BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024613
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/265 (84%), Positives = 245/265 (92%), Gaps = 2/265 (0%)
Query: 1 MASVCASPAVAAI--SSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAA 58
MAS CAS +AA+ SSPSSQK+ S+ GATKASFLGGK+L++ K A G+RSV+VSA A
Sbjct: 1 MASACASSTIAAVAFSSPSSQKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVA 60
Query: 59 ADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAG 118
ADP+RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAG
Sbjct: 61 ADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120
Query: 119 IFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNT 178
IFIPE LTK+G+LNTPSWYTAGE EYFTDTTTLF++E++ IGWAEGRRWADIIKPGCVNT
Sbjct: 121 IFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNT 180
Query: 179 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH 238
DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH 240
Query: 239 IYTGTGPIDNLIAHLADPGHATVFA 263
IYTGTGPIDNL AHLADPGHAT+FA
Sbjct: 241 IYTGTGPIDNLFAHLADPGHATIFA 265
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/265 (82%), Positives = 238/265 (89%), Gaps = 2/265 (0%)
Query: 1 MASVCASPAVAAI--SSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAA 58
MAS CAS +AA+ SSPSS+++ S+ G TKASFLGG++L++ K T RS + A
Sbjct: 1 MASACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVA 60
Query: 59 ADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAG 118
ADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAG
Sbjct: 61 ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 120
Query: 119 IFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNT 178
IFIPELLTK+GILNTPSWYTAGE EYFTDTTTLFIVE++ IGWAEGRRWADIIKPGCVNT
Sbjct: 121 IFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNT 180
Query: 179 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH 238
DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 181 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH 240
Query: 239 IYTGTGPIDNLIAHLADPGHATVFA 263
IYTGTGPIDNL AHLADPGHAT+FA
Sbjct: 241 IYTGTGPIDNLFAHLADPGHATIFA 265
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 231 bits (588), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 160/261 (61%), Gaps = 15/261 (5%)
Query: 1 MASVCASPAVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAAD 60
MA+V A A+I P + K R + G++ + L G++A T S V A +
Sbjct: 1 MATVTTH-ASASIFRPCTSKPRFLTGSSGRL---NRDLSFTSIGSSAKTSSFKVEAKKGE 56
Query: 61 PNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIF 120
W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+
Sbjct: 57 -----WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGML 111
Query: 121 IPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDP 180
+PE+ TK+GI+N P WY AG+ +YF ++TLF++E I + E RRW DI PG VN DP
Sbjct: 112 LPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 171
Query: 181 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIY 240
IF L +VGYPGG+ F+PL + +E + KE+ NGRLAMLA +G QH
Sbjct: 172 IFKQYSLPKGEVGYPGGI-FNPLNFAP-----TQEAKEKELANGRLAMLAFLGFVVQHNV 225
Query: 241 TGTGPIDNLIAHLADPGHATV 261
TG GP +NL+ HL+DP H T+
Sbjct: 226 TGKGPFENLLQHLSDPWHNTI 246
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 230 bits (586), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 159/264 (60%), Gaps = 22/264 (8%)
Query: 1 MASVCASPAVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAA- 59
MA+V A AAI P KSR FLGG KL + A R V S +A+
Sbjct: 1 MATVTTQ-ASAAIFGPCGLKSR---------FLGGSSGKLNRGVAF---RPVGCSPSASF 47
Query: 60 --DPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAA 117
+ + W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG A
Sbjct: 48 KVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVA 107
Query: 118 GIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVN 177
G+ +PE+ T +GI+N P WY AG+ EYF ++TLF++E I + E RRW DI PG VN
Sbjct: 108 GMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVN 167
Query: 178 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQ 237
DPIF L +VGYPGG+ F+PL + E + KEI NGRLAMLA +G Q
Sbjct: 168 QDPIFKQYSLPAGEVGYPGGI-FNPLNFAP-----TLEAKEKEIANGRLAMLAFLGFIIQ 221
Query: 238 HIYTGTGPIDNLIAHLADPGHATV 261
H TG GP DNL+ H++DP H T+
Sbjct: 222 HNVTGKGPFDNLLQHISDPWHNTI 245
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 187 bits (475), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 130/214 (60%), Gaps = 15/214 (7%)
Query: 50 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHC 109
R V+V A + W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+
Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNG 79
Query: 110 RWAMLGAAGIFIPELLTKLGILNTPSWYT-AGELEYFTDTTTLFIVEMIFIGWAEGRRWA 168
RWAMLG AG+ IPE+LTK G++N P W G+ YF ++T V M + E RRW
Sbjct: 80 RWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQ 138
Query: 169 DIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAM 228
DI PG VN DPIF + L + GYPG + F+PL + +P + KE KE+ NGRLAM
Sbjct: 139 DIKNPGSVNQDPIFKSYSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAM 191
Query: 229 LAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVF 262
LA +G QH G GP +NL HLADP H T+
Sbjct: 192 LAFLGFLVQHNVHGKGPFENLQQHLADPWHNTII 225
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 173 bits (439), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 131/231 (56%), Gaps = 19/231 (8%)
Query: 49 TRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNV 102
R+ S NR LWF +LDG LPGDFGFDPLGL SDPE +W
Sbjct: 39 VRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLA 97
Query: 103 QSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWYT------AGELEYFTDTTTLFI 153
E+++ R+AMLGAAG PE+L K G++ +W+ AG Y+ D TLF+
Sbjct: 98 YGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 157
Query: 154 VEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPE 211
+EM +G+AE RR+ D KPG + K G D YPGG F+PLG+G +
Sbjct: 158 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGK-DEK 216
Query: 212 KVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVF 262
+KEL+ KEIKNGRLAMLA++G + Q + TG GP NL+ HLADP + V
Sbjct: 217 SMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVL 267
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 137/237 (57%), Gaps = 25/237 (10%)
Query: 49 TRSVSVSAAAADP------NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL---- 98
+R V AAA P +RPLWF +LDGSLPGD+GFDPLGL SDPE
Sbjct: 35 SRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFI 93
Query: 99 --RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWYT------AGELEYFTD 147
RW E+++ R+AMLGA G PE L K+G++ +W+ AG Y+ D
Sbjct: 94 EPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWAD 153
Query: 148 TTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGW 205
TLF++EM +G+AE RR+ D KPG + K G + YPGG +F+PLG+
Sbjct: 154 NYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGF 213
Query: 206 GSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVF 262
G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP NL+ H+ADP + V
Sbjct: 214 GK-DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVL 269
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 110/205 (53%), Gaps = 28/205 (13%)
Query: 66 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
W PG P +LDGS PGDFGFDPLGLG P L +SE++HCRWAML GI +PE L
Sbjct: 48 WMPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL 107
Query: 126 TKLGILNTPSW--YTAGELEYFTDTT------TLFIVEMIFIGWAEGRRWADIIKPGCVN 177
+ W G+ Y + T+ +E + I + E +R +
Sbjct: 108 GYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQR--------SME 159
Query: 178 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQ 237
DP YPGG FDPLG+ S P+K++EL+ KEIKNGRLA+LA +G Q
Sbjct: 160 KDP---------EKKKYPGGA-FDPLGY-SKDPKKLEELKVKEIKNGRLALLAFVGFCVQ 208
Query: 238 H-IYTGTGPIDNLIAHLADPGHATV 261
Y GTGP++NL HLADP H +
Sbjct: 209 QSAYPGTGPLENLATHLADPWHNNI 233
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 138/265 (52%), Gaps = 40/265 (15%)
Query: 12 AISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGT-RSVSVSAAAADPNRPLW---F 67
A+SSPS G T + +G ++ +RK TAG ++V S+ P+R + F
Sbjct: 7 ALSSPSLAGKAVKLGPTASEIIGEGRITMRK---TAGKPKTVQSSSPWYGPDRVKYLGPF 63
Query: 68 PGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK 127
G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL +
Sbjct: 64 SGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 128 LGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADII 171
G+ W+ AG L+Y + + ++ ++I +G EG R A
Sbjct: 123 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG-- 180
Query: 172 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAV 231
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 181 GPLGEVVDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSM 226
Query: 232 MGAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP++NL HLADP
Sbjct: 227 FGFFVQAIVTGKGPLENLADHLADP 251
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 128/266 (48%), Gaps = 51/266 (19%)
Query: 5 CASPAVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRP 64
C++ V ++ +PSS+ RS L T+G ++S
Sbjct: 10 CSAVGVPSLLAPSSRSGRS-------------GLPFCAYATTSGRVTMSAE--------- 47
Query: 65 LWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 124
WFPG P LDGS PGDFGFDPLGL + PE +SEI HCRWAML G+ +PE
Sbjct: 48 -WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEA 106
Query: 125 LTKLGILNTPSWYTA--GELEYFTDTT------TLFIVEMIFIGWAEGRRWADIIKPGCV 176
L + W G+ Y + T+ +E + I +AE +R +
Sbjct: 107 LGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TM 158
Query: 177 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWF 236
DP YPGG FDPLG+ S P K +EL+ KEIKNGRLAMLA +G
Sbjct: 159 EKDP---------EKKKYPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVGFCV 207
Query: 237 QH-IYTGTGPIDNLIAHLADPGHATV 261
Q Y GTGP++NL HLADP H +
Sbjct: 208 QQSAYPGTGPLENLATHLADPWHNNI 233
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 131/249 (52%), Gaps = 43/249 (17%)
Query: 30 ASFLGGKKLKLRKNGATAGTRSVSVSAAAA---DPNRPLW---FPGSTPPEWLDGSLPGD 83
A G ++ +RK A T+ ++ SA+ + P+R L+ F G PP +L G PGD
Sbjct: 31 AGVHGEARVTMRK----ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGD 85
Query: 84 FGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE- 141
+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG
Sbjct: 86 YGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 145
Query: 142 ------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKL 187
L+Y + + ++ ++I +G EG R A P TDPI
Sbjct: 146 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVTDPI------ 197
Query: 188 TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 247
YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+
Sbjct: 198 ------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 249
Query: 248 NLIAHLADP 256
NL HLADP
Sbjct: 250 NLADHLADP 258
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 135/264 (51%), Gaps = 38/264 (14%)
Query: 12 AISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FP 68
A+SSPS + + G K+ +RK + A ++VS + P+R + F
Sbjct: 7 ALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKA--KTVSSGSPWYGPDRVKYLGPFS 64
Query: 69 GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKL 128
G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL +
Sbjct: 65 GESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123
Query: 129 GI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIK 172
G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 124 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--G 181
Query: 173 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 232
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 182 PLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMF 227
Query: 233 GAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP++NL HLADP
Sbjct: 228 GFFVQAIVTGKGPLENLADHLADP 251
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 134/260 (51%), Gaps = 36/260 (13%)
Query: 15 SPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLWFP--GSTP 72
S SS ++V ++ +G ++ +RK A A + VS S+ +R L+ P
Sbjct: 9 SSSSFAGKAVKNLPSSALIGDARVNMRKTAAKA--KQVSSSSPWYGSDRVLYLGPLSGEP 66
Query: 73 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-L 131
P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126
Query: 132 NTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCV 176
W+ AG L+Y + + ++ +++ +G EG R A P
Sbjct: 127 GEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGE 184
Query: 177 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWF 236
DP+ YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G +
Sbjct: 185 IVDPL------------YPGGS-FDPLGLAE-RPQAFAELKVKEIKNGRLAMFSMFGFFV 230
Query: 237 QHIYTGTGPIDNLIAHLADP 256
Q I TG GP+++L H+ADP
Sbjct: 231 QAIVTGKGPLEDLADHIADP 250
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 134/264 (50%), Gaps = 38/264 (14%)
Query: 12 AISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FP 68
A+SSPS + + + G K +RK A + VS + P+R + F
Sbjct: 7 ALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKA--KPVSSGSPWYGPDRVKYLGPFS 64
Query: 69 GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKL 128
G P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL +
Sbjct: 65 GEAP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123
Query: 129 GI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIK 172
G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 124 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG--G 181
Query: 173 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 232
P TDP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 182 PLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMF 227
Query: 233 GAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP+DNL+ HLADP
Sbjct: 228 GFFVQAIVTGKGPLDNLVDHLADP 251
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 134/264 (50%), Gaps = 38/264 (14%)
Query: 12 AISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FP 68
A+SS S + + G K+ +RK + A + VS S+ PNR + F
Sbjct: 7 ALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKA--KPVSSSSPWYGPNRVKYLGPFS 64
Query: 69 GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKL 128
G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL +
Sbjct: 65 GESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123
Query: 129 GI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIK 172
G+ W+ G L+Y + + ++ +++ +G EG R A +
Sbjct: 124 GVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--E 181
Query: 173 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 232
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 182 PLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMF 227
Query: 233 GAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP++NL HLADP
Sbjct: 228 GFFVQAIVTGKGPLENLADHLADP 251
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 128/251 (50%), Gaps = 32/251 (12%)
Query: 29 KASFLGGKKLK-----LRKNGATAGTRSVSVSAAAADPNRPLWFPGSTP----------P 73
+++F G LK +RK G+ G R+ + P + +W+ P P
Sbjct: 8 QSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAP-QSIWYGEDRPKYLGPFSEQTP 66
Query: 74 EWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LN 132
+L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+
Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG 126
Query: 133 TPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNN 185
W+ AG L+Y + + ++ I WA A ++ G V +
Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----AQVVLMGFVEGYRVGGGP 180
Query: 186 KLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 245
G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP
Sbjct: 181 LGEGLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 246 IDNLIAHLADP 256
I+NL H+ADP
Sbjct: 239 IENLYDHVADP 249
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 127/251 (50%), Gaps = 32/251 (12%)
Query: 29 KASFLGGKKLK-----LRKNGATAGTRSVSVSAAAADPNRPLWFPGSTP----------P 73
+++F G LK +RK G+ G R+ + P + +W+ P P
Sbjct: 8 QSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAP-QSIWYGEDRPKYLGPFSEQTP 66
Query: 74 EWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LN 132
+L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+
Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG 126
Query: 133 TPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNN 185
W+ AG L+Y + L + I WA +I+ V P+
Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGN-PNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLG--- 182
Query: 186 KLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 245
G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP
Sbjct: 183 --EGLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 246 IDNLIAHLADP 256
I+NL H+ADP
Sbjct: 239 IENLFDHVADP 249
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 139/267 (52%), Gaps = 39/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
+ A+SSP + K+ ++ + + G K+ +RK + A + VS + P+R +
Sbjct: 4 STTALSSPFAGKAVKLS-PSSSEVTGNGKVTMRKTASKA--KPVSSGSPWYGPDRVKYLG 60
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL
Sbjct: 61 PFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 180 --GPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMF 223
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q I TG GP++NL HLADP
Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLADP 250
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 139/267 (52%), Gaps = 39/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
+ A+SSP + K+ ++ + + G K+ +RK A + VS + P+R +
Sbjct: 4 STTALSSPFAGKAVKLS-PSSSEVTGNGKVTMRKTANKA--KPVSSGSPWYGPDRVKYLG 60
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL
Sbjct: 61 PFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
+P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 180 --EPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMF 223
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q + TG GP++NL HLADP
Sbjct: 224 SMFGFFVQALVTGKGPLENLADHLADP 250
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 141/279 (50%), Gaps = 49/279 (17%)
Query: 1 MASVCASPAVAAISS--PSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAA 58
+ S CA A A +SS P + + V GA G +L +RK G +SV+ S +
Sbjct: 10 IGSRCAF-AGAQLSSVKPQNNQLLGVGGAH-----GEARLTMRK---ATGKKSVAASIDS 60
Query: 59 --ADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAM 113
P+R L+ F G PP +L G PGD+G+D GL +DPET N + E++H RWAM
Sbjct: 61 PWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 119
Query: 114 LGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMI 157
LGA G PELL + G+ W+ AG +L + ++ ++I
Sbjct: 120 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVI 179
Query: 158 FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELR 217
+G EG R A P TDPI YPGG FDPLG P+ EL+
Sbjct: 180 LMGAIEGYRVAG--GPLGEVTDPI------------YPGGN-FDPLGLAD-DPDAFAELK 223
Query: 218 TKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 256
KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP
Sbjct: 224 VKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 262
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 106/205 (51%), Gaps = 28/205 (13%)
Query: 66 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
W PG P +LDGS PGDFGFD LGLG P L +SE++HCRWAML GI +PE L
Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108
Query: 126 TKLGILNTPSWYT--AGELEYFTDTT------TLFIVEMIFIGWAEGRRWADIIKPGCVN 177
+ W G+ Y T+ +E + I + E +R
Sbjct: 109 GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR----------- 157
Query: 178 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQ 237
+ + YPGG FDPLG+ S P K +EL+ KEIKNGRLA+LA++G Q
Sbjct: 158 ------SMEKDSEKKKYPGGA-FDPLGY-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQ 209
Query: 238 H-IYTGTGPIDNLIAHLADPGHATV 261
Y GTGP++NL HLADP H +
Sbjct: 210 QSAYLGTGPLENLATHLADPWHNNI 234
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 131/264 (49%), Gaps = 38/264 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLWFP 68
A A+SSP+ +AG A G ++ +RK+ A + AD L
Sbjct: 4 ATMALSSPA------LAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPL 57
Query: 69 GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKL 128
PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL +
Sbjct: 58 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 117
Query: 129 GI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIK 172
G+ W+ AG L+Y + + ++ V+++ +G EG R A
Sbjct: 118 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--G 175
Query: 173 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 232
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 176 PLGEVVDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMF 221
Query: 233 GAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP++NL HLADP
Sbjct: 222 GFFVQAIVTGKGPLENLADHLADP 245
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 134/267 (50%), Gaps = 40/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
A A+SSPS + G ++ +RK A + V+ S+ P+R +
Sbjct: 4 ATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVA----KPVASSSPWYGPDRVKYLG 59
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL
Sbjct: 60 PFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ ++I +G EG R A
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 179 --GPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMF 222
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q I TG GP++NL HLADP
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLADP 249
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 134/265 (50%), Gaps = 36/265 (13%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSA-AAADPNRPLWF 67
A A+SSP ++ A +T ++ G ++ +RK A + S S AD L
Sbjct: 4 ATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60
Query: 68 PGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK 127
PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL +
Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 128 LGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADII 171
G+ W+ AG L+Y + + ++ V+++ +G EG R A
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG-- 178
Query: 172 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAV 231
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 179 GPLGEVVDPL------------YPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSM 224
Query: 232 MGAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP++NL HLADP
Sbjct: 225 FGFFVQAIVTGKGPLENLADHLADP 249
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 134/267 (50%), Gaps = 40/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
A A+SSPS + + G ++ +RK A +S S+ P+R +
Sbjct: 4 ATMALSSPSFAGQAVKLSPSASEISGNGRITMRK----AVAKSAPSSSPWYGPDRVKYLG 59
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL
Sbjct: 60 PFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 179 --GPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMF 222
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q I TG GP++NL HLADP
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLADP 249
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 115/214 (53%), Gaps = 36/214 (16%)
Query: 62 NRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAG 118
+RPL+ F GS PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G
Sbjct: 53 DRPLYLGPFSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111
Query: 119 IFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWA 162
PELL K G+ W+ AG L+Y + + ++ ++I +G
Sbjct: 112 CVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAV 171
Query: 163 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIK 222
EG R A P DPI YPGG FDPLG PE EL+ KE+K
Sbjct: 172 EGYRVAG--GPLGEVEDPI------------YPGGS-FDPLGLAD-DPEAFAELKVKELK 215
Query: 223 NGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 256
NGRLAM ++ G + Q I TG GPI+NL HLADP
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADP 249
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 108/194 (55%), Gaps = 17/194 (8%)
Query: 72 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI- 130
PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+
Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVK 124
Query: 131 LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 183
W+ AG L+Y + + + ++ I WA +I G V +
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----TQVILMGAVEGYRVAG 178
Query: 184 NNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTG 242
L D+ YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG
Sbjct: 179 EGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
Query: 243 TGPIDNLIAHLADP 256
GP++NL HLADP
Sbjct: 237 KGPLENLADHLADP 250
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 128/247 (51%), Gaps = 40/247 (16%)
Query: 28 TKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLWF-PGSTP-PEWLDGSLPGDFG 85
K +GG ++ +R+ +A T + P+RP + P S P +L G PGD+G
Sbjct: 25 CKIGAVGGGRVSMRRTVKSAPT------SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYG 78
Query: 86 FDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE--- 141
+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG
Sbjct: 79 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIF 138
Query: 142 ----LEYFTD--------TTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG 189
L+Y + ++ +++ +G+ EG R V P+ G
Sbjct: 139 SEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------VGGGPLG-----EG 184
Query: 190 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 249
D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL
Sbjct: 185 LDPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 250 IAHLADP 256
HLADP
Sbjct: 243 FDHLADP 249
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 122/247 (49%), Gaps = 38/247 (15%)
Query: 41 RKNGATAGTRSVSVSAAAAD---PNRPLWF-PGST-PPEWLDGSLPGDFGFDPLGLGSDP 95
+K T T++ +A + P+R W P ST P +L G PGD+G+D GL +DP
Sbjct: 19 KKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADP 78
Query: 96 ETLRWNVQSEIVHCRWAMLGAAGIFIPELL-TKLGI-LNTPSWYTAGE-------LEYF- 145
ET + + E++H RWA+LGA GI PELL T G+ P W+ AG L+Y
Sbjct: 79 ETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLG 138
Query: 146 -------TDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGL 198
+ V+++ +G EG R P DP++P G
Sbjct: 139 SPALIHAQNIVATLAVQVVLMGLIEGYRVNG--GPAGEGLDPLYP-------------GE 183
Query: 199 WFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGH 258
FDPLG P+ EL+ KEIKNGRLAM + G + Q I TG GPI NL HLADPG
Sbjct: 184 SFDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGT 242
Query: 259 ATVFAVS 265
FA +
Sbjct: 243 NNAFAAA 249
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 134/267 (50%), Gaps = 39/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
A AISS SS ++V + + G K +RK A + VS + P+R +
Sbjct: 4 ATMAISS-SSFAGKAVNVPSSSQITGNGKATMRKTVTKA--KPVSSGSPWYGPDRVKYLG 60
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL
Sbjct: 61 PFSGEAP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 119
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 180 --GPLGEVIDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMF 223
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q I TG GP++NL HLADP
Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLADP 250
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 126/242 (52%), Gaps = 40/242 (16%)
Query: 34 GGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLG 90
G K +RK ++SVS + P+R + F G PP +L G PGD+G+D G
Sbjct: 19 GNAKFTMRKTA----SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAG 73
Query: 91 LGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------L 142
L +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L
Sbjct: 74 LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGL 133
Query: 143 EYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGY 194
+Y + + ++ +++ +G EG R A P TDPI Y
Sbjct: 134 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPI------------Y 179
Query: 195 PGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLA 254
PGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLA
Sbjct: 180 PGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 237
Query: 255 DP 256
DP
Sbjct: 238 DP 239
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 141/279 (50%), Gaps = 49/279 (17%)
Query: 1 MASVCASPAVAAISS--PSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAA 58
+ S CA A A +SS P + + V GA G +L +RK G +SV+ S +
Sbjct: 10 IGSRCAF-AGAQLSSVKPQNNQLLGVGGAH-----GEARLTMRK---ATGRKSVAASIDS 60
Query: 59 --ADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAM 113
P+R ++ F G PP +L G PGD+G+D GL +DPET N + E++H RWAM
Sbjct: 61 PWYGPDRVMYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 119
Query: 114 LGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMI 157
LGA G PELL + G+ W+ AG +L + ++ ++I
Sbjct: 120 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVI 179
Query: 158 FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELR 217
+G EG R A P TDPI YPGG FDPLG P+ +++
Sbjct: 180 LMGAIEGYRVAG--GPLGEVTDPI------------YPGGN-FDPLGLAD-DPDAFADVK 223
Query: 218 TKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 256
KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP
Sbjct: 224 VKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 262
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 139/266 (52%), Gaps = 41/266 (15%)
Query: 12 AISSPS-SQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAA-ADPNRPLW--- 66
A+SSP+ + K + + LGG + +RK +A T+ V+ S + P+R +
Sbjct: 7 ALSSPTLTGKPVETSANPSSQELGGARFTMRK---SATTKKVASSGSPWYGPDRVKYLGP 63
Query: 67 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLT 126
F G +P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL+
Sbjct: 64 FSGESP-SYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLS 122
Query: 127 KLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADI 170
+ G+ W+ AG L+Y + + ++ ++I +G EG R A
Sbjct: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG- 181
Query: 171 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 230
P DP+ YPGG FDPLG PE EL+ KE+KNGRLAM +
Sbjct: 182 -GPLGEVVDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFS 226
Query: 231 VMGAWFQHIYTGTGPIDNLIAHLADP 256
+ G + Q I TG GP++NL HL+DP
Sbjct: 227 MFGFFVQAIVTGKGPLENLADHLSDP 252
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 131/267 (49%), Gaps = 38/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
A A+SSPS + + G K +RK A + VS + P+R +
Sbjct: 4 ATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKA--KPVSSGSPWYGPDRVKYLG 61
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G P +L G PGD+G+D L +DPET N + E++HCRWAMLGA G PELL
Sbjct: 62 PFSGEAP-SYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 181 --GPLGEVVDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMF 224
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q I TG GP++NL HLADP
Sbjct: 225 SMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 40/243 (16%)
Query: 33 LGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPL 89
LG ++ +RK +++VS + P+R + F G PP +L G PGD+G+D
Sbjct: 8 LGVGRVSMRKTA----SKTVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTA 62
Query: 90 GLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE------- 141
GL +DPET N + E++H RWAMLGA G PELL + G+ SW+ AG
Sbjct: 63 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGG 122
Query: 142 LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVG 193
L+Y + + ++ ++I +G EG R A P TDPI
Sbjct: 123 LDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPI------------ 168
Query: 194 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHL 253
YPGG FDPL PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL
Sbjct: 169 YPGGS-FDPLALAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 226
Query: 254 ADP 256
A+P
Sbjct: 227 AEP 229
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 130/258 (50%), Gaps = 31/258 (12%)
Query: 17 SSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLWFPGSTP---- 72
S+ +S + AG T L + +RK G + G S+ + A + +W+ P
Sbjct: 4 SAIQSSAFAGQTA---LKQRDELVRKVGVSDGRFSMRRTVKAVP--QSIWYGADRPKFLG 58
Query: 73 ------PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLT 126
P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL+
Sbjct: 59 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLS 118
Query: 127 KLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNT 178
K G+ W+ AG L+Y + + ++ I WA +I+ V
Sbjct: 119 KNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAI-WATQVVLMGLIEGYRVGG 177
Query: 179 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH 238
P+ G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q
Sbjct: 178 GPLG-----EGLDPLYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
Query: 239 IYTGTGPIDNLIAHLADP 256
I TG GPI+NL H+ADP
Sbjct: 231 IVTGKGPIENLADHIADP 248
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 142/277 (51%), Gaps = 50/277 (18%)
Query: 2 ASVCASPAVAAIS--SPSSQKSRSVAGATKASFLGGKKLKLRKN-GATAGTRSVSVSAAA 58
A+ S A+A S P ++ SR V G +A ++ +R+ +AG+ ++ A
Sbjct: 4 ATAMHSTALAGQSLVKPVNELSRKVLGNVEA------RVTMRRTVSKSAGSDTIWYGA-- 55
Query: 59 ADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLG 115
+RP + F G TP +L+G GD+G+D GL SDPET N + E++H RWAMLG
Sbjct: 56 ---DRPKFLGPFSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLG 111
Query: 116 AAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFI 159
A G PELL K G+ W+ AG L+Y + + ++ +++ +
Sbjct: 112 ALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 171
Query: 160 GWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTK 219
G EG R A P TDPI YPGG FDPLG P+ EL+ K
Sbjct: 172 GAVEGYRVAG--GPLGEVTDPI------------YPGGS-FDPLGLAD-DPDTFAELKVK 215
Query: 220 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 256
EIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 216 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADP 252
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 73 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-L 131
P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 132 NTPSWYTAGELEYFTD-------TTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPN 184
W+ AG + F+D +L + I WA +I G V + N
Sbjct: 127 GEAVWFKAGS-QIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRVAGN 180
Query: 185 NKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGT 243
L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG
Sbjct: 181 GPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 244 GPIDNLIAHLADP 256
GPI+NL HLADP
Sbjct: 239 GPIENLADHLADP 251
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 73 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-L 131
P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 132 NTPSWYTAGELEYFTD-------TTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPN 184
W+ AG + F+D +L + I WA +I G V + N
Sbjct: 127 GEAVWFKAGS-QIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRVAGN 180
Query: 185 NKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGT 243
L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG
Sbjct: 181 GPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 244 GPIDNLIAHLADP 256
GPI+NL HLADP
Sbjct: 239 GPIENLADHLADP 251
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 73 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-L 131
P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 132 NTPSWYTAGELEYFTD-------TTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPN 184
W+ AG + F+D +L + I WA +I G V + N
Sbjct: 127 GEAVWFKAGS-QIFSDGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRVAGN 180
Query: 185 NKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGT 243
L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG
Sbjct: 181 GPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 244 GPIDNLIAHLADP 256
GPI+NL HLADP
Sbjct: 239 GPIENLADHLADP 251
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 126/248 (50%), Gaps = 38/248 (15%)
Query: 28 TKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDF 84
+ + G ++ +RK A + S + P+R + F G +P +L G PGD+
Sbjct: 23 SSSEITGNGRVTMRKTATKA--KPASSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDY 79
Query: 85 GFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-- 141
G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG
Sbjct: 80 GWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 139
Query: 142 -----LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLT 188
L+Y + + ++ +++ +G EG R A P DP+
Sbjct: 140 FSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDPL------- 190
Query: 189 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 248
YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++N
Sbjct: 191 -----YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 243
Query: 249 LIAHLADP 256
L HLADP
Sbjct: 244 LADHLADP 251
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 132/267 (49%), Gaps = 38/267 (14%)
Query: 9 AVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW-- 66
A A+SS S + + G K+ +RK A + +S + P+R +
Sbjct: 4 ATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKA--KPLSSGSPWYGPDRVKYLG 61
Query: 67 -FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 125
F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL
Sbjct: 62 PFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 126 TKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWAD 169
+ G+ W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 170 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAML 229
P DP+ YPGG FDPLG PE EL+ K IKNGRLAM
Sbjct: 181 --GPLGEVVDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKHIKNGRLAMF 224
Query: 230 AVMGAWFQHIYTGTGPIDNLIAHLADP 256
++ G + Q I TG GP++NL HLADP
Sbjct: 225 SMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 130/264 (49%), Gaps = 38/264 (14%)
Query: 12 AISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAADPNRPLW---FP 68
A+SS S ++ + G K+ +RK A + S S+ P+R + F
Sbjct: 7 ALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKA--KPASSSSPWYGPDRVKYLGPFS 64
Query: 69 GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKL 128
G P +L G P D+G+D GL +DPET N + E++HCRWAMLGA G PEL +
Sbjct: 65 GEAP-SYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 123
Query: 129 GI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIK 172
GI W+ AG L+Y + + ++ +++ +G EG R A
Sbjct: 124 GIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--G 181
Query: 173 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 232
P DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++
Sbjct: 182 PLGEVIDPL------------YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMF 227
Query: 233 GAWFQHIYTGTGPIDNLIAHLADP 256
G + Q I TG GP++NL HLADP
Sbjct: 228 GFFVQAIVTGKGPLENLADHLADP 251
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 106/192 (55%), Gaps = 16/192 (8%)
Query: 73 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-L 131
P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+
Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTF 97
Query: 132 NTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPN 184
W+ AG L+Y + + ++ I WA + ++ G V +
Sbjct: 98 GEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----SQVVLMGFVEGYRVGGG 151
Query: 185 NKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 244
G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG G
Sbjct: 152 PLGEGLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 209
Query: 245 PIDNLIAHLADP 256
PI+NL H+ADP
Sbjct: 210 PIENLSDHIADP 221
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 131/260 (50%), Gaps = 26/260 (10%)
Query: 13 ISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSV---SVSAAAAD----PNRPL 65
+++ S+ +S S+AG T L ++ +L K TA R +V +A P+RP
Sbjct: 1 MATASAIQSSSLAGQT---LLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPK 57
Query: 66 WF-PGST-PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPE 123
+ P S P +L G PGD+G+D + +DPET N + E++HCRWAMLGA G PE
Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 124 LLTKLGI-LNTPSWYTAGELEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCV 176
LL K G+ W+ AG + + L + I WA ++ G +
Sbjct: 118 LLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWA-----CQVVLMGLI 172
Query: 177 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWF 236
+ G D PGG FDPLG PE EL+ KEIKNGRLAM ++ G +
Sbjct: 173 EGYRVGGGTLGEGLDPLLPGGA-FDPLGLAD-DPEACAELKVKEIKNGRLAMFSMFGFFV 230
Query: 237 QHIYTGTGPIDNLIAHLADP 256
Q I TG GPI+NL HLADP
Sbjct: 231 QAIVTGKGPIENLYDHLADP 250
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
Query: 73 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-L 131
P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125
Query: 132 NTPSWYTAGE-------LEYFTD--------TTTLFIVEMIFIGWAEGRRWADIIKPGCV 176
W+ AG L+Y + ++ +++ +G+ EG R V
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR---------V 176
Query: 177 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWF 236
P+ G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G +
Sbjct: 177 GGGPL-----GEGLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 229
Query: 237 QHIYTGTGPIDNLIAHLADP 256
Q I TG GPI+NL H+ DP
Sbjct: 230 QAIVTGKGPIENLSDHINDP 249
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 128/244 (52%), Gaps = 40/244 (16%)
Query: 33 LGGKKLKLRKNGATAGTRSVSVSAAA-ADPNRPLW---FPGSTPPEWLDGSLPGDFGFDP 88
LG + +RK +A T+ V+ S + P+R + F G +P +L G PGD+G+D
Sbjct: 30 LGAARFTMRK---SATTKKVASSGSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDT 85
Query: 89 LGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE------ 141
GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG
Sbjct: 86 AGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 145
Query: 142 -LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDV 192
L+Y + + ++ ++I +G EG R A P DP+
Sbjct: 146 GLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVVDPL----------- 192
Query: 193 GYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 252
YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL H
Sbjct: 193 -YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 249
Query: 253 LADP 256
LADP
Sbjct: 250 LADP 253
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 113/214 (52%), Gaps = 34/214 (15%)
Query: 61 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAG 118
P+R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G
Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111
Query: 119 IFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWA 162
PELL + G+ W+ AG L+Y + + ++ +++ +G
Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 171
Query: 163 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIK 222
EG R A P DP+ YPGG FDPLG PE EL+ KE+K
Sbjct: 172 EGYRIAG--GPLGEVVDPL------------YPGGS-FDPLGLAD-DPEAFGELKVKELK 215
Query: 223 NGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 256
GRLAML++ G + Q I TG GP++NL H+ADP
Sbjct: 216 KGRLAMLSMFGFFVQAIVTGKGPLENLADHIADP 249
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 127/253 (50%), Gaps = 40/253 (15%)
Query: 34 GGKKLKLRKNGATAGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFD 87
G K L +R+ T R +V AA + P+R + F + PE+L G PGD+G+D
Sbjct: 9 GLKALNIRQ---TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWD 65
Query: 88 PLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLG--ILNTPSWYTAGE---- 141
GL +DP+T + E++H RWA+LGA GI PELL++ P W+ AG
Sbjct: 66 TAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFA 125
Query: 142 ---LEYFTDTTTL--------FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT 190
L Y + + + V+++ +G AE R A+ G ++
Sbjct: 126 DGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR-ANGGSEGFLDD-----------L 173
Query: 191 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLI 250
D YPGG FDPLG P+ EL+ KEIKNGRLAM + +G + Q I TG GP+ NL
Sbjct: 174 DTLYPGG-PFDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLT 231
Query: 251 AHLADPGHATVFA 263
HLADP FA
Sbjct: 232 DHLADPTVNKAFA 244
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 133/269 (49%), Gaps = 51/269 (18%)
Query: 12 AISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAAD-----PNRPLW 66
A+SSP+ + + G ++ +RK +V A +D P+R +
Sbjct: 7 ALSSPALAGKAVKVAPSSSELFGNGRVSMRK----------TVKAPVSDSPWYGPDRVKY 56
Query: 67 ---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPE 123
F G P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE
Sbjct: 57 LGPFSGEAP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 115
Query: 124 LLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRW 167
LL + G+ W+ AG L+Y + + +++ ++I +G EG R
Sbjct: 116 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRV 175
Query: 168 ADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLA 227
A P DP+ YPGG FDPLG PE+ EL+ KE+KNGRLA
Sbjct: 176 AG--GPLGEIVDPL------------YPGGS-FDPLGLAE-DPERSAELKVKELKNGRLA 219
Query: 228 MLAVMGAWFQHIYTGTGPIDNLIAHLADP 256
M ++ G + Q I TG GP++NL HLADP
Sbjct: 220 MFSMFGFFVQAIVTGKGPLENLADHLADP 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,931,786
Number of Sequences: 539616
Number of extensions: 5249330
Number of successful extensions: 11018
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 10630
Number of HSP's gapped (non-prelim): 164
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)