. ...++++++..+
T Consensus 20 ~~irV~V~Ga~GrMG---r~i~~~v~~~-~~~eLvg~vd~~ 56 (288)
T 3ijp_A 20 GSMRLTVVGANGRMG---RELITAIQRR-KDVELCAVLVRK 56 (288)
T ss_dssp -CEEEEESSTTSHHH---HHHHHHHHTC-SSEEEEEEBCCT
T ss_pred CCeEEEEECCCCHHH---HHHHHHHHhC-CCCEEEEEEecC
Confidence 568999987 554 4 3344443322 258999998765
No 235
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=31.92 E-value=37 Score=28.77 Aligned_cols=71 Identities=10% Similarity=0.052 Sum_probs=40.6
Q ss_pred CCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh-
Q 024606 35 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 113 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~- 113 (265)
.+..+||+++|.|.. -+++++...... ..++++++...++..+. .-.|+|+... +++.+.++
T Consensus 77 ~~~~~rV~IIGaG~~--G~~la~~~~~~~-g~~iVg~~D~dp~k~g~------~i~gv~V~~~--------~dl~ell~~ 139 (211)
T 2dt5_A 77 LNRKWGLCIVGMGRL--GSALADYPGFGE-SFELRGFFDVDPEKVGR------PVRGGVIEHV--------DLLPQRVPG 139 (211)
T ss_dssp TTSCEEEEEECCSHH--HHHHHHCSCCCS-SEEEEEEEESCTTTTTC------EETTEEEEEG--------GGHHHHSTT
T ss_pred cCCCCEEEEECccHH--HHHHHHhHhhcC-CcEEEEEEeCCHHHHhh------hhcCCeeecH--------HhHHHHHHc
Confidence 455689999887752 244444322234 68999999765332111 1236777532 12445554
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|.+++|-
T Consensus 140 ~ID~ViIA~ 148 (211)
T 2dt5_A 140 RIEIALLTV 148 (211)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEeC
Confidence 688888764
No 236
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=31.77 E-value=1.6e+02 Score=24.58 Aligned_cols=76 Identities=12% Similarity=0.133 Sum_probs=38.3
Q ss_pred CceEEEEEeCC--chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHH--HHHHHcCCCEEEECCCCCchHHHHHH
Q 024606 38 KYKVAVLASKQ--EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVI--RFLERHGIPYHYLCAKENEREEELLE 110 (265)
Q Consensus 38 ~~rIav~~Sg~--g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~--~~a~~~gIP~~~~~~~~~~~~~~l~~ 110 (265)
++||+|.|..+ |+. .+.|++. | ++|.++.-+...... .... +.....|+.+...+- .+.+.+.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~---~d~~~l~~ 72 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA---G---NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI---NDHETLVK 72 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH---T---CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT---TCHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhC---C---CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC---CCHHHHHH
Confidence 46788877532 433 3455543 4 566544322101111 1111 112346777765442 12356677
Q ss_pred HhhCCCEEEEEe
Q 024606 111 LVQNTDFLVLAR 122 (265)
Q Consensus 111 ~l~~~D~vv~ag 122 (265)
.++++|.||.+.
T Consensus 73 ~~~~~d~vi~~a 84 (307)
T 2gas_A 73 AIKQVDIVICAA 84 (307)
T ss_dssp HHTTCSEEEECS
T ss_pred HHhCCCEEEECC
Confidence 777899888654
No 237
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.76 E-value=64 Score=25.88 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=34.2
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
+|||.|.|..+ ..=..+.+.+.+. .++|.++.-+..+.... ..++.++..+- .+.+++.+.++++|.
T Consensus 4 m~~ilItGatG-~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl---~d~~~~~~~~~~~d~ 70 (227)
T 3dhn_A 4 VKKIVLIGASG-FVGSALLNEALNR--GFEVTAVVRHPEKIKIE-------NEHLKVKKADV---SSLDEVCEVCKGADA 70 (227)
T ss_dssp CCEEEEETCCH-HHHHHHHHHHHTT--TCEEEEECSCGGGCCCC-------CTTEEEECCCT---TCHHHHHHHHTTCSE
T ss_pred CCEEEEEcCCc-hHHHHHHHHHHHC--CCEEEEEEcCcccchhc-------cCceEEEEecC---CCHHHHHHHhcCCCE
Confidence 57887776432 1112333333222 36776554333211111 13444443321 234566777778998
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
||.+.
T Consensus 71 vi~~a 75 (227)
T 3dhn_A 71 VISAF 75 (227)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 87654
No 238
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=31.44 E-value=1e+02 Score=27.94 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=38.5
Q ss_pred CceEEEEEeCC-ch-hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc----CCCEEEECCCCCchHHHHHHH
Q 024606 38 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH----GIPYHYLCAKENEREEELLEL 111 (265)
Q Consensus 38 ~~rIav~~Sg~-g~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~----gIP~~~~~~~~~~~~~~l~~~ 111 (265)
..||+|+|+|. +. .+.+++.. .+ .+-+ .+.+++ .....+++++. |+++..+. ++.+.
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~--~~---~~~V-~V~~r~---~~~a~~la~~~~~~~g~~~~~~~--------~~~ea 191 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKH--LG---IEEI-VAYDTD---PLATAKLIANLKEYSGLTIRRAS--------SVAEA 191 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH--SC---CCEE-EEECSS---HHHHHHHHHHHTTCTTCEEEECS--------SHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHh--CC---CcEE-EEEcCC---HHHHHHHHHHHHhccCceEEEeC--------CHHHH
Confidence 47899999986 32 23444432 12 2323 344552 23456666664 66654432 12345
Q ss_pred hhCCCEEEEEec
Q 024606 112 VQNTDFLVLARY 123 (265)
Q Consensus 112 l~~~D~vv~ag~ 123 (265)
++++|+|+++--
T Consensus 192 v~~aDiVi~aTp 203 (350)
T 1x7d_A 192 VKGVDIITTVTA 203 (350)
T ss_dssp HTTCSEEEECCC
T ss_pred HhcCCEEEEecc
Confidence 568999998764
No 239
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=31.42 E-value=91 Score=27.13 Aligned_cols=19 Identities=26% Similarity=0.377 Sum_probs=12.9
Q ss_pred CceEEEEEeCC-chhHHHHH
Q 024606 38 KYKVAVLASKQ-EHCLVDFL 56 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll 56 (265)
+|||+|+|.|. |+.+...+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L 23 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYL 23 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHH
Confidence 37999999887 55444333
No 240
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=31.27 E-value=43 Score=29.81 Aligned_cols=15 Identities=27% Similarity=0.239 Sum_probs=11.0
Q ss_pred eEEEEEeCC-chhHHH
Q 024606 40 KVAVLASKQ-EHCLVD 54 (265)
Q Consensus 40 rIav~~Sg~-g~~l~~ 54 (265)
||+|+|.|. |+.+..
T Consensus 17 kI~iIG~G~mG~~la~ 32 (366)
T 1evy_A 17 KAVVFGSGAFGTALAM 32 (366)
T ss_dssp EEEEECCSHHHHHHHH
T ss_pred eEEEECCCHHHHHHHH
Confidence 999999887 554443
No 241
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=31.22 E-value=22 Score=29.97 Aligned_cols=63 Identities=22% Similarity=0.273 Sum_probs=33.5
Q ss_pred ceEEEEEeCC-chhHH-HHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 39 YKVAVLASKQ-EHCLV-DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~-~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
|||+|+|.|. |+.+. .|.++ |. ++|. +.+++ .....++++++|+.+. ... .+.+ ++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~---g~--~~v~--~~~r~---~~~~~~~~~~~g~~~~--~~~--------~~~~-~~D 59 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ---GG--YRIY--IANRG---AEKRERLEKELGVETS--ATL--------PELH-SDD 59 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CS--CEEE--EECSS---HHHHHHHHHHTCCEEE--SSC--------CCCC-TTS
T ss_pred CEEEEECchHHHHHHHHHHHHC---CC--CeEE--EECCC---HHHHHHHHHhcCCEEe--CCH--------HHHh-cCC
Confidence 6899999876 54443 33332 31 4553 33441 2334555566687543 211 1234 788
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++-
T Consensus 60 ~vi~~v 65 (263)
T 1yqg_A 60 VLILAV 65 (263)
T ss_dssp EEEECS
T ss_pred EEEEEe
Confidence 888764
No 242
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=31.16 E-value=72 Score=28.99 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=34.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
+|||+|+|.|. |..+...+.. .| ++|. +.+++ ..-.+.+.+.|+... ...+++.+....+|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~--~G---~~V~--v~dr~----~~~~~~l~~~g~~~~-------~s~~e~~~~a~~~D 83 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK--GG---HECV--VYDLN----VNAVQALEREGIAGA-------RSIEEFCAKLVKPR 83 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSC----HHHHHHHHTTTCBCC-------SSHHHHHHHSCSSC
T ss_pred CCEEEEECchHHHHHHHHHHHh--CC---CEEE--EEeCC----HHHHHHHHHCCCEEe-------CCHHHHHhcCCCCC
Confidence 37999999887 5555433322 23 5553 33442 122344445565421 11234444333569
Q ss_pred EEEEE
Q 024606 117 FLVLA 121 (265)
Q Consensus 117 ~vv~a 121 (265)
+|+++
T Consensus 84 vVi~~ 88 (358)
T 4e21_A 84 VVWLM 88 (358)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99876
No 243
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=30.99 E-value=50 Score=27.19 Aligned_cols=85 Identities=14% Similarity=0.098 Sum_probs=41.3
Q ss_pred CCCCceEEEEEeCCc--hh-HHHHHHHHHcC-CCCceEE--EEeeCCCCCCCcHHH-HHHHHcCCCEEEECCCCCchHHH
Q 024606 35 IDPKYKVAVLASKQE--HC-LVDFLYGWQEG-KLPVEIT--CVISNHDRGPNSHVI-RFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g--~~-l~~ll~~~~~~-~l~~~I~--~Vit~~~~~~~~~v~-~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
...++||.|+.+|+- |. .++++.....+ ....+|. ++-..+..+.+.... ..++++||++.....+ ...++
T Consensus 31 ~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~g~~~~~~a~~~l~~e~Gidis~h~sr-~l~~~- 108 (180)
T 4egs_A 31 GRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPEGFPASSEAVEVLKKEYGIDISDHRAK-SLREE- 108 (180)
T ss_dssp ---CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCTTCCCCHHHHHHHHHHHCCCCTTCCCC-BCCSH-
T ss_pred CCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcCCCCCChHHHHHHHHHcCcCcccCccc-ccChh-
Confidence 556799999999984 43 44566543221 1134443 322222112233333 4457899997421111 11111
Q ss_pred HHHHhhCCCEEEEEecC
Q 024606 108 LLELVQNTDFLVLARYM 124 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~ 124 (265)
.+.++|+|+...-.
T Consensus 109 ---d~~~~DlIi~Md~~ 122 (180)
T 4egs_A 109 ---DLKGADLVLAMAFS 122 (180)
T ss_dssp ---HHHHCSEEEESSHH
T ss_pred ---hCcCCCEEEEcCHH
Confidence 23368999987643
No 244
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=30.81 E-value=62 Score=29.69 Aligned_cols=37 Identities=24% Similarity=0.500 Sum_probs=27.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 78 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~ 78 (265)
.+||++|+ +|+.+..++..++. +..++++||+--|+.
T Consensus 4 ~~kIv~lg--GGtGl~~ll~gLk~--~~~~iTaIVtv~DDG 40 (332)
T 2ppv_A 4 QMNVVLIG--GGTGLSVLARGLRE--FPIDITAIVTVADNG 40 (332)
T ss_dssp CEEEEEEE--CHHHHHHHHHHHTT--SSEEEEEEECCCCCS
T ss_pred CCeEEEEc--CcccHHHHHHHHHh--CCCCeEEEEECCcCC
Confidence 47998887 35566777777643 368999999988765
No 245
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=30.75 E-value=91 Score=28.19 Aligned_cols=21 Identities=24% Similarity=0.181 Sum_probs=14.9
Q ss_pred CCceEEEEEeCC-chhHHHHHH
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLY 57 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~ 57 (265)
.+|||+|+|.|. |+.+...+.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La 49 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLA 49 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHH
T ss_pred cCCeEEEECccHHHHHHHHHHH
Confidence 458999999987 555554443
No 246
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=30.52 E-value=1.7e+02 Score=25.90 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=43.0
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh-
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 113 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~- 113 (265)
+..|-.++.+|. .....+++++. +.++ ||.+.-++.+ ..+-.+|+++|||++.++.+ ++|-+++.
T Consensus 118 ~~k~p~~lk~Gv----neVtKaIekgK--AqLV-VIA~DvdPielv~~LPaLCee~~VPY~~V~sK-----~~LG~avGr 185 (255)
T 4a17_F 118 ETKKPIVLKYGL----NHITTLIENKQ--AKLV-VIAHDVDPIELVIFLPQLCRKNDVPFAFVKGK-----AALGKLVNK 185 (255)
T ss_dssp CCCCCCCEEECH----HHHHHHHHTSC--CSEE-EEESCCSSTHHHHHHHHHHHHTTCCEEEESCH-----HHHHHHHTS
T ss_pred CCCCCceeecch----HHHHHHHHcCC--ceEE-EEeCCCChHHHHHHHHHHHHHcCCCEEEECCH-----HHHHHHhCC
Confidence 344444555554 33445555563 5664 4443322222 23568899999999988743 45555664
Q ss_pred -CCCEEEEEecC
Q 024606 114 -NTDFLVLARYM 124 (265)
Q Consensus 114 -~~D~vv~ag~~ 124 (265)
.+-.+++..++
T Consensus 186 Kt~s~Vaitdv~ 197 (255)
T 4a17_F 186 KTATAVALTEVR 197 (255)
T ss_dssp SCCSEEEECCCC
T ss_pred CcceEEEeeccC
Confidence 35666655554
No 247
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=30.43 E-value=1.4e+02 Score=26.06 Aligned_cols=13 Identities=15% Similarity=0.046 Sum_probs=8.6
Q ss_pred CCCCceEEEEEeC
Q 024606 35 IDPKYKVAVLASK 47 (265)
Q Consensus 35 ~~~~~rIav~~Sg 47 (265)
..+++|+.|+.-.
T Consensus 5 ~~~m~~~~vi~Np 17 (304)
T 3s40_A 5 KTKFEKVLLIVNP 17 (304)
T ss_dssp CCSCSSEEEEECT
T ss_pred cCCCCEEEEEECc
Confidence 3446788888763
No 248
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=30.22 E-value=1.2e+02 Score=27.39 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=58.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHH-HHhhCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL-ELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~-~~l~~~ 115 (265)
.+||+|+|.|. |..+...+.. .| ++|. +.+++ ....+.+.+.|+... . ..++.+ +...++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~--~G---~~V~--~~dr~----~~~~~~a~~~G~~~~--~-----~~~e~~~~a~~~a 69 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA--AN---HSVF--GYNRS----RSGAKSAVDEGFDVS--A-----DLEATLQRAAAED 69 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSC----HHHHHHHHHTTCCEE--S-----CHHHHHHHHHHTT
T ss_pred CCEEEEEeecHHHHHHHHHHHH--CC---CEEE--EEeCC----HHHHHHHHHcCCeee--C-----CHHHHHHhcccCC
Confidence 47899999886 5444333322 23 4553 34442 234566788898432 1 112333 233478
Q ss_pred CEEEEEecCCCCcchhhhhhh-hhhhhhhcccCcccccccccCChhHHhh----c-CCCeEEecCCCCCCCCCC
Q 024606 116 DFLVLARYMQPVPLQKEAYLG-YKLLESLSSKGSLTSYFNMILSGKFLRS----Y-GKDVINIHHGLLPSFKGG 183 (265)
Q Consensus 116 D~vv~ag~~~~ip~~~~~~~~-~~~~~~~~~~~~~s~y~~~il~~~il~~----~-~~~~iNiHpslLP~yRG~ 183 (265)
|+|+++- |+. +... .+.+..+.++..++.-.+ ++..+++. . ...++..||-.=|...|+
T Consensus 70 DlVilav-----P~~--~~~~vl~~l~~~~~~~iv~Dv~S--vk~~i~~~~~~~~~~~~~v~~HPmaG~e~sG~ 134 (341)
T 3ktd_A 70 ALIVLAV-----PMT--AIDSLLDAVHTHAPNNGFTDVVS--VKTAVYDAVKARNMQHRYVGSHPMAGTANSGW 134 (341)
T ss_dssp CEEEECS-----CHH--HHHHHHHHHHHHCTTCCEEECCS--CSHHHHHHHHHTTCGGGEECEEECCSCC-CCG
T ss_pred CEEEEeC-----CHH--HHHHHHHHHHccCCCCEEEEcCC--CChHHHHHHHHhCCCCcEecCCccccccccch
Confidence 9999874 322 1111 223344455555543332 12222221 1 134777788765655553
No 249
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=29.89 E-value=54 Score=27.97 Aligned_cols=63 Identities=10% Similarity=0.091 Sum_probs=32.4
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
|||+|+|.|. |+.+...+.. .| ++|. +.+++ ... .+.+.+.|+.+. . . ..+.++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~--~g---~~V~--~~~~~---~~~-~~~~~~~g~~~~--~-----~---~~~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMK--HG---YPLI--IYDVF---PDA-CKEFQDAGEQVV--S-----S---PADVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHH--TT---CCEE--EECSS---THH-HHHHHTTTCEEC--S-----S---HHHHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHH--CC---CEEE--EEeCC---HHH-HHHHHHcCCeec--C-----C---HHHHHhcCCE
Confidence 5899999887 5544433322 23 4553 33442 122 333445565421 1 1 1233447899
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++-
T Consensus 60 vi~~v 64 (296)
T 2gf2_A 60 IITML 64 (296)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 98873
No 250
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=29.86 E-value=21 Score=27.72 Aligned_cols=44 Identities=18% Similarity=0.356 Sum_probs=27.6
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCC-C--cHHHHHHHHcCCCEEEECCC
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGP-N--SHVIRFLERHGIPYHYLCAK 100 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~-~--~~v~~~a~~~gIP~~~~~~~ 100 (265)
.....++++|+ +.++ |+. +|-.+ . ..+..+|+++|||++.++.+
T Consensus 31 ~~v~kaI~~gk--a~LV-vIA-~D~~p~~i~~~l~~lC~~~~VP~~~v~sk 77 (113)
T 3jyw_G 31 NHVVALIENKK--AKLV-LIA-NDVDPIELVVFLPALCKKMGVPYAIVKGK 77 (113)
T ss_dssp HHHHHTTTTTC--CSEE-EEC-SCCSSHHHHTTHHHHHHHTTCCCEECSCS
T ss_pred HHHHHHHHcCC--ceEE-EEe-CCCCHHHHHHHHHHHHHHcCCCEEEECCH
Confidence 44566666664 5554 333 33222 1 44678999999999987754
No 251
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=29.55 E-value=1.2e+02 Score=26.35 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=39.4
Q ss_pred CceEEEEEeCC--chh-HHHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQ--EHC-LVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~--g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
++||+|.|..+ |+. ++.|++. | ++|.++.-+....+ .....+.....|+.+...+- .+.+++.+.++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~---g---~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl---~d~~~l~~~~~ 80 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA---H---RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI---NEQEAMEKILK 80 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT---T---CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT---TCHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC---C---CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec---CCHHHHHHHHh
Confidence 46888877533 333 2333332 3 57765544331110 01111223356777766442 13456777787
Q ss_pred --CCCEEEEEec
Q 024606 114 --NTDFLVLARY 123 (265)
Q Consensus 114 --~~D~vv~ag~ 123 (265)
++|.||.+..
T Consensus 81 ~~~~d~Vi~~a~ 92 (346)
T 3i6i_A 81 EHEIDIVVSTVG 92 (346)
T ss_dssp HTTCCEEEECCC
T ss_pred hCCCCEEEECCc
Confidence 8998886654
No 252
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=29.43 E-value=54 Score=25.79 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=31.0
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCC---cHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~---~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
....+++++|+ +.++ |++ .|-.+. ..+..+|+++|||++.+..+ +++=.++-
T Consensus 47 ~~v~kal~~gk--aklV-iiA-~D~~~~~~~~~l~~lc~~~~IP~~~v~sk-----~eLG~a~G 101 (135)
T 2aif_A 47 NEATKALNRGI--AEIV-LLA-ADAEPLEILLHLPLVCEDKNTPYVFVRSK-----VALGRACG 101 (135)
T ss_dssp HHHHHHHHTTC--EEEE-EEE-TTCSCHHHHHHHHHHHHHTTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHHHcCC--CeEE-EEe-cCCChHHHHhHHHHHHHhcCCcEEEECCH-----HHHHHHhC
Confidence 45566666663 4443 333 332232 45778899999999887532 45555553
No 253
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=29.27 E-value=38 Score=29.43 Aligned_cols=65 Identities=17% Similarity=0.152 Sum_probs=33.1
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.++||+|+|.|. |+.+...+.. .| ++|. +.+++ ..... .+.+.|+.+. . . ..+.+.++
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~--~g---~~V~--~~~~~---~~~~~-~~~~~g~~~~--~-----~---~~~~~~~~ 87 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLK--MG---HTVT--VWNRT---AEKCD-LFIQEGARLG--R-----T---PAEVVSTC 87 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---GGGGH-HHHHTTCEEC--S-----C---HHHHHHHC
T ss_pred CCCeEEEEcccHHHHHHHHHHHh--CC---CEEE--EEeCC---HHHHH-HHHHcCCEEc--C-----C---HHHHHhcC
Confidence 458999999876 5544333322 23 4553 33442 12223 3344565321 1 1 12334578
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 88 DvVi~av 94 (316)
T 2uyy_A 88 DITFACV 94 (316)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9998874
No 254
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=29.23 E-value=59 Score=30.66 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=35.2
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHH-H---cCCCEEEECCCCCchHHHHHHHh
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-R---HGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~-~---~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
+|||+|+|.|. |+++...+.. .| ++|. +.+++ ...+.++.+ + .|+.. .. .-+++.+.+
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~--~G---~~V~--v~dr~---~~~~~~l~~~~~~g~gi~~--~~-----~~~e~v~~l 64 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMND--HG---FVVC--AFNRT---VSKVDDFLANEAKGTKVLG--AH-----SLEEMVSKL 64 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---THHHHHHHHTTTTTSSCEE--CS-----SHHHHHHHB
T ss_pred CCeEEEEChHHHHHHHHHHHHH--CC---CeEE--EEeCC---HHHHHHHHhccccCCCeEE--eC-----CHHHHHhhc
Confidence 47999999887 6665544432 23 4553 33442 233444444 2 34421 11 123444444
Q ss_pred hCCCEEEEE
Q 024606 113 QNTDFLVLA 121 (265)
Q Consensus 113 ~~~D~vv~a 121 (265)
+++|+|+++
T Consensus 65 ~~aDvVila 73 (482)
T 2pgd_A 65 KKPRRIILL 73 (482)
T ss_dssp CSSCEEEEC
T ss_pred cCCCEEEEe
Confidence 589998875
No 255
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=29.16 E-value=69 Score=26.20 Aligned_cols=75 Identities=5% Similarity=0.038 Sum_probs=40.9
Q ss_pred CCCCceEEEEEeCCchhHHHHHHHHHc-CCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECC-CCCch--HHHHHH
Q 024606 35 IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENER--EEELLE 110 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g~~l~~ll~~~~~-~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~-~~~~~--~~~l~~ 110 (265)
..+++|++|+.+|..-. +.... |+. .+. +...+.+++++.|+.+..... .++.. .+.+.+
T Consensus 12 ~~~~~rv~IittGde~~-----~~~~~~G~i--------~Ds---n~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~ 75 (178)
T 2pjk_A 12 APKSLNFYVITISTSRY-----EKLLKKEPI--------VDE---SGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTD 75 (178)
T ss_dssp -CCCCEEEEEEECHHHH-----HHHHTTCCC--------CCH---HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccc-----cccccCCeE--------eeh---HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHH
Confidence 45678999999986321 23333 321 111 123467888999987654321 11110 123334
Q ss_pred HhhC--CCEEEEEecCC
Q 024606 111 LVQN--TDFLVLARYMQ 125 (265)
Q Consensus 111 ~l~~--~D~vv~ag~~~ 125 (265)
++.+ +|+|++.|=.-
T Consensus 76 a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 76 ALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHTCTTCCEEEEESCCS
T ss_pred HHhcCCCCEEEECCCCC
Confidence 4445 99999988543
No 256
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=29.16 E-value=1e+02 Score=26.15 Aligned_cols=70 Identities=14% Similarity=0.207 Sum_probs=41.2
Q ss_pred HHHHHHHcCCCE--EEECCCCCchHHHHHHHhh--CCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCC
Q 024606 83 VIRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILS 158 (265)
Q Consensus 83 v~~~a~~~gIP~--~~~~~~~~~~~~~l~~~l~--~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~ 158 (265)
+.++++++|++. ..+. . +...+++.+..+ ++|++|+..+++- .+.=.+-+=..
T Consensus 233 l~~~~~~~~~~~~~~~v~-~-g~~~~~I~~~a~~~~~dLiV~G~~g~~---------------------~~~~~~~Gsv~ 289 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVK-E-GLPEQVIPQVCEELNAGIVVLGILGRT---------------------GLSAAFLGNTA 289 (319)
T ss_dssp HHHHHHHTTCCGGGEEEE-E-SCHHHHHHHHHHHTTEEEEEEECCSCC---------------------STHHHHHHHHH
T ss_pred HHHHHHHhCCCcccEEEe-c-CCcHHHHHHHHHHhCCCEEEEeccCcc---------------------CCccccccHHH
Confidence 456778899862 1111 1 223567777776 7999999888761 00001111234
Q ss_pred hhHHhhcCCCeEEecCC
Q 024606 159 GKFLRSYGKDVINIHHG 175 (265)
Q Consensus 159 ~~il~~~~~~~iNiHps 175 (265)
..++...+..++-++|.
T Consensus 290 ~~vl~~~~~pVLvv~~~ 306 (319)
T 3olq_A 290 EQLIDHIKCDLLAIKPD 306 (319)
T ss_dssp HHHHTTCCSEEEEECCT
T ss_pred HHHHhhCCCCEEEECCC
Confidence 66777777778888764
No 257
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=29.13 E-value=1.5e+02 Score=28.92 Aligned_cols=72 Identities=14% Similarity=0.162 Sum_probs=37.8
Q ss_pred ceEEEEEeCC-chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 39 YKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 39 ~rIav~~Sg~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
+||+|+|.|. |.. ...|.++..+-....+| ++..+. +....+.|++.|+-.. +.. .. ++.+.++++|
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~V--iVg~r~---~sks~e~A~e~G~~v~--d~t-a~---s~aEAa~~AD 123 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVV--KIGLRK---GSKSFDEARAAGFTEE--SGT-LG---DIWETVSGSD 123 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEE--EEEECT---TCSCHHHHHHTTCCTT--TTC-EE---EHHHHHHHCS
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEE--EEEeCC---chhhHHHHHHCCCEEe--cCC-CC---CHHHHHhcCC
Confidence 7999999988 543 34454442211112344 233331 1223677888887531 000 00 1234555899
Q ss_pred EEEEE
Q 024606 117 FLVLA 121 (265)
Q Consensus 117 ~vv~a 121 (265)
+|+++
T Consensus 124 VVILa 128 (525)
T 3fr7_A 124 LVLLL 128 (525)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99885
No 258
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.01 E-value=77 Score=26.77 Aligned_cols=75 Identities=11% Similarity=0.133 Sum_probs=37.0
Q ss_pred CceEEEEEe-CC-chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHH---HHHcCCCEEEECCCCCchHHHHHHH
Q 024606 38 KYKVAVLAS-KQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRF---LERHGIPYHYLCAKENEREEELLEL 111 (265)
Q Consensus 38 ~~rIav~~S-g~-g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~---a~~~gIP~~~~~~~~~~~~~~l~~~ 111 (265)
++||+|.|. |. |+. .+.|++. | ++|.++.-+.. .....-.+. ....|+.+...+- .+.+.+.+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~D~---~d~~~l~~~ 73 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL---G---HPTYVLFRPEV-VSNIDKVQMLLYFKQLGAKLIEASL---DDHQRLVDA 73 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT---T---CCEEEECCSCC-SSCHHHHHHHHHHHTTTCEEECCCS---SCHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC---C---CcEEEEECCCc-ccchhHHHHHHHHHhCCeEEEeCCC---CCHHHHHHH
Confidence 578888874 33 433 3444443 3 56754433221 100111111 1245676654332 223566777
Q ss_pred hhCCCEEEEEe
Q 024606 112 VQNTDFLVLAR 122 (265)
Q Consensus 112 l~~~D~vv~ag 122 (265)
++++|.||.+.
T Consensus 74 ~~~~d~vi~~a 84 (313)
T 1qyd_A 74 LKQVDVVISAL 84 (313)
T ss_dssp HTTCSEEEECC
T ss_pred HhCCCEEEECC
Confidence 77899888654
No 259
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=28.91 E-value=41 Score=31.70 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=35.5
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc---CCCEEEECCCCCchHHHHHHHhh
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH---GIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~---gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
++||+|+|.|. |+++...+.. .| ++|. +.+++ ...+.++.+++ |+. ... .-+++.+.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~--~G---~~V~--v~dr~---~~~~~~l~~~~~~~gi~--~~~-----s~~e~v~~l~ 67 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES--RG---YTVA--IYNRT---TSKTEEVFKEHQDKNLV--FTK-----TLEEFVGSLE 67 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECSS---HHHHHHHHHHTTTSCEE--ECS-----SHHHHHHTBC
T ss_pred CCcEEEEeeHHHHHHHHHHHHh--CC---CEEE--EEcCC---HHHHHHHHHhCcCCCeE--EeC-----CHHHHHhhcc
Confidence 47999999887 6665443332 23 4553 34442 23345555554 432 111 1233433333
Q ss_pred CCCEEEEEe
Q 024606 114 NTDFLVLAR 122 (265)
Q Consensus 114 ~~D~vv~ag 122 (265)
++|+|+++-
T Consensus 68 ~aDvVilav 76 (474)
T 2iz1_A 68 KPRRIMLMV 76 (474)
T ss_dssp SSCEEEECC
T ss_pred CCCEEEEEc
Confidence 599998763
No 260
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.85 E-value=75 Score=25.49 Aligned_cols=71 Identities=11% Similarity=0.105 Sum_probs=34.8
Q ss_pred ceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCch-HHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER-EEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~-~~~l~~~l~~~D~ 117 (265)
|||.|.|..++ .=..+.+.+.+. .++|.++.-+.++.... .++.+...+- .+ .+++.+.++++|.
T Consensus 1 M~ilItGatG~-iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~--------~~~~~~~~D~---~d~~~~~~~~~~~~d~ 66 (219)
T 3dqp_A 1 MKIFIVGSTGR-VGKSLLKSLSTT--DYQIYAGARKVEQVPQY--------NNVKAVHFDV---DWTPEEMAKQLHGMDA 66 (219)
T ss_dssp CEEEEESTTSH-HHHHHHHHHTTS--SCEEEEEESSGGGSCCC--------TTEEEEECCT---TSCHHHHHTTTTTCSE
T ss_pred CeEEEECCCCH-HHHHHHHHHHHC--CCEEEEEECCccchhhc--------CCceEEEecc---cCCHHHHHHHHcCCCE
Confidence 57777764332 223333333222 36776554333211111 3555554432 22 3556666668998
Q ss_pred EEEEec
Q 024606 118 LVLARY 123 (265)
Q Consensus 118 vv~ag~ 123 (265)
||.+..
T Consensus 67 vi~~ag 72 (219)
T 3dqp_A 67 IINVSG 72 (219)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886554
No 261
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=28.75 E-value=99 Score=29.18 Aligned_cols=60 Identities=13% Similarity=0.106 Sum_probs=38.1
Q ss_pred CCCCceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCCC-cHHHHHHHHcCC-CEEEECC
Q 024606 35 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGI-PYHYLCA 99 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~-~~v~~~a~~~gI-P~~~~~~ 99 (265)
...+.||++..||+- +.+..++.. +| .+|.+|..+-....+ ..+.+.|++.|| |.+.++-
T Consensus 11 ~~~~~KVVVA~SGGlDSSv~a~~Lke--~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl 74 (421)
T 1vl2_A 11 HHMKEKVVLAYSGGLDTSVILKWLCE--KG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDL 74 (421)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEEC
T ss_pred ccccCCEEEEeCCcHHHHHHHHHHHH--CC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEec
Confidence 456789999999873 334444432 24 688887765432122 457899999999 8887763
No 262
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=28.32 E-value=37 Score=25.09 Aligned_cols=52 Identities=15% Similarity=0.233 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHHHHHHHcCCCEEEE-CCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYL-CAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~~~a~~~gIP~~~~-~~~~~~~~~~l~~~l~ 113 (265)
...++++++|+ +.++ |++ .|.+.+ ..+..+|+++|||++.+ .. .+++=.++-
T Consensus 22 ~~v~kai~~gk--a~lV-iiA-~D~~~~~~~~l~~~c~~~~vp~~~~~~s-----~~eLG~a~G 76 (101)
T 1w41_A 22 RKSIQYAKMGG--AKLI-IVA-RNARPDIKEDIEYYARLSGIPVYEFEGT-----SVELGTLLG 76 (101)
T ss_dssp HHHHHHHHHTC--CSEE-EEE-TTSCHHHHHHHHHHHHHHTCCEEEESSC-----HHHHHHHTT
T ss_pred HHHHHHHHcCC--CcEE-EEe-CCCCHHHHHHHHHHHHhcCCCEEEecCC-----HHHHHHHhC
Confidence 44556666664 4554 333 332222 45778899999998875 33 245656654
No 263
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=28.03 E-value=40 Score=31.95 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=36.0
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc---CCCEEEECCCCCchHHHHHHHh
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH---GIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~---gIP~~~~~~~~~~~~~~l~~~l 112 (265)
.++||+|+|.|. |+++...+.. .| ++|. +.++. ...+.++.+++ |+- ... ..+++.+.+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~--~G---~~V~--v~~r~---~~~~~~l~~~~~~~gi~--~~~-----s~~e~v~~l 76 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES--RG---YTVS--IFNRS---REKTEEVIAENPGKKLV--PYY-----TVKEFVESL 76 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT--TT---CCEE--EECSS---HHHHHHHHHHSTTSCEE--ECS-----SHHHHHHTB
T ss_pred CCCeEEEEccHHHHHHHHHHHHh--CC---CeEE--EEeCC---HHHHHHHHhhCCCCCeE--EeC-----CHHHHHhCC
Confidence 468899999987 6666544432 23 4553 34442 23445555554 432 111 113333333
Q ss_pred hCCCEEEEEe
Q 024606 113 QNTDFLVLAR 122 (265)
Q Consensus 113 ~~~D~vv~ag 122 (265)
+++|+|+++=
T Consensus 77 ~~aDvVil~V 86 (480)
T 2zyd_A 77 ETPRRILLMV 86 (480)
T ss_dssp CSSCEEEECS
T ss_pred CCCCEEEEEC
Confidence 3499998763
No 264
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=27.93 E-value=92 Score=27.43 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=35.2
Q ss_pred CCceEEEEEeCC-chhH-HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 37 PKYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l-~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
.|+||+|+|-|. |..+ ..|+++ | +++ .+-|+. ... .+...+.|.... + ...+..++
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~---G---~~v--~v~dr~---~~~-~~~l~~~Ga~~a--~--------s~~e~~~~ 59 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA---G---YLL--NVFDLV---QSA-VDGLVAAGASAA--R--------SARDAVQG 59 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT---T---CEE--EEECSS---HHH-HHHHHHTTCEEC--S--------SHHHHHTT
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC---C---CeE--EEEcCC---HHH-HHHHHHcCCEEc--C--------CHHHHHhc
Confidence 467999999988 7665 456554 4 555 344552 222 333445565322 1 12344557
Q ss_pred CCEEEEE
Q 024606 115 TDFLVLA 121 (265)
Q Consensus 115 ~D~vv~a 121 (265)
+|+|+++
T Consensus 60 ~dvv~~~ 66 (300)
T 3obb_A 60 ADVVISM 66 (300)
T ss_dssp CSEEEEC
T ss_pred CCceeec
Confidence 8888764
No 265
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=27.89 E-value=38 Score=25.96 Aligned_cols=43 Identities=12% Similarity=0.045 Sum_probs=26.2
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEE
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 97 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~ 97 (265)
...++++++|+ +.++.+-.+-+...-..+..+|+.++||++.+
T Consensus 32 ~~t~kai~~gk--akLVilA~D~~~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 32 KTVLKTLRSSL--GKLIILANNCPPLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp HHHHHHHHTTC--CSEEEECSCCCHHHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 45566677774 55543333221101244778899999999987
No 266
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=27.61 E-value=1.5e+02 Score=28.04 Aligned_cols=56 Identities=21% Similarity=0.124 Sum_probs=37.6
Q ss_pred ceEEEEEeCCc-h-hHHHHHHHHHcCCCCceEEEEeeCCCCCC-C--cHHHHHHHHcCCCEEEECC
Q 024606 39 YKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-N--SHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 39 ~rIav~~Sg~g-~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-~--~~v~~~a~~~gIP~~~~~~ 99 (265)
.|+++..||+- | .+..++... | .++.+|..++.-.. + ..+.++|+++|||+..++.
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~--g---~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~ 270 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA--G---VDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDA 270 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH--T---CEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHHc--C---CeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEEC
Confidence 68999999863 3 344455443 4 57777777653211 1 3478889999999988763
No 267
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=27.49 E-value=56 Score=28.56 Aligned_cols=64 Identities=13% Similarity=0.128 Sum_probs=34.0
Q ss_pred CCceEEEEEeCC-chhHH-HHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 37 PKYKVAVLASKQ-EHCLV-DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
.++||+|+|.|. |..+. .|.++ | ++|. +.+++ ... .+.+.+.|+... . .+.+.+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~---G---~~V~--~~dr~---~~~-~~~~~~~g~~~~--~--------~~~e~~~~ 65 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ---G---KRVA--IWNRS---PGK-AAALVAAGAHLC--E--------SVKAALSA 65 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT---T---CCEE--EECSS---HHH-HHHHHHHTCEEC--S--------SHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---C---CEEE--EEeCC---HHH-HHHHHHCCCeec--C--------CHHHHHhc
Confidence 458999999887 55443 33332 3 4553 33542 222 333344465321 1 12334457
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+++-
T Consensus 66 aDvVi~~v 73 (306)
T 3l6d_A 66 SPATIFVL 73 (306)
T ss_dssp SSEEEECC
T ss_pred CCEEEEEe
Confidence 89998864
No 268
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=27.16 E-value=41 Score=28.86 Aligned_cols=63 Identities=16% Similarity=0.115 Sum_probs=33.2
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
|||+|+|.|. |..+...+.. .| ++|. +.+++ ... .+.+.+.|+... . .+.+.++++|+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr~---~~~-~~~~~~~g~~~~--~--------~~~~~~~~aDv 60 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AG---CSVT--IWNRS---PEK-AEELAALGAERA--A--------TPCEVVESCPV 60 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSS---GGG-GHHHHHTTCEEC--S--------SHHHHHHHCSE
T ss_pred CEEEEEeecHHHHHHHHHHHH--CC---CeEE--EEcCC---HHH-HHHHHHCCCeec--C--------CHHHHHhcCCE
Confidence 7999999887 5544433322 23 5664 33442 122 333445566321 1 12234457899
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++-
T Consensus 61 vi~~v 65 (287)
T 3pef_A 61 TFAML 65 (287)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 88763
No 269
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=27.14 E-value=1.1e+02 Score=26.07 Aligned_cols=80 Identities=9% Similarity=-0.051 Sum_probs=34.0
Q ss_pred CCCCceEEEEEeCC--chhH-HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH
Q 024606 35 IDPKYKVAVLASKQ--EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 111 (265)
Q Consensus 35 ~~~~~rIav~~Sg~--g~~l-~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~ 111 (265)
..+++||.|.|..+ |+.+ +.|++ .| ++|.++.-+..+.....+.......++.+...+- .+.+.+.+.
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d~~~~~~~ 81 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLE---KG---YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM---ADACSVQRA 81 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCT---TCHHHHHHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHH---CC---CeEEEEeCCCccccccchhhccccCceEEEECCC---CCHHHHHHH
Confidence 66778887766433 2332 23333 23 6776554333211111111111122444444331 123456666
Q ss_pred hh--CCCEEEEEec
Q 024606 112 VQ--NTDFLVLARY 123 (265)
Q Consensus 112 l~--~~D~vv~ag~ 123 (265)
++ ++|.||-+..
T Consensus 82 ~~~~~~d~Vih~A~ 95 (335)
T 1rpn_A 82 VIKAQPQEVYNLAA 95 (335)
T ss_dssp HHHHCCSEEEECCS
T ss_pred HHHcCCCEEEECcc
Confidence 65 5898885543
No 270
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=27.12 E-value=84 Score=26.72 Aligned_cols=68 Identities=12% Similarity=-0.003 Sum_probs=33.9
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
++||+|+|.|. |+.+...+.. .|. ..+|. +.+++ ..-.+.+.+.|+........ .+.+.++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~--~g~-~~~V~--~~d~~----~~~~~~~~~~g~~~~~~~~~--------~~~~~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR--DHP-HYKIV--GYNRS----DRSRDIALERGIVDEATADF--------KVFAALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HCT-TSEEE--EECSS----HHHHHHHHHTTSCSEEESCT--------TTTGGGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHh--CCC-CcEEE--EEcCC----HHHHHHHHHcCCcccccCCH--------HHhhcCCC
Confidence 47999999887 5444333322 121 24553 33431 12234455577631111111 12345789
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++-
T Consensus 69 vVilav 74 (290)
T 3b1f_A 69 VIILAV 74 (290)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 998874
No 271
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=27.10 E-value=2.6e+02 Score=23.29 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=37.3
Q ss_pred CceEEEEEeCC--chh-HHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQ--EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~--g~~-l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
+++|.|.|..+ |+. .+.|++. | .++|.++.-++. ..-.+.....|+.+...+- .+.+.+.+.+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~---g--~~~V~~~~R~~~----~~~~~~l~~~~~~~~~~D~---~d~~~l~~~~~~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED---G--TFKVRVVTRNPR----KKAAKELRLQGAEVVQGDQ---DDQVIMELALNG 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH---C--SSEEEEEESCTT----SHHHHHHHHTTCEEEECCT---TCHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhc---C--CceEEEEEcCCC----CHHHHHHHHCCCEEEEecC---CCHHHHHHHHhc
Confidence 36777766533 333 3344433 4 257765543321 1111223346777665442 123556667778
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|.|+.+.
T Consensus 73 ~d~vi~~a 80 (299)
T 2wm3_A 73 AYATFIVT 80 (299)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 99888654
No 272
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=27.00 E-value=65 Score=27.48 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=12.2
Q ss_pred HHHHHHhhCCCEEEEEe
Q 024606 106 EELLELVQNTDFLVLAR 122 (265)
Q Consensus 106 ~~l~~~l~~~D~vv~ag 122 (265)
+.+.+.+.++|+||.+.
T Consensus 113 ~~~~~~~~~~DvVi~~~ 129 (249)
T 1jw9_B 113 AELAALIAEHDLVLDCT 129 (249)
T ss_dssp HHHHHHHHTSSEEEECC
T ss_pred hHHHHHHhCCCEEEEeC
Confidence 44555666999998775
No 273
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=26.95 E-value=1.2e+02 Score=28.80 Aligned_cols=50 Identities=6% Similarity=0.187 Sum_probs=29.7
Q ss_pred CCCCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc-C
Q 024606 34 DIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-G 91 (265)
Q Consensus 34 ~~~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~-g 91 (265)
+.++++||+++|.|. |. .++..+.+. ...++++|.... .....+.++++ |
T Consensus 19 ~~~k~IRVGIIGaG~iG~---~~~~~l~~~-~~veLvAV~D~~----~era~~~a~~~yG 70 (446)
T 3upl_A 19 ETGKPIRIGLIGAGEMGT---DIVTQVARM-QGIEVGALSARR----LPNTFKAIRTAYG 70 (446)
T ss_dssp HTTCCEEEEEECCSHHHH---HHHHHHTTS-SSEEEEEEECSS----THHHHHHHHHHHS
T ss_pred hcCCceEEEEECChHHHH---HHHHHHhhC-CCcEEEEEEeCC----HHHHHHHHHHhcC
Confidence 356779999999976 33 233333321 247888777543 23345566665 6
No 274
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=26.75 E-value=1.1e+02 Score=25.35 Aligned_cols=56 Identities=9% Similarity=0.067 Sum_probs=33.9
Q ss_pred CceEEEEEeCCc-h-hHHHHHHHHHcCCCCceEEEEeeCCCCCCC---cHHHHHHHHcCCC-EEEEC
Q 024606 38 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIP-YHYLC 98 (265)
Q Consensus 38 ~~rIav~~Sg~g-~-~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~---~~v~~~a~~~gIP-~~~~~ 98 (265)
+.|++|+.||+- | .+..++.. .+ .++.+|..+...... ..+.++|++.||| .+.++
T Consensus 2 ~~kvvv~lSGG~DS~~~l~ll~~--~~---~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~ 63 (232)
T 2pg3_A 2 MKRAVVVFSGGQDSTTCLIQALQ--DY---DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLD 63 (232)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEecCcHHHHHHHHHHHH--cC---CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 358999999863 3 23333332 23 467766555432111 2467889999999 77665
No 275
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=26.62 E-value=2.3e+02 Score=24.18 Aligned_cols=75 Identities=4% Similarity=-0.111 Sum_probs=37.5
Q ss_pred CceEEEEEeCC--chhH-HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHH-------cCCCEEEECCCCCchHHH
Q 024606 38 KYKVAVLASKQ--EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLER-------HGIPYHYLCAKENEREEE 107 (265)
Q Consensus 38 ~~rIav~~Sg~--g~~l-~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~-------~gIP~~~~~~~~~~~~~~ 107 (265)
++||.|.|..+ |+.+ +.|++. | ++|.++.-+.. ........... .++.+...+- .+.++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d~~~ 93 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL---N---QVVIGLDNFST--GHQYNLDEVKTLVSTEQWSRFCFIEGDI---RDLTT 93 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT---T---CEEEEEECCSS--CCHHHHHHHHHTSCHHHHTTEEEEECCT---TCHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC---C---CEEEEEeCCCC--CchhhhhhhhhccccccCCceEEEEccC---CCHHH
Confidence 36887776433 3333 333332 3 67765543322 11122222222 4666655432 12355
Q ss_pred HHHHhhCCCEEEEEec
Q 024606 108 LLELVQNTDFLVLARY 123 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~ 123 (265)
+.+.++++|.||-+..
T Consensus 94 ~~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhcCCCEEEECCc
Confidence 6666779999886554
No 276
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=26.42 E-value=43 Score=28.49 Aligned_cols=70 Identities=17% Similarity=0.204 Sum_probs=35.8
Q ss_pred CCCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 36 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 36 ~~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
+..+||+++|.|. |. +++........+.++++++...++..+. .-+|+|+... +++.+.+++
T Consensus 83 ~~~~rV~IIGAG~~G~---~La~~~~~~~~g~~iVg~~D~dp~k~g~------~i~gv~V~~~--------~dl~eli~~ 145 (215)
T 2vt3_A 83 DEMTDVILIGVGNLGT---AFLHYNFTKNNNTKISMAFDINESKIGT------EVGGVPVYNL--------DDLEQHVKD 145 (215)
T ss_dssp C---CEEEECCSHHHH---HHHHCC------CCEEEEEESCTTTTTC------EETTEEEEEG--------GGHHHHCSS
T ss_pred CCCCEEEEEccCHHHH---HHHHHHhcccCCcEEEEEEeCCHHHHHh------HhcCCeeech--------hhHHHHHHh
Confidence 4457899998876 33 3333211122257899999865432111 1246787642 125555653
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
.|.+++|-
T Consensus 146 ~D~ViIAv 153 (215)
T 2vt3_A 146 ESVAILTV 153 (215)
T ss_dssp CCEEEECS
T ss_pred CCEEEEec
Confidence 39988874
No 277
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=26.22 E-value=76 Score=29.83 Aligned_cols=59 Identities=14% Similarity=0.148 Sum_probs=36.2
Q ss_pred CCceEEEEEeCCchhHHHHH------HHHH--cC-CCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECC
Q 024606 37 PKYKVAVLASKQEHCLVDFL------YGWQ--EG-KLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll------~~~~--~~-~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~ 99 (265)
+..-+.|++|.+|+..+.+. +.+. .| .....+++ +|.+ .++++.+.|+++||+++.++.
T Consensus 115 ~~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~va-vT~~---~~s~L~~~a~~~Gi~~f~~~d 182 (415)
T 1zzg_A 115 PRKTLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLVV-TTDP---KEGPLRAFAEREGLKAFAIPK 182 (415)
T ss_dssp GGGEEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEEE-EECS---SSSHHHHHHHHHTCEEEECCT
T ss_pred CCCEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEEE-EeCC---CCChHHHHHHHhCCcEEEecc
Confidence 34458888999986433221 1111 12 11245654 4544 357899999999999888774
No 278
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=26.13 E-value=68 Score=25.80 Aligned_cols=44 Identities=11% Similarity=0.143 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCEEEECC-CCCch--HHHHHHHhh--CCCEEEEEecCC
Q 024606 82 HVIRFLERHGIPYHYLCA-KENER--EEELLELVQ--NTDFLVLARYMQ 125 (265)
Q Consensus 82 ~v~~~a~~~gIP~~~~~~-~~~~~--~~~l~~~l~--~~D~vv~ag~~~ 125 (265)
.+.+++++.|+.+..... .++.. .+.+.+++. ++|+|++.|=.-
T Consensus 35 ~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 83 (169)
T 1y5e_A 35 LLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTG 83 (169)
T ss_dssp HHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCS
T ss_pred HHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 466777888876543321 11111 134445555 689999998543
No 279
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.66 E-value=3.9e+02 Score=24.46 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=44.1
Q ss_pred CCCCceEEEEEeCCc-----hhHHHHHHH--HHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHH
Q 024606 35 IDPKYKVAVLASKQE-----HCLVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEE 107 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g-----~~l~~ll~~--~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 107 (265)
.+++|||+++.+.-. ..+..+++. +... .+++.++....+ ......+..+..+ ++..+.. ....+
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~---~~~~~ 273 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQP--DLQMHLFATSGD--DGSTLRTRLAQAS-TLHDVTA---LGHLA 273 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCT--TEEEEEEESSCC--CSCHHHHHHHHTS-EEEECTT---CCHHH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcc--cEEEEEEECCCC--CccHHHHHHHhcC-eEEECCC---CCHHH
Confidence 466899999987531 235566666 4332 478764443321 1233444556666 4433321 12356
Q ss_pred HHHHhh--CCCEEEEE
Q 024606 108 LLELVQ--NTDFLVLA 121 (265)
Q Consensus 108 l~~~l~--~~D~vv~a 121 (265)
+.+.++ ++|+|+..
T Consensus 274 l~~~i~~~~~Div~~~ 289 (568)
T 2vsy_A 274 TAKHIRHHGIDLLFDL 289 (568)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHhCCCCEEEEC
Confidence 677776 79999754
No 280
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=25.58 E-value=1.2e+02 Score=27.41 Aligned_cols=63 Identities=8% Similarity=0.125 Sum_probs=33.6
Q ss_pred chhHHHHHHHHHcCCCCceEEEEeeC-CCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCEEEE
Q 024606 49 EHCLVDFLYGWQEGKLPVEITCVISN-HDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVL 120 (265)
Q Consensus 49 g~~l~~ll~~~~~~~l~~~I~~Vit~-~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~vv~ 120 (265)
++.+..|..+.++|+ ..+| +++. ++...+..+.....+.|||+..+... .+-..++++|.|++
T Consensus 132 ~tv~~~l~~A~~~gk-~~~V--~v~EsrP~~qG~~la~~L~~~gI~vtli~Ds------a~~~~m~~vd~Viv 195 (315)
T 3ecs_A 132 RVVLRVLEAAVAAKK-RFSV--YVTESQPDLSGKKMAKALCHLNVPVTVVLDA------AVGYIMEKADLVIV 195 (315)
T ss_dssp HHHHHHHHHHHTTTC-CEEE--EEECCTTTTHHHHHHHHHHTTTCCEEEECGG------GHHHHGGGCSEEEE
T ss_pred HHHHHHHHHHHHcCC-eEEE--EEecCCCcchHHHHHHHHHHcCCCEEEEehh------HHHHHHHhCCEEEE
Confidence 445555666665664 3444 3332 22111233444556789999887631 23344557777754
No 281
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=25.52 E-value=1.4e+02 Score=25.42 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=35.2
Q ss_pred CCCceEEEEEeCC--chhH-HHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHh
Q 024606 36 DPKYKVAVLASKQ--EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 112 (265)
Q Consensus 36 ~~~~rIav~~Sg~--g~~l-~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l 112 (265)
.++|||.|.|..+ |+.+ +.|++ .| ++|.++.-+..+ . .++ ...++.+...+- .+.+.+.+.+
T Consensus 11 ~~~M~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~~---~--~~l-~~~~~~~~~~Dl---~d~~~~~~~~ 75 (342)
T 2x4g_A 11 GAHVKYAVLGATGLLGHHAARAIRA---AG---HDLVLIHRPSSQ---I--QRL-AYLEPECRVAEM---LDHAGLERAL 75 (342)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHH---TT---CEEEEEECTTSC---G--GGG-GGGCCEEEECCT---TCHHHHHHHT
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHH---CC---CEEEEEecChHh---h--hhh-ccCCeEEEEecC---CCHHHHHHHH
Confidence 3457887776433 3333 33333 23 677655433321 1 111 123666554432 1234566667
Q ss_pred hCCCEEEEEec
Q 024606 113 QNTDFLVLARY 123 (265)
Q Consensus 113 ~~~D~vv~ag~ 123 (265)
+++|.||-+..
T Consensus 76 ~~~d~vih~a~ 86 (342)
T 2x4g_A 76 RGLDGVIFSAG 86 (342)
T ss_dssp TTCSEEEEC--
T ss_pred cCCCEEEECCc
Confidence 78998886543
No 282
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=25.48 E-value=1.8e+02 Score=25.65 Aligned_cols=8 Identities=0% Similarity=0.198 Sum_probs=5.8
Q ss_pred ceEEEEEe
Q 024606 39 YKVAVLAS 46 (265)
Q Consensus 39 ~rIav~~S 46 (265)
+|++|+.-
T Consensus 25 ~~i~vI~N 32 (337)
T 2qv7_A 25 KRARIIYN 32 (337)
T ss_dssp EEEEEEEC
T ss_pred ceEEEEEC
Confidence 47888876
No 283
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=25.32 E-value=62 Score=29.71 Aligned_cols=38 Identities=29% Similarity=0.424 Sum_probs=22.8
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 78 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~ 78 (265)
+.+||++|+- |+.+..++..++. ...++++|||-.|+.
T Consensus 9 ~~~kIVvigG--GtGl~~ll~gLk~--~~~~iTaIVtvaDDG 46 (341)
T 2p0y_A 9 QRPKIVVIGG--GTGLPVVLNGLRK--QAVDITAVVTVADDG 46 (341)
T ss_dssp -CCEEEEECC--GGGHHHHHHHHHH--SSSEEEEECC-----
T ss_pred CCCeEEEECC--cccHHHHHHHHHh--CCCCeEEEEECCcCC
Confidence 3478988864 4556666666653 257899999988765
No 284
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=25.22 E-value=79 Score=28.26 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=15.1
Q ss_pred CCCCceEEEEEeCC-chhHHHHHH
Q 024606 35 IDPKYKVAVLASKQ-EHCLVDFLY 57 (265)
Q Consensus 35 ~~~~~rIav~~Sg~-g~~l~~ll~ 57 (265)
..+++||+|+|.|. |+.+..++.
T Consensus 6 ~~~~~kI~VIGaG~vG~~lA~~la 29 (331)
T 1pzg_A 6 VQRRKKVAMIGSGMIGGTMGYLCA 29 (331)
T ss_dssp CSCCCEEEEECCSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH
Confidence 34458999999876 555554443
No 285
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.19 E-value=1.8e+02 Score=25.56 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=19.8
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
++||+|+|.|.-.. ...+.++..- ..+++++|+...
T Consensus 25 ~~rvgiiG~G~ig~-~~~~~~l~~~-~~~~lvav~d~~ 60 (330)
T 4ew6_A 25 PINLAIVGVGKIVR-DQHLPSIAKN-ANFKLVATASRH 60 (330)
T ss_dssp CEEEEEECCSHHHH-HTHHHHHHHC-TTEEEEEEECSS
T ss_pred CceEEEEecCHHHH-HHHHHHHHhC-CCeEEEEEEeCC
Confidence 58999999876211 0122222221 147888887644
No 286
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=25.08 E-value=91 Score=26.27 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=32.8
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
|||+|+|.|. |+.+...+.. .| ++|.+ .+++ ..-.+.+.+.|++...... +.+. .++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~--~g---~~V~~--~~~~----~~~~~~~~~~g~~~~~~~~--------~~~~-~~~D~ 60 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR--RG---HYLIG--VSRQ----QSTCEKAVERQLVDEAGQD--------LSLL-QTAKI 60 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TT---CEEEE--ECSC----HHHHHHHHHTTSCSEEESC--------GGGG-TTCSE
T ss_pred CEEEEEcCcHHHHHHHHHHHH--CC---CEEEE--EECC----HHHHHHHHhCCCCccccCC--------HHHh-CCCCE
Confidence 6899999876 4444332222 23 46543 3431 1223445577875322211 1122 47899
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++-
T Consensus 61 vi~av 65 (279)
T 2f1k_A 61 IFLCT 65 (279)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 98874
No 287
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=24.68 E-value=2.4e+02 Score=24.36 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=21.3
Q ss_pred CCceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCC
Q 024606 37 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNH 75 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~ 75 (265)
+.|||.|+..+. || .+.+|.+++.+- .++|+ ++|..
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt-~~t~~ 59 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRAL--GHEVR-YATGG 59 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEE-EEECS
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHC--CCEEE-EEeCc
Confidence 348999887765 44 244555555432 37886 45543
No 288
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=24.65 E-value=52 Score=24.21 Aligned_cols=71 Identities=20% Similarity=0.245 Sum_probs=31.7
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH-hhCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~-l~~~ 115 (265)
+.||+|+|.|. |..+...+.. .| +++++ +... ..-.+.+++.|..+...+. .+.+.+.+. +.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g---~~v~~-~d~~-----~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MG---HEVLA-VDIN-----EEKVNAYASYATHAVIANA---TEENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCCEE-EESC-----HHHHHTTTTTCSEEEECCT---TCHHHHHTTTGGGC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CEEEE-EeCC-----HHHHHHHHHhCCEEEEeCC---CCHHHHHhcCCCCC
Confidence 35799988754 3333332222 23 45543 3322 1112223344655443221 122333332 3479
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+++.+.
T Consensus 72 d~vi~~~ 78 (144)
T 2hmt_A 72 EYVIVAI 78 (144)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9988654
No 289
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=24.55 E-value=72 Score=29.28 Aligned_cols=68 Identities=18% Similarity=0.276 Sum_probs=37.8
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCc-eEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~-~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
+..+|+|+|.|. |......+.+. | + +| +++++. .....++|++.|..+ ++. +++.+.+.+
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~--G---~~~V--~v~~r~---~~ra~~la~~~g~~~--~~~------~~l~~~l~~ 227 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDR--G---VRAV--LVANRT---YERAVELARDLGGEA--VRF------DELVDHLAR 227 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH--C---CSEE--EEECSS---HHHHHHHHHHHTCEE--CCG------GGHHHHHHT
T ss_pred cCCEEEEEChHHHHHHHHHHHHHC--C---CCEE--EEEeCC---HHHHHHHHHHcCCce--ecH------HhHHHHhcC
Confidence 457899999865 33333333332 3 3 55 344542 223446788888642 211 124445568
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+|+.+-
T Consensus 228 aDvVi~at 235 (404)
T 1gpj_A 228 SDVVVSAT 235 (404)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcc
Confidence 99999874
No 290
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=24.48 E-value=2.3e+02 Score=24.26 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=40.5
Q ss_pred ceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCE-EEECCC---CCch------HH
Q 024606 39 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAK---ENER------EE 106 (265)
Q Consensus 39 ~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~-~~~~~~---~~~~------~~ 106 (265)
|||.++..... ..+..|++++.+.. ++++..+++... .....+..+..|+++ ..++.. .+.. -.
T Consensus 1 mkIl~v~~~~~~~~~~~~l~~~L~~~g-~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQH---REMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILE 76 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHST-TCEEEEEECCSS---GGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHH
T ss_pred CeEEEEecccHHHHHHHHHHHHHHhCC-CCceEEEEcCCC---HHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHH
Confidence 68887643222 12456777765421 125554555431 112334555678765 333321 1110 12
Q ss_pred HHHHHhh--CCCEEEEEec
Q 024606 107 ELLELVQ--NTDFLVLARY 123 (265)
Q Consensus 107 ~l~~~l~--~~D~vv~ag~ 123 (265)
.+.+.++ +||+|++.+.
T Consensus 77 ~l~~~l~~~~pDvv~~~~~ 95 (384)
T 1vgv_A 77 GLKPILAEFKPDVVLVHGD 95 (384)
T ss_dssp HHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHhCCCEEEEeCC
Confidence 3444554 8999998763
No 291
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=24.26 E-value=3.4e+02 Score=24.40 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=24.9
Q ss_pred CCceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCE
Q 024606 37 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 94 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~ 94 (265)
+..||+|+|.|. |.....++.++ | ++| +++++.. .-.+.+++.|..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--G---a~V--~~~d~~~----~~~~~~~~~Ga~~ 218 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--G---AVV--MATDVRA----ATKEQVESLGGKF 218 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--T---CEE--EEECSCS----TTHHHHHHTTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--C---CEE--EEEeCCH----HHHHHHHHcCCeE
Confidence 457999999875 33333444432 3 554 3334321 1245566788654
No 292
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=24.17 E-value=91 Score=26.24 Aligned_cols=17 Identities=18% Similarity=0.038 Sum_probs=11.6
Q ss_pred CceEEEEEeCC-chhHHH
Q 024606 38 KYKVAVLASKQ-EHCLVD 54 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ 54 (265)
||||+|+|.|. |+.+..
T Consensus 1 M~~i~iiG~G~~G~~~a~ 18 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAG 18 (289)
T ss_dssp -CCEEEECCSTTHHHHHH
T ss_pred CCeEEEEcccHHHHHHHH
Confidence 47899999887 554443
No 293
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=24.09 E-value=2.3e+02 Score=25.59 Aligned_cols=110 Identities=12% Similarity=0.044 Sum_probs=61.0
Q ss_pred HHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----
Q 024606 108 LLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG---- 183 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~---- 183 (265)
+.++++++|+|+++--. -+ ...+++..+.++..+.+.+-+--| ||.
T Consensus 221 l~ell~~sDvV~l~~Pl-----t~--------------------~T~~li~~~~l~~mk~gailIN~a-----RG~~vde 270 (345)
T 4g2n_A 221 LDSLLGASDIFLIAAPG-----RP--------------------ELKGFLDHDRIAKIPEGAVVINIS-----RGDLIND 270 (345)
T ss_dssp HHHHHHTCSEEEECSCC-----CG--------------------GGTTCBCHHHHHHSCTTEEEEECS-----CGGGBCH
T ss_pred HHHHHhhCCEEEEecCC-----CH--------------------HHHHHhCHHHHhhCCCCcEEEECC-----CCchhCH
Confidence 44566699999876421 11 123488899999988876655555 664
Q ss_pred cHHHHHHHhCCC-EeEEEEEEecCccCCCCeeEEEEEecCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 184 KPAKQAFDAGVK-LIGATSHFVTEELDAGPIIEQMVERVSHRD---NLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 184 ~pi~~ai~~G~~-~~GvTvH~v~~~~D~G~II~Q~~~~I~~~d---t~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
..+..|+.+|.- ..|.-|+.-....| -+.+....+-+.|.- |.+.. +++ .+.+.+.+..+.+|+
T Consensus 271 ~aL~~aL~~g~i~gA~LDVf~~EP~~~-~pL~~~~nvilTPHia~~t~e~~-~~~----~~~~~~ni~~~l~g~ 338 (345)
T 4g2n_A 271 DALIEALRSKHLFAAGLDVFANEPAID-PRYRSLDNIFLTPHIGSATHETR-DAM----GWLLIQGIEALNQSD 338 (345)
T ss_dssp HHHHHHHHHTSEEEEEESCCTTTTSCC-TTGGGCTTEEECCSCTTCBHHHH-HHH----HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCceEEEecCCCCCCCCC-chHHhCCCEEEcCccCcCCHHHH-HHH----HHHHHHHHHHHHcCC
Confidence 456777888852 23444444333222 234433445555543 33322 222 334555666666665
No 294
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=23.96 E-value=2.1e+02 Score=25.17 Aligned_cols=8 Identities=0% Similarity=-0.056 Sum_probs=4.5
Q ss_pred ceEEEEEe
Q 024606 39 YKVAVLAS 46 (265)
Q Consensus 39 ~rIav~~S 46 (265)
+|++|++-
T Consensus 30 ~~~~vi~N 37 (332)
T 2bon_A 30 PASLLILN 37 (332)
T ss_dssp CCEEEEEC
T ss_pred ceEEEEEC
Confidence 45666554
No 295
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=23.59 E-value=2.2e+02 Score=25.53 Aligned_cols=157 Identities=13% Similarity=0.112 Sum_probs=80.0
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.++ ..+|. +.++.. .. +.+.+.|+.. . ++.++++++|
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-----G~~V~--~~d~~~---~~--~~~~~~g~~~---~--------~l~ell~~aD 221 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-----GMKTI--GYDPII---SP--EVSASFGVQQ---L--------PLEEIWPLCD 221 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TCEEE--EECSSS---CH--HHHHHTTCEE---C--------CHHHHGGGCS
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-----CCEEE--EECCCc---ch--hhhhhcCcee---C--------CHHHHHhcCC
Confidence 46899999887 54444444432 35653 333321 12 3567778632 1 1335666899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----cHHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG----KPAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~----~pi~~ai~~ 192 (265)
+|+++--.. + ...+++..+.++..+.+.+-+--| ||. ..+..++.+
T Consensus 222 vV~l~~P~t-----~--------------------~t~~li~~~~l~~mk~gailIN~a-----rg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 222 FITVHTPLL-----P--------------------STTGLLNDNTFAQCKKGVRVVNCA-----RGGIVDEGALLRALQS 271 (335)
T ss_dssp EEEECCCCC-----T--------------------TTTTSBCHHHHTTSCTTEEEEECS-----CTTSBCHHHHHHHHHH
T ss_pred EEEEecCCC-----H--------------------HHHHhhCHHHHhhCCCCcEEEECC-----CccccCHHHHHHHHHh
Confidence 999863211 1 123377788888887765444333 353 356777777
Q ss_pred CCCEeEEEEEEecCc-cCCCCeeEEEEEecCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 193 GVKLIGATSHFVTEE-LDAGPIIEQMVERVSHRD---NLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 193 G~~~~GvTvH~v~~~-~D~G~II~Q~~~~I~~~d---t~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
|. ..|+-+-....+ ...-+.+....+-+.|.. |.+. .+++ .+.+.+.+..+.+|+
T Consensus 272 g~-i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~-~~~~----~~~~~~nl~~~~~g~ 330 (335)
T 2g76_A 272 GQ-CAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEA-QSRC----GEEIAVQFVDMVKGK 330 (335)
T ss_dssp TS-EEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHH-HHHH----HHHHHHHHHHHC---
T ss_pred CC-ccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHH-HHHH----HHHHHHHHHHHHcCC
Confidence 74 444444444333 222344433444455543 3332 2232 334445555555553
No 296
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.44 E-value=1.3e+02 Score=24.10 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=12.8
Q ss_pred HHHHHHHhhCCCEEEEEe
Q 024606 105 EEELLELVQNTDFLVLAR 122 (265)
Q Consensus 105 ~~~l~~~l~~~D~vv~ag 122 (265)
.+++.+.++++|++|.+.
T Consensus 64 ~~~~~~~~~~~d~vv~~a 81 (221)
T 3r6d_A 64 PGXLEQAVTNAEVVFVGA 81 (221)
T ss_dssp HHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHHcCCCEEEEcC
Confidence 456667777899988554
No 297
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=23.01 E-value=51 Score=29.03 Aligned_cols=68 Identities=26% Similarity=0.314 Sum_probs=34.5
Q ss_pred CceEEEEEeCC-chhHH-HHHHHHHcCCCC-ceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 38 KYKVAVLASKQ-EHCLV-DFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~-~ll~~~~~~~l~-~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
+|||+|+|.|. |+.+. .|.++ |..+ ++|. +.+++ ....-.+.+++.|+.+. .. ..+.+++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~---G~~~~~~V~--v~~r~--~~~~~~~~l~~~G~~~~--~~--------~~e~~~~ 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA---GVLAAHKIM--ASSPD--MDLATVSALRKMGVKLT--PH--------NKETVQH 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT---TSSCGGGEE--EECSC--TTSHHHHHHHHHTCEEE--SC--------HHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCCCcceEE--EECCC--ccHHHHHHHHHcCCEEe--CC--------hHHHhcc
Confidence 47899999887 55443 33332 4222 4653 33442 11012333456686532 11 1223447
Q ss_pred CCEEEEEe
Q 024606 115 TDFLVLAR 122 (265)
Q Consensus 115 ~D~vv~ag 122 (265)
+|+||++=
T Consensus 85 aDvVilav 92 (322)
T 2izz_A 85 SDVLFLAV 92 (322)
T ss_dssp CSEEEECS
T ss_pred CCEEEEEe
Confidence 89998874
No 298
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=22.90 E-value=1.5e+02 Score=26.67 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=62.4
Q ss_pred HHHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC---
Q 024606 107 ELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG--- 183 (265)
Q Consensus 107 ~l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~--- 183 (265)
++.++++++|+|+++--.- -..++++..+.++..+.+.+-+--| ||.
T Consensus 187 ~l~ell~~aDvV~l~lPlt-------------------------~~T~~li~~~~l~~mk~gailIN~a-----RG~~vd 236 (324)
T 3hg7_A 187 ALNKMLAQADVIVSVLPAT-------------------------RETHHLFTASRFEHCKPGAILFNVG-----RGNAIN 236 (324)
T ss_dssp GHHHHHHTCSEEEECCCCC-------------------------SSSTTSBCTTTTTCSCTTCEEEECS-----CGGGBC
T ss_pred CHHHHHhhCCEEEEeCCCC-------------------------HHHHHHhHHHHHhcCCCCcEEEECC-----CchhhC
Confidence 4556677999998864211 1123477778888777665555544 664
Q ss_pred -cHHHHHHHhCCC-EeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCe
Q 024606 184 -KPAKQAFDAGVK-LIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 254 (265)
Q Consensus 184 -~pi~~ai~~G~~-~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~~ 254 (265)
..+..|+.+|.- ..|.-|+.-..--..-+.+....+-+.|.-...+..++ ..+.+.+.+..+.+|+-
T Consensus 237 e~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~----~~~~~~~nl~~~~~G~~ 305 (324)
T 3hg7_A 237 EGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFPDD----VAQIFVRNYIRFIDGQP 305 (324)
T ss_dssp HHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCHHH----HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHHHH----HHHHHHHHHHHHHcCCC
Confidence 446677777753 34555554443222234443334444543222121122 34556677777777753
No 299
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=22.77 E-value=3.4e+02 Score=23.98 Aligned_cols=66 Identities=20% Similarity=0.164 Sum_probs=35.4
Q ss_pred HHHhhCCCEEEEEecCCCCcch-hhhhhhhhhhhhhcccCcccccccccCChhHHhhcC--CCeEEecCCCCC
Q 024606 109 LELVQNTDFLVLARYMQPVPLQ-KEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYG--KDVINIHHGLLP 178 (265)
Q Consensus 109 ~~~l~~~D~vv~ag~~~~ip~~-~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~--~~~iNiHpslLP 178 (265)
.+.++++|+|+.+-.-. ++ +.... .++.+.+.++.++..-.+.+....+-+..+ .+++..||=-.|
T Consensus 82 ~eav~~aDlVieavpe~---~~~k~~v~-~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~ 150 (319)
T 2dpo_A 82 AEAVEGVVHIQECVPEN---LDLKRKIF-AQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPP 150 (319)
T ss_dssp HHHTTTEEEEEECCCSC---HHHHHHHH-HHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSST
T ss_pred HHHHhcCCEEEEeccCC---HHHHHHHH-HHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCch
Confidence 34566899999886321 00 01111 123334566776654445554444444433 358999997644
No 300
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=22.49 E-value=2.6e+02 Score=21.35 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=44.5
Q ss_pred CCCceEEEEEeCCc-hhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHH--HcCCC--EEEECCCCCchHHHHHH
Q 024606 36 DPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE--RHGIP--YHYLCAKENEREEELLE 110 (265)
Q Consensus 36 ~~~~rIav~~Sg~g-~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~--~~gIP--~~~~~~~~~~~~~~l~~ 110 (265)
..+..|+++|.-.. -++..+++++..- .+.++. ++...+ ....+.+.++ +.|++ +..... ...+++.+
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~l~-i~G~~~--~~~~l~~~~~~~~~~l~~~v~~~g~---~~~~e~~~ 93 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL-QDEKLY-IVGWFS--KGDHAERYARKIMKIAPDNVKFLGS---VSEEELID 93 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC-TTSCEE-EEBCCC--TTSTHHHHHHHHHHHSCTTEEEEES---CCHHHHHH
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC-CCcEEE-EEecCc--cHHHHHHHHHhhhcccCCcEEEeCC---CCHHHHHH
Confidence 34455666555332 3567777776542 134443 233221 2245778887 66663 444332 23467888
Q ss_pred HhhCCCEEEEEe
Q 024606 111 LVQNTDFLVLAR 122 (265)
Q Consensus 111 ~l~~~D~vv~ag 122 (265)
.+..+|++|+..
T Consensus 94 ~~~~adi~v~ps 105 (177)
T 2f9f_A 94 LYSRCKGLLCTA 105 (177)
T ss_dssp HHHHCSEEEECC
T ss_pred HHHhCCEEEeCC
Confidence 888999988644
No 301
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=22.45 E-value=39 Score=29.45 Aligned_cols=39 Identities=3% Similarity=0.089 Sum_probs=20.5
Q ss_pred CCCCCceEEEEEeC-----Cch--hHHHHHHHHHcCCCCceEEEEeeC
Q 024606 34 DIDPKYKVAVLASK-----QEH--CLVDFLYGWQEGKLPVEITCVISN 74 (265)
Q Consensus 34 ~~~~~~rIav~~Sg-----~g~--~l~~ll~~~~~~~l~~~I~~Vit~ 74 (265)
..+.||||+++... +|. .+..+.+++.+. .++|..+...
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~ 61 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPA 61 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecC
Confidence 45668999999863 232 355666666542 3677644443
No 302
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=22.41 E-value=50 Score=24.89 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHHHHHHHcCCCEEEE-CCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYL-CAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~~~a~~~gIP~~~~-~~~~~~~~~~l~~~l~ 113 (265)
...++++++|+ +.++ |-..|-+.+ ..+..+|+++|||++.+ .. .++|=.++-
T Consensus 27 ~~v~kai~~gk--a~lV--iiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~s-----k~eLG~a~G 81 (110)
T 3cpq_A 27 KRTIKFVKHGE--GKLV--VLAGNIPKDLEEDVKYYAKLSNIPVYQHKIT-----SLELGAVCG 81 (110)
T ss_dssp HHHHHHHHTTC--CSEE--EECTTCBHHHHHHHHHHHHHTTCCEEECCSC-----HHHHHHHTT
T ss_pred HHHHHHHHcCC--ceEE--EEeCCCCHHHHHHHHHHHHHcCCCEEEEcCC-----HHHHHHHhC
Confidence 45566666664 4543 333332221 44778899999998876 32 245655554
No 303
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=22.39 E-value=2.9e+02 Score=23.93 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=13.5
Q ss_pred CceEEEEEeCC-chhHHHHH
Q 024606 38 KYKVAVLASKQ-EHCLVDFL 56 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll 56 (265)
+|||+|+|.|. |+.+...+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l 27 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIV 27 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHH
Confidence 47999999987 55554433
No 304
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=22.37 E-value=1.1e+02 Score=27.46 Aligned_cols=57 Identities=11% Similarity=0.180 Sum_probs=34.1
Q ss_pred CCCCCceEEEEEeCC-ch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECC
Q 024606 34 DIDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 34 ~~~~~~rIav~~Sg~-g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~ 99 (265)
....+|||++++.+. |+ .+.+|.+++.+. .++|.. ++.. ...+..++.|++++.++.
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~--GheV~~-~~~~------~~~~~v~~~G~~~~~i~~ 75 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAA--GHEVRV-VASP------ALTEDITAAGLTAVPVGT 75 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHT--TCEEEE-EECG------GGHHHHHTTTCCEEECSC
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHC--CCeEEE-EeCc------hhHHHHHhCCCceeecCC
Confidence 355678999986655 33 345666666542 378764 4433 125667788999887653
No 305
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=22.35 E-value=2e+02 Score=27.36 Aligned_cols=114 Identities=15% Similarity=0.142 Sum_probs=63.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
.++|+|+|.|. |..+...+.+. ..+|. +.++.. . .+.+.+.|+... + +.+.++++|
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-----G~~V~--~~d~~~---~--~~~a~~~g~~~~--~---------l~e~~~~aD 198 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-----GAYVV--AYDPYV---S--PARAAQLGIELL--S---------LDDLLARAD 198 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TCEEE--EECTTS---C--HHHHHHHTCEEC--C---------HHHHHHHCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CCEEE--EECCCC---C--hhHHHhcCcEEc--C---------HHHHHhcCC
Confidence 47899999887 44444333332 35653 334421 1 344677786421 1 234555899
Q ss_pred EEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCc----HHHHHHHh
Q 024606 117 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK----PAKQAFDA 192 (265)
Q Consensus 117 ~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~~----pi~~ai~~ 192 (265)
+|+++--. .+ ...+++..++++..+.+.+-+.-| ||.- .+..++.+
T Consensus 199 vV~l~~P~-----~~--------------------~t~~~i~~~~~~~~k~g~ilin~a-----rg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 199 FISVHLPK-----TP--------------------ETAGLIDKEALAKTKPGVIIVNAA-----RGGLVDEAALADAITG 248 (529)
T ss_dssp EEEECCCC-----ST--------------------TTTTCBCHHHHTTSCTTEEEEECS-----CTTSBCHHHHHHHHHT
T ss_pred EEEECCCC-----ch--------------------HHHHHhCHHHHhCCCCCCEEEECC-----CCchhhHHHHHHHHHc
Confidence 99987421 10 122377777888777776666666 6642 24456666
Q ss_pred CCCEeEEEEEEec
Q 024606 193 GVKLIGATSHFVT 205 (265)
Q Consensus 193 G~~~~GvTvH~v~ 205 (265)
| ...|+-+.++.
T Consensus 249 g-~i~ga~lDv~~ 260 (529)
T 1ygy_A 249 G-HVRAAGLDVFA 260 (529)
T ss_dssp S-SEEEEEESSCS
T ss_pred C-CccEEEEeecc
Confidence 5 34555555444
No 306
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=22.34 E-value=1.1e+02 Score=27.25 Aligned_cols=77 Identities=12% Similarity=0.035 Sum_probs=45.5
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHc-------CCCEEEEC-CCCCchHHHH
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-------GIPYHYLC-AKENEREEEL 108 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~-------gIP~~~~~-~~~~~~~~~l 108 (265)
...|++++.|| -=...+..-..+.| .++.++..+-.......+.++|+.. +||+++++ - + +.
T Consensus 178 ~~~kvlvllSG-vDS~vaa~ll~~~G---~~v~~v~~~~~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~~----~--~~ 247 (307)
T 1vbk_A 178 TEGRMIGILHD-ELSALAIFLMMKRG---VEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAESF----D--RV 247 (307)
T ss_dssp TTCEEEEECSS-HHHHHHHHHHHHBT---CEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESSH----H--HH
T ss_pred CCCcEEEEEeC-CcHHHHHHHHHhCC---CeEEEEEEEECHHHHHHHHHHHHHHhhhccCCCCcEEEeCCC----H--HH
Confidence 34699999999 52222222233445 7888888773110112367777776 89999886 2 1 11
Q ss_pred HHHhh--CCCEEEEEec
Q 024606 109 LELVQ--NTDFLVLARY 123 (265)
Q Consensus 109 ~~~l~--~~D~vv~ag~ 123 (265)
.+..+ ++|.++...+
T Consensus 248 ~~~A~~~ga~~I~tG~~ 264 (307)
T 1vbk_A 248 LKLIRDFGVKGVIKGLR 264 (307)
T ss_dssp HHHHHHHTCCEEECCCC
T ss_pred HHHHHHcCCCEEEECcc
Confidence 13322 8999876654
No 307
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=22.32 E-value=4.3e+02 Score=23.71 Aligned_cols=82 Identities=21% Similarity=0.224 Sum_probs=42.6
Q ss_pred CceEEEEEeCCc---hhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCC-CEEEEC---CCCCchH-----
Q 024606 38 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLC---AKENERE----- 105 (265)
Q Consensus 38 ~~rIav~~Sg~g---~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gI-P~~~~~---~~~~~~~----- 105 (265)
||||++++ |.- ..+..|+.++++..-..++..++|.... + -..+..+..|| |-+.+. ...+...
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~--~-m~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~ 102 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHR--E-MLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRV 102 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC--------CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHH
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcH--H-HHHHHHHhcCCCCCcccccCCCCCCHHHHHHHH
Confidence 35887765 432 2466788887653103676667776421 1 12445578898 423322 1111111
Q ss_pred -HHHHHHhh--CCCEEEEEec
Q 024606 106 -EELLELVQ--NTDFLVLARY 123 (265)
Q Consensus 106 -~~l~~~l~--~~D~vv~ag~ 123 (265)
.++.+.++ +||+|++.|.
T Consensus 103 ~~~l~~~l~~~kPD~Vi~~gd 123 (403)
T 3ot5_A 103 MNGINEVIAAENPDIVLVHGD 123 (403)
T ss_dssp HHHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHHcCCCEEEEECC
Confidence 23344444 8999998874
No 308
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.23 E-value=1.9e+02 Score=22.67 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=45.3
Q ss_pred EEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchH--HHHHHHhhCCCEE
Q 024606 41 VAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENERE--EELLELVQNTDFL 118 (265)
Q Consensus 41 Iav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~--~~l~~~l~~~D~v 118 (265)
|-+..|.....|..+...++.. ...++.+.++.+....-.-++--++.|+.+..+..++.-++ .++-+...+.|++
T Consensus 4 ifvvfssdpeilkeivreikrq--gvrvvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvv 81 (162)
T 2l82_A 4 IFVVFSSDPEILKEIVREIKRQ--GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVV 81 (162)
T ss_dssp EEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEE
T ss_pred EEEEecCCHHHHHHHHHHHHhC--CeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEE
Confidence 4444455556677777766543 37888888877532111122334567888887654321111 1222222277988
Q ss_pred EEEecC
Q 024606 119 VLARYM 124 (265)
Q Consensus 119 v~ag~~ 124 (265)
|+..--
T Consensus 82 vivttd 87 (162)
T 2l82_A 82 VIVTTD 87 (162)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 877643
No 309
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=22.12 E-value=1.3e+02 Score=23.90 Aligned_cols=40 Identities=28% Similarity=0.417 Sum_probs=25.6
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCC--CC----CC-cHHHHHHHHcCCCEEE
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHD--RG----PN-SHVIRFLERHGIPYHY 96 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~--~~----~~-~~v~~~a~~~gIP~~~ 96 (265)
..+.+.+.+| +|..||--++ .. ++ ..+.+.|..+|||+..
T Consensus 64 p~I~d~I~~g----eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 64 QQMGARVAEG----RILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HHHHHHHHTT----CEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred chHHHHHHCC----CccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 3466667666 4555655443 11 12 4488889999999974
No 310
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=22.10 E-value=2.2e+02 Score=25.14 Aligned_cols=64 Identities=17% Similarity=0.244 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCCCC--cHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh--CCCEEEEEecC
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYM 124 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~~~--~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~--~~D~vv~ag~~ 124 (265)
..+..+++++. +.++ ||++.-++.+ ..+-.+|+++|||++.++.+ ++|=.++. .+..+++..+.
T Consensus 133 neVTklVE~kK--AqLV-VIA~DVdPiElV~fLPaLC~k~gVPY~iVk~K-----arLG~~vgrKtct~Va~t~v~ 200 (258)
T 3iz5_H 133 NHVTYLIEQSK--AQLV-VIAHDVDPIELVVWLPALCRKMEVPYCIVKGK-----ARLGSIVHKKTASVLCLTTVK 200 (258)
T ss_dssp HHHHHHHHTTC--EEEE-EEESCCSSTHHHHHHHHHHTTTTCCEEEESCH-----HHHHHHTTCSSCCSEEEEESC
T ss_pred HHHHHHHHcCc--ceEE-EEeCCCChHHHHhHHHHHHHhcCCCeEEECCH-----HHHHHHhCCccceEEEEEecC
Confidence 34444555553 5553 5654433322 34678899999999988743 34555554 35555555554
No 311
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=22.07 E-value=61 Score=27.14 Aligned_cols=63 Identities=21% Similarity=0.228 Sum_probs=32.5
Q ss_pred ceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCCE
Q 024606 39 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 117 (265)
Q Consensus 39 ~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D~ 117 (265)
|||+|+|.|. |+.+...+.. .| ++|.+ .++. ......+.+.+.|+. .. . + +.+.++|+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~--~g---~~V~~--~~~~--~~~~~~~~~~~~g~~----~~---~--~---~~~~~aDv 59 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRS--RG---VEVVT--SLEG--RSPSTIERARTVGVT----ET---S--E---EDVYSCPV 59 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TT---CEEEE--CCTT--CCHHHHHHHHHHTCE----EC---C--H---HHHHTSSE
T ss_pred CeEEEEechHHHHHHHHHHHH--CC---CeEEE--eCCc--cCHHHHHHHHHCCCc----CC---H--H---HHHhcCCE
Confidence 5899998876 5544433322 23 56643 3331 122223444445764 11 1 1 23458999
Q ss_pred EEEEe
Q 024606 118 LVLAR 122 (265)
Q Consensus 118 vv~ag 122 (265)
|+++-
T Consensus 60 vi~~v 64 (264)
T 1i36_A 60 VISAV 64 (264)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 98864
No 312
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.83 E-value=1.6e+02 Score=26.19 Aligned_cols=54 Identities=17% Similarity=0.185 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCCCceEEEEeeCCCCC-CCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh
Q 024606 53 VDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 113 (265)
Q Consensus 53 ~~ll~~~~~~~l~~~I~~Vit~~~~~-~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~ 113 (265)
...+.++++|. +.++.|-.+-+.. --..+..+|+++|||++++..+ .+|=.++.
T Consensus 141 keV~KaIekgk--AkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk-----~eLG~A~G 195 (266)
T 2zkr_f 141 NTVTTLVENKK--AQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK-----ARLGHLVH 195 (266)
T ss_dssp HHHHHHHHTTC--CSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCH-----HHHHHHHT
T ss_pred HHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCH-----HHHHHHhC
Confidence 44566666674 5665333332211 1245679999999999987632 45555554
No 313
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=21.79 E-value=3.2e+02 Score=23.25 Aligned_cols=77 Identities=9% Similarity=-0.004 Sum_probs=39.1
Q ss_pred CCCCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhC
Q 024606 35 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 114 (265)
Q Consensus 35 ~~~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~ 114 (265)
..++.||+.+. .+... ++.++ | ..++++-.......-.+.....+..++|..-- . ...+-|.++++ +
T Consensus 20 ~~~p~RIV~l~---~~~~e-~l~aL--G---~~~Vg~~~~~~~~~~~~~~~~~~~~~~~~vG~-~-~~~n~E~I~al--~ 86 (305)
T 3r5t_A 20 PSQPKRILSTA---VTVTG-TLLAI--D---APVIASAATTQSTFFEQWRKLAELRQVKKLWP-A-GSVDLESVYVE--Q 86 (305)
T ss_dssp CSCCSSEEESC---HHHHH-HHHHT--T---CCEEEEEECTTSCCCTTTHHHHHHTTCEEEEE-T-TCCCHHHHHHH--C
T ss_pred cCCCeEEEEEC---cchhH-HHHHc--C---CceEEEeccccccccchhHhhHhhcCCCccCC-C-CCCCHHHHHhc--C
Confidence 45678988875 33334 34443 3 36887765432111112222234568887531 1 11222333332 9
Q ss_pred CCEEEEEecC
Q 024606 115 TDFLVLARYM 124 (265)
Q Consensus 115 ~D~vv~ag~~ 124 (265)
||+|+...+.
T Consensus 87 PDLIi~~~~~ 96 (305)
T 3r5t_A 87 PDLIVVSMIG 96 (305)
T ss_dssp CSEEEEESSS
T ss_pred CCEEEEeccc
Confidence 9999887653
No 314
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=21.42 E-value=90 Score=28.40 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=25.4
Q ss_pred CceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCC
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 78 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~ 78 (265)
++||++|+-|. .+..++..++. +..++++|||-.|+.
T Consensus 4 ~~~IV~igGGt--Gl~~ll~gLk~--~~~~iTaIVtvaDDG 40 (326)
T 2q7x_A 4 XPXITVIGGGT--GSPVILXSLRE--XDVEIAAIVTVADDG 40 (326)
T ss_dssp CCEEEEECCCT--THHHHHHHHHH--SSCEEEEEECCBSCG
T ss_pred CCeEEEEcCcc--cHHHHHHHhcc--CCCCeEEEEECccCC
Confidence 47899887555 45556666543 257899999977654
No 315
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=21.37 E-value=1.2e+02 Score=24.78 Aligned_cols=70 Identities=11% Similarity=0.156 Sum_probs=31.4
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHH-hhCC
Q 024606 37 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 115 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~-l~~~ 115 (265)
.+++|+|+|.|. .-..+.+.+.+. .+ |+ |+ .++ ....+.+. .|+.+...+. .+.+.+.+. +.++
T Consensus 8 ~~~~viI~G~G~--~G~~la~~L~~~--g~-v~-vi-d~~----~~~~~~~~-~~~~~i~gd~---~~~~~l~~a~i~~a 72 (234)
T 2aef_A 8 KSRHVVICGWSE--STLECLRELRGS--EV-FV-LA-EDE----NVRKKVLR-SGANFVHGDP---TRVSDLEKANVRGA 72 (234)
T ss_dssp --CEEEEESCCH--HHHHHHHHSTTS--EE-EE-EE-SCG----GGHHHHHH-TTCEEEESCT---TCHHHHHHTTCTTC
T ss_pred CCCEEEEECCCh--HHHHHHHHHHhC--Ce-EE-EE-ECC----HHHHHHHh-cCCeEEEcCC---CCHHHHHhcCcchh
Confidence 457899988754 223444443221 23 33 33 332 11233334 6777765332 112222222 3367
Q ss_pred CEEEEE
Q 024606 116 DFLVLA 121 (265)
Q Consensus 116 D~vv~a 121 (265)
|.++++
T Consensus 73 d~vi~~ 78 (234)
T 2aef_A 73 RAVIVD 78 (234)
T ss_dssp SEEEEC
T ss_pred cEEEEc
Confidence 777665
No 316
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=21.36 E-value=1.8e+02 Score=26.26 Aligned_cols=113 Identities=11% Similarity=0.126 Sum_probs=50.9
Q ss_pred HHHHhhCCCEEEEEecCCCCcchhhhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC----
Q 024606 108 LLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG---- 183 (265)
Q Consensus 108 l~~~l~~~D~vv~ag~~~~ip~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~il~~~~~~~iNiHpslLP~yRG~---- 183 (265)
+.++++++|+|+++--. .+ ..++++..+.++..+.+.+-+--| ||.
T Consensus 216 l~ell~~aDvVil~vP~-----t~--------------------~t~~li~~~~l~~mk~gailIN~a-----RG~vvde 265 (340)
T 4dgs_A 216 PVDLARDSDVLAVCVAA-----SA--------------------ATQNIVDASLLQALGPEGIVVNVA-----RGNVVDE 265 (340)
T ss_dssp HHHHHHTCSEEEECC-----------------------------------CHHHHHHTTTTCEEEECS-----CC-----
T ss_pred HHHHHhcCCEEEEeCCC-----CH--------------------HHHHHhhHHHHhcCCCCCEEEECC-----CCcccCH
Confidence 44566799999886321 11 122377888888877664433332 343
Q ss_pred cHHHHHHHhCC-CEeEEEEEEecCccCCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 024606 184 KPAKQAFDAGV-KLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELR 253 (265)
Q Consensus 184 ~pi~~ai~~G~-~~~GvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ai~~i~~g~ 253 (265)
..+..|+.+|. ...|.-|+.-....+. +.+....+-+.|.-...+...+ +...+.+.+.+..+.+|+
T Consensus 266 ~aL~~aL~~g~i~gA~LDVf~~EP~~~~-~L~~~~nvilTPHia~~t~e~~--~~~~~~~~~nl~~~~~g~ 333 (340)
T 4dgs_A 266 DALIEALKSGTIAGAGLDVFVNEPAIRS-EFHTTPNTVLMPHQGSATVETR--MAMGKLVLANLAAHFAGE 333 (340)
T ss_dssp ---------CCSSEEEESCCSSSSSCCS-HHHHSSSEEECSSCSSCCHHHH--HHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCCceEEEeCCcCCCCCCcc-chhhCCCEEEcCcCCcCCHHHH--HHHHHHHHHHHHHHHcCC
Confidence 33455666664 2345555554444443 5555455556654322222111 223445556666666665
No 317
>4e6f_A Uncharacterized protein; PF14730 family protein, DUF4468 with TBP-like fold,structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.49A {Bacteroides ovatus}
Probab=21.14 E-value=98 Score=26.04 Aligned_cols=35 Identities=6% Similarity=-0.032 Sum_probs=29.4
Q ss_pred CCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 024606 209 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAK 244 (265)
Q Consensus 209 D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~ 244 (265)
..|.|+..+.+.+ |+.+..++++++..-..+++.+
T Consensus 21 vdGKVvFt~~i~v-Pg~S~~qIYd~~~~wl~~~~~~ 55 (181)
T 4e6f_A 21 VDGKVVFSKEFQI-PGMSQAQIYDTMTKWMDERLKE 55 (181)
T ss_dssp ETTEEEEEEEEEC-TTSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEEEEecC-CCCCHHHHHHHHHHHHHHHhcc
Confidence 4799999999999 6799999999988777666644
No 318
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=20.75 E-value=1.5e+02 Score=27.13 Aligned_cols=75 Identities=15% Similarity=0.067 Sum_probs=36.1
Q ss_pred CceEEEEEeCCchhHHHHHHHHH-cCCCCceEEEEeeCCCCCCCcHHHHHHHHc------CCCEEEECCCCCchHHHHHH
Q 024606 38 KYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERH------GIPYHYLCAKENEREEELLE 110 (265)
Q Consensus 38 ~~rIav~~Sg~g~~l~~ll~~~~-~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~------gIP~~~~~~~~~~~~~~l~~ 110 (265)
|+||+|+|.|. .-..+.+.+. .|....+|+ ++ +++ .....+.+++. ++....++- .+.+++.+
T Consensus 1 M~kVlIiGaGg--iG~~ia~~L~~~g~~~~~V~-v~-~r~---~~~~~~la~~l~~~~~~~~~~~~~D~---~d~~~l~~ 70 (405)
T 4ina_A 1 MAKVLQIGAGG--VGGVVAHKMAMNREVFSHIT-LA-SRT---LSKCQEIAQSIKAKGYGEIDITTVDA---DSIEELVA 70 (405)
T ss_dssp -CEEEEECCSH--HHHHHHHHHHTCTTTCCEEE-EE-ESC---HHHHHHHHHHHHHTTCCCCEEEECCT---TCHHHHHH
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCCceEEE-EE-ECC---HHHHHHHHHHhhhhcCCceEEEEecC---CCHHHHHH
Confidence 46899998742 2233444333 232102443 33 331 22344555543 355544432 12355666
Q ss_pred Hhh--CCCEEEEEe
Q 024606 111 LVQ--NTDFLVLAR 122 (265)
Q Consensus 111 ~l~--~~D~vv~ag 122 (265)
+++ ++|+||.+.
T Consensus 71 ~l~~~~~DvVin~a 84 (405)
T 4ina_A 71 LINEVKPQIVLNIA 84 (405)
T ss_dssp HHHHHCCSEEEECS
T ss_pred HHHhhCCCEEEECC
Confidence 666 499988663
No 319
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=20.74 E-value=3e+02 Score=22.28 Aligned_cols=38 Identities=21% Similarity=0.187 Sum_probs=27.2
Q ss_pred cHHHHHHHHcCCCEEEECCCCCchHHHHHHHhh----C-CCEEEEE
Q 024606 81 SHVIRFLERHGIPYHYLCAKENEREEELLELVQ----N-TDFLVLA 121 (265)
Q Consensus 81 ~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~----~-~D~vv~a 121 (265)
..+.+.|+++|+.+..... ..|-+++++++ + .|-+|+.
T Consensus 31 ~~l~~~a~~~g~~v~~~QS---N~EgeLId~Ih~a~~~~~dgiIIN 73 (149)
T 2uyg_A 31 ALCEAWGAELGLGVVFRQT---NYEGQLIEWVQQAHQEGFLAIVLN 73 (149)
T ss_dssp HHHHHHHHHTTCCEEEEEC---SCHHHHHHHHHHTTTTTCSEEEEE
T ss_pred HHHHHHHHHcCCEEEEEee---CCHHHHHHHHHHhccCCeeEEEEc
Confidence 3467889999998876553 24678999886 3 7877653
No 320
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=20.73 E-value=65 Score=30.63 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=25.7
Q ss_pred hhhhhhhcccCccccccc--ccCChhHHhhcCCCeEEecCCC
Q 024606 137 YKLLESLSSKGSLTSYFN--MILSGKFLRSYGKDVINIHHGL 176 (265)
Q Consensus 137 ~~~~~~~~~~~~~s~y~~--~il~~~il~~~~~~~iNiHpsl 176 (265)
-+.++.+.||+.+=.|.. .++...+.+....+++++-.|.
T Consensus 143 ~~~i~~~~P~A~~in~tNP~~i~t~a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 143 AEKMKKMAPKAYLMQTANPVFEITQAVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHCTTCEEEECSSCHHHHHHHHHHHHCCCEEEECCGG
T ss_pred HHHHHhhCCCeEEEEecChHHHHHHHHHHhCCCCeEEECCCH
Confidence 355667788887665554 2344455555577899988764
No 321
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.69 E-value=91 Score=26.61 Aligned_cols=67 Identities=22% Similarity=0.256 Sum_probs=37.4
Q ss_pred CceEEEEEeCCch--hHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLASKQEH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~Sg~g~--~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
.+||.|+|.|.-. .++.|+++ | ++|+ ||+.. ....+.+++++.+|.+.. .... + +.+.++
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~---G---A~Vt-Vvap~---~~~~l~~l~~~~~i~~i~--~~~~---~---~dL~~a 92 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE---G---AAIT-VVAPT---VSAEINEWEAKGQLRVKR--KKVG---E---EDLLNV 92 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG---C---CCEE-EECSS---CCHHHHHHHHTTSCEEEC--SCCC---G---GGSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---C---CEEE-EECCC---CCHHHHHHHHcCCcEEEE--CCCC---H---hHhCCC
Confidence 4788888866521 23334333 3 6665 55543 234577788777776542 2111 1 124589
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+||.+-
T Consensus 93 dLVIaAT 99 (223)
T 3dfz_A 93 FFIVVAT 99 (223)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9998764
No 322
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=20.52 E-value=95 Score=26.84 Aligned_cols=63 Identities=8% Similarity=0.055 Sum_probs=32.6
Q ss_pred CceEEEEEeCC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCCC
Q 024606 38 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 116 (265)
Q Consensus 38 ~~rIav~~Sg~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~D 116 (265)
++||+|+|.|. |..+...+.. .| ++|.+ .+++.. . .+.+.+.|+... . .+.+.++ +|
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~--~G---~~V~~--~dr~~~---~-~~~~~~~g~~~~--~--------~~~~~~~-aD 72 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE--WP---GGVTV--YDIRIE---A-MTPLAEAGATLA--D--------SVADVAA-AD 72 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT--ST---TCEEE--ECSSTT---T-SHHHHHTTCEEC--S--------SHHHHTT-SS
T ss_pred CCeEEEECcCHHHHHHHHHHHH--CC---CeEEE--EeCCHH---H-HHHHHHCCCEEc--C--------CHHHHHh-CC
Confidence 47999999987 5554433322 23 56643 344221 1 233445565321 1 1234455 88
Q ss_pred EEEEEe
Q 024606 117 FLVLAR 122 (265)
Q Consensus 117 ~vv~ag 122 (265)
+|+++-
T Consensus 73 vvi~~v 78 (296)
T 3qha_A 73 LIHITV 78 (296)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 888763
No 323
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.25 E-value=1.2e+02 Score=25.92 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=32.4
Q ss_pred CceEEEEEe-CC-chhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECCCCCchHHHHHHHhhCC
Q 024606 38 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 115 (265)
Q Consensus 38 ~~rIav~~S-g~-g~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~l~~~l~~~ 115 (265)
+|||+|+|. |. |+.+...+.. .| ++|. +.+++ ... .+.+.+.|+.+. + ..+.++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~--~g---~~V~--~~~r~---~~~-~~~~~~~g~~~~--~---------~~~~~~~a 68 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD--SA---HHLA--AIEIA---PEG-RDRLQGMGIPLT--D---------GDGWIDEA 68 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--SS---SEEE--EECCS---HHH-HHHHHHTTCCCC--C---------SSGGGGTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHh--CC---CEEE--EEECC---HHH-HHHHHhcCCCcC--C---------HHHHhcCC
Confidence 579999998 76 5444333322 23 5664 33442 112 333444675431 1 01234578
Q ss_pred CEEEEEe
Q 024606 116 DFLVLAR 122 (265)
Q Consensus 116 D~vv~ag 122 (265)
|+|+++-
T Consensus 69 DvVi~av 75 (286)
T 3c24_A 69 DVVVLAL 75 (286)
T ss_dssp SEEEECS
T ss_pred CEEEEcC
Confidence 9888764
No 324
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=20.19 E-value=1.1e+02 Score=27.35 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=14.2
Q ss_pred CCceEEEEEeCC-chhHHHHH
Q 024606 37 PKYKVAVLASKQ-EHCLVDFL 56 (265)
Q Consensus 37 ~~~rIav~~Sg~-g~~l~~ll 56 (265)
.++||+|+|.|. |+.+...+
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L 40 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVV 40 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHH
Confidence 357999999987 66554433
No 325
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=20.09 E-value=1.6e+02 Score=26.10 Aligned_cols=68 Identities=10% Similarity=-0.023 Sum_probs=37.2
Q ss_pred CCceEEEEEeCC-c-hhHHHHHHHHHcCCCCceEEEEeeCCCCCCCcHHHHHHHHcC---CCEEEECCCCCchHHHHHHH
Q 024606 37 PKYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG---IPYHYLCAKENEREEELLEL 111 (265)
Q Consensus 37 ~~~rIav~~Sg~-g-~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~~~~v~~~a~~~g---IP~~~~~~~~~~~~~~l~~~ 111 (265)
...|++|+|+|. + ..+.++.+. . +.+-+.| .+++ .....+++++.+ +++. +.. +.+.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~---~--~~~~V~v-~~r~---~~~a~~la~~~~~~~~~~~-~~~--------~~e~ 185 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRV---F--DIGEVKA-YDVR---EKAAKKFVSYCEDRGISAS-VQP--------AEEA 185 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH---S--CCCEEEE-ECSS---HHHHHHHHHHHHHTTCCEE-ECC--------HHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHh---C--CccEEEE-ECCC---HHHHHHHHHHHHhcCceEE-ECC--------HHHH
Confidence 347999999875 2 234444432 1 2333334 4552 234456665543 6654 431 3345
Q ss_pred hhCCCEEEEEec
Q 024606 112 VQNTDFLVLARY 123 (265)
Q Consensus 112 l~~~D~vv~ag~ 123 (265)
+ ++|+|+++--
T Consensus 186 v-~aDvVi~aTp 196 (322)
T 1omo_A 186 S-RCDVLVTTTP 196 (322)
T ss_dssp T-SSSEEEECCC
T ss_pred h-CCCEEEEeeC
Confidence 6 8999998764
No 326
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=20.05 E-value=2e+02 Score=26.76 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=36.0
Q ss_pred CceEEEEEeCCc--hhHHHHHHHHHcCCCCceEEEEeeCCCCCC-CcHHHHHHHHcCCC-EEEEC
Q 024606 38 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIP-YHYLC 98 (265)
Q Consensus 38 ~~rIav~~Sg~g--~~l~~ll~~~~~~~l~~~I~~Vit~~~~~~-~~~v~~~a~~~gIP-~~~~~ 98 (265)
+.||++..||+- +.+..++.. . ..+|.++..+..... -..+.+.|++.||| ++.++
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e--~---G~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd 64 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKE--Q---GYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIED 64 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHH--T---TEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCeEEEEEcChHHHHHHHHHHHH--c---CCEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 468999999863 334444433 2 367877776653222 24578899999999 66553
No 327
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=20.02 E-value=1.2e+02 Score=28.96 Aligned_cols=59 Identities=8% Similarity=-0.000 Sum_probs=36.1
Q ss_pred CCceEEEEEeCCchhHHHHH------HHHHc--CCCCceEEEEeeCCCCCCCcHHHHHHHHcCCCEEEECC
Q 024606 37 PKYKVAVLASKQEHCLVDFL------YGWQE--GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 99 (265)
Q Consensus 37 ~~~rIav~~Sg~g~~l~~ll------~~~~~--~~l~~~I~~Vit~~~~~~~~~v~~~a~~~gIP~~~~~~ 99 (265)
+..-+++++|.+|+..+.+. +.+.+ |+....+++ +|++ .++++.+.|++.||+++.++.
T Consensus 139 ~~~TlvIviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~VA-vT~~---~~s~L~~~A~~~Gi~~f~~~d 205 (460)
T 2q8n_A 139 PKTTLFNVISKSGSTAEVMATYSIARGILEAYGLDPREHMLI-TTDP---EKGFLRKLVKEEGFRSLEVPP 205 (460)
T ss_dssp GGGEEEEEECSSSCCHHHHHHHHHHHHHHHHTTCCGGGTEEE-EECS---SSSHHHHHHHHHTCEEEECCT
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCccCeEEE-EeCC---CCChHHHHHHHhCCceEeecc
Confidence 34447888999886433222 22221 211245654 5544 357899999999999888764
No 328
>2kg4_A Growth arrest and DNA-damage-inducible protein GA alpha; GADD45, flexible regions, monomer cycle; NMR {Homo sapiens}
Probab=20.01 E-value=1.2e+02 Score=25.15 Aligned_cols=18 Identities=11% Similarity=0.085 Sum_probs=15.4
Q ss_pred HHHHHHHcCCCEEEECCC
Q 024606 83 VIRFLERHGIPYHYLCAK 100 (265)
Q Consensus 83 v~~~a~~~gIP~~~~~~~ 100 (265)
+..+|.++|||+.+++.+
T Consensus 78 i~alC~E~~Ip~i~V~s~ 95 (165)
T 2kg4_A 78 IQAFCCENDINILRVSNP 95 (165)
T ss_dssp HHHHHHHTTCCEEEESCH
T ss_pred HHHHHHHcCCCEEEECCH
Confidence 569999999999998753
Done!